New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	655539 =	62 (1.030)	4 (0.070)	3/248	NT	6.6%	coding (804/1356 nt)	PP_0563	two‑component system response regulator
	?	NC_002947	655583 =	55 (0.970)					coding (760/1356 nt)	PP_0563	two‑component system response regulator

ATATGAGTGTGGTTGTACAGCCCGGTCAGGCTGTCGCGGACCATGCGTGCCTTCAAATGGCGGGCGCGGGCGGCGCGGTTGCGCACGGTAGTGATCAGGTGGCGTGAGCGAAA‑CGGCTTGGTCAAAAAGTCATCACCGCCTTCGCTCATGGCATCCAGTTGCTTGTCCAGGTCGTCCTCGGCAGACAGGTAGATGATCGGCACACTCACATAACGGTCACTGTGGCGGATTACCTTGGCCAGCTCCGGGCCGGTGCAGGCCGGCATGTACAGGTCGAGGATGATCAGGTCGGGCTGG  >  NC_002947/655435‑655731                                                                                                                                                      |                                                                                                                                                     cggcccggagctggccaaggtaatccgccacagtgaccgttatgtgagtgtgccgatcatctacctgtctgccgaggacgacctggacaagcaactggatgccaTGAGCGAAA‑CGGCTTGGTCAAAAAGTCATCACCGCCTTCGCTCAt                                                                                                                                                      >  4:362966‑M1/105‑149 (MQ=255) atatGAGTGTGGTTGTACAGCCCGGTCAGGCTGTCGCGGACCATGCGTGCCTTCAAATGGCGGGCGCGGGCGGCGCGGTTGCGCACGGTAGTGATCAGGTGGCGTGAGCGAAA‑CGGCTTGGTCAAAAAGTCATCACCGCCTTCGCTCAt                                                                                                                                                      <  1:264296/149‑1 (MQ=255)  ggcccggagctggccaaggtaatccgccacagtgaccgttatgtgagtgtgccgatcatctacctgtctgccgaggacgacctggacaagcaactggatgccaTGAGCGAAA‑CGGCTTGGTCAAAAAGTCATCACCGCCTTCGCTCATg                                                                                                                                                     >  5:134617‑M1/104‑149 (MQ=255)   gcccggagctggccaaggtaatccgccacagtgaccgttatgtgagtgtgccgatcatctacctgtctgccgaggacgacctggacaagcaactggatgccaTGAGCGAAAACGGCTTGGTCAAAAAGTCATCACCGCCTTCGCTCATg                                                                                                                                                     >  1:67968‑M1/103‑149 (MQ=255)   atGAGTGTGGTTGTACAGCCCGGTCAGGCTGTCGCGGACCATGCGTGCCTTCAAATGGCGGGCGCGGGCGGCGCGGTTGCGCACGGTAGTGATCAGGTGGCGTGAGCGAAA‑CGGCTTGGTCAAAAAGTCATCACCGCCTTCGCTCATgg                                                                                                                                                    >  1:139189/1‑149 (MQ=255)      aGTGTGGTTGTACAGCCCGGTCAGGCTGTCGCGGACCATGCGTGCCTTCAAATGGCGGGCGCGGGCGGCGCGGTTGCGCACGGTAGTGATCAGGTGGCGTGAGCGAAA‑CGGCTTGGTCAAAAAGTCATCACCGCCTTCGCTCATGGCAt                                                                                                                                                 <  6:329959/149‑1 (MQ=255)            gTTGTACAGCCCGGTCAGGCTGTCGCGGACCATGCGTGCCTTCAAATGGCGGGCGCGGGCGGCGCGGTTGCGCACGGTAGTGATCAGGTGGCGTGAGCGAAA‑CGGCTTGGTCAAAAAGTCATCACCGCCTTCGCTCATGGCATCCAGtt                                                                                                                                           <  3:105519/149‑1 (MQ=255)            gTTGTACAGCCCGGTCAGGCTGTCGCGGACCATGCGTGCCTTCAAATGGCGGGCGCGGGCGGCGCGGTTGCGCACGGTAGTGATCAGGTGGCGTGAGCGAAA‑CGGCTTGGTCAAAAAGTCATCACCGCCTTCGCTCATGGCATCCAGt                                                                                                                                            <  7:332005/148‑1 (MQ=255)               gTACAGCCCGGTCAGGCTGTCGCGGACCATGCGTGCCTTCAAATGGCGGGCGCGGGCGGCGCGGTTGCGCACGGTAGTGATCAGGTGGCGTGAGCGAAA‑CGGCTTGGTCAAAAAGTCATCACCGCCTTCGCTCATGGCATCCAGTTGc                                                                                                                                         <  4:112684/148‑1 (MQ=255)                 aCAGCCCGGTCAGGCTGTCGCGGACCATGCGTGCCTTCAAATGGCGGGCGCGGGCGGCGCGGTTGCGCACGGTAGTGATCAGGTGGCGTGAGCGAAA‑CGGCTTGGTCAAAAAGTCATCACCGCCTTCGCTCATGGCATCCAGTTGCTTg                                                                                                                                      >  3:262343/1‑149 (MQ=255)                    gCCCGGTCAGGCTGTCGCGGACCATGCGTGCCTTCAAATGGCGGGCGCGGGCGGCGCGGTTGCGCACGGTAGTGATCAGGTGGCGTGAGCGAAA‑CGGCTTGGTCAAAAAGTCATCACCGCCTTCGCTCATGGCATCCAGtt                                                                                                                                           <  4:91812/141‑1 (MQ=255)                    gCCCGGTCAGGCTGTCGCGGACCATGCGTGCCTTCAAATGGCGGGCGCGGGCGGCGCGGTTGCGCACGGTAGTGATCAGGTGGCGTGAGCGAAA‑CGGCTTGGTCAAAAAGTCATCACCGCCTTCGCTCATGGCATCCAGtt                                                                                                                                           >  3:91812/1‑141 (MQ=255)                    gCCCGGTCAGGCTGTCGCGGACCATGCGTGCCTTCAAATGGCGGGCGCGGGCGGCGCGGTTGCGCACGGTAGTGATCAGGTGGCGTGAGCGAAA‑CGGCTTGGTCAAAAAGTCATCACCGCCTTCGCTCATGGCATCCAGTTGCTTGTc                                                                                                                                    >  3:10847/1‑148 (MQ=255)                       cGGTCAGGCTGTCGCGGACCATGCGTGCCTTCAAATGGCGGGCGCGGGCGGCGCGGTTGCGCACGGTAGTGATCAGGTGGCGTGAGCGAAA‑CGGCTTGGTCAAAAAGTCATCACCGCCTTCGCTCATGGCATCCAGTTGCTTGTCCAgg                                                                                                                                <  8:83696/149‑1 (MQ=255)                       cGGTCAGGCTGTCGCGGACCATGCGTGCCTTCAAATGGCGGGCGCGGGCGGCGCGGTTGCGCACGGTAGTGATCAGGTGGCGTGAGCGAAA‑CGGCTTGGTCAAAAAGTCATCACCGCCTTCGCTCATGGCATCCAGTTGCTTGTCCAgg                                                                                                                                <  7:303083/149‑1 (MQ=255)                         gTCAGGCTGTCGCGGACCATGCGTGCCTTCAAATGGCGGGCGCGGGCGGCGCGGTTGCGCACGGTAGTGATCAGGTGGCGTGAGCGAAA‑CGGCTTGGTCAAAAAGTCATCACCGCCTTCGCTCATGGCATCCAGTTGCTTGTCCAGgtc                                                                                                                              <  1:161693/149‑1 (MQ=255)                         gTCAGGCTGTCGCGGACCATGCGTGCCTTCAAATGGCGGGCGCGGGCGGCGCGGTTGCGCACGGTAGTGATCAGGTGGCGTGAGCGAAA‑CGGCTTGGTCAAAAAGTCATCACCGCCTTCGCTCATGGCATCCAGTTGCTTGTCCAGgtc                                                                                                                              >  5:120136/1‑149 (MQ=255)                                  tCGCGGACCATGCGTGCCTTCAAATGGCGGGCGCGGGCGGCGCGGTTGCGCACGGTAGTGATCAGGTGGCGTGAGCGAAA‑CGGCTTGGTCAAAAAGTCATCACCGCCTTCGCTCATGGCATCCAGTTGCTTGTCCAGGTCGTCCTCGGc                                                                                                                     <  6:11538/149‑1 (MQ=255)                                    gcgGACCATGCGTGCCTTCAAATGGCGGGCGCGGGCGGCGCGGTTGCGCACGGTAGTGATCAGGTGGCGTGAGCGAAA‑CGGCTTGGTCAAAAAGTCATCACCGCCTTCGCTCATGGCATCCAGTTGCTTGTCCAGGTCGTCCTCGGCa                                                                                                                    <  2:139189/148‑1 (MQ=255)                                    gcgGACCATGCGTGCCTTCAAATGGCGGGCGCGGGCGGCGCGGTTGCGCACGGTAGTGATCAGGTGGCGTGAGCGAAA‑CGGCTTGGTCAAAAAGTCATCACCGCCTTCGCTCATGGCATCCAGTTGCTTGTCCAGGTCGTCCTCGGCa                                                                                                                    <  7:168702/148‑1 (MQ=255)                                         ccATGCGTGCCTTCAAATGGCGGGCGCGGGCGGCGCGGTTGCGCACGGTAGTGATCAGGTGGCGTGAGCGAAA‑CGGCTTGGTCAAAAAGTCATCACCGCCTTCGCTCATGGCATCCAGTTGCTTGTCCAGGTCGTCCTCGGcaggcagg                                                                                                              <  1:25710/149‑1 (MQ=255)                                           aTGCGTGCCTTCAAATGGCGGGCGCGGGCGGCGCGGTTGCGCACGGTAGTGATCATGTGGCGTGAGCGAAA‑CGGCTTGGTCAAAAAGTCATCACCGCCTTCGCTCATGGCATCCAGTTGCTTGTCCAGGTCGTCCTCGGCAGACAGGTa                                                                                                            <  5:341762/149‑1 (MQ=255)                                                   cTTCAAATGGCGGGCGCGGGCGGCGCGGTTGCGCACGGTAGTGATCAGGTGGCGTGAGCGAAA‑CGGCTTGGTCAAAAAGTCATCACCGCCTTCGCTCATGGCATCCAGTTGCTTGTCCAGGTCGTCCTCGGCAGACAGGTAGATGATCg                                                                                                    >  1:80753/1‑149 (MQ=255)                                                    ttCAAATGGCGGGCGCGGGCGGCGCGGTTGCGCACGGTAGTGATCAGGTGGCGTGAGCGAAA‑CGGCTTGGTCAAAAAGTCATCACCGCCTTCGCTCATGGCATCCAGTTGCTTGTCCAGGTCGTCCTCGGCAGACAGGt                                                                                                             >  7:148387/1‑139 (MQ=255)                                                    ttCAAATGGCGGGCGCGGGCGGCGCGGTTGCGCACGGTAGTGATCAGGTGGCGTGAGCGAAA‑CGGCTTGGTCAAAAAGTCATCACCGCCTTCGCTCATGGCATCCAGTTGCTTGTCCAGGTCGTCCTCGGCAGACAGGt                                                                                                             <  8:148387/139‑1 (MQ=255)                                                        aaTGGCGGGCGCGGGCGGCGCGGTTGCGCACGGTAGTGATCAGGTGGCGTGAGCGAAA‑CGGCTTGGTCAAAAAGTCATCACCGCCTTCGCTCATGGCATCCAGTTGCTTGTCCAGGTCGTCCTCGGCAGACAGGTAGATGATCGGcac                                                                                                >  2:179255/1‑148 (MQ=255)                                                          tGGCGGGCGCGGGCGGCGCGGTTGCGCACGGTAGTGATCAGGTGGCGTGAGCGAAA‑CGGCTTGGTCAAAAAGTCATCACCGCCTTCGCTCATGGCATCCAGTTGCTTGTCCAGGTCGTCCTCGGCAGACAGGTAGATGATCGGCACACt                                                                                             >  6:284261/1‑149 (MQ=255)                                                            gcgggcgcgggcGGCGCGGTTGCGCACGGTAGTGATCAGGTGGCGTGAGCGAAA‑CGGCTTGGTCAAAAAGTCATCACCGCCTTCGCTCATGGCATCCAGTTGCTTGTCCAGGTCGTCCTCGGCAGACAGGTAGATGATCGGCACACTc                                                                                            <  4:204964/148‑1 (MQ=255)                                                             cgggcgcgggcgGCGCGGTTGCGCACGGTAGTGATCAGGTGGCGTGAGCGAAA‑CGGCTTGGTCAAAAAGTCATCACCGCCTTCGCTCATGACATCCAGTTGCTTGTCCAGGTCGTCCTCGGCAGACAGGTAGATGATCGGCACACTcac                                                                                          <  4:308797/149‑1 (MQ=255)                                                                  gcgggcggCGCGGTTGCGCACGGTAGTGATCAGGTGGCGTGAGCGAAA‑CGGCTTGGTCAAAAAGTCATCACCGCCTTCGCTCATGGCATCCAGTTGCTTGTCCAGGTCGTCCTCGGCAGACAGGTAGATGATCGGCACACTCACATAAc                                                                                     <  3:45737/149‑1 (MQ=255)                                                                        ggcgCGGTTGCGCACGGTAGTGATCAGGTGGCGTGAGCGAAA‑CGGCTTGGTCAAAAAGTCATCACCGCCTTCGCTCATGGCATCCAGTTGCTTGTCCAGGTCGTCCTCGGCAGACAGGTAGATGATCGGCACACTCACATAACGGTCAc                                                                               >  3:15457/1‑149 (MQ=255)                                                                            cgGTTGCGCACGGTAGTGATCAGGTGGCGTGAGCGAAA‑CGGCTTGGTCAAAAAGTCATCACCGCCTTCGCTCATGGCATCCAGTTGCTTGTCCAGGTCGTCCTCGGCAGACAGGTAGATGATCGGCACACTCACATAACGGTCACtgtg                                                                           <  3:293159/149‑1 (MQ=255)                                                                                  cgcACGGTAGTGATCAGGTGGCGTGAGCGAAA‑CGGCTTGGTCAAAAAGTCATCACCGCCTTCGCTCATGGCATCCAGTTGCTTGTCCAGGTCGTCCTCGGCAGACAGGTAGATGATCGGCACACTCACATAACGGTCACTGTGGCGGa                                                                      <  5:243663/148‑1 (MQ=255)                                                                                      aggTAGTGAGCAGGTGGCGTGAGCGAAA‑CTGATTGGTGAAAATGTCATCACCGACTTCGCTCATGTCATCCAGTTGCTTGTCCATGTCGTCCTCGGCAGAGAGGTATATGATCGGCACACTCACATAACTTTCACTGTGGCTGATTAcc                                                                 <  3:136420/148‑1 (MQ=255)                                                                                        gTAGTGATCAGGTGGCGTGAGCGAAA‑CGGCTTGGTCAAAAAGTCATCACCGCCTTCGCTCATGGCATCCAGTTGCTTGTCCAGGTCGTCCTCGGCAGACAGGTAGATGATCGGCACACTCACATAACGGTCACTGTGGCGGATTACCtt                                                               <  6:9194/149‑1 (MQ=255)                                                                                         tAGTGATCAGGTGGCGTGAGCGAAA‑CGGCTTGGTCAAAAAGTCATCACCGCCTTCGCTCATGGCATCCAGTTGCTTGTCCAGGTCGTCCTCGGCAGACAGGTAGATGATCGGCACACTCACATAACGGTCACTGTGGCGGATTACCTTg                                                              <  5:284261/149‑1 (MQ=255)                                                                                                 aGGTGGCGTGAGCGAAA‑CGGCTTGGTCAAAAAGTCATCACCGCCTTCGCTCATGGCATCCAGTTGCTTGTCCAGGTCGTCCTCGGCAGACAGGTAGATGATCGGCACACTCACATAACGGTCACTGTGGCGGATTACCTTGGCCAGCTc                                                      <  4:15457/149‑1 (MQ=255)                                                                                                  ggTGGCGTGAGCGAAA‑CGGCTTGGTCAAAGAGTCATCACCGCCTTCGCTCATGGCATCCAGTTGCTTGTCCAGGTCGTCCTCGGCAGACAGGTAGATGATCGGCACACTCACATAACGGTCACTGTGGCGGATTACCTTGGCCAGCTcc                                                     >  6:322441/1‑149 (MQ=255)                                                                                                  ggTGGCGTGAGCGAAA‑CGGCTTGGTCAAAAAGTCATCACCGCCTTCGCTCATGGCATCCAGTTGCTTGTCCAGGTCGTCCTCGGCAGACAGGTAGATGATCGGCACACTCACATAACGGTCACTGTGGCGGATTACCTTGGCCAGCTcc                                                     >  3:89755/1‑149 (MQ=255)                                                                                                      gCGTGAGCGAAA‑CGGCTTGGTCAAAAAGTCATCACCGCCTTCGCTCATGGCATCCAGTTGCTTGTCCAGGTCGTCCTCGGCAGACAGGTAGATGATCGGCACACTCACATAACGGTCACTGTGGCGGATTACCTTGGCCAGCTCCGGGc                                                 <  6:120136/149‑1 (MQ=255)                                                                                                      gCGTGAGCGAAA‑CGGCTTGGTCAAAAAGTCATCACCGCCTTCGCTCATGGCATCCAGTTGCTTGTCCAGGTCGTCCTCGGCAGACAGGTAGATGATCGGCACACTCACATAACGGTCACTGTGGCGGATTACCTTGGCCAGCTCCGGGc                                                 >  3:154826/1‑149 (MQ=255)                                                                                                       catgagcgaaggcggtgatgactttttgaccaagccgttttcgctcaTGGCATCCAGTTGCTTGTCCAGGTCGTCCTCGGCAGACAGGTAGATGATCGGCACACTCACATAACGGTCACTGTGGCGGATTACCTTGGCCAGCTCCGGGc                                                 >  1:67968‑M2/48‑149 (MQ=255)                                                                                                        catgagcgaaggcggtgatgactttttgaccaagccgtttcgctcaTGGCATCCAGTTGCTTGTCCAGGTCGTCCTCGGCAGACAGGTAGATGATCGGCACACTCACATAACGGTCACTGTGGCGGATTACCTTGGCCAGCTCCGGGcc                                                >  5:134617‑M2/47‑149 (MQ=255)                                                                                                         atgagcgaaggcggtgatgactttttgaccaagccgtttcgctcaTGGCATCCAGTTGCTTGTCCAGGTCGTCCTCGGCAGACAGGTAGATGATCGGCACACTCACATAACGGTCACTGTGGCGGATTACCTTGGCCAGCTCCGGGCCg                                               >  4:362966‑M2/46‑149 (MQ=255)                                                                                                             CGAAA‑CGGCTTGGTCAAAAAGTCATCACCGCCTTCGCTCATGGCATCCAGTTGCTTGTCCAGGTCGTCCTCGGCAGACAGGTAGATGATCGGCACACTCACAt                                                                                        <  3:57428‑M1/103‑1 (MQ=255)                                                                                                             CGAAA‑CGGCTTGGTCAAAAAGTCATCACCGCCTTCGCTCATGGCATCCAGTTGCTTGTCCAGGTCGTCCTCGGCAGACAGGTAGATGATCGGCACACTCACAt                                                                                        >  4:57428‑M1/1‑103 (MQ=255)                                                                                                              GAAA‑CGGCTTGGTCAAAGAGTCATCACCGCCTTCGCTCATGGCATCCAGTTGCTTGTCCAGGTCGTCCTCGGCAGACAGGTAGATGATCGGCACACTCACATAACGGTCACTGTGGCGGATTACCTTGGCCAGCTCCGGGCCGGTGCAg                                         >  5:322441‑M1/1‑149 (MQ=255)                                                                                                               gaaggcggtgatgactttttgaccaagccgtttcgctcaTGGCATCCAGTTGCTTGTCCAGGTCGTCCTCGGCAGACAGGTAGATGATCGGCACACTCACATAACGGTCACTGTGGCGGATTACCTTGGCCAGCTCCGGGCCGGTGCAg                                         <  6:134617‑M2/110‑1 (MQ=255)                                                                                                               AAA‑CGGCTTCGTCAAAAAGTCATCACCGCCTTCGCTCATGGCATCCAGTTGCTTGTCCAGGTCGTCCTCGGCAGACAGGTAGATGATCGGCACACTCACATAACGGTCACTGTGGCGGATTACCTTGGCCTGCACcggcccggagctgg                                        >  2:85640‑M1/1‑143 (MQ=255)                                                                                                                AA‑CGGCTTGGTCAAAAAGTCATCACCGCCTTCGCTCATGGCATCCAGTTGCTTGTCCAGGTCGTCCTCGGCAGACAGGTAGATGATCGGCACACTCACATAACGGTCACTGTGGCGGATTACCTTGGCCAGCTCCGGGCCGGTGCAGGc                                       <  2:42431‑M1/149‑1 (MQ=255)                                                                                                                 a‑CGGCTTGGTCAAAAAGGCATCACCGCCTTCGCTCATGGCATCCAGTTGCTTGTCCAGGGCGTCCTCGGCAGACAGGTAGATGATCGGCACACTCACATAACGGTCACTGTGGCGGATTACCTTGGCCTGCACCGGCCCGGAGCTGGcc                                      <  4:262343/149‑1 (MQ=255)                                                                                                                          gTCAAAAAGTCATCACCGCCTTCGCTCATGGCATCCAGTTGCTTGTCCAGGTCGTCCTCGGCAGACAGGTAGATGATCGGCACACTCACATAACGGTCACTGTGGCGGATTACCTTGGCCAGCTCCGGGCCGGTGCAGGCCGGCATGTa                              >  4:92941/1‑149 (MQ=255)                                                                                                                            cAAAAAGTCATCACCGCCTTCGCTCATGGCATCCAGTTGCTTGTCCAGGTCGTCCTCCGCAGACAGGTAGATCATCGGCACACTCACATAACGGTCACTGTGCCGCATAACCTTGGCCAGCTCCGGGCCGTTGCAGTCCGGCAAGTACa                            >  3:101347/1‑149 (MQ=255)                                                                                                                            cAAAAAGTCAACACCGCCTTCGCTCATGGCATCCAGTTGCTTGTCCAGGTCGTCCTCGGCAGACAGGTAGATGATCGGCACACTCACATAACGGTCACTGTGGCGGATTACCTTGGCCAGCTCCGGGCCGGTGCAGGCCGGCATGTa                              >  4:276105/1‑147 (MQ=255)                                                                                                                             aaaaaGTCATCACCGCCTTCGCTCATGGCATCCAGTTGCTTGTCCAGGTCGTCCTCGGCAGACAGGTAGATGATCGGCACACTCACATAACGGTCACTGTGGCGGATTACCTTGGCCAGCTCCGGGCCGGTGCAGGCCGGCa                                  <  8:295870/142‑1 (MQ=255)                                                                                                                             aaaaaGTCATCACCGCCTTCGCTCATGGCATCCAGTTGCTTGTCCAGGTCGTCCTCGGCAGACAGGTAGATGATCGGCACACTCACATAACGGTCACTGTGGCGGATTACCTTGGCCAGCTCCGGGCCGGTGCAGGCCGGCATGTACa                            <  4:10847/148‑1 (MQ=255)                                                                                                                             aaaaaGTCATCACCGCCTTCGCTCATGGCATCCAGTTGCTTGTCCAGGTCGTCCTCGGCAGACAGGTAGATGATCGGCACACTCACATAACGGTCACTGTGGCGGATTACCTTGGCCAGCTCCGGGCCGGTGCAGGCCGGCATGTACa                            <  1:42431/148‑1 (MQ=255)                                                                                                                             aaaaaGTCATCACCGCCTTCGCTCATGGCATCCAGTTGCTTGTCCAGGTCGTCCTCGGCAGACAGGTAGATGATCGGCACACTCACATAACGGTCACTGTGGCGGATTACCTTGGCCAGCTCCGGGCCGGTGCAGGCCGGCATGTACAg                           >  3:127877/1‑149 (MQ=255)                                                                                                                             aaaaaGTCATCACCGCCTTCGCTCATGGCATCCAGTTGCTTGTCCAGGTCGTCCTCGGCAGACAGGTAGATGATCGGCACACTCACATAACGGTCACTGTGGCGGATTACCTTGGCCAGCTCCGGGCCGGTGCAGGCCGGCATGTACAg                           >  8:101222/1‑149 (MQ=255)                                                                                                                             aaaaaGTCATCACCGCCTTCGCTCATGGCATCCAGTTGCTTGTCCAGGTCGTCCTCGGCAGACAGGTAGATGATCGGCACACTCACATAACGGTCACTGTGGCGGATTACCTTGGACAGCTCCGGGCCGGTGCAGGCCGGCa                                  >  7:295870/1‑142 (MQ=255)                                                                                                                             aaaaaGTCATCACCGCCTTCGCTCATGGCATCCAGTTGCTTGTCCAGGTCGTACTCGGCAGACAGGTAGATGATCGGCACACTCACATAACGGTCACTGTGGCGGATTACCTTGGCCAGCTCCGGGCCGGTGCAGGCCGGCATGTACAg                           >  8:279723/1‑149 (MQ=255)                                                                                                                                   tcatcaCCGCCTTCGCTCATGGCATCCAGTTGCTTGTCCAGGTCGTCCTCGGCAGACAGGTAGATGATCGGCACACTCACATAACGGTCACTGTGGCGGATTACCTTGGCCAGCTCCGGGCCGGTGCAGGCCGGCATGTACAGGTCGAg                     <  7:279723/149‑1 (MQ=255)                                                                                                                                     atcaCCGCCTTCGCTCATGGCATCCAGTTGCTTGTCCAGGTCGTCCTCGGCAGACAGGTAGATGATCGGCACACTCACATAACGGTCACtgtg                                                                           >  2:270389/1‑93 (MQ=255)                                                                                                                                     atcaCCGCCTTCGCTCATGGCATCCAGTTGCTTGTCCAGGTCGTCCTCGGCAGACAGGTAGATGATCGGCACACTCACATAACGGTCACTGTGGCGGATTACCTTGGCCAGCTCCGGGCCGGTGCAGGCCGGCATGTACAGGTCGAgg                    <  6:283805/148‑1 (MQ=255)                                                                                                                                     atcaCCGCCTTCGCTCATGGCATCCAGTTGCTTGTCCAGGTCGTCCTCGGCAGACAGGTAGATGATCGGCACACTCACATAACGGTCACTGTGGCGGATTACCTTGGCCAGCTCCGGGCCGGTGCAGGCCGGCATGTACAGGTCGAgg                    >  5:283805/1‑148 (MQ=255)                                                                                                                                      tcaCCGCCTTCGCTCATGGCATCCAGTTGCTTGTCCAGGTCGTCCTCGGCAGACAGGTAGATGATCGGCACACTCACATAACGGTCACTGTGGCGGATTACCTTGGc                                                            >  6:156322/1‑107 (MQ=255)                                                                                                                                      tcaCCGCCTTCGCTCATGGCATCCAGTTGCTTGTCCAGGTCGTCCTCGGCAGACAGGTAGATGATCGGCACACTCACATAACGGTCACTGTGGCGGATTACCTTGGc                                                            <  5:156322/107‑1 (MQ=255)                                                                                                                                      tcaCCGCCTTCGCTCATGGCATCCAGTTGCTTGTCCAGGTCGTCCTCGGCAGACAGGTAGATGATCGGCACACTCACATAACGGTCACTGTGGCGGATTACCTTGGCCAGCTCCGGGCCGGTGCAGGCCGGCATGTACAGGTCGAGgat                  >  5:70886/1‑149 (MQ=255)                                                                                                                                        aCCGCCTTCGCTCATGGCATCCAGTTGCTTGTCCATGTCGTCCTCGGCAGACAGGTAGATTATCGGCACACTCACATAACGGTCACTGTGGCGGATTACCTTGGCCAGCTCCGGGCCGGTGCAGGCCGGCATGTACAGGTCGAGgatga                <  4:312300/149‑1 (MQ=255)                                                                                                                                          cGCCTTCGCTCATGGCATCCAGTTGCTTGTCCAGGTCGTCCTCGGCAGACAGGTAGATGATCGGCACACTCACATAACGGTCACTGTGGCGGATTACCTTGGCCAGCTCCGGGCCGGTGCAGGCCGGCATGTACAGGTCGAGgatgat               >  6:212034/1‑148 (MQ=255)                                                                                                                                          cGCCTTCGCTCATGGCATCCAGTTGCTTGTCCAGGTCGTCCTCGGCAGACAGGTAGATGATCGGCACACTCACATAACGGTCACTGTGGCGGATTACCTTGGCCAGCTCCGGGCCGGTGCAGGCCGGCATGTACAGGTCGAGgatgat               >  1:203241/1‑148 (MQ=255)                                                                                                                                          cGCCTTCGCTCATGGCATCCAGTTGCTTGTCCAGGTCGTCCTCGGCAGACAGGTAGATGATCGGCACACTCACATAACGGTCACTGTGGCGGATTACCTTGGCCAGCTCCGGGCCGGTGCAGGCCGGCATGTACAGGTCGAGgatgat               >  6:33149/1‑148 (MQ=255)                                                                                                                                            ccTTCGCTCATGGCATCCAGTTGCTTGTCCAGGTCGTCCTCGGCAGACAGGTAGATGATCGGCACACTCACATAACGGTCACTGTGGCGGATTACCTTGGCCAGCTCCGGGCCGGTGCAGGCCGGCATGTACAGGTCGAGGATGATCAg            <  7:18766/149‑1 (MQ=255)                                                                                                                                             cTTCGCTCATGGCATCCAGTTGCTTGTCCAGGTCGTCCTCGGCAGACAGGTAGATGATCGGCACACTCACATAACGGTCACTGTGGCGGATTACCTTGGCCAGCTCCGGGCCGGTGCAGGCCGGCATGTACAGGTCGAGGATGATCAgg           <  7:101222/149‑1 (MQ=255)                                                                                                                                                  ctcaTGGCATCCAGTTGCTTGTCCAGGTCGTCCTCGGCAGACAGGTAGATGATCGGCACACTCACATAACGGTCACTGTGGCGGATTACCTTGGCCAGCTCCGGGCCGGTGCAGGCCCGCATGTACAGGTCGAGGATGATCAGGTCggg      >  5:284618‑M2/5‑149 (MQ=255)                                                                                                                                                   tcaTGGCATCCAGTTGCTTGTCCAGGTCGTCCTCGGCAGACAGGTAGATGATCGGCACACTCACATAACGGTCACTGTGGCGGATTACCTTGGCCAGCTCCGGGCCGGTGCAGGCCGGCATGTACAGGTCGAGGATGATCAGGTCGGGc     >  7:222001‑M2/4‑149 (MQ=255)                                                                                                                                                   tcaTGGCATCCAGTTGCTTGTCCAGGTCGTCCTCGGCAGACAGGTAGATGATCGGCACACTCACATAACGGTCACTGTGGCGGATTACCTTGGCCAGCTCCGGGCCGGTGCAGGCCGGCATGTACAGGTCGAGGATGATCAGGTCGGGc     >  4:53630‑M2/4‑149 (MQ=255)                                                                                                                                                      tGGCATCCAGTTGCTTGTCGAGGTCTTCCTCGGCAGACAGGTAGTTGATCGGCACACTCACATAACGGTCACTGTGGCGGATTACCTTGGCCAGCTCCGGGCCGGTGCAGGCCGGCATGTACAGGTCGAGGATGATCAGGTCGGGCTgg  <  5:316786/149‑1 (MQ=255)                                                                                                                                                      tGGCATCCAGTTGCTTGTCCAGGTCGTCCTCGGCAGACAGGTAGATGATCGGCACACTCACATAACGGTCACTGTGGCGGATTACCTTGGCCAGCTCCGGGCCGGTGCAGGCCGGCATGTACAGGTCGAGGATGATCAGGTCGGGCTgg  <  8:222001/149‑1 (MQ=255)                                                                                                                                                      |                                                                                                                                                     ATATGAGTGTGGTTGTACAGCCCGGTCAGGCTGTCGCGGACCATGCGTGCCTTCAAATGGCGGGCGCGGGCGGCGCGGTTGCGCACGGTAGTGATCAGGTGGCGTGAGCGAAA‑CGGCTTGGTCAAAAAGTCATCACCGCCTTCGCTCATGGCATCCAGTTGCTTGTCCAGGTCGTCCTCGGCAGACAGGTAGATGATCGGCACACTCACATAACGGTCACTGTGGCGGATTACCTTGGCCAGCTCCGGGCCGGTGCAGGCCGGCATGTACAGGTCGAGGATGATCAGGTCGGGCTGG  >  NC_002947/655435‑655731

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.