New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	167936 =	69 (1.150)	5 (0.090)	5/254	NT	6.4%	coding (308/918 nt)	gcdR	gcdH transcriptional regulator
	?	NC_002947	167990 =	80 (1.380)					coding (254/918 nt)	gcdR	gcdH transcriptional regulator

CAGTCCGCATCACCAAAATAGATGGCGGCATCGAAGGTAGTGTCGGCAAACAGGAATGGCCGGGTGCGGTTGGTGAGGTTGACTGTGACCTCCGGGTGGCGCTGCTGGAAGTCCTTGAGCCGTGGTAGCAGCCATTGAGTGCCAAACGTCGGAACTACCGCCAGCTCG‑ATCACATTGGCGCCTTGCTGGCGCATTACCGACAAGGTATCGCGCTCCACAGCGTCCAGTTGGGCCGCCACCTGGCGACTGTAGGACAGGCCGGCTTCGGTCAGCCTTACGCCGCGGCGCGAGCGACG  >  NC_002947/167789‑168084                                                                                                                                                    |                                                                                                                                                      cgtctgtcggcagatcggtggcctggaagcgttccttaatgtggaactgttccgtcgctcgcgccgcggcgtaaggctgaccgaagccggcctgtcctacagtcgccaggtggcggcccaactggacgctgtggagcgcgataccttGt                                                                                                                                                      >  7:87691‑M1/148‑149 (MQ=255)   tctgtcggcagatcggtggcctggaagcgttccttaatgtggaactgttccgtcgctcgcgccgcggcgtaaggctgaccgaagccggcctgtcctacagtcgccaggtggcggcccaactggacgctgtggagcgcgataccttGTCg                                                                                                                                                    >  4:101349‑M1/146‑149 (MQ=255)   tctgtcggcagatcggtggcctggaagcgttccttaatgtggaactgttccgtcgctcgcgccgcggcgtaaggctgaccgaagccggcctgtcctacagtcgccaggtggcggcccaactggacgctgtggagcgcgataccttGTCg                                                                                                                                                    >  1:237782‑M1/146‑149 (MQ=255)   tctgtcggcagatcggtggcctggaagcgttccttaatgtggaactgttccgtcgctcgcgccgcggcgtaaggctgaccgaagccggcctgtcctacagtcgccaggtggcggcccaactggacgctgtggagcgcgataccttGTCg                                                                                                                                                    >  5:199656‑M1/146‑149 (MQ=255)    ctgtcggcagatcggtggcctggaagcgttccttaatgtggaactgttccgtcgctcgcgccgcggcgtaaggctgaccgaagccggcctgtcctacagtcgccaggtggcggcccaactggacgctgtggagcgcgataccttGTCgg                                                                                                                                                   <  4:349053‑M1/5‑1 (MQ=255)    ctgtcggcagatcggtggcctggaagcgttccttaatgtggaactgttccgtcgctcgcgccgcggcgtaaggctgaccgaagccggcctgtcctacagtcgccaggtggcggcccaactggacgctgtggagcgcgataccttGTCgg                                                                                                                                                   <  2:287812‑M1/5‑1 (MQ=255)      cGCATCACCAAAATAGATGGCGGCATCGAAGGTAGTGTCGGCAAACAGGAATGGCCGGGTGCGGTTGGTGAGGTTGACTGTGACCTCCGGGTGGCGCTGCTGGAAGTCCTTGAGCCGTGGTAGCAGCCATTGAGTGCCAAACGTCGGaa                                                                                                                                                 <  1:177233/149‑1 (MQ=255)      cGCATCACCAAAATAGATGGCGGCATCGAAGGTAGTGTCGGCAAACAGGAATGGCCGGGTGCGGTTGGTGAGGTTGACTGTCACCTCCGGGTGGCGCTGCTGGAAGTCCTTGAGCCGTGGTAGCAGCCATTGAGTGCCAAACGTCGGaa                                                                                                                                                 <  3:324895/149‑1 (MQ=255)       tcggcagatcggtggcctagaagcgttccttaatgtggaactgttccgtcgctcgcgccgcggcgtaaggctgaccgaagccggcctgtcctacagtcgccaggtggcggcccaactggacgctgtggagcgcgataccttGTCgg                                                                                                                                                   >  5:110437‑M1/142‑146 (MQ=255)        cATCACCAAAATAGATGGCGGCATCGAAGGTAGTGTCGGCAAACAGGAATGGCCGGGTGCGGTTGGTGAGGTTGACTGTGACCTCCGGGTGGCGCTGCTGGAAGTCCTTGAGCCGTGGTAGCAGCCATTGAGTGCCAAACGTCGGAACt                                                                                                                                               <  1:169655/149‑1 (MQ=255)          tCACCAAAATAGATGGCGGCATCGAAGGTAGTGTCGGCAAACAGGAATGGCCGGGTGCGGTTGGTGAGGTTGACTGTGACCTCCGGGTGGCGCTGCTGGAAGTCCTTGAGCCGTGGTAGCAGCCATTGAGTGCCAAACGTCGGAACTAc                                                                                                                                             >  1:284897/1‑149 (MQ=255)            aCCAAAATAGATGGCGGCATCGAAGGTAGTGTCGGCAAACAGGAATGGCCGGGTGCGGTTGGTGAGGTTGACTGTGACCTCCGGGTGGCGCTGCTGGAAGTCCTTGAGCCGTGGTAGCAGCCATTGAGTGCCAAACGTCGGAACTAcc                                                                                                                                            >  1:145254/1‑148 (MQ=255)            aCCAAAATAGATGGCGGCATCGAAGGTAGTGTCGGCAAACAGGAATGGCCGGGTGCGGTTGGTGAGGTTGACTGTGACCTCCGGGTGGCGCTGCTGGAAGTCCTTGAGCCGTGGTAGCAGCCATTGAGTGCCAAACGTCGGAACTAcc                                                                                                                                            <  2:145254/148‑1 (MQ=255)              cAAAATAGATGGCGGCATCGAAGGTAGTGTCGGCAAACAGGCATGGCCGGGTGCGGTTGGTGAGGTTGACTGTGACGTCCGGGTGGCGGTGCTGGAAGTCGTTGAGCCGGGGAAGCAGCCATTGAGTGCCTAACGTCGGACCTACCGcc                                                                                                                                         >  6:364091/1‑149 (MQ=255)                aaaTAGATGGCGGCATCGAAGGTAGTGTCGGCAAACAGGAATGGCCGGGTGCGGTTGGTGAGGTTGACTGTGACCTCCGGGTGGCGCTGCTGGAAGTCCTTGAGCCGTGGTAGCAGCCATTGAGTGCCAAACGTCGGAACTACCGCCAg                                                                                                                                       <  1:2587/149‑1 (MQ=255)                         gcggcATCGAAGGTAGTGTCGGCAAACAGGAATGGCCGGGTGCGGTTGGTGAGGTTGACTGTGACCTCCGGGTGGCGCTGCTGGAAGTCCTTGAGCCGTGGTAGCAGCCATTGAGTGCCAAACGTCGGAACTACCGCCAGCTCG‑ATcac                                                                                                                             <  1:304113/149‑1 (MQ=255)                          cggcATCGAAGGTAGTGTCGGCAAACAGGAATGGCCGGGTGCGGTTGGTGAGGTTGACTGTGACCTCCGGGTGGCGCTGCTGGAAGTCCTTGAGCCGTGGTAGCAGCCATTGAGTGCCAAACGTCGGAACTACCGCCAGCTCG‑ATcaca                                                                                                                            >  3:306289/1‑149 (MQ=255)                             cATCGAAGGTAGTGTCGGCAAACAGGAATGGCCGGGTGCGGTTGGTGAGGTTGACTGTGACCTCCGGGTGGCGCTGCTGGAAGTCCTTGAGCCGTGGTAGCAGCCATTGAGTGCCAAACGTCGGAACTACCGCCAGCTCG‑ATCACATTg                                                                                                                         >  6:340454/1‑149 (MQ=255)                                     gTAGTGTCGGCAAACAGGAATGGCCGGGTGCGGTTGGTGAGGTTGACTGTGACCTCCGGGTGGCGCTGCTGGAAGTCCTTGAGCCGTGGTAGCAGCCATTGAGTGCCAAACGt                                                                                                                                                      <  1:259182/113‑1 (MQ=255)                                     gTAGTGTCGGCAAACAGGAATGGCCGGGTGCGGTTGGTGAGGTTGACTGTGACCTCCGGGTGGCGCTGCTGGAAGTCCTTGAGCCGTGGTAGCAGCCATTGAGTGCCAAACGt                                                                                                                                                      >  2:259182/1‑113 (MQ=255)                                     gTAGTGTCGGCAAACAGGAATGGCCGGGTGCGGTTGGTGAGGTTGACTGTGACCTCCGGGTGGCGCTGCTGGAAGTCCTTGAGCCGTGGTAGCAGCCATTGAGTGCCAAACGTCGGAACTACCGCCAGCTCG‑ATCACATTGGCGCCTTg                                                                                                                 <  5:9221/149‑1 (MQ=255)                                        tgtggaactgttccgtcgctcgcgacgcggcgtaaggctgaccgaagccggcctgtcctacagtcgccaggtggcggcccaactggacgctgtggagcgcgataccttGTCGGTAATGC‑GCCAGCTCG‑ATCACATTGGCGCCTTGCTgg                                                                                                             <  1:120447‑M1/41‑1 (MQ=255)                                            gaactgttccgtcgctcgcgccgcggcgtaaggctgacggaagccggcctgtcctacagtcgccaggtggcggcccaactggacgctgtggagcgcgataccttGTCGGTAATGC‑GCCAGCTCG‑ATCACATTGGCGCCTTGCTGGCGCa                                                                                                         >  2:120447‑M1/105‑149 (MQ=255)                                              gCAAACAGGAATGGCCGGGTGCGGTTGGTGAGGTTGACTGTGACCTCCGGGTGGCGCTGCTGGAAGTCCTTGAGCCGTGGTAGCAGCCATTGAGTGCCAAACGTCGGAACTACCGCCAGCTCG‑ATCACATTGGCGCCTTGCt                                                                                                               <  2:142788/142‑1 (MQ=255)                                              gCAAACAGGAATGGCCGGGTGCGGTTGGTGAGGTTGACTGTGACCTCCGGGTGGCGCTGCTGGAAGTCCTTGAGCCGTGGTAGCAGCCATTGAGTGCCAAACGTCGGAACTACCGCCAGCTCG‑ATCACATTGGCGCCTTGCt                                                                                                               >  1:142788/1‑142 (MQ=255)                                              gCAAACAGGAATGGCCGGGTGCGGTTGGTGAGGTTGACTGTGACCTCCGGGTGGCGCTGCTGGAAGTCCTTGAGCCGTGGTAGCAGCCATTGAGTGCCAAACGTCGGAACTACCGCCAGCTCG‑ATCACATTGGCGCCTTGCTGGCGCAt                                                                                                        >  7:323392/1‑149 (MQ=255)                                                aaaCAGGAATGGCCGGGTGCGGTTGGTGAGGTTGACTGTGACCTCCGGGTGGCGCTGCTGGAAGTCCTTGAGCCGTGGTAGCAGCCATTGAGTGCCAAACGTCGGAACTACCGCCAGCTCG‑ATCACATTGGCGCCTTGCTGGCGCATTa                                                                                                      <  2:124113/149‑1 (MQ=255)                                                 aaCAGGAATGGCCGGGTGCGGTTGGTGAGGTTGACTGTGACCTCCGGGTGGCGCTGCTGGAAGTCCTTGAGCCGTGGTAGCAGCCATTGAGTGCCAAACGTCGGAACTACCGCCAGCTCG‑ATCACATTGGCGCCTTGCTGGCGCATTAc                                                                                                     >  7:340756/1‑149 (MQ=255)                                                         tGGCCGGGTGCGGTTGGTGAGGTTGACTGTGACCTCCGGGTGGCGCTGCTGGAAGTCCTTGAGCCGTGGTAGCAGCCATTGAGTGCCAAACGTCGGAACTACCGCCAGCTCG‑ATCACATTGGCGCCTTGCTGGCGCATTACCGACAAgg                                                                                             >  3:63393/1‑149 (MQ=255)                                                         gctcgcgccgcggcgtaaggctgaccgaagccggcctgtcctacagtcgccaggtggcggcccaactggacgctgtggagcgcgataccttGTCGGAACTACCGCCAGCTCG‑ATCACATTGGCGCCTTGCTGGCGCATTACCGACAAg                                                                                              >  3:70398‑M1/92‑148 (MQ=255)                                                           gCCGGGTGCGGTTGGTGAGGTTGACTGTGACCTCCGGGTGGCGCTGCTGGAAGTCCTTGAGCCGTGGTAGCAGCCATTGAGTGCCAAACGTCGGAACTACCGCCAGCTCG‑ATCACATTGGCGCCTTGCTGGCGCATTACCGACAAGGTa                                                                                           >  2:245848/1‑149 (MQ=255)                                                           gCCGGGTGCGGTTGGTGAGGTTGACTGTGACCTCCGGGTGGCGCTGCTGGAAGTCCTTGAGCCGTGGTAGCAGCCATTGAGTGCCAAACGTCGGAACTACCGCCAGCTCG‑ATCACATTGGCGCCTTGCTGGCGCATTACCGACAAGGTa                                                                                           >  2:251026/1‑149 (MQ=255)                                                           gCCGGGTGCGGTTGGTGAGGTTGACTGTGACCTCCGGGTGGCGCTGCTGGAAGTCCTTGAGCCGTGGTAGCAGCCATTGAGTGCCAAACGTCGGAACTACCGCCAGCTCG‑ATCACATTGGCGCCTTGCTGGCGCATTACCGACAAGGTa                                                                                           <  5:340454/149‑1 (MQ=255)                                                             cGGGTGCGGTTGGTGAGGTTGACTGTGACCTCCGGGTGGCGCTGCTGGAAGTCCTTGAGCCGTGGTAGCAGCCATTGAGTGCCAAACGTCGGAACTACCGCCAGCTCG‑ATCACATTGGCGCCTTGCTGGCGCATTACCGACAAGGTATc                                                                                         <  4:306289/149‑1 (MQ=255)                                                             cGGGTGCGGTTGGTGAGGTTGACTGTGACCTCCGGGTGGCGCTGCTGGAAGTCCTTGAGCCGTGGTAGCAGCCATTGAGTGCCAAACGTCGGAACTACCGCCAGCTCG‑ATCACATTGGCGCCTTGCTGGCGCATTACCGACAAGGTATc                                                                                         >  4:122829/1‑149 (MQ=255)                                                                gTGCGGTTGGTGAGGTTGACTGTGACCTCCGGGTGGCGCTGCTGGAAGTCCTTGAGCCGTGGTAGCAGCCATTGAGTGCCAAACGTCGGAACTACCGCCAGCTCG‑ATCACATTGGCGCCTTGCTGGCGCATTACCGACAAGGTATcgcg                                                                                      >  6:38520/1‑149 (MQ=255)                                                                   cGGTTGGTGAGGTTGACTGTGACCTCCGGGTGGCGCTGCTGGAAGTCCTTGAGCCGTGGTAGCAGCCATTGAGTGCCAAACGTCGGAACTACCGCCAGCTCG‑ATCACATTGGCGCCTTGCTGGCGCATTACCGACAAGGTATCGCGCTc                                                                                   <  8:323392/149‑1 (MQ=255)                                                                      ttGGTGAGGTTGACTGTGACCTCCGGGTGGCGCTGCTGGAAGTCCTTGAGCCGTGGTAGCAGCCATTGAGTGCCAAACGTCGGAACTACCGCCAGCTCG‑ATCACATTGGCGCCTTGCTGGCGCATTACCGACAAGGTATcg                                                                                        >  7:265951/1‑141 (MQ=255)                                                                      ttGGTGAGGTTGACTGTGACCTCCGGGTGGCGCTGCTGGAAGTCCTTGAGCCGTGGTAGCAGCCATTGAGTGCCAAACGTCGGAACTACCGCCAGCTCG‑ATCACATTGGCGCCTTGCTGGCGCATTACCGACAAGGTATcg                                                                                        <  8:265951/141‑1 (MQ=255)                                                                      ttGGTGAGGTTGACTGTGACCTCCGGGTGGCGCTGCTGGAAGTCCTTGAGCCGTGGTAGCAGCCATTGAGTGCCAAACGTCGGAACTACCGCCAGCTCG‑ATCACATTGGCGCCTTGCTGGCGCATTACCGACAAGGTATCGCGCTCca                                                                                 >  1:107166/1‑148 (MQ=255)                                                                        ggTGAGGTTGACTGTGACCTCCGGGTGGCGCTGCTGGAAGTCCTTGAGCCGTGGTAGCAGCCATTGAGTGCCAAACGTCGGAACTACCGCCAGCTCG‑ATCACATTGGCGCCTTGCTGGCGCATTACCGACAAGGTATCGCGCTCcaca                                                                               <  2:341952/148‑1 (MQ=255)                                                                          tGAGGTTGACTGTGACCTCCGGGTGGCGCTGCTGGAAGTCCTTGAGCCGTGGTAGCAGCCATTGAGTGCCAAACGTCGGAACTACCGCCAGCTCG‑ATCACATTGGCGCCTTGCTGGCGCATTACCGAc                                                                                                 <  8:173210/128‑1 (MQ=255)                                                                          tGAGGTTGACTGTGACCTCCGGGTGGCGCTGCTGGAAGTCCTTGAGCCGTGGTAGCAGCCATTGAGTGCCAAACGTCGGAACTACCGCCAGCTCG‑ATCACATTGGCGCCTTGCTGGCGCATTACCGAc                                                                                                 >  7:173210/1‑128 (MQ=255)                                                                          tGAGGTTGACTGTGACCTCCGGGTGGCGCTGCTGGAAGTCCTTGAGCCGTGGTAGCAGCCATTGAGTGCCAAACGTCGGAACTACCGCCAGCTCG‑ATCACATTGGCGCCTTGCTGGCGCATTACCGACAAGGTATCGCGCTCCACAGCg                                                                            >  2:335765/1‑149 (MQ=255)                                                                              gTTGACTGTGACCTCCGGGTGGCGCTGCTGGAAGTCCTTGAGCCGTGGTAGCAGCCATTGAGTGCCAAACGTCGGAACTACCGCCAGCTCG‑ATCACATTGGCGCCTTGCTGGCGCATTACCGACAAGGTATCGCGCTCCACAGCGTc                                                                          >  4:73365/1‑147 (MQ=255)                                                                                   cTGTGACCTCCGGGTGGCGCTGCTGGAAGTCCTTGAGCCGTGGTAGCAGCCATTGAGTGCCAAACGTCGGAACTACCGCCAGCTCG‑ATCACATTGGCGCCTTGCTGGCGCATTACCGACAAGGTATCGCGCTCCACAGCGTCCAGTTgg                                                                   <  3:132990/149‑1 (MQ=255)                                                                                     gtgACCTCCGGGTGGCGCTGCTGGAAGTCCTTGAGCCGTGGTAGCAGCCATTGAGTGCCAAACGTCGGAACTACCGCCAGCTCG‑ATCACATTGGCGCCTTGCTGGCGCATTACCGACAAGGTATCGCGCTc                                                                                   <  6:46503/131‑1 (MQ=255)                                                                                     gtgACCTCCGGGTGGCGCTGCTGGAAGTCCTTGAGCCGTGGTAGCAGCCATTGAGTGCCAAACGTCGGAACTACCGCCAGCTCG‑ATCACATTGGCGCCTTGCTGGCGCATTACCGACAAGGTATCGCGCTc                                                                                   >  5:46503/1‑131 (MQ=255)                                                                                     gtgACCTCCGGGTGGCGCTGCTGGAAGTCCTTGAGCCGTGGTAGCAGCCATTGAGTGCCAAACGTCGGAACTACCGCCAGCTCG‑ATCACATTGGCGCCTTGCTGGCGCATTACCGACAAGGTATCGCGCCCCACAGCGTCCAGTTGGgc                                                                 >  2:129333/1‑149 (MQ=255)                                                                                      tgACCTCCGGGTGGCGCTGCTGGAAGTCCTTGAGCCGTGGTAGCAGCCATTGAGTGCCAAACGTCGGAACTACCGCCAGCTCG‑ATCACATTGGCGCCTTGCTGGCGCATTACCGACAAGGTATCGCGCTCCACAGCGTCCAGTTGGgcc                                                                >  8:113187/1‑149 (MQ=255)                                                                                      tgACCTCCGGGTGGCGCTGCTGGAAGTCCTTGAGCCGTGGTAGCAGCCATTGAGTGCCAAACGTCGGAACTACCGCCAGCTCG‑ATCACATTGGCGCCTTGCTGGCGCATTACCGACAAGGTATCGCGCTCCACAGCGTCCAGTTGGgcc                                                                <  4:63393/149‑1 (MQ=255)                                                                                        aCCTCCGGGTGGCGCTGCTGGAAGTCCTTGAGCCGTGGTAGCAGCCATTGAGTGCCAAACGTCGGAACTACCGCCAGCTCG‑ATCACATTGGCGCCTTGCTGGCGCATTACCGCAAAGGAATCGCGCTCAACAGCGTCCAGTTGGgccgc                                                              >  3:297451/1‑149 (MQ=255)                                                                                           tCCGGGTGGCGCTGCTGGAAGTCCTTGAGCCGTGGTAGCAGCCATTGAGTGCCAAACGTCGGAACTACCGCCAGCTCG‑ATCACATTGGCGCCTTGCTGGCGCATTACCGACAAGGTATCGCGCTCCACAGCGTCCAGTTGGGCCGCCAc                                                           >  1:222791/1‑149 (MQ=255)                                                                                            ccGGGTGGCGCTGCTGGAAGTCCTTGAGCCGTGGTAGCAGCCATTGAGTGCCAAACGTCGGAACTACCGCCAGCTCG‑ATCACATTGGCGCCTTGCTGGCGCATTACCGACAAGGTATCGCGCTCCACAGCGTCCAGTTGGGCCGCCAcc                                                          >  7:321811/1‑149 (MQ=255)                                                                                                  gccgcTGCTGCAAGTCCTAGAGCCGTGGTAGCAGCCATTGAGTGCCAACCGTCGGAACTACCGCCAGCTCG‑ATCACCTTGGCGCCTTGCTGGCGCATTACCGACAAGGTATCGCGCTCCACAGCGTCCAGTTGGGCCGCCACCTGGCGa                                                    <  8:256615/147‑1 (MQ=255)                                                                                                    cgcTGCTGGAAGTCCTTGAGCCGTGGTAGCAGCCATTGAGTGCCAAACGTCGGAACTACCGCCAGCTCG‑ATCACATTGGAGCCATGCTGGCGCATTACCGACAAGGTAACCCGCACCAAAGCGTCCACTTGGGCAGCCACCTGTCGAc                                                   >  7:136041/1‑148 (MQ=255)                                                                                                     gctgctGGAAGTCCTTGAGCCGTGGTAGCAGCCATTGAGTGCCAAACGTCGGAACTACCGCCAGCTCG‑ATCACATTGGCGCCTTGCTGGCGCATTACCGACAAGGTATCGCGCTCCACAGCGTCCAGTTGGGCCGCCACCTGGCGACTg                                                 <  2:222791/149‑1 (MQ=255)                                                                                                     gctgctGGAAGTCCTTGAGCCGTGGTAGCAGCCATTGAGTGCCAAACGTCGGAACTACCGCCAGCTCG‑ATCACATTGGCGCCTTGCTGGCGCATTACCGACAAGGTATCGCGCTCCACAGCGTCCAGTTGGGCCGCCACCTGGCGACTg                                                 <  6:159844/149‑1 (MQ=255)                                                                                                      ctgctgGAAGTCCTTGAGCCGTGGTAGCAGCCATTGAGTGCCAAACGTCGGAACTACCGCCAGCTCG‑ATCACATTGGCGCCTTGCTGGCGCATTACCGACAAGGTATCGCGCTCCACAGCGTCCAGTTGGGCCGCCACCTGGCGACTGt                                                <  1:251026/149‑1 (MQ=255)                                                                                                      ctgctgGAAGTCCTTGAGCCGTGGGAGCAGCCATTGAGTGCCAAACGTCGGAACTACCGCCAGCTCG‑ATCACATTGGCGCCTTGCTGGCGCATTACCGACAAGGTATCGCGCTCCACAGCGTCCAGTTGGGCCGCCACCTGGCGACTGt                                                <  1:245848/149‑1 (MQ=255)                                                                                                            gAAGTCCTTGAGCCGTGGTAGCAGCCATTGAGTGCCAAACGTCGGAACTACCGCCAGCTCG‑ATCACATTGGCGCCTTGCTGGCGCATTACCGACAAGGTATCGCGCTCCACAGCGTCCAGTTGGgcc                                                                >  5:300801/1‑127 (MQ=255)                                                                                                            gAAGTCCTTGAGCCGTGGTAGCAGCCATTGAGTGCCAAACGTCGGAACTACCGCCAGCTCG‑ATCACATTGGCGCCTTGCTGGCGCATTACCGACAAGGTATCGCGCTCCACAGCGTCCAGTTGGgcc                                                                <  6:300801/127‑1 (MQ=255)                                                                                                              gtggcggcccaactggacgctgtggagcgcgataccttGTCGGAACTACCGCCAGCTCG‑ATCACATTGGCGCCTTGCTGGCGCATTACCGACaa                                                                                               <  5:345935‑M1/56‑1 (MQ=255)                                                                                                              gtggcggcccaactggacgctgtggagcgcgataccttGTCGGAACTACCGCCAGCTCG‑ATCACATTGGCGCCTTGCTGGCGCATTACCGACaa                                                                                               >  6:345935‑M1/39‑94 (MQ=255)                                                                                                               gTCCTTGAGCCGTGGTAGCAGCCATTGAGTGCCAAACGTCGGAACTACCGCCAGCTCG‑ATCACATTGGCGCCTTGCTGGCGCATTACCGACAAGGTATCGCGCTCCACAGCGTCCAGTTGGGCCGCCACCTGGCGACTGTAGGACAGGc                                       <  3:122829/149‑1 (MQ=255)                                                                                                                tCCTTGAGCCGTGGTAGCAGCCATTGAGTGCCAAACGTCGGAACTACCGCCAGCTCG‑ATCACATTGGCGCCTTGCTGGCGCATTACCGACAAGGTATCGCGCTCCACAGCGTCCAGTTGGGCCGCCACCTGGCGACTGTAGGACAGGc                                       <  1:333457/148‑1 (MQ=255)                                                                                                                tCCTTGAGCCGTGGTAGCAGCCATTGAGTGCCAAACGTCGGAACTACCGCCAGCTCG‑ATCACATTGGCGCCTTGCTGGCGCATTACCGACAAGGTATCGCGCTCCACAGCGTCCAGTTGGGCCGCCACCTGGCGACTGTAGGACAGGc                                       >  2:333457/1‑148 (MQ=255)                                                                                                                  cTTGAGCCGTGGTAGCAGCCATTGAGTGCCAAACGTCGGAACTACCGCCAGCTCG‑ATCACATTGGCGCCTTGCTGGCGCATTACCGACAAGGTATCGCGCTCCACAGCGTCCAGTTGGGCCGCCACCTGGCGACTGTAGGACAGGCCgg                                    >  8:158722/1‑149 (MQ=255)                                                                                                                     gAGCCGTGGTAGCAGCCATTGAGTGCCAAACGTCGGAACTACCGCCAGCTCGAATCACATTGGCGCCTTGCTGGCGCATTACCGACAAGGTATCGCGCTCCACAGCGTCCAGTTGGGCCGCCACCTGGCGACTGTAGGACAGGCCGGCt                                  >  1:287812/1‑149 (MQ=255)                                                                                                                       gCCGTGGTAGCAGCCATTGAGTGCCAAACGTCGGAACTACCGCCAGCTCG‑ATCACATTGGCGCCTTGCTGGCGCATTACCGACAAGGTATCGCGCTCCACAGCGTCCAGTTGGGCCGCCACCTGGCGACTGTAGGACAGGCCGGCTTCg                               >  4:171414/1‑149 (MQ=255)                                                                                                                         cGTGGTAGCAGCCATTGAGTGCCAAACGTCGGAACTACCGCCAGCTCG‑ATCACATTGGCGCCTTGCTGGCGCATTACCGACAAGGTATCGCGCTCCACAGCGTCCAGTTGGGCCGCCACCTGGCGACTGTAGGACAGGCCGGCTTCGGt                             >  7:90492/1‑149 (MQ=255)                                                                                                                           tGGTAGCAGCCATTGAGTGCCAAACGTCGGAACTACCGCCAGCTCG‑ATCACATTGGCGCCTTGCTGGCGCATTACCGACAAGGTATCGCGCTCCACAGCGTCCAGTTGGGCCGCCACCTGGCGACTGTAGGACAGGCCGGCTTCGGTCa                           >  8:79164/1‑149 (MQ=255)                                                                                                                                gcagcCATTGAGTGCCAAACGTCGGAACTACCGCCAGCTCG‑ATCACATTGGCGCCTTGCTGGCGCATTACCGACAAGGTATCGCGCTCCACAGCGTCCAGTTGGGCCGCCACCTGGCGACTGTAGGACAGGCCGGCTTCGGTCAGCCt                       >  5:273517/1‑148 (MQ=255)                                                                                                                                  agcCATTGAGTGCCAAACGTCGGAACTACCGCCAGCTCG‑ATCACATTGGCGCCTTGCTGGCGCATTACCGACAAGGTATCGCGCTCCACAGCGTCCAGTTGGGCCGCCACCTGGCGACTGTAGGACAGGCCGGCTTCGGTCAGCCTTAc                    >  5:213626/1‑149 (MQ=255)                                                                                                                                    ccATTGAGTGCCAAACGTCGGAACTACCGCCAGCTCG‑ATCACATTGGCGCCTTGCTGGCGCATTACCGACAAGGTATCGCGCTCCACAGCGTCCAGTTGGGCCGCCACCTGGCGACTGTAGGACAGGCCGGCTTCGGTCAGCCTTAcgc                  >  8:16934/1‑149 (MQ=255)                                                                                                                                    ccATTGAGTGCCAAACGTCGGAACTACCGCCAGCTCG‑ATCACATTGGCGCCTTGCTGGCGCATTACCGACAAGGTATCGCGCTCCACAGCGTCCAGTTGGGCCGCCACCTGGCGACTGTAGGACAGGCCGGCTTCGGTCAGCCTTAcgc                  >  3:349053/1‑149 (MQ=255)                                                                                                                                          aGTGCCAAACGTCGGAACTACCGCCAGCTCG‑ATCACATTGGCGCCTTGCTGGCGCATTACCGACAAGGTATCGCGCTCCACAGCGTCCAGTTGGGCCGCCACCTGGCGACTGTAGGACAGGCCGGCTTCGGTCAg                          >  6:173924/1‑135 (MQ=255)                                                                                                                                          aGTGCCAAACGTCGGAACTACCGCCAGCTCG‑ATCACATTGGCGCCTTGCTGGCGCATTACCGACAAGGTATCGCGCTCCACAGCGTCCAGTTGGGCCGCCACCTGGCGACTGTAGGACAGGCCGGCTTCGGTCAg                          <  5:173924/135‑1 (MQ=255)                                                                                                                                              ccAAACGTCGGAACTACCGCCAGCTCG‑ATCACATTGGCGCCTTGCTGGCGCATTACCGACAAGGTATCGCGCTCCACAGCGTCCAGTTGGGCCGCCACCTGGCGACTGTAGGACAGGCCGGCTTCGGTCAGCCTTACGCCGCGgcgc          >  2:93585/1‑147 (MQ=255)                                                                                                                                              ccAAACGTCGGAACTACCGCCAGCTCG‑ATCACATTGGCGCCTTGCTGGCGCATTACCGACAAGGTATCGCGCTCCACAGCGTCCAGTTGGGCCGCCACCTGGCGACTGTAGGACAGGCCGGCTTCGGTCAGCCTTACGCCGCGGCgcga        <  2:107166/149‑1 (MQ=255)                                                                                                                                              ccAAACGTCGGAACTACCGCCAGCTCG‑ATCACATTGGCGCCTTGCTGGCGCATTACCGACAAGGTATCGCGCTCCACAGCGTCCAGTTGGGCCGCCACCTGGCGACTGTAGGACAGGCCGGCTTCGGTCAGCCTTACGCCGCGGCgcga        <  7:113187/149‑1 (MQ=255)                                                                                                                                              ccAAACGTCGGAACTACCGCCAGCTCG‑ATCACATTGCCGCCTTGCTGGCGCATTACCCACAAGCTATCGCGCTCCACAGCGTACAGTTGGGCAGCCACCTGGCGACTg                                                 >  3:279873/1‑108 (MQ=255)                                                                                                                                              ccAAAAGTCGGAACTTCCGCCTGCTCG‑ATCACATTGGCGCCTTGCTGGCGCATTACCGACAAGGTATTGCGCTCCACAGCGTCCTTTTGGGCCGCCACGTTTCGACTg                                                 <  4:279873/108‑1 (MQ=255)                                                                                                                                               cAAACGTCGGAACTACCGCCAGCTCG‑ATCACATTGGCGCCTTGCTGGCGCATTACCGACAAGGTATCGCGCTCCACAGCGTCCAGTTGGGCCGCCACCTGGCGACTGTAGGACAGGCCGGCTTCGGTCAGCCTTACGCCGCGGCgcgag       >  3:17149/1‑149 (MQ=255)                                                                                                                                                aaaCGTCGGAACTACCGCCAGCTCG‑ATCACATTGGCGCCTTGCTGGCGCATTACCGACAAGGTATCGCGCTCCACAGCGTCCAGTTGGGCCGCCACCTGGCGACTGTAGGACAGGCCGGCTTCGGTCAGCCTTACGCCGCGGCgcgagc      >  6:234097/1‑149 (MQ=255)                                                                                                                                                aaaCGTCGGAACTACCGCCAGCTCG‑ATCACATTGGCGCCTTGCTGGCGCATTACCGACAAGGTATCGCGCTCCACAGCGTCCAGTTGGGCCGCCACCTGGCGACTGTAGGACAGGCCGGCTTCGGTCAGCCTTACGCCGCGGCgcgagc      >  2:47008/1‑149 (MQ=255)                                                                                                                                                 aaCGTCGGAACTACCGCCAGCTCG‑ATCACATTGGCGCCTTGCTGGCGCATTACCGACAAGGTATCGCGCTCCACAGCGTCCAGTTGGGCCGCCACCTGGCGACTg                                                 >  6:171832/1‑105 (MQ=255)                                                                                                                                                 aaCGTCGGAACTACCGCCAGCTCG‑ATCACATTGGCGCCTTGCTGGCGCATTACCGACAAGGTATCGCGCTCCACAGCGTCCAGTTGGGCCGCCACCTGGCGACTGTAGGACAGGCCGGCTTCGGTCAGCCTTACGCCGCGGCgcgagc      >  6:310971/1‑148 (MQ=255)                                                                                                                                                   cGTCGGAACTACCGCCAGCTCG‑ATCACATTGGCGCCTTGCTGGCGCATTACCGACAAGGTATCGCGCTCCACAGCGTCCAGTTGGGCCGCCACCTGGCGACTGTAGGACAGGCCGGCTTCGGTCAGCCTTACGCCGCGGCGCGAGCGAc   <  5:310971/149‑1 (MQ=255)                                                                                                                                                    GTCGGAACTACCGCCAGCTCG‑ATCACATTGGCGCCTTGCTGGCGCATTACCGACAAGGTATCGCGCTCCACAGCGTCCAGTTGGGCCGCCACCTGGCGACTGTAGGACAGGCCGGCTTCGGTCAGCCTTACGCCGCGGCGCGAGCGACg  <  6:353012‑M1/149‑1 (MQ=255)                                                                                                                                                    |                                                                                                                                                      CAGTCCGCATCACCAAAATAGATGGCGGCATCGAAGGTAGTGTCGGCAAACAGGAATGGCCGGGTGCGGTTGGTGAGGTTGACTGTGACCTCCGGGTGGCGCTGCTGGAAGTCCTTGAGCCGTGGTAGCAGCCATTGAGTGCCAAACGTCGGAACTACCGCCAGCTCG‑ATCACATTGGCGCCTTGCTGGCGCATTACCGACAAGGTATCGCGCTCCACAGCGTCCAGTTGGGCCGCCACCTGGCGACTGTAGGACAGGCCGGCTTCGGTCAGCCTTACGCCGCGGCGCGAGCGACG  >  NC_002947/167789‑168084

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.