New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5656486 =	65 (1.080)	6 (0.100)	5/254	NT	8.0%	coding (1209/1998 nt)	tktA	transketolase A
	?	NC_002947	5656524 =	75 (1.290)					coding (1171/1998 nt)	tktA	transketolase A

GCTTCATCAGGGCCGACATGCGCACGGCGTTGCGGGCGTATTCCATGAACATCAGGAAGGTCGCGCCGTAAGGCACCAGGCCACCGTGCAGGGCAACGCCGTTCATGATGGCGGTCATGCCGAACTCGCGCACGCCGTAGAACACGTAGTTGCCGCTGGCGTCATTGGCTTCGACGCCCTTGCAACCTTTCCACAGGGTCAGGTTGGAGCCGGCCAGGTCCGCCGAACCGCCGAGGAACTCGGGCAGCAGCGGGCCGAAGGCGTTCAGGGCGTTCTGGCTGGCCTTGCGGCTGGCGA  >  NC_002947/5656338‑5656634                                                                                                                                                     |                                                                                                                                                     gctTCATCAGGGCCGACATGCGCACGGCGTTGCGGGCGTATTCCATGAACATCAGGAAGGTCGCGCCGTAAGGCACCAGGCCACCGTGCAGGGCAACGCCGTTCATGATGGCGGTCATGCCGAACTCGCGCACGCCGTAGAACACGTAg                                                                                                                                                      >  5:377197/1‑149 (MQ=255)  ctTCATCAGGGCCGACATGCGCACGGCGTTGCGGGCGTATTCCATGAACATCAGGAAGGTCGCGCCGTAAGGCACCAGGCCACCGTGCAGGGCAACGCCGTTCATGATGGCGGTCATGCCGAACTCGCGCACGCCGTAGAACACGTAGt                                                                                                                                                     >  7:183879/1‑149 (MQ=255)      catcaacgaagtggctgccaaaggcgaaaccatcgccagccgcaaggccagccagaacgccctgaacgccttcggcccgctgctgcccgagttcctcggcggttcggcggacctggccggctccaacctgaccctgtggaaagGTTGc                                                                                                                                                  <  3:195504‑M1/5‑1 (MQ=255)           ggCCGACATGCGCACGGCGTTGCGGGCGTATTCCATGAACATCAGGAAGGTCGCGCCGTAAGGCACCAGGCCACCGTGCAGGGCAACGCCGTTCATGATGGCGGTCATGCCGAACTCGCGCACGCCGTAGAACACGTAGTTGCCGCTgg                                                                                                                                            >  5:13051/1‑149 (MQ=255)           ggCCGACATGCGCACGGCGTTGCGGGCGAATTCCATGAACATCAGGAAGGTCGCGCCGTAAGGCACCAGGCCACCGTGCAGGGCAACGCCGTTCATGATGGCGGTCATGCCGAACTCGCGCACGCCGTAGAACACGTAGTTGCCGCTgg                                                                                                                                            >  5:294610/1‑149 (MQ=255)                      gcACGGCGTTGCGGGCGTATTCCATGAACATCAGGAAGGTCGCGCCGTAAGGCACCAGGCCCCCGTGCAGGGCAACGCCGTTCATGATGGCGGTCATGCCGAACTCGCGCACGCCGTAGAACACGTAGTTGCCGCTGGCGTCATTGGCt                                                                                                                                 >  5:295753/1‑149 (MQ=255)                         aaaggcgaaaccatcgccagccgcaaggccagccagaacgccctgaacgccttcggcccgctgctgcccgagttcctcggcggttcggcggacctggccggctccaacctgaccctgtggaaagGt                                                                                                                                                     <  6:177834‑M1/2‑1 (MQ=255)                         aaaggcgaaaccatcgccagccgcaaggccagccagaacgccctgaacgccttcggcccgctgctgcccgagttcctcggcggttcggcggacctggccggctccaacctgaccctgtggaaagGt                                                                                                                                                     >  5:177834‑M1/125‑126 (MQ=255)                                aaaccatcgccagccgcaaggccagccagaacgccctgaacgccttcggcccgctgctgcccgagttcctcggcggttcggcggacctggccggctccaacttgaccctgtggaaagGTTGCAAG‑GGCGTCATTGGCTTCGACGCCCtt                                                                                                                      >  6:32072‑M1/118‑149 (MQ=255)                                          tCCATGAACATCAGGAAGGTCGCGCCGTAAGGCACCAGGCCACCGTGCAGGGCAACGCCGTTCATGATGGCGGTCATGCCGAACTCGCGCACGCCGTAGAACACGTAGTTGCCGCTGGCGTCATTGGCTTCGACGCCCTTGCAACCttt                                                                                                             >  4:302190/1‑149 (MQ=255)                                          cagccgcaaggccagccagaacgccctgaacgccttcggcccgctgctgcccgagttcctcggcggttcggcggacctggccggctccaacctgaccctgtggaaagGtt                                                                                                                                                    >  6:208667‑M1/108‑110 (MQ=255)                                          cagccgcaaggccagccagaacgccctgaacgccttcggcccgctgctgcccgagttcctcggcggttcggcggacctggccggctccaacctgaccctgtggaaagGtt                                                                                                                                                    <  5:208667‑M1/3‑1 (MQ=255)                                           ccATGAACATCAGGAAGGTCGCGCCGTAAGGCACCAGGCCACCGTGCAGGGCAACGCCGTTCATGATGGCGGTCATGCCGAACTCGCGCACGCCGTAGAACACGTAGTTGCCGCTGGCGTCATTGGCTTCGACGCCCTTGCAACCTTTc                                                                                                            >  4:96466/1‑149 (MQ=255)                                            cATGAACATCAGGAAGGTCGCGCCGTAAGGCACCAGGCCACCGTGCAGGGCAACGCCGTTCATGATGGCGGTCATGCCGAACTCGCGCACGCCGTAGAACACGTAGTTGCCGCTGGCGTCATTGGCTTCGACGCCCTTGCAACCTTTc                                                                                                            >  3:274023/1‑148 (MQ=255)                                            cATGAACATCAGGAAGGTCGCGCCGTAAGGCACCAGGACACCGTGCAGGGCAACGCCGTTCATGATGGCGGTCATGCAGAACTCGCGCACGCCGTAGAACACGTAGTTGCCGCTGGCGTCATTGGCTTCGACGCCCTTGCAACCTTTc                                                                                                            >  3:137547/1‑148 (MQ=255)                                             aTGAACATAAGGAAGGTCGCGCCGTAAGGCACCAGGCCACCGTGCAGGGCAACGCCGTTCATGATGGCGGTCATGCCGAACTCGCGCACGCCGTAGAACACGTAGTTGCCGCTCGCGTCATTGCCTTCGACGCCCTTGCAACCTTTCca                                                                                                          >  2:237495/1‑149 (MQ=255)                                               gcaaggccagccagaacgccctgaacgccttcggcccgctgctgcccgagttcctcggcggttcggcggacctggccggctccaacctgaccctgtggaaagGTTGCCGCTGGCGTCATTGGCTTCGACGCCCTTGCAACCTTTCtaca                                                                                                        >  1:159151‑M1/103‑149 (MQ=255)                                               gAACATCAGGAAGGTCGCGCCGTAAGGCACCAGGCCACCGTGCAGGGCAACGCCGTTCATGATGGCGGTCATGCCGAACTCGCGCACGCCGTAGAACACGTAGTTGCCGCTGGCGTCATTGGCTTCGACGCCCTTGCAAc                                                                                                                 <  2:76126/140‑1 (MQ=255)                                               gAACATCAGGAAGGTCGCGCCGTAAGGCACCAGGCCACCGTGCAGGGCAACGCCGTTCATGATGGCGGTCATGCCGAACTCGCGCACGCCGTAGAACACGTAGTTGCCGCTGGCGTCATTGGCTTCGACGCCCTTGCAAc                                                                                                                 >  1:76126/1‑140 (MQ=255)                                                  cATCAGGAAGGTCGCGCCGTAAGGCACCAGGCCACCGTGCAGGGCAACGCCGTTCATGATGGCGGTCATGCCGAACTCGCGCACGCCGTAGAACACGTAGTTGCCGCTGGCGTCATTGGCTTCGACGCCCTTGCAACCTTTCCACAggg                                                                                                     <  8:46655/149‑1 (MQ=255)                                                  cATCAGGAAGGTCGCGCCGTAAGGCACCAGGCCACCGTGCAGGGCAACGCCGTTCATGATGGCGGTCATGCCGAACTCGCGCACGCCGTAGAACACGTAGTTGCCGCTGGCGTCATTGGCTTCGACGCCCTTGCAACCTTTCCACAggg                                                                                                     <  8:52506/149‑1 (MQ=255)                                                         aaGGTCGCGCCGTAAGGCACCAGGCCACCGTGCAGGGCAACGCCGTTCATGATGGCGGTCATGCCGAACTCGCGCACGCCGTAGAACACGTAGTTGCCGCTGGCGTCATTGGCTTCGACGCCCTTGCAACCTTTCCACAGGGTCAGGtt                                                                                              >  8:82316/1‑149 (MQ=255)                                                          aGGTCGCGCCGTAAGGCACCAGGCCACCGTGCAGGGCAACGCCGTTCATGATGGCGGTCATGCCGAACTCGCGCACGCCGTAGAACACGTAGTTGCCGCTGGCGTCATTGGCTTCGACGCCCTTGCAACCTTTCCACAGGGTCAGGTTg                                                                                             <  3:282122/149‑1 (MQ=255)                                                           ggTCGCGCCGTAAGGCACCAGGCCACCGTGCAGGGCAACGCCGTTCATGATGGCGGTCATGCCGAACTCGCGCACGCCGTAGAACACGTAGTTGCCGCTGGCGTCAtt                                                                                                                                     >  6:178290/1‑108 (MQ=255)                                                           ggTCGCGCCGTAAGGCACCAGGCCACCGTGCAGGGCAACGCCGTTCATGATGGCGGTCATGCCGAACTCGCGCACGCCGTAGAACACGTAGTTGCCGCTGGCGTCAtt                                                                                                                                     <  5:178290/108‑1 (MQ=255)                                                            gTCGCGCCGTAAGGCACCAGGCCACCGTGCAGGGCAACGCCGTTCATGATGGCGGTCATGCCGAACTCGCGCACGCCGTAGAACACGTAGTTGCCGCTGGCGTCATTGGCTTCGACGCCCTTGCAACCTTTCCACAGGGTCAGGTTGGa                                                                                           <  3:302190/149‑1 (MQ=255)                                                                cgcCGTAAGGCACCAGGCCACCGTGCAGGGCAACGCCGTTCATGATGGCGGTCATGCCGAACTCGCGCACGCCGTAGAACACGTAGTTGCCGCTGGCGTCATTGGCTTCGACGCCCTTGCAACCTTTCCACAGGGTCAGGTTGGAGCCg                                                                                       >  1:322728/1‑149 (MQ=255)                                                                 gcCGTAAGGCACCAGGCCACCGTGCAGGGCTACGCCGTTGATGATGGCGGTGATGCCTATCTCGCGCACGCCGTTGAACACGTAGTTGCCGCTGGCGTCTTTGGCTTCGACGCCCTTGCAACCTTTCCACAGGGTCAGGTTGGAGCCgg                                                                                      <  5:349417/149‑1 (MQ=255)                                                                  cctgaacgccttcggcccgctgctgcccgagttcctcggcggttcggcggacctggccggctccaacctgaccctgtggaaagGTTGCAAG‑GGCGTCATTGGCTTCGACGCCCtt                                                                                                                      <  6:149060‑M1/32‑1 (MQ=255)                                                                  cctgaacgccttcggcccgctgctgcccgagttcctcggcggttcggcggacctggccggctccaacctgaccctgtggaaagGTTGCAAG‑GGCGTCATTGGCTTCGACGCCCtt                                                                                                                      >  5:149060‑M1/84‑115 (MQ=255)                                                                  ccGTAAGGCACCAGGCCACCGTGCAGGGCAACGCCGTTCATGATGGCGGTCATGCCGAACTCGCGCACGCCGTAGAACACGTAGTTGCCGCTGGCGTCATTGGCTTCGACGCCCTTGCAACCTTTCCACAGGGTCAGGTTGGAGCCGGc                                                                                     <  2:6043/149‑1 (MQ=255)                                                                  ccGTAAGGCACCAGGCCACCGTGCAGGGCAACGCCGTTCATGATGGCGGTCATGCCGAACTCGCGCACGCCGTAGAACACGTAGTTGCCGCTGGCGTCATTGGCTTCGACGCCCTTGCAACCTTTCCACAGGGTCAGGTTGGAGCCGGc                                                                                     <  2:252318/149‑1 (MQ=255)                                                                   ctgaacgccttcggcccgctgctgcccgagttcctcggcggttcggcggacctggccggctccaacctgaccctgtggaaagGTTGCCGCTGGCGTCATTGGCTTCGACGCCCTTGCAACCTTTc                                                                                                            <  3:282313‑M1/43‑1 (MQ=255)                                                                   ctgaacgccttcggcccgctgctgcccgagttcctcggcggttcggcggacctggccggctccaacctgaccctgtggaaagGTTGCCGCTGGCGTCATTGGCTTCGACGCCCTTGCAACCTTTc                                                                                                            >  4:282313‑M1/83‑125 (MQ=255)                                                                   cGTAAGGCACCAGGCCACCGTGCAGGGCAACGCCGTTCATGATGGCGGTCATGCCGAACTCGCGCACGCCGTAGAACACGTAGTTGCCGCTGGCGTCATTGGCTTCGACGCCCTTGCAACCTTTCCACAGGGTCAGGTTGGAGCCGGcc                                                                                    <  4:130573/149‑1 (MQ=255)                                                                     tAAGGCACCAGGCCACCGTGCAGGGCAACGCCGTTCATGATGGCGGTCATGCCGAACTCGCGCACGCCGTAGAACACGTAGTTGCCGCTGGCGTCATTGGCTTCGACGCCCTTGCAACCTTTCCACAGGGTCAGGTTGGAGCCGGCCAg                                                                                  >  1:121193/1‑149 (MQ=255)                                                                       aGGCACCAGGCCACCGTGCAGGGCAACGCCGTTCATGATGGCGGTCATGCCGAACTCGCGCACGCCGTAGAACACGTAGTTGCCGCTGGCGTCATTGGCTTCGACGCCCTTGCAACCTTTCCACAGGGTCAGGTTGGAGCCGGCCAgg                                                                                 <  7:257909/148‑1 (MQ=255)                                                                       aGGCACCAGGCCACCGTGCAGGGCAACGCCGTTCATGATGGCGGTCATGCCGAACTCGCGCACGCCGTAGAACACGTAGTTGCCGCTGGCGTCATTGGCTTCGACGCCCTTGCAACCTTTCCACAGGGTCAGGTTGGAGCCGGCCAGGt                                                                                >  8:336029/1‑149 (MQ=255)                                                                       aGGCACCAGGCCACCGTGCAGGGCAACGCCGTTCATGATGGCGGTCATGCCGAACTCGCGCACGCCGAAGAACACGTAGTTGCCGCTGGCGTCATTGGCTTCGCCGCCCTAGCAACCTTTCCACAGGGTCAGGTTGGAGCCGGCCAGGt                                                                                >  1:174958/1‑149 (MQ=255)                                                                           aCCAGGCCACCGTGCAGGGCAACGCCGTTCATGATGGCGGTCATGCCGAACTCGCGCACGCCGTAGAACACGTAGTTGCCGCTGGCGTCATTGGCTTCGACGCCCTTGCAACCTTTCCACAGGGTCAGGTTGGAGCCg                                                                                       >  8:257376/1‑138 (MQ=255)                                                                           aCCAGGCCACCGTGCAGGGCAACGCCGTTCATGATGGCGGTCATGCCGAACTCGCGCACGCCGTAGAACACGTAGTTGCCGCTGGCGTCATTGGCTTCGACGCCCTTGCAACCTTTCCACAGGGTCAGGTTGGAGCCg                                                                                       <  7:257376/138‑1 (MQ=255)                                                                           aCCAGGCCACCGTGCAGGGCAACGCCGTTCATGATGGCGGTCATGCCGAACTCGCGCACGCCGTAGAACACGTAGTTGCCGCTGGCGTCATTGGCTTCGACGCCCTTGCAACCTTTCCACAGGGTCAGGTTGGAGCCGGCCAGGTccgc                                                                            >  4:318305/1‑149 (MQ=255)                                                                            ccAGGCCACCGTGCAGGGCAACGCCGTTCATGATGGCGGTCATGCCGAACTCGCGCACGCCGTAGAACACGTAGTTGCCGCTGGCGTCATTGGCTTCGACGCCCTTGCAACCTTTCCACAGGGTCAGGTTGGAGCCGGCCAGGTccgcc                                                                           <  5:147925/149‑1 (MQ=255)                                                                              aGGCCACCGTGCAGGGCAACGCCGTTCATGATGGCGGTCATGCCGAACTCGCGCACGCCGTAGAACACGTAGTTGCCGCTGGCGTCATTGGCTTCGACGCCCTTGCAACCTTTCCACAGGGTCAGGTTGGAGCCGGCCAGGTccgccg                                                                          >  2:126202/1‑148 (MQ=255)                                                                                      gTGCAGGGCAACGCCGTTCATGATGGCGGTCATGCCGAACTCGCGCACGCCGTAGAACACGTAGTTGCCGCTGGCGTCATTGGCTTCGACGCCCTTGCAACCTTTCCACAGGGTCAGGTTGGAGCCGGCCAGGTCCGCCGAACCGCCGa                                                                 <  3:96466/149‑1 (MQ=255)                                                                                       tGCAGGGCAACGCCGTTCATGATGGCGGTCATGCCGAACTCGCGCACGCCGTAGAACACGTAGTTGCCGCTGGCGTCATTGGCTTCGACGCCCTTGCAACCTTTCCACAGGGTCAGGTTGGAGCCGGCCAGGTccgcc                                                                           <  2:86151/138‑1 (MQ=255)                                                                                       tGCAGGGCAACGCCGTTCATGATGGCGGTCATGCCGAACTCGCGCACGCCGTAGAACACGTAGTTGCCGCTGGCGTCATTGGCTTCGACGCCCTTGCAACCTTTCCACAGGGTCAGGTTGGAGCCGGCCAGGTccgcc                                                                           >  1:86151/1‑138 (MQ=255)                                                                                        gCAGGGCAACGCCGTTCATGATGGCGGTCATGCCGAACTCGCGCACGACGTAGAACACGTAGTTGCCGCTGGCGTCATTGGCTTCGACGCCCTTGCAACCTTTCCACAGGGTCAGGTTGGAGCCGGCCAGGTCCGCCGAACCGCCGAg                                                                >  1:272632/1‑148 (MQ=255)                                                                                            ggCAACGCCGTTCATGATGGCGGTCATGCCGAACTCGCGCACGCCGTAGAACACGTAGTTGCCGCTGGCGTCATTGGCTTCGACGCCCTTGCAACCTTTCCACAGGGTCAGGTTGGAGCCGGCCAGGTCCGCCGAACCGCCGAGGAACt                                                           >  8:187710/1‑149 (MQ=255)                                                                                              cAACGCCGTTCATGATGGCGGTCATGCCGAACTCGCGCACGCCGTAGAACACGTAGTTGCCGCTGGCGTCATTGGCTTCGACGCCCTTGCAACCTTTCCACAGGGTCAGGTTGGAGCCGGCCAGGTCCGCCGAACCGCCGAGGAACTCg                                                         >  3:125270/1‑149 (MQ=255)                                                                                              cAACGCCGTTCATGATGGCGGTCATGCCGAACTCGCGCACGCCGTAGAACACGTAGGTGCCGCTGGCGTCATTGGCTTCGACGCCCTTGCAACCTTTCCACAGGGTCAGGTTGGAGCCGGCCAGGTCCGCCGAACCGCCGAGGAACTCg                                                         <  6:295753/149‑1 (MQ=255)                                                                                               aaCGCCGTTCATGATGGCGGTCATGCCGAACTCGCGCACGCCGTAGAACACGTAGTTGCCGCTGGCGTCATTGGCTTCGACGCCCTTGCAACCTTTCCACAGGGTCAGGTTGGAGCCGGCCAGGTCCGCCGAACCGCCGAGGAACTCgg                                                        >  2:186201/1‑149 (MQ=255)                                                                                               aaCGCCGTTCATGATGGCGGTCATGCCGAACTCGCGCACGCCGTAGAACACGTAGTTGCCGCTGGCGTCATTGGCTTCGACGCCCTTGCAACCTTTCCACAGGGTCAGGTTGGAGCCGGCCAGGTCCGCCGAACCGCCGAGGAACTCgg                                                        <  6:377197/149‑1 (MQ=255)                                                                                                 cGCCGTTCATGATGGCGGTCATGCCGAACTCGCGCACGCCGTAGAACACGTAGTTGCCGCTGGCGTCATTGGCTTCGACGCCCTTGCAACCTTTCCACAGGGTCAGGTTGGAGCCGGCCAGGTTCGCCGAACCGCCGAGGAACTCGGgc                                                      <  7:82316/149‑1 (MQ=255)                                                                                                  gCCGTTCATGATGGCGGTCATGCCGAACTCGCGCACGCCGTAGAACACGTAGTTGCCGCTGGCGTCATTGGCTTCGACGCCCTTGCAACCTTTCCACAGGGTCAGGTTGGAGCCGGCCAGGTCCGCCGAACCGCCGAGGAACTCggg                                                       >  3:340211/1‑147 (MQ=255)                                                                                                    cGTTCATGATGGCGGTCATGCCGAACTCGCGCACGCCGTAGAACACGTAGTTGCCGCTGGCGTCATTGGCTTCGACGCCCTTGCAACCTTTCCACAGGGTCAGGTTGGAGCCGGCCAGGTCCGCCGAACCGCCGAGGAACTCGGgcag                                                    >  1:19017/1‑148 (MQ=255)                                                                                                        cATGATGGCGGTCATGCCGAACTCGCGCACGCCGTAGAACACGTAGTTGCCGCTGGCGTCATTGGCTTCGACGCCCTTGCAACCTTTCCACAGGGTCAGGTTGGAGCCGGCCAGGTCCGCCGAACCGCCGAGGAACTCGGgc                                                      <  2:673/142‑1 (MQ=255)                                                                                                        cATGATGGCGGTCATGCCGAACTCGCGCACGCCGTAGAACACGTAGTTGCCGCTGGCGTCATTGGCTTCGACGCCCTTGCAACCTTTCCACAGGGTCAGGTTGGAGCCGGCCAGGTCCGCCGAACCGCCGAGGAACTCGGgc                                                      >  1:673/1‑142 (MQ=255)                                                                                                         atgatgGCGGTCATGCCGAACTCGCGCACGCCGTAGAACACGTAGTTGCCGCTGGCGTCATTGGCTTCGACGCCCTTGCAACCTTTCCACAGGGTCAGGTTGGAGCCGGCCAGGTCCGCCGAACCGCCGAGGAACTCGGGCAGCAGCg                                               <  1:186201/148‑1 (MQ=255)                                                                                                                 ggTCATGCCGAACTCGCGCACGCCGTAGAACACGTAGTTGCCGCTGGCGTCATTGGCTTCGACGCCCTTGCAACCTTTCCTGAGGGTCAGGTTGGAGCCGGCCAGGTCCGCCGAAGCGCCGAGGAACTCGGGCAGCAGCGGGCCGAAgg                                      <  1:237495/149‑1 (MQ=255)                                                                                                                 ggTCATGCCGAACTCGCGCACGCCGTAGAACACGTAGTTGCCGCTGGCGTCATTGGCTTCGACGCCCTTGCAACCTTTCCACAGGGTCAGGTTGGAGCCGGCCAGGTCCGCCGAACCGCCGAGGAACTCGGGCAGCAGCGGGCCGAAgg                                      >  6:160972/1‑149 (MQ=255)                                                                                                                   tCATGCCGAACTCGCGCACGCCGTAGAACACGTAGTTGCCGCTGGCGTCATTGGCTTCGACGCCCTTGCAACCTTTCCACAGGGTCAGGTTGGAGCCGGCCAGGTCCGCCGAACCGCCGAGGAACTCGGGCAGCAGCGGGCCGAAGGCg                                    <  2:135912/149‑1 (MQ=255)                                                                                                                         cGAACTCGCGCACGCCGTAGAACACGTAGTTGCCGCTGGCGTCATTGGCTTCGACGCCCTTGCAACCTTTCCACAGGGTCAGGTTGGAGCCGGCCAGGTCCGCCGAACCGCCGAGGAACTCGGGCAGCAGCGGGCCGAAGGCGTTCAgg                              <  4:340211/149‑1 (MQ=255)                                                                                                                           aaCTCGCGCACGCCGTAGAACACGTAGTTGCCGCTGGCGTCATTGGCTTCGACGCCCTTGCAACCTTTCCACAGGGTCAGGTTGGAGGCGGCCAGGTCCGCAGAACCGCCGAGGAACTCGGGCAGCAGCGGGCCTAAGGCGTTCAGGGc                            <  6:294610/149‑1 (MQ=255)                                                                                                                           aaCTCGCGCACGCCGTAGAACACGTAGTTGCCGCTGGCGTCATTGGCTTCGACGCCCTTGCAACCTTTCCACAGGGTCAGGTTGGAGCCGGCCAGGTCCGCCGAACCGCCGAGGAACTCGGGCAGCAGCGGGCCGAAGGCGTTCAgg                              <  1:42829/147‑1 (MQ=255)                                                                                                                           aaCTCGCGCACGCCGTAGAACACGTAGTTGCCGCTGGCGTCATTGGCTTCGACGCCCTTGCAACCTTTCCACAGGGTCAGGTTGGAGCCGGCCAGGTCCGCCGAACCGCCGAGGAACTCGGGCAGCAGCGGGCCGAAGGCGTTCAgg                              >  2:42829/1‑147 (MQ=255)                                                                                                                              tCGCGCACGCCGTAGAACACGTAGTTGCCGCTGGCGTCATTGGCTTCGACGCCCTTGCAACCTTTCCACAGGGTCAGGTTGGAGCCGGCCAGGTCCGCCGAAccgc                                                                    <  7:124732/106‑1 (MQ=255)                                                                                                                              tCGCGCACGCCGTAGAACACGTAGTTGCCGCTGGCGTCATTGGCTTCGACGCCCTTGCAACCTTTCCACAGGGTCAGGTTGGAGCCGGCCAGGTCCGCCGAAccgc                                                                    >  8:124732/1‑106 (MQ=255)                                                                                                                              tCGCGCACGCCGTAGAACACGTAGTTGCCGCTGGCGTCATTGGCTTCGACGCCCTTGCAACCTTTCCACAGGGTCAGGTTGGAGCCGGCCAGGTCCGCCGAACCGCCGAGGAACTCGGGCAGCAGCGGGCCGAAGGCGTTCAGGGCGtt                         >  7:312411/1‑149 (MQ=255)                                                                                                                                gcgcACGCCGTAGAACACGTAGTTGCCGCTGGCGTCATTGGCTTCGACGCCCTTGCAACCTTTCCACAGGGTCAGGTGGGAGCCGGCCAGGTCCGCCGAACCGCCGAGGAACTCGGGCAGCAGCGGGCCGAAGGCGTTCAGGGCGTTct                       <  7:336029/149‑1 (MQ=255)                                                                                                                                  gcACGCCGTAGAACACGTAGTTGCCGCTGGCGTCATTGGCTTCGACGCCCTTGCAACCTTTCCACAGGGTCAGGTTGGAGCCGGCCAGGTCCGCCGAACCGCCGa                                                                 <  3:367205/105‑1 (MQ=255)                                                                                                                                  gcACGCCGTAGAACACGTAGTTGCCGCTGGCGTCATTGGCTTCGACGCCCTTGCAACCTTTCCACAGGGTCAGGTTGGAGCCGGCCAGGTCCGCCGAACCGCCGa                                                                 >  4:367205/1‑105 (MQ=255)                                                                                                                                    aCGCCGTAGAACACGTAGTTGCCGCTGGCGTCATTGGCTTCGACGCCCTTGCAACCTTTCCACAGGGTCAGGTTGGAGCCGGCCAGGTCCGCCGAACCGCCGAGGAACTCGGGCAGCAGCGGGCCGAAGGCGTTCAGGGCGTTctggct                   >  4:20035/1‑149 (MQ=255)                                                                                                                                     agtcGTAGAACACGTAGTTGCCGCTGGCGTCATTGGCTTCGACGCCCTTGCAACCTTTCCACAGGGTCAGGTTGGAGCCGGCCAGGTCCGCCGAACCGCCGAGGAACTCGGGCAGCAGCGGGCCGAAGGCGTTCAGGGCGTTctggct                   <  1:323656/145‑1 (MQ=255)                                                                                                                                         gTAGAACACGTAGTTGCCGCTGGCGTCATTGGCTTCGACGCCCTTGCAACCTTTCCACAGGGTCAGGTTGGAGCCGGCCAGGTCCGCCGAACCGCCGAGGAACTCGGGCAGCAGCGGGCCGAAGGCGTTCAGGGCGTTCTGGCTGGCCt              >  2:39178/1‑149 (MQ=255)                                                                                                                                         gTAGAACACGTAGTTGCCGCTGGCGTCATTGGCTTCGACGCCCTTGCAACCTTTCCACAGGGTCAGGTTGGAGCCGGCCAGGTCCGCCGAACCGCCGAGGAACTCGGGCAGCAGCGGGCCGAAGGCGTTCAGGGCGTTCTGGCTGGCCt              >  6:220514/1‑149 (MQ=255)                                                                                                                                              acacGTAGTTGCCGCTGGCGTCATTGGCTTCGACGCCCTTGCAACCTTTCCACAGGGTCAGGTTGGAGCCGGCCAGGTCCGCCGAACCGCCGAGGAACTCGGGCAGCAGCGGGCCGAAGGCGTTCAGGGCGTTCTGGCTGGCCTTGCg          <  8:312411/148‑1 (MQ=255)                                                                                                                                               cacGTAGTTGCCGCTGGCGTCATTGGCTTCGACGCCCTTGCAACCTTTCCACAGGGTCAGGTTGGAGCCGGCCAGGTCCGCCGAACCGCCGAGGAACTCGGGCAGCAGCGGGCCGAAGGCGTTCAGGGCGTTCTGGCTGGCCTTGCGGc        >  2:163420/1‑149 (MQ=255)                                                                                                                                                 cGTAGTTGCCGCTGGCGTCATTGGCTTCGACGCCCTTGCAACCTTTCCACAGGGTCAGGTTGGAGCCGGCCAGGTCCGCCGAACCGCCGAGGAACTCGGGCAGCAGCGGGCCGAAGGCGTTCAGGGCGTTCTGGCTGGCCTTGCGGCTg      <  5:160972/149‑1 (MQ=255)                                                                                                                                                     GTTGCCGCTGGCGTCATTGGCTTCGACGCCCTTGCAACCTTTCCACAGGGTCAGGTTGGAGCCGGCCAGGTCCGCCGAACCGCCGAGGAACTCGGGCAGCAGCGGGCCGAAGGCGTTCAGGGCGTTCTGGCTGGCCTTGCGGCTGGCGa  <  5:323502‑M1/149‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                     GCTTCATCAGGGCCGACATGCGCACGGCGTTGCGGGCGTATTCCATGAACATCAGGAAGGTCGCGCCGTAAGGCACCAGGCCACCGTGCAGGGCAACGCCGTTCATGATGGCGGTCATGCCGAACTCGCGCACGCCGTAGAACACGTAGTTGCCGCTGGCGTCATTGGCTTCGACGCCCTTGCAACCTTTCCACAGGGTCAGGTTGGAGCCGGCCAGGTCCGCCGAACCGCCGAGGAACTCGGGCAGCAGCGGGCCGAAGGCGTTCAGGGCGTTCTGGCTGGCCTTGCGGCTGGCGA  >  NC_002947/5656338‑5656634

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.