New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 906270	52 (0.860)	3 (0.050)	3/252	NT	5.8%	coding (281/573 nt)	ampD	N‑acetyl‑anhydromuramyl‑L‑alanine‑amidase
	?	NC_002947	= 906325	48 (0.840)					coding (336/573 nt)	ampD	N‑acetyl‑anhydromuramyl‑L‑alanine‑amidase

GCCTGTTTCGGCACGGGCAAGGTGCAGCAATTCTTCCAGAACCGCCTGGCCCCTGATGAACACCCGTATTTTGCCAGCATCAACCACCTGACCGTGTCGGCGCACCTGTTCGTCGAGCGTGACGGCGCGGTGACTCAGTTCGTGTCGTTGCATGACCGTGCCTGGCATGCGGGTGTGTCGAGCTTTGACGGGCGCGAAGGCTGTAACGACTTTTCCATCGGCATCGAGCTGGAAGGCACCGACGACCTGCCCTATACCGATGCCCAGTATGCGGTGCTGGAGCAACTCACCCGGC  >  NC_002947/906122‑906416                                                                                                                                                     |                                                                                                                                                   gCCTGTTTCGGCACGGGCAAGGTGCAGCAATTCTTCCAGAACCGCCTGGCCCCTGATGAACACCCGTATTTTGCCAGCATCAACCCCCTGACCGTGTCGGCGCACCTGTTCGTCGAGCGTGACGGCGCGGTGACTCAGTTCGTGTCGTT                                                                                                                                                    >  6:140786‑M1/1‑149 (MQ=255) gCCTGTTTCGGCACGGGCAAGGTGCAGCAATTCTTCCAGAACCGCCTGGCCCCTGATGAACACCCGTATTTTGCCAGCATCAACCACCTGACCGTGTCGGCGCACCTGTTCGTCGAGCGTGACGGCGCGGTGACTCAGTTCGTGTCGTT                                                                                                                                                    <  8:89024‑M1/149‑1 (MQ=255) gCCTGTTTCGGCACGGGCAAGGTGCAGCAATTCTTCCAGAACCGCCTGGCCCCTGATGAACACCCGTATTTTGCCAGCATCAACCACCTGACCGTGTCGGCGCACCTGTTCGTCGAGCGTGACGGCGCGGTGACTCAGTTCGTGTCGTT                                                                                                                                                    <  5:269562‑M1/149‑1 (MQ=255) gCCTGTTTCGGCACGGGCAAGGTGCAGCAATTCTTCCAGAACCGCCTGGCCCCTGATGAACACCCGTATTTTGCCAGCATCAACCACCTGACCGTGTCGGCGCACCTGTTCGTCGAGCGTGACGGCGCGGTGACTCAGTTCGTGTCGTT                                                                                                                                                    <  1:57989‑M1/149‑1 (MQ=255)   cTGTTTCGGCACGGGCAAGGTGCAGCAATTCTTCCAGAACCGCCTGGCCCCTGATGAACACCCGTATTTTGCCAGCATCAACCACCTGACCGTGTCGGCGCACCTGTTCGTCGAGCGTGACGGCGCGGTGACTCAGTTCGTGTCGTTGc                                                                                                                                                  <  6:249816/149‑1 (MQ=255)    tGTTTCGGCACGGGCAAGGTGCAGCAATTCTTCCAGAACCGCCTGGCCCCTGATGAACACCCGTATTTTGCCAGCATCAACCACCTGACCGTGTCGGCGCACCTGTTCGTCGAGCGTGACGGCGCGGTGACTCAGTTCGTGTCGTTGCa                                                                                                                                                 >  1:70072/1‑149 (MQ=255)                      gTGCAGCAATTCTTCCAGAACCGCCTGGCCCCTGATGAACACCCGTATTTTGCCAGCATCAACCACCTGACCGTGTCGGCGCACCTGTTCGTCGAGCGTGACGGCGCGGTGACTCAGTTCGTGTCGTTGCATGACCGTGCCTGGCATGc                                                                                                                               >  2:76929/1‑149 (MQ=255)                      gTGCAGCAATTCTTCCAGAACCGCCTGGCCCCTGATGAACACCCGTATTTTGCCAGCATCAACCACCTGACCGTGTCGGCGCACCTGTTCGTCGAGCGTGACGGCGCGGTGACTCAGTTCGTGTCGTTGCATGACCGTGCCTGGCATGc                                                                                                                               <  4:86705/149‑1 (MQ=255)                        gcagcaATTCTTCCAGAACCGCCTGGCCCCTGATGAACACCCGTATTTTGCCAGCATCAACCACCTGACCGTGTCGGCGCACCTGTTCGTCGAGCGTGACGGCGCGGTGACTCAGTTCGTGTCGTTGCATGACCGTGCCTGGCATGCgg                                                                                                                             >  2:206728/1‑149 (MQ=255)                         cagcaATTCTTCCAGAACCGCCTGGCCCCTGATGAACACCCGTATTTTGCCAGCATCAACCACCTGACCGTGTCGGCGCACCTGTTCGTCGAGCGTGACGGCGCGGTGACTCAGTTCGTGTCGTTGCATGACCGTGCCTGGCATGCggg                                                                                                                            >  2:359704/1‑149 (MQ=255)                          agcaATTCTTCCAGAACCGCCTGGCCCCTGATGAACACCCGTATTTTGCCAGCATCAACCACCTGACCGTGTCGGTGCACCTGTTCGTCGAGCGTGACGGCGCGGTGACTCAGTTCGTGTCGTTGCATGACCGTGCCTGGCATGCGGgt                                                                                                                           >  1:192854/1‑149 (MQ=255)                          agcaATTCTTCCAGAACCGCCTGGCCCCTGATGAACACCCGTATTTTGCCAGCATCAACCACCTGACCGTGTCGGCGCACCTGTTCGTCGAGCGTGACGGCGCGGTGACTCAGTTCGTGTCGTTGCATGACCGTGCCTGGCATGCGGgt                                                                                                                           <  4:150092/149‑1 (MQ=255)                            caATTCTTCCAGAACCGCCTGGCCCCTGATGAACACCCGTATTTTGCCAGCATCAACCACCTGACCGTGTCGGTGCACCTGTTCGTCGAGCGTGACGGCGCGGTGACTCAGTTCGTGTCGTTGCATGACCGTGCCTGGCATGCGGgtgt                                                                                                                         <  2:192854/149‑1 (MQ=255)                            caATTCTTCCAGAACCGCCTGGCCCCTGATGAACACCCGTATTTTGCCAGCATCAACCACCTGACCGTGTCGGCGCACCTGTTCGTCGAGCGTGACGGCGCGGTGACTCAGTTCGTGTCGTTGCATGACCGTGCCTGGCATGCGGgtgt                                                                                                                         >  8:97983/1‑149 (MQ=255)                            caATTCTTCCAGAACCGCCTGGCCCCTGATGAACACCCGTATTTTGCCAGCATCAACCACCTGACCGTGTCGGCGCACCTGTTCGTCGAGCGTGACGGCGCGGTGACTCAGTTCGTGTCGTTGCATGACCGTGCCTGGCATGCGGgtgt                                                                                                                         <  1:359351/149‑1 (MQ=255)                                 cttcCAGAACCGCCTGGCCGCTGATGAACACCCGTATTTTGCCAGCATCAACCACCTGACCGTGTCGGCGAACCTGTTCGTCGAGCGTGACGCCGCGGTGACTCAGTTCGTGTCGTTGCATGACCGTGCCTGGCATGCGGGTGTGTc                                                                                                                      >  2:246716/1‑147 (MQ=255)                                    ccAGAACCGCCTGGCCCCTGATGAACACCCGTATTTTGCCAGCATCAACCACCTGACCGTGTCGGCGCACCTGTTCGTCGAGCGTGACGGCGCGGTGACTCAGTTCGTGTCGTTGCATGACCGTGCCTGGCATGCGGGTGTGTCGa                                                                                                                    <  8:264382/146‑1 (MQ=255)                                     cAGAACCGCCTGGCCCCTGATGAACACCCGTATTTTGCCAGCATCATCCACCTGACCGTGTCGGCTCACCTGTTCGTCGAGCGTGACGGCGCGGTGACTCAGTTCGTGTCGTTGCATGACCTTGCCTGGCATGCGGGTGTGTCGAGCt                                                                                                                 <  6:2927/148‑1 (MQ=255)                                      aGAACCGCCTGGCCCCTGATGAACACCCGTATTTTGCCAGCATCAACCACCTGACCGTGTCGGCGCACCTGTTCGTCGAGCGTGACGGCGCGGTGACTCAGTTCGTGTCGTTacagccttcgcgcccgtcaaagctcgacacacccgc                                                                                                                >  4:290715‑M1/1‑112 (MQ=255)                                      aGAACCGCCTGGCCCCTGATGAACACCCGTATTTTGCCAGCATCAACCACCTGACCGTGTCGGCGCACCTGTTCGTCGAGCGTGACGGCGCGGTGACTCAGTTCGTGTCGTTGCATGACCGTGCCTGGCATGCGGGTGTGTCGAGCttt                                                                                                               <  1:1644/149‑1 (MQ=255)                                      aGAACCGCCTGGCCCCTGATGAACACCCGTATTTTGCCAGCATCAACCACCTGACCGTGTCGGCGCACCTGTTCGTCGAGCGTGACGGCGCGGTGACTCAGTTCGTGTCGTTGCATGACCGTGCCTGGCATGCGGGTGTGTCGAGCttt                                                                                                               <  3:321177/149‑1 (MQ=255)                                         aCCGCCTGGCCCCTGATGAACACCCGTATTTTGCCAGCATCAACCACCTGACCGTGTCGGCGCACCTGTTCGTCGAGCGTGACGGCGCGGTGACTCAGTTCGTGTCGTTGCATGACCGTGCCTGGCATGCGGGTGTGTCGAGCTTTGAc                                                                                                            <  3:274577/149‑1 (MQ=255)                                          ccGCCTGGCCCCTGATGAACACCCGTATTTTGCCAGCATCAACCACCTGACCGTGTCGGCGCACCTGTTCGTCGAGCGCGACGGCGCGGTGACTCAGTTCGTGTCGTTGCATGACCGTGCCTGGCATGCGGGTGTGTCGa                                                                                                                    <  5:194239/140‑1 (MQ=255)                                          ccGCCTGGCCCCTGATGAACACCCGTATTTTGCCAGCATCAACCACCTGACCGTGTCGGCGCACCTGTTCGTCGAGCGAGACGGCGCGGTGACTCAGTTCGTGTCGTTGCATGACCGTGCCTGGCATGCGGGTGTGTCGa                                                                                                                    >  6:194239/1‑140 (MQ=255)                                          ccGCCTGGCCCCCGATGAACACCCGGATTTTGCCAGCATCAACCACCTGACCGTGTCGGCGCACCTGTTCGTCGAGCGTGACGGCGCGGTGACTCAGTTCGTGTCGTTGCATGACCGTACCTGGCATGCGGGTGTGTCGAGCTTTGACg                                                                                                           <  8:285132/149‑1 (MQ=255)                                                  ccccTGATGAACACCCGTATTTTGCCAGCATCAACCACCTGACCGTGTCGGCGCACCTGTTCGTCGAGCGTGACGGCGCGGTGACTCAGTTCGTGTCGTTGCATGACCGTGCCTGGCATGCGGGTGTGTCGAGCTTTGACGGGCGCGaa                                                                                                   <  4:56295/149‑1 (MQ=255)                                                   cccTGATGAACACCCGTATTTTGCCAGCATCAACCACCTGACCGTGTCGGCGCACCTGTTCGTCGAGCGTGACGGCGCGGTGACTCAGTTCGTGTCGTTGCATGACCGTGCCTGGCATGCGGGTGTGTCGAGCTTTGACGGGCGCGAAg                                                                                                  >  8:243090/1‑149 (MQ=255)                                                     cTGATGAACACCCGTATTTTGCCAGCATCAACCACCTGACCGGGTCGGCGCACCTGTTCGTCGAGCGTGACGGCGCGGTGACTCAGTTCGTGTCGTTGCATGACCGTGCCTGGCATGCGGGTGTGTCGAGCTTTGACGGGCGCGAAGGc                                                                                                <  5:90352/149‑1 (MQ=255)                                                        atgaACACCCGTATTTTGCCAGCATCAACCACCTGACCGTGTCGGCGCACCTGTTCGTCGAGCGTGACGGCGCGGTGACTCAGTTCGTGTCGTTGCATGACCGTGCCTGGCATGCGGGTGTGTCGAGCTTTGACGGGCGCGAAGGCt                                                                                               <  1:76929/147‑1 (MQ=255)                                                        atgaACACCCGTATTTTGCCAGCATCAACCACCTGACCGTGTCGGCGCACCTGTTCGTCGAGCGTGACGGCGCGGTGACTCAGTTCGTGTCGTTGCATGACCGTGCCTGGCATGCGGGTGTGTCGAGCTTTGACGGGCGCGAAGGCt                                                                                               <  6:264329/147‑1 (MQ=255)                                                           aaCACCCGTATTTTGCCAGCATCAACCACCTGACCGTGTCGGCGCACCTGTTCGTCGAGCGTGACGGCGCGGTGACTCAGTTCGTGTCGTTGCATGACCGTGCCTGGCATGCGGGTGTGTCGAGCTTTGACGGGCGCGAAGGCTGTaac                                                                                          >  7:183528‑M2/1‑146 (MQ=255)                                                              acCCGTATTTTGCCAGCATCAACCACCTGACCGTGTCGGCGCACCTGTTCGTCGAGCGTGACGGCGCGGTGACTCAGTTCGTGTCGTTGCATGACCGTGCCTGGCATGCGGGTGTGTCGAGCTTTGACGGGCGCGAAGGCTGTaacgac                                                                                       <  1:129471‑M2/149‑7 (MQ=255)                                                               cccGTATTTTGCCAGCATCAACCACCTGACCGTGTCGGCGCACCTGTTCGTCGAGCGTGACGGCGCGGTGACTCAGTTCGTGTCGTTacagccttcgcgcccgtcaaagctcgacacacccgcatgccaggcacggtcatgcaacgaca                                                                                      <  3:290715‑M1/149‑63 (MQ=255)                                                                ccGTATTTTGCCAGCATCAACCACCTGACCGTGTCGGCGCACCTGTTCGTCGAGCGTGACGGCGCGGTGACTCAGTTCGTGTCGTTGCATGACCGTGCCTGGCATGCGGGTGTGTCGAGCTTTGACGGGCGCGAAGGCTGTAACGACtt                                                                                     >  2:203921/1‑149 (MQ=255)                                                                ccGTATTTTGCCAGCATCAACCACCTGACCGTGTCGGCGCACCTGTTCGTCGAGCGTGACGGCGCGGTGACTCAGTTCGTGTCGTTGCATGACCGTGCCTGGCATGCGGGTGTGTCGAGCTTTGACGGGCGCGAAGGCTGTAACGACtt                                                                                     >  5:167023/1‑149 (MQ=255)                                                                ccGTATTTTGCCAGCATCAACCACCTGACCGTGTCGGCGCACCTGTTCGGCGAGCGTGACGGCGCGGTGACTCAGTTCGTGTCGTTacagccttcgcgcccgtcaaagctcgacacacccgcatgccaggcacggtcatgcaacgacac                                                                                     <  7:238816‑M1/149‑64 (MQ=255)                                                                 cGTATTTTGCCAGCATCAACCACCTGACCGTGTCGGCGCACCTGTTCGTCGAGCGTGACGGCGCGGTGACTCAGTTCGTGTCGTTGCATGACCGTGCCTGGCATGCGGGTGTGTCGAGCTTTGACGGGCGCGAAGGCTGTAACGACttt                                                                                    >  3:164116/1‑149 (MQ=255)                                                                 cGTATTTTGCCAGCATCAACCACCTGACCGTGTCGGCGCACCTGTTCGTCGAGCGTGACGGCGCGGTGACTCAGTTCGTGTCGTTGCATGACCGTGCCTGGCATGCGGGTGTGTCGAGCTTTGACGGGCGCGAAGGCTGTAACGACttt                                                                                    <  5:366329/149‑1 (MQ=255)                                                                           cAGCATCAACCACCTGACCGTGTCGGCGCACCTGTTCGTCGAGCGTGACGGCGCGGTGACTCAGTTCGTGTCGTTGCATGACCGTGCCTGGCATGCGGGTGTGTCGAGCTTTGACGGGCGCGAAGGCTGTAACGACTTTTCCATCGGCa                                                                          >  3:369093/1‑149 (MQ=255)                                                                                      accTGACCGTGTCGGCGCACCTGTTCGTCGAGCGTGACGGCGCGGTGACTCAGTTCGTGTCGTTGCATGACCGTGCCTGGCATGCGGGTGTGTCGAGCTTTGACGGGCGCGAAGGCTGTAACGACTTTTCCATCGGCATCGAGCTGGaa                                                               <  8:257213/149‑1 (MQ=255)                                                                                        cTGACCGTGTCGGCGCACCTGTTCGTCGAGCGTGACGGCGCGGTGACTCAGTTCGTGTCGTTGCATGACCGTGCCTGGCATGCGGGTGTGTCGAGCTTTGACGGGCGCGAAGGCTGTAACGACTTTTCCATCGGCATCGa                                                                      <  1:249255/140‑1 (MQ=255)                                                                                        cTGACCGTGTCGGCGCACCTGTTCGTCGAGCGTGACGGCGCGGTGACTCAGTTCGTGTCGTTGCATGACCGTGCCTGGCATGCGGGTGTGTCGAGCTTTGACGGGCGCGAAGGCTGTAACGACTTTTCCATCGGCATCGa                                                                      >  2:249255/1‑140 (MQ=255)                                                                                              gtgtCGGCGCACCTGTTCGTCGAGCGTGACGGCGCGGTGACTCAGTTCGTGTCGTTGCATGACCGTGCCTGGCATGCGGGTGTGTCGAGCTTTGACGGGCGCGAAGGCTGTAACGACTTTTCCATCGGCATCGAGCTGGAAGGCACcga                                                       <  3:309797/149‑1 (MQ=255)                                                                                                gtCGGCGCACCTGTTCGTCGAGCGTGACGGCGCGGTGACTCAGTTCGTGTCGTTGCATGACCGTGCCTGGCATGCgg                                                                                                                             <  2:284715/77‑1 (MQ=255)                                                                                                gtCGGCGCACCTGTTCGTCGAGCGTGACGGCGCGGTGACTCAGTTCGTGTCGTTGCATGACCGTGCCTGGCATGCgg                                                                                                                             >  1:284715/1‑77 (MQ=255)                                                                                                   ggCGCACCTGTTCGTCGAGCGTGACGGCGCGGTGACTCAGTTCGTGTCGTTGCATGACCGTGCCTGGCATGCGGGTGTGTCGAGCTTTGACGGGCGCGAAGGCTGTAACGACTTTTCCATCGGCATCGAGCTGGAAGGCACCgacgac                                                   <  7:97983/148‑1 (MQ=255)                                                                                                    gcgcACCTGTTCGTCGAGCGTGACGTCGCGGTGACTCAGTTCGTCTAGTTCCATGACCTAGCATGGCATGCGGTTGTGTCGAGCTTTGACGGGCGCGAAGGCTGTAACGACTTTTCCATCGGCATCGAGCTGGAAGGCAACGACGACCt                                                 <  2:74391/149‑1 (MQ=255)                                                                                                    gcgcACCTGTTCGTCGAGCGTGACGGCGCGGTGACTCAGTTCGTGTCGTTGCATGACCGTGCCTGGCATGCGGGTGTGTCGAGCTTTGACGGGCGCGAAGGCTGTAACGACTTTTCCATCGGCATCGAGCTGGAAGGCACCGACGACCt                                                 <  4:324602/149‑1 (MQ=255)                                                                                                        aCCTGTTCGTCGAGCGTGACGGCGCGGTGACTCAGTTCGGGTCGTTGCATGACCGTGCCTGGCATGCGGGTGTGTCGAGATTTGACGGGCGCGAAGGCTGTAACGACTTTTCCATCGGCATCGAGCTTGAAGGCACCGACGACCTGc                                               <  2:253650/147‑1 (MQ=255)                                                                                                         ccTGTTCGTCGAGCGTGACGGCGCGGTGACTCAGTTCGTGTCGTTGCATGACCGTGCCTGGCATGCGGGTGTGTCGAGCTTTGACGGGCGCGAAGGCTGTAACGACTTTTCCATCGGCATCGAGCTGGAAGGCACCGACGACCTGCCCt                                            <  1:246716/149‑1 (MQ=255)                                                                                                            gatcgtcgACCGTGACGGCGCGGTGACTCAGTTCGTGTCGTTGCATGACCGTGCCTGGCATGCGGGTGTGTCGAGCTTTGACGGGCGCGAAGGCTGTAACGACTTTTCCATCGGCATCGAg                                                                     <  6:320425/119‑1 (MQ=255)                                                                                                            gTTCGTCGAGCGTGACGGCGCGGTGACTCAGTTCGTGTCGTTGCATGACCGTGCCTGGCATGCGGGTGTGTCGAGCTTTGACGGGCGCGAAGGCTGTAACGACTTTTCCATCGGCATCGAGCTGGAAGGCACCGACAACCTGCCCtata                                         >  2:375104/1‑149 (MQ=255)                                                                                                             ttCGTCGAGCGTGACGGCGCGGTGACTCAGTTCGTGTCGTTGCATGACCGTGCCTGGCATGCGGGTGTGTCGAGCTTTGACGGGCGCGAAGGCTGTAACGACTTTTCCATCGGCATCGAGCTGGAAGGCACCGACGACCTGCCCtata                                         <  1:96529/148‑1 (MQ=255)                                                                                                                   gAGCGTGACGGCGCGGTGACTCAGTTCGTGTCGTTGCATGACCGTGCCTGGCATGCGGGTGTGTCGAGCTTTGACGGGCGCGAAGGCTGTAACGACTTTTCCATCGGCATCGAGCTGGAAGGCACCGACGACCTGCCCTATACCGATGc                                  <  1:359704/149‑1 (MQ=255)                                                                                                                         gACGGCGCGGTGACTCAGTTCGTGTCGTTGCATGACCGTGCCTGGCATGCGGGTGTGTCGAGCTTTGACGGGCGCGAAGGCTGTAACGACTTTTCCATCGGCATCGAGCTGGAAGGCACCGACGACCTGCCCTATACCGATGCCCAGTa                            >  2:119275/1‑149 (MQ=255)                                                                                                                          aCGGCGCGGTGACTCAGTTCGTGTCGTTGCATGACCGTGCCTGGCATGCGGGTGTGTCGAGCTTTGACGGGCGCGAAGGCTGTAACGACTTTTCCATCGGCATCGAGCTGGAAGGCACCGACGACCTGCCCTATACCGATGCCCAGTAt                           <  6:167023/149‑1 (MQ=255)                                                                                                                             gcgcGGTGACTCAGTTCGTGTCGTTGCATGACCGTGCCTGGCATGCGGCTGTGTCGAGCTTTGACGGGCGCGAAGGCTGTAACGACTTTTCCATCGGCATCGAGCTGGAAGGCACCGACGACCTGCCCTATACCGATGCCCAGTATGCg                        >  3:133826/1‑149 (MQ=255)                                                                                                                                   tGACTCAGTTCGTGTCGTTGCATGACCGTGCCTGGCATGCGGGTGTGTCGAGCTTTGACGGGCGCGAAGGCTGTAACGACTTTTCCATCGGCATCGAGCTGGAAGGCACCGACGACCTGCCCTATACCGATGCCCAGTATGCGGTGCTg                  <  4:133826/149‑1 (MQ=255)                                                                                                                                      cTCAGTTCGTGTCGTTGCATGACCGTGCCTGGCATGCGGGTGTGTCGAGCTTTGACGGGCGCGAAGGCTGTAACGACTTTTCCATCGGCATCGAGCTGGAAGGCACCGACGACCTGCCCTATACCGATGCCCAGTATGCGGTGCTGGa                <  7:243090/148‑1 (MQ=255)                                                                                                                                      cTCAGTTCGTGTCGTTGCATGACCGTGCCTGGCATGCGGGTGTGTCGAGCTTTGACGGGCGCGAAGGCTGTAACGACTTTTCCATCGGCATCGAGCTGGAAGGCACCGACGACCTGCCCTATACCGATGCCCAGTATGCGGTGCTGGAg               <  1:203921/149‑1 (MQ=255)                                                                                                                                         aGTTCGTGTCGTTGCATGACCGTGCCTGGCATGCGGGTGTGTCGAGCTTTGACGGGCGCGAAGGCTGTAACGACTTTTCCATCGGCATCGAGCTGGAAGGCACCGCCGACCTGCCCTATACCGATGCCCAGTATGCGGTGCTGGAGCaa            >  6:365799/1‑149 (MQ=255)                                                                                                                                          gTTCGTGTCGTTGCATGACCGTGCCTGGCATGCGGGTGTGTCGAGCTTTGACGGGCGCGAAGGCTGTAACGACTTTTCCATCGGCATCGAGCTGGAAGGCACCGACGACCTGCCCTATACCGATGCCCAGTATGCGGTGCTGGAGCAAc           >  4:342113/1‑149 (MQ=255)                                                                                                                                           ttCGTGTCGTTGCATGACCGTGCCTGGCATGCGGGTGTGTCGAGCTTTGACGGGCGCGAAGGCTGTAACGACTTTTCCATCGGCATCGAGCTGGAAGGCACCGACGACCTGCCCTATACCGATGCCCAGTATGCGGTGCTGGAGCAACt          >  2:260261/1‑149 (MQ=255)                                                                                                                                              gtgtCGTTGCATGACCGTGCCTGGCATGCGGGTGTGTCGAGCTTTGACGGGCGCGAAGGCTGTaacgacacgaactgagtcaccgcgccgtcacgctcgccgaacaggtgcgccgacacggtcaggtggttgatgctggcaaaatacgg       <  7:238816‑M2/149‑87 (MQ=255)                                                                                                                                               tgtCGTTGCATGACCGTGCCTGGCATGCGGGTGTGTCGAGCTTTGACGGGCGCGAAGGCTGTaacgacacgaactgagtcaccgcgccgtcacgctcgacgaacaggtgcgccgacacggtcaggtggttgatgctggcaaaatacggg      <  3:290715‑M2/149‑88 (MQ=255)                                                                                                                                                gtCGTTacagccttcgcgcccgtcaaagctcgacacacccgcatgccaggcacggtcatgcaacgacacgaactgagtcaccgcgccgtcacgctcgacgaacaggtgcgccgacacggtcaggtggttgatgctggcaaaatacgggt     <  1:129471‑M1/149‑144 (MQ=255)                                                                                                                                                   gTTacagccttcgcgcccgtcaaagctcgacacacccgcatgccaggcacggtcatgcaacgacacgaactgagtcaccgcgccgtcacgctcgacgaacaggtgcgccgacacggtcaggtggttgatgctggcaaaatacgggtgtt  >  7:183528‑M1/1‑3 (MQ=255)                                                                                                                                                   gTTGCATGACCGTGCCTGGCATGCGGGTGTGTCGAGCTTTGACGGGCGCGAAGGCTGTAACGACTTTTCCATCGGCATCGAGCTGGAAGGCACCGACGACCTGCCCTATACCGATGCCCAGTATGCGGTGCTGGAGCAACTCACCAgg   >  7:75140/1‑148 (MQ=255)                                                                                                                                                     |                                                                                                                                                   GCCTGTTTCGGCACGGGCAAGGTGCAGCAATTCTTCCAGAACCGCCTGGCCCCTGATGAACACCCGTATTTTGCCAGCATCAACCACCTGACCGTGTCGGCGCACCTGTTCGTCGAGCGTGACGGCGCGGTGACTCAGTTCGTGTCGTTGCATGACCGTGCCTGGCATGCGGGTGTGTCGAGCTTTGACGGGCGCGAAGGCTGTAACGACTTTTCCATCGGCATCGAGCTGGAAGGCACCGACGACCTGCCCTATACCGATGCCCAGTATGCGGTGCTGGAGCAACTCACCCGGC  >  NC_002947/906122‑906416

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.