New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	655539 =	62 (1.030)	4 (0.070)	3/248	NT	6.6%	coding (804/1356 nt)	PP_0563	two‑component system response regulator
	?	NC_002947	655583 =	55 (0.970)					coding (760/1356 nt)	PP_0563	two‑component system response regulator

GCTCACGGCGGGCGCGGAAGCTGCAGTCTTCCAGCAGCTGCAGGATATGAGTGTGGTTGTACAGCCCGGTCAGGCTGTCGCGGACCATGCGTGCCTTCAAATGGCGGGCGCGGGCGGCGCGGTTGCGCACGGTAGTGATCAGGTGGCGTGAGCGAAA‑CGGCTTGGTCAAAAAGTCATCACCGCCTTCGCTCATGGCATCCAGTTGCTTGTCCAGGTCGTCCTCGGCAGACAGGTAGATGATCGGCACACTCACATAACGGTCACTGTGGCGGATTACCTTGGCCAGCTCCGGGC  >  NC_002947/655391‑655684                                                                                                                                                     |                                                                                                                                                   gctCACGGCGGGCGCGGAAGCTGCAGTCTTCCAGCAGCTGCAGGATATGAGTGTGGTTGTACAGCCCGGTCAGGCTGTCGCGGACCATGCGTGCCTTCAAATGGCGGGCGCGGGCGGCGCGGTTGCGCACGGTAGTGATCAGGTGGCGt                                                                                                                                                    <  1:186523/149‑1 (MQ=255)   tCACGGCGGGCGCGGAAGCTGCAGTCTTCCAGCAGCTGCAGGATATGAGTGTGGTTGTACAGCCCGGTCAGGCTGTCGCGGACCATGCGTGCCTTCAAATGGCGGGCGCGGGCGGCGCGGTTGCGCACGGTAGTGATCAGGTGGCGt                                                                                                                                                    >  3:204964/1‑147 (MQ=255)   tCACGGCGGGCGCGGAAGCTGCAGTCTTCCAGCAGCTGCAGGATATGAGTGTGGTTGTACAGCCCGGTCAGGCTGTCGCGGACCATGCGTGCCTTCAAATGGCGGGCGCGGGCGGCGCGGTTGCGCACGGTAGTGATCAGGTGGCGt                                                                                                                                                    >  4:105519/1‑147 (MQ=255)   gcccgacctgatcatcctcgacctgtacatgccggcctgcaccggcccggagctggccaaggtaatccgccacagtgaccgttatgtgagtgtgccgatcatctacctgtctgccgaggacgacctggacaagcaactggatgccaTGa                                                                                                                                                  >  7:222001‑M1/147‑149 (MQ=255)   gcccgacctgatcatcctcgacctgtacatgccggcctgcaccggcccggagctggccaaggtaatccgccacagtgaccgttatgtgagtgtgccgatcatctacctgtctgccgaggacgacctggacaagcaactggatgccaTGa                                                                                                                                                  >  4:53630‑M1/147‑149 (MQ=255)    cccgacctgatcatcctcgacctgtacatgcgggcctgcaccggcccggagctggccaaggtaatccgccacagtgaccgttatgtgagtgtgccgatcatctacctgtctgccgaggacgacctggacaagcaactggatgccaTGAg                                                                                                                                                 >  5:284618‑M1/146‑149 (MQ=255)     aCGGCGGGCGCGGAAGCTGCAGTCTTCCAGCAGCTGCAGGATATGAGTGTGGTTGTACAGCCCGGTCAGGCTGTCGCGGACCATGCGTGCCTTCAAATGGCGGGCGCGGGCGGCGCGGTTGCGCACGGTAGTGATCAGGTTGCGTGAg                                                                                                                                                 <  6:51340/148‑1 (MQ=255)     aCGGCGGGCGCGGAAGCTGCAGTCTTCCAGCAGCTGCAGGATATGAGTGTGGTTGTACAGCCCGGTCAGGCTGTCGCGGACCATGCGTGCCTTCAAATGGCGGGCGCGGGCGGCGCGGTTGCGCACGGTAGTGATCAGGTGGCGTGAGc                                                                                                                                                <  6:209414/149‑1 (MQ=255)      cggcggGCGCGGAAGCTGCAGTCTTCCAGCAGCTGCAGGATATGAGTGTGGTTGTACAGCCCGGTCAGGCTGTCGCGGACCATGCGTGCCTTCAAATGGCGGGCGCGGGCGGCGCGGTTGCGCACGGTAGTGATCAGGTGGCGTGAGCg                                                                                                                                               <  4:286485/149‑1 (MQ=255)               cgGAAGCTGCAGTCTTCCAGCAGCTGCAGGATATGAGTGTGGTTGTACAGCCCGGTCAGGCTGTCGCGGACCATGCGTGCCTTCAAATGGCGGGCGCGGGCGGCGCGGTTGCGCACGGTAGTGATCAGGTGGCGTGAGCGAAA‑CGGCtt                                                                                                                                     <  4:333900/149‑1 (MQ=255)                ggAAGCTGCAGTCTTCCAGCAGCTGCAGGATATGAGTGTGGTTGTACAGCCCGGTCAGGCTGTCGCGGACCATGCGTGCCTTCAAATGGCGGGCGCGGGCGGCGCGGTTGCGCACGGTAGTGATCAGGTGGCGTGAGCGAAA‑CGGCTTg                                                                                                                                    >  8:332005/1‑149 (MQ=255)                 gAAGCTGCAGTCTTCCAGCAGCTGCAGGATATGAGTGTGGTTGTACAGCCCGGTCAGGCTGTCGCGGACCATGCGTGCCTTCAAATGGCGGGCGCGGGCGGCGCGGTTGCGCACGGTAGTGATCAGGTGGCGTGAGCGAAA‑CGGCTTgg                                                                                                                                   >  8:303083/1‑149 (MQ=255)                  aaGCTGCAGGCTTCCAGCAGCTGCAGGATATGAGTGTGGTTGTACAGCCCGGTCAGGCTGTCGCGGACCATGCGTGCCTTCAAATGGCGGGCGCGGGCGGCGCGGTTGCGCACGGTAGTGATCAGGTGGCGTGAGCGAAA‑CGGCTTGGt                                                                                                                                  <  8:190658/149‑1 (MQ=255)                   aGCTGCAGTCTTCCAGCAGCTGCAGGATATGAGTGTGGTTGTACAGCCCGGTCAGGCTGTCGCGGACCATGCGTGCCTTCAAATGGCGGGCGCGGGCGGCGCGGTTGCGCACGGTAGTGATCAGGTGGCGTGAGCGAAA‑CGGCTTGGt                                                                                                                                  >  2:161693/1‑148 (MQ=255)                      tGCAGTCTTCCAGCAGCTGCAGGATATGAGTGTGGTTGTACAGCCCGGTCAGGCTGTCGCGGACCATGCGTGCCTTCAAATGGCGGGCGCGGGCGGCGCGGTTGCGCACGGTAGTGATCAGGTGGCGTGAGCGAAA‑CGGCTTGGTCaa                                                                                                                               >  3:308797/1‑148 (MQ=255)                       gCAGTCTTCCAGCAGCTGCAGGATATGAGTGTGGTTGTACAGCCCGGTCAGGCTGTCGCGGACCATGCGTGCCTTCAAATGGCGGGCGCGGGCGGCGCGGTTGCGCACGGTAGTGATCAGGTGGCGTGAGCGAAA‑CGGCTTGGTCaaa                                                                                                                              >  3:312300/1‑148 (MQ=255)                        cAGTCTTCCAGCAGCTGCAGGATATGAGTGTGGTTGTACAGCCCGGTCAGGCTGTCGCGGACCATGCGTGCCTTCAAATGGCGGGCGCGGGCGGCGCGGTTGCGCACGGTAGTGATCAGGTGGCGTGAGCGAAA‑CGGCTTGGTCaaaaa                                                                                                                            <  5:29186/149‑1 (MQ=255)                        cAGTCTTCCAGCAGCTGCAGGATATGAGTGTGGTTGTACAGCCCGGTCAGGCTGTCGCGGACCATGCGTGCCTTCAAATGGCGGGCGCGGGCGGCGCGGTTGCGCACGGTAGTGATCAGGTGGCGTGAGCGAAA‑CGGCTTGGTCaaa                                                                                                                              >  4:45737/1‑147 (MQ=255)                        cAGTCTCCCAGCCGCTGCAGGTTATGAGTTGGGTTGGCCACCCCGGTCAGGCTGTCGCGGACCATGCGTGCCTGCAAATGGCGGGCGCGGGCGGCGCGGTTGCGCACGGTAGTGATCAGGTGCCGTGAGCGAAA‑CGGCTTGGTCaaaaa                                                                                                                            <  8:263813/149‑1 (MQ=255)                         aGTCTGCCAGCAGCGGCAGGATATGAGGGTGGGTGGCCAGCCCGGTCAGGCTGTCGCGGACCATGCGTGCCTTCAAATGGCGGGCGCGGGCGGCGCGGTTGCGCACGGTAGTGATCAGGTGGCGTGAGCGAAA‑CGGCTTGGTCAAAAAg                                                                                                                           <  4:227907/149‑1 (MQ=255)                             tcccAGCAGCTGCAGGATATGAGTGTGGTTGTACAGCCCGGTCAGGCTGTCGCGGACCATGCGTGCCTTCAAATGGCGGGCGCGGGCGGCGCGGTTGCGCACGGTAGTGATCAGGTGGCGTGAGCGAAA‑CGGCTTGGTCAAAAAGtca                                                                                                                        >  4:293159/3‑148 (MQ=255)                               ccAGCAGCTGCAGGATATGAGTGTGGTTGTACAGCCCGGTCAGGCTGTCGCGGACCATGCGTGCCTTCAAATGGCGGGCGCGGGCGGCGCGGTTGCGCACGGTAGTGATCAGGTGGCGTGAGCGAAA‑CGGCTTGGTCAAAAAGtcatc                                                                                                                      <  3:8968/148‑1 (MQ=255)                               ccAGCAGCTGCAGGATATGAGTGTGGTTGTACAGCCCGGTCAGGCTGTCGCGGACCATGCGTGCCTTCAAATGGCGGGCGCGGGCGGCGCGGTTGCGCACGGTAGTGATCAGGTGGCGTGAGCGAAA‑CGGCTTGGTCAAAAAGtcatc                                                                                                                      >  4:8968/1‑148 (MQ=255)                               ccAGCAGCTGCAGGATATGAGTGTGGTTGTACAGCCCGGTCAGGCTGTCGCGGACCATGCGTGCCTTCAAATGGCGGGCGCGGGCGGCGCGGTTGCGCACGGTAGTGATCAGGTGGCGTGAGCGAAA‑CGGCTTGGTCAAAAAGtcat                                                                                                                       <  4:83782/147‑1 (MQ=255)                                cagcagCTGCAGGATATGAGTGTGGTTGTACAGCCCGGTCAGGCTGTCGCGGACCATGCGTGCCTTCAAATGGCGGGCGCGGGCGGCGCGGTTGCGCACGGTAGTGATCAGGTGGCGTGAGCGAAA‑CGGCTTGGTCAAAAAGTCATCAc                                                                                                                    >  1:85640/1‑149 (MQ=255)                                 agcagcTGCAGGATATGAGTGTGGTTGTACAGCCCGGTCAGGCTGTCGCGGACCATGCGTGCCTTCAAATGGCGGGCGCGGGCGGCGCGGTTGCGCACGGTAGTGATCAGGTGGCGTGAGCGAAA‑CGGCTTGGTCAAAAAGTCATCAcc                                                                                                                   <  7:261383/149‑1 (MQ=255)                                  gcagcTGCAGGATATGAGTGTGGTTGTACAGCCCGGTCAGGCTGTCGCGGACCATGCGTGCCTTCAAATGGCGGGCGCGGGCGGCGCGGTTGCGCACGGTAGTGATCAGGTGGCGTGAGCGAAA‑CGGCTTGGTCAAAAAGTCATCACCg                                                                                                                  >  5:11538/1‑149 (MQ=255)                                       ctgcaccggcccggagctggccaaggtaatccgccacagtgaccgttatgtgagtgtgccgatcatctacctgtctgccgaggacgacctggacaagcaactggatgccaTGAGCGAAA‑CGGCTTGGTCAAAAAGTCATCACCGCCTTc                                                                                                             <  6:134617‑M1/39‑1 (MQ=255)                                        gCAGGATATGAGTGTGGTTGTACAGCCCGGTCAGGCTGTCGCGGACCATGCGTGCCTTCAAATGGCGGGCGCGGGCGGCGCGGTTGCGCACGGTAGTGATCAGGTGGCGTGAGCGAAA‑CGGCTTGGTCAAAAAGTCATCACCGCCTTCg                                                                                                            >  2:25710/1‑149 (MQ=255)                                         cAGGATATGAGTGTGGTTGTACAGCCCGGTCAGGCTGTCGCGGACCATGCGTGCCTTCAAATGGCGGGCGCGGGCGGCGCGGTTGCGCACGGTAGTGATCAGGTGGCGTGAGCGAAA‑CGGCTTGGTCAAAAAGTCATCACCGCCTTc                                                                                                             <  5:20932/147‑1 (MQ=255)                                         cAGGATATGAGTGTGGTTGTACAGCCCGGTCAGGCTGTCGCGGACCATGCGTGCCTTCAAATGGCGGGCGCGGGCGGCGCGGTTGCGCACGGTAGTGATCAGGTGGCGTGAGCGAAA‑CGGCTTGGTCAAAAAGTCATCACCGCCTTc                                                                                                             >  6:20932/1‑147 (MQ=255)                                             cggcccggagctggccaaggtaatccgccacagtgaccgttatgtgagtgtgccgatcatctacctgtctgccgaggacgacctggacaagcaactggatgccaTGAGCGAAA‑CGGCTTGGTCAAAAAGTCATCACCGCCTTCGCTCAt                                                                                                       >  4:362966‑M1/105‑149 (MQ=255)                                             atatGAGTGTGGTTGTACAGCCCGGTCAGGCTGTCGCGGACCATGCGTGCCTTCAAATGGCGGGCGCGGGCGGCGCGGTTGCGCACGGTAGTGATCAGGTGGCGTGAGCGAAA‑CGGCTTGGTCAAAAAGTCATCACCGCCTTCGCTCAt                                                                                                       <  1:264296/149‑1 (MQ=255)                                              ggcccggagctggccaaggtaatccgccacagtgaccgttatgtgagtgtgccgatcatctacctgtctgccgaggacgacctggacaagcaactggatgccaTGAGCGAAA‑CGGCTTGGTCAAAAAGTCATCACCGCCTTCGCTCATg                                                                                                      >  5:134617‑M1/104‑149 (MQ=255)                                               gcccggagctggccaaggtaatccgccacagtgaccgttatgtgagtgtgccgatcatctacctgtctgccgaggacgacctggacaagcaactggatgccaTGAGCGAAAACGGCTTGGTCAAAAAGTCATCACCGCCTTCGCTCATg                                                                                                      >  1:67968‑M1/103‑149 (MQ=255)                                               atGAGTGTGGTTGTACAGCCCGGTCAGGCTGTCGCGGACCATGCGTGCCTTCAAATGGCGGGCGCGGGCGGCGCGGTTGCGCACGGTAGTGATCAGGTGGCGTGAGCGAAA‑CGGCTTGGTCAAAAAGTCATCACCGCCTTCGCTCATgg                                                                                                     >  1:139189/1‑149 (MQ=255)                                                  aGTGTGGTTGTACAGCCCGGTCAGGCTGTCGCGGACCATGCGTGCCTTCAAATGGCGGGCGCGGGCGGCGCGGTTGCGCACGGTAGTGATCAGGTGGCGTGAGCGAAA‑CGGCTTGGTCAAAAAGTCATCACCGCCTTCGCTCATGGCAt                                                                                                  <  6:329959/149‑1 (MQ=255)                                                        gTTGTACAGCCCGGTCAGGCTGTCGCGGACCATGCGTGCCTTCAAATGGCGGGCGCGGGCGGCGCGGTTGCGCACGGTAGTGATCAGGTGGCGTGAGCGAAA‑CGGCTTGGTCAAAAAGTCATCACCGCCTTCGCTCATGGCATCCAGtt                                                                                            <  3:105519/149‑1 (MQ=255)                                                        gTTGTACAGCCCGGTCAGGCTGTCGCGGACCATGCGTGCCTTCAAATGGCGGGCGCGGGCGGCGCGGTTGCGCACGGTAGTGATCAGGTGGCGTGAGCGAAA‑CGGCTTGGTCAAAAAGTCATCACCGCCTTCGCTCATGGCATCCAGt                                                                                             <  7:332005/148‑1 (MQ=255)                                                         ttGTACAGCCCGGTCAGGCTGTCGCGGACCATGCGTGCCTTCAAATGGCGGGCGCGGGCGGCGCGGTTGCGCACGGTAGTGATCAGGTGGCGTGAGCGAAA‑CGGCTTg                                                                                                                                    >  8:237604/1‑108 (MQ=255)                                                         ttGTACAGCCCGGTCAGGCTGTCGCGGACCATGCGTGCCTTCAAATGGCGGGCGCGGGCGGCGCGGTTGCGCACGGTAGTGATCAGGTGGCGTGAGCGAAA‑CGGCTTg                                                                                                                                    <  7:237604/108‑1 (MQ=255)                                                           gTACAGCCCGGTCAGGCTGTCGCGGACCATGCGTGCCTTCAAATGGCGGGCGCGGGCGGCGCGGTTGCGCACGGTAGTGATCAGGTGGCGTGAGCGAAA‑CGGCTTGGTCAAAAAGTCATCACCGCCTTCGCTCATGGCATCCAGTTGc                                                                                          <  4:112684/148‑1 (MQ=255)                                                             aCAGCCCGGTCAGGCTGTCGCGGACCATGCGTGCCTTCAAATGGCGGGCGCGGGCGGCGCGGTTGCGCACGGTAGTGATCAGGTGGCGTGAGCGAAA‑CGGCTTGGTCAAAAAGTCATCACCGCCTTCGCTCATGGCATCCAGTTGCTTg                                                                                       >  3:262343/1‑149 (MQ=255)                                                                gCCCGGTCAGGCTGTCGCGGACCATGCGTGCCTTCAAATGGCGGGCGCGGGCGGCGCGGTTGCGCACGGTAGTGATCAGGTGGCGTGAGCGAAA‑CGGCTTGGTCAAAAAGTCATCACCGCCTTCGCTCATGGCATCCAGtt                                                                                            <  4:91812/141‑1 (MQ=255)                                                                gCCCGGTCAGGCTGTCGCGGACCATGCGTGCCTTCAAATGGCGGGCGCGGGCGGCGCGGTTGCGCACGGTAGTGATCAGGTGGCGTGAGCGAAA‑CGGCTTGGTCAAAAAGTCATCACCGCCTTCGCTCATGGCATCCAGtt                                                                                            >  3:91812/1‑141 (MQ=255)                                                                gCCCGGTCAGGCTGTCGCGGACCATGCGTGCCTTCAAATGGCGGGCGCGGGCGGCGCGGTTGCGCACGGTAGTGATCAGGTGGCGTGAGCGAAA‑CGGCTTGGTCAAAAAGTCATCACCGCCTTCGCTCATGGCATCCAGTTGCTTGTc                                                                                     >  3:10847/1‑148 (MQ=255)                                                                   cGGTCAGGCTGTCGCGGACCATGCGTGCCTTCAAATGGCGGGCGCGGGCGGCGCGGTTGCGCACGGTAGTGATCAGGTGGCGTGAGCGAAA‑CGGCTTGGTCAAAAAGTCATCACCGCCTTCGCTCATGGCATCCAGTTGCTTGTCCAgg                                                                                 <  7:303083/149‑1 (MQ=255)                                                                   cGGTCAGGCTGTCGCGGACCATGCGTGCCTTCAAATGGCGGGCGCGGGCGGCGCGGTTGCGCACGGTAGTGATCAGGTGGCGTGAGCGAAA‑CGGCTTGGTCAAAAAGTCATCACCGCCTTCGCTCATGGCATCCAGTTGCTTGTCCAgg                                                                                 <  8:83696/149‑1 (MQ=255)                                                                     gTCAGGCTGTCGCGGACCATGCGTGCCTTCAAATGGCGGGCGCGGGCGGCGCGGTTGCGCACGGTAGTGATCAGGTGGCGTGAGCGAAA‑CGGCTTGGTCAAAAAGTCATCACCGCCTTCGCTCATGGCATCCAGTTGCTTGTCCAGgtc                                                                               <  1:161693/149‑1 (MQ=255)                                                                     gTCAGGCTGTCGCGGACCATGCGTGCCTTCAAATGGCGGGCGCGGGCGGCGCGGTTGCGCACGGTAGTGATCAGGTGGCGTGAGCGAAA‑CGGCTTGGTCAAAAAGTCATCACCGCCTTCGCTCATGGCATCCAGTTGCTTGTCCAGgtc                                                                               >  5:120136/1‑149 (MQ=255)                                                                              tCGCGGACCATGCGTGCCTTCAAATGGCGGGCGCGGGCGGCGCGGTTGCGCACGGTAGTGATCAGGTGGCGTGAGCGAAA‑CGGCTTGGTCAAAAAGTCATCACCGCCTTCGCTCATGGCATCCAGTTGCTTGTCCAGGTCGTCCTCGGc                                                                      <  6:11538/149‑1 (MQ=255)                                                                                gcgGACCATGCGTGCCTTCAAATGGCGGGCGCGGGCGGCGCGGTTGCGCACGGTAGTGATCAGGTGGCGTGAGCGAAA‑CGGCTTGGTCAAAAAGTCATCACCGCCTTCGCTCATGGCATCCAGTTGCTTGTCCAGGTCGTCCTCGGCa                                                                     <  2:139189/148‑1 (MQ=255)                                                                                gcgGACCATGCGTGCCTTCAAATGGCGGGCGCGGGCGGCGCGGTTGCGCACGGTAGTGATCAGGTGGCGTGAGCGAAA‑CGGCTTGGTCAAAAAGTCATCACCGCCTTCGCTCATGGCATCCAGTTGCTTGTCCAGGTCGTCCTCGGCa                                                                     <  7:168702/148‑1 (MQ=255)                                                                                     ccATGCGTGCCTTCAAATGGCGGGCGCGGGCGGCGCGGTTGCGCACGGTAGTGATCAGGTGGCGTGAGCGAAA‑CGGCTTGGTCAAAAAGTCATCACCGCCTTCGCTCATGGCATCCAGTTGCTTGTCCAGGTCGTCCTCGGcaggcagg                                                               <  1:25710/149‑1 (MQ=255)                                                                                       aTGCGTGCCTTCAAATGGCGGGCGCGGGCGGCGCGGTTGCGCACGGTAGTGATCATGTGGCGTGAGCGAAA‑CGGCTTGGTCAAAAAGTCATCACCGCCTTCGCTCATGGCATCCAGTTGCTTGTCCAGGTCGTCCTCGGCAGACAGGTa                                                             <  5:341762/149‑1 (MQ=255)                                                                                               cTTCAAATGGCGGGCGCGGGCGGCGCGGTTGCGCACGGTAGTGATCAGGTGGCGTGAGCGAAA‑CGGCTTGGTCAAAAAGTCATCACCGCCTTCGCTCATGGCATCCAGTTGCTTGTCCAGGTCGTCCTCGGCAGACAGGTAGATGATCg                                                     >  1:80753/1‑149 (MQ=255)                                                                                                ttCAAATGGCGGGCGCGGGCGGCGCGGTTGCGCACGGTAGTGATCAGGTGGCGTGAGCGAAA‑CGGCTTGGTCAAAAAGTCATCACCGCCTTCGCTc                                                                                                         >  3:15355/1‑96 (MQ=255)                                                                                                ttCAAATGGCGGGCGCGGGCGGCGCGGTTGCGCACGGTAGTGATCAGGTGGCGTGAGCGAAA‑CGGCTTGGTCAAAAAGTCATCACCGCCTTCGCTc                                                                                                         <  4:15355/96‑1 (MQ=255)                                                                                                ttCAAATGGCGGGCGCGGGCGGCGCGGTTGCGCACGGTAGTGATCAGGTGGCGTGAGCGAAA‑CGGCTTGGTCAAAAAGTCATCACCGCCTTCGCTCATGGCATCCAGTTGCTTGTCCAGGTCGTCCTCGGCAGACAGGt                                                              >  7:148387/1‑139 (MQ=255)                                                                                                ttCAAATGGCGGGCGCGGGCGGCGCGGTTGCGCACGGTAGTGATCAGGTGGCGTGAGCGAAA‑CGGCTTGGTCAAAAAGTCATCACCGCCTTCGCTCATGGCATCCAGTTGCTTGTCCAGGTCGTCCTCGGCAGACAGGt                                                              <  8:148387/139‑1 (MQ=255)                                                                                                    aaTGGCGGGCGCGGGCGGCGCGGTTGCGCACGGTAGTGATCAGGTGGCGTGAGCGAAA‑CGGCTTGGTCAAAAAGTCATCACCGCCTTCGCTCATGGCATCCAGTTGCTTGTCCAGGTCGTCCTCGGCAGACAGGTAGATGATCGGcac                                                 >  2:179255/1‑148 (MQ=255)                                                                                                      tGGCGGGCGCGGGCGGCGCGGTTGCGCACGGTAGTGATCAGGTGGCGTGAGCGAAA‑CGGCTTGGTCAAAAAGTCATCACCGCCTTCGCTCATGGCATCCAGTTGCTTGTCCAGGTCGTCCTCGGCAGACAGGTAGATGATCGGCACACt                                              >  6:284261/1‑149 (MQ=255)                                                                                                        gcgggcgcgggcGGCGCGGTTGCGCACGGTAGTGATCAGGTGGCGTGAGCGAAA‑CGGCTTGGTCAAAAAGTCATCACCGCCTTCGCTCATGGCATCCAGTTGCTTGTCCAGGTCGTCCTCGGCAGACAGGTAGATGATCGGCACACTc                                             <  4:204964/148‑1 (MQ=255)                                                                                                         cgggcgcgggcgGCGCGGTTGCGCACGGTAGTGATCAGGTGGCGTGAGCGAAA‑CGGCTTGGTCAAAAAGTCATCACCGCCTTCGCTCATGACATCCAGTTGCTTGTCCAGGTCGTCCTCGGCAGACAGGTAGATGATCGGCACACTcac                                           <  4:308797/149‑1 (MQ=255)                                                                                                              gcgggcggCGCGGTTGCGCACGGTAGTGATCAGGTGGCGTGAGCGAAA‑CGGCTTGGTCAAAAAGTCATCACCGCCTTCGCTCATGGCATCCAGTTGCTTGTCCAGGTCGTCCTCGGCAGACAGGTAGATGATCGGCACACTCACATAAc                                      <  3:45737/149‑1 (MQ=255)                                                                                                                    ggcgCGGTTGCGCACGGTAGTGATCAGGTGGCGTGAGCGAAA‑CGGCTTGGTCAAAAAGTCATCACCGCCTTCGCTCATGGCATCCAGTTGCTTGTCCAGGTCGTCCTCGGCAGACAGGTAGATGATCGGCACACTCACATAACGGTCAc                                >  3:15457/1‑149 (MQ=255)                                                                                                                        cgGTTGCGCACGGTAGTGATCAGGTGGCGTGAGCGAAA‑CGGCTTGGTCAAAAAGTCATCACCGCCTTCGCTCATGGCATCCAGTTGCTTGTCCAGGTCGTCCTCGGCAGACAGGTAGATGATCGGCACACTCACATAACGGTCACtgtg                            <  3:293159/149‑1 (MQ=255)                                                                                                                              cgcACGGTAGTGATCAGGTGGCGTGAGCGAAA‑CGGCTTGGTCAAAAAGTCATCACCGCCTTCGCTCATGGCATCCAGTTGCTTGTCCAGGTCGTCCTCGGCAGACAGGTAGATGATCGGCACACTCACATAACGGTCACTGTGGCGGa                       <  5:243663/148‑1 (MQ=255)                                                                                                                                  aggTAGTGAGCAGGTGGCGTGAGCGAAA‑CTGATTGGTGAAAATGTCATCACCGACTTCGCTCATGTCATCCAGTTGCTTGTCCATGTCGTCCTCGGCAGAGAGGTATATGATCGGCACACTCACATAACTTTCACTGTGGCTGATTAcc                  <  3:136420/148‑1 (MQ=255)                                                                                                                                    gTAGTGATCAGGTGGCGTGAGCGAAA‑CGGCTTGGTCAAAAAGTCATCACCGCCTTCGCTCATGGCATCCAGTTGCTTGTCCAGGTCGTCCTCGGCAGACAGGTAGATGATCGGCACACTCACATAACGGTCACTGTGGCGGATTACCtt                <  6:9194/149‑1 (MQ=255)                                                                                                                                     tAGTGATCAGGTGGCGTGAGCGAAA‑CGGCTTGGTCAAAAAGTCATCACCGCCTTCGCTCATGGCATCCAGTTGCTTGTCCAGGTCGTCCTCGGCAGACAGGTAGATGATCGGCACACTCACATAACGGTCACTGTGGCGGATTACCTTg               <  5:284261/149‑1 (MQ=255)                                                                                                                                             aGGTGGCGTGAGCGAAA‑CGGCTTGGTCAAAAAGTCATCACCGCCTTCGCTCATGGCATCCAGTTGCTTGTCCAGGTCGTCCTCGGCAGACAGGTAGATGATCGGCACACTCACATAACGGTCACTGTGGCGGATTACCTTGGCCAGCTc       <  4:15457/149‑1 (MQ=255)                                                                                                                                              ggTGGCGTGAGCGAAA‑CGGCTTGGTCAAAGAGTCATCACCGCCTTCGCTCATGGCATCCAGTTGCTTGTCCAGGTCGTCCTCGGCAGACAGGTAGATGATCGGCACACTCACATAACGGTCACTGTGGCGGATTACCTTGGCCAGCTcc      >  6:322441/1‑149 (MQ=255)                                                                                                                                              ggTGGCGTGAGCGAAA‑CGGCTTGGTCAAAAAGTCATCACCGCCTTCGCTCATGGCATCCAGTTGCTTGTCCAGGTCGTCCTCGGCAGACAGGTAGATGATCGGCACACTCACATAACGGTCACTGTGGCGGATTACCTTGGCCAGCTcc      >  3:89755/1‑149 (MQ=255)                                                                                                                                                  gCGTGAGCGAAA‑CGGCTTGGTCAAAAAGTCATCACCGCCTTCGCTCATGGCATCCAGTTGCTTGTCCAGGTCGTCCTCGGCAGACAGGTAGATGATCGGCACACTCACATAACGGTCACTGTGGCGGATTACCTTGGCCAGCTCCGGGc  >  3:154826/1‑149 (MQ=255)                                                                                                                                                  gCGTGAGCGAAA‑CGGCTTGGTCAAAAAGTCATCACCGCCTTCGCTCATGGCATCCAGTTGCTTGTCCAGGTCGTCCTCGGCAGACAGGTAGATGATCGGCACACTCACATAACGGTCACTGTGGCGGATTACCTTGGCCAGCTCCGGGc  <  6:120136/149‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                   GCTCACGGCGGGCGCGGAAGCTGCAGTCTTCCAGCAGCTGCAGGATATGAGTGTGGTTGTACAGCCCGGTCAGGCTGTCGCGGACCATGCGTGCCTTCAAATGGCGGGCGCGGGCGGCGCGGTTGCGCACGGTAGTGATCAGGTGGCGTGAGCGAAA‑CGGCTTGGTCAAAAAGTCATCACCGCCTTCGCTCATGGCATCCAGTTGCTTGTCCAGGTCGTCCTCGGCAGACAGGTAGATGATCGGCACACTCACATAACGGTCACTGTGGCGGATTACCTTGGCCAGCTCCGGGC  >  NC_002947/655391‑655684

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.