New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 906270	52 (0.860)	3 (0.050)	3/252	NT	5.8%	coding (281/573 nt)	ampD	N‑acetyl‑anhydromuramyl‑L‑alanine‑amidase
	?	NC_002947	= 906325	48 (0.840)					coding (336/573 nt)	ampD	N‑acetyl‑anhydromuramyl‑L‑alanine‑amidase

AACACCCGTATTTTGCCAGCATCAACCACCTGACCGTGTCGGCGCACCTGTTCGTCGAGCGTGACGGCGCGGTGACTCAGTTCGTGTCGTTGCATGACCGTGCCTGGCATGCGGGTGTGTCGAGCTTTGACGGGCGCGAAGGCTGTAACGACTTTTCCATCGGCATCGAGCTGGAAGGCACCGACGACCTGCCCTATACCGATGCCCAGTATGCGGTGCTGGAGCAACTCACCCGGCACATCCGCAGTGCCTGGCCAGCCATCGACCTGAACCGCATTCAGGGCCACAGCGACA  >  NC_002947/906180‑906473                                                                                                                                                  |                                                                                                                                                     aaCACCCGTATTTTGCCAGCATCAACCACCTGACCGTGTCGGCGCACCTGTTCGTCGAGCGTGACGGCGCGGTGACTCAGTTCGTGTCGTTGCATGACCGTGCCTGGCATGCGGGTGTGTCGAGCTTTGACGGGCGCGAAGGCTGTaac                                                                                                                                                   >  7:183528‑M2/1‑146 (MQ=255)    acCCGTATTTTGCCAGCATCAACCACCTGACCGTGTCGGCGCACCTGTTCGTCGAGCGTGACGGCGCGGTGACTCAGTTCGTGTCGTTGCATGACCGTGCCTGGCATGCGGGTGTGTCGAGCTTTGACGGGCGCGAAGGCTGTaacgac                                                                                                                                                <  1:129471‑M2/149‑7 (MQ=255)      ccGTATTTTGCCAGCATCAACCACCTGACCGTGTCGGCGCACCTGTTCGTCGAGCGTGACGGCGCGGTGACTCAGTTCGTGTCGTTGCATGACCGTGCCTGGCATGCGGGTGTGTCGAGCTTTGACGGGCGCGAAGGCTGTAACGACtt                                                                                                                                              >  5:167023/1‑149 (MQ=255)      ccGTATTTTGCCAGCATCAACCACCTGACCGTGTCGGCGCACCTGTTCGTCGAGCGTGACGGCGCGGTGACTCAGTTCGTGTCGTTGCATGACCGTGCCTGGCATGCGGGTGTGTCGAGCTTTGACGGGCGCGAAGGCTGTAACGACtt                                                                                                                                              >  2:203921/1‑149 (MQ=255)       cGTATTTTGCCAGCATCAACCACCTGACCGTGTCGGCGCACCTGTTCGTCGAGCGTGACGGCGCGGTGACTCAGTTCGTGTCGTTGCATGACCGTGCCTGGCATGCGGGTGTGTCGAGCTTTGACGGGCGCGAAGGCTGTAACGACttt                                                                                                                                             <  5:366329/149‑1 (MQ=255)       cGTATTTTGCCAGCATCAACCACCTGACCGTGTCGGCGCACCTGTTCGTCGAGCGTGACGGCGCGGTGACTCAGTTCGTGTCGTTGCATGACCGTGCCTGGCATGCGGGTGTGTCGAGCTTTGACGGGCGCGAAGGCTGTAACGACttt                                                                                                                                             >  3:164116/1‑149 (MQ=255)                 cAGCATCAACCACCTGACCGTGTCGGCGCACCTGTTCGTCGAGCGTGACGGCGCGGTGACTCAGTTCGTGTCGTTGCATGACCGTGCCTGGCATGCGGGTGTGTCGAGCTTTGACGGGCGCGAAGGCTGTAACGACTTTTCCATCGGCa                                                                                                                                   >  3:369093/1‑149 (MQ=255)                            accTGACCGTGTCGGCGCACCTGTTCGTCGAGCGTGACGGCGCGGTGACTCAGTTCGTGTCGTTGCATGACCGTGCCTGGCATGCGGGTGTGTCGAGCTTTGACGGGCGCGAAGGCTGTAACGACTTTTCCATCGGCATCGAGCTGGaa                                                                                                                        <  8:257213/149‑1 (MQ=255)                              cTGACCGTGTCGGCGCACCTGTTCGTCGAGCGTGACGGCGCGGTGACTCAGTTCGTGTCGTTGCATGACCGTGCCTGGCATGCGGGTGTGTCGAGCTTTGACGGGCGCGAAGGCTGTAACGACTTTTCCATCGGCATCGa                                                                                                                               >  2:249255/1‑140 (MQ=255)                              cTGACCGTGTCGGCGCACCTGTTCGTCGAGCGTGACGGCGCGGTGACTCAGTTCGTGTCGTTGCATGACCGTGCCTGGCATGCGGGTGTGTCGAGCTTTGACGGGCGCGAAGGCTGTAACGACTTTTCCATCGGCATCGa                                                                                                                               <  1:249255/140‑1 (MQ=255)                                    gtgtCGGCGCACCTGTTCGTCGAGCGTGACGGCGCGGTGACTCAGTTCGTGTCGTTGCATGACCGTGCCTGGCATGCGGGTGTGTCGAGCTTTGACGGGCGCGAAGGCTGTAACGACTTTTCCATCGGCATCGAGCTGGAAGGCACcga                                                                                                                <  3:309797/149‑1 (MQ=255)                                         ggCGCACCTGTTCGTCGAGCGTGACGGCGCGGTGACTCAGTTCGTGTCGTTGCATGACCGTGCCTGGCATGCGGGTGTGTCGAGCTTTGACGGGCGCGAAGGCTGTAACGACTTTTCCATCGGCATCGAGCTGGAAGGCACCgacgac                                                                                                            <  7:97983/148‑1 (MQ=255)                                          gcgcACCTGTTCGTCGAGCGTGACGTCGCGGTGACTCAGTTCGTCTAGTTCCATGACCTAGCATGGCATGCGGTTGTGTCGAGCTTTGACGGGCGCGAAGGCTGTAACGACTTTTCCATCGGCATCGAGCTGGAAGGCAACGACGACCt                                                                                                          <  2:74391/149‑1 (MQ=255)                                          gcgcACCTGTTCGTCGAGCGTGACGGCGCGGTGACTCAGTTCGTGTCGTTGCATGACCGTGCCTGGCATGCGGGTGTGTCGAGCTTTGACGGGCGCGAAGGCTGTAACGACTTTTCCATCGGCATCGAGCTGGAAGGCACCGACGACCt                                                                                                          <  4:324602/149‑1 (MQ=255)                                              aCCTGTTCGTCGAGCGTGACGGCGCGGTGACTCAGTTCGGGTCGTTGCATGACCGTGCCTGGCATGCGGGTGTGTCGAGATTTGACGGGCGCGAAGGCTGTAACGACTTTTCCATCGGCATCGAGCTTGAAGGCACCGACGACCTGc                                                                                                        <  2:253650/147‑1 (MQ=255)                                               ccTGTTCGTCGAGCGTGACGGCGCGGTGACTCAGTTCGTGTCGTTGCATGACCGTGCCTGGCATGCGGGTGTGTCGAGCTTTGACGGGCGCGAAGGCTGTAACGACTTTTCCATCGGCATCGAGCTGGAAGGCACCGACGACCTGCCCt                                                                                                     <  1:246716/149‑1 (MQ=255)                                                  gatcgtcgACCGTGACGGCGCGGTGACTCAGTTCGTGTCGTTGCATGACCGTGCCTGGCATGCGGGTGTGTCGAGCTTTGACGGGCGCGAAGGCTGTAACGACTTTTCCATCGGCATCGAg                                                                                                                              <  6:320425/119‑1 (MQ=255)                                                  gTTCGTCGAGCGTGACGGCGCGGTGACTCAGTTCGTGTCGTTGCATGACCGTGCCTGGCATGCGGGTGTGTCGAGCTTTGACGGGCGCGAAGGCTGTAACGACTTTTCCATCGGCATCGAGCTGGAAGGCACCGACAACCTGCCCtata                                                                                                  >  2:375104/1‑149 (MQ=255)                                                   ttCGTCGAGCGTGACGGCGCGGTGACTCAGTTCGTGTCGTTGCATGACCGTGCCTGGCATGCGGGTGTGTCGAGCTTTGACGGGCGCGAAGGCTGTAACGACTTTTCCATCGGCATCGAGCTGGAAGGCACCGACGACCTGCCCtata                                                                                                  <  1:96529/148‑1 (MQ=255)                                                         gAGCGTGACGGCGCGGTGACTCAGTTCGTGTCGTTGCATGACCGTGCCTGGCATGCGGGTGTGTCGAGCTTTGACGGGCGCGAAGGCTGTAACGACTTTTCCATCGGCATCGAGCTGGAAGGCACCGACGACCTGCCCTATACCGATGc                                                                                           <  1:359704/149‑1 (MQ=255)                                                               gACGGCGCGGTGACTCAGTTCGTGTCGTTGCATGACCGTGCCTGGCATGCGGGTGTGTCGAGCTTTGACGGGCGCGAAGGCTGTAACGACTTTTCCATCGGCATCGAGCTGGAAGGCACCGACGACCTGCCCTATACCGATGCCCAGTa                                                                                     >  2:119275/1‑149 (MQ=255)                                                                aCGGCGCGGTGACTCAGTTCGTGTCGTTGCATGACCGTGCCTGGCATGCGGGTGTGTCGAGCTTTGACGGGCGCGAAGGCTGTAACGACTTTTCCATCGGCATCGAGCTGGAAGGCACCGACGACCTGCCCTATACCGATGCCCAGTAt                                                                                    <  6:167023/149‑1 (MQ=255)                                                                   gcgcGGTGACTCAGTTCGTGTCGTTGCATGACCGTGCCTGGCATGCGGCTGTGTCGAGCTTTGACGGGCGCGAAGGCTGTAACGACTTTTCCATCGGCATCGAGCTGGAAGGCACCGACGACCTGCCCTATACCGATGCCCAGTATGCg                                                                                 >  3:133826/1‑149 (MQ=255)                                                                         tGACTCAGTTCGTGTCGTTGCATGACCGTGCCTGGCATGCGGGTGTGTCGAGCTTTGACGGGCGCGAAGGCTGTAACGACTTTTCCATCGGCATCGAGCTGGAAGGCACCGACGACCTGCCCTATACCGATGCCCAGTATGCGGTGCTg                                                                           <  4:133826/149‑1 (MQ=255)                                                                            cTCAGTTCGTGTCGTTGCATGACCGTGCCTGGCATGCGGGTGTGTCGAGCTTTGACGGGCGCGAAGGCTGTAACGACTTTTCCATCGGCATCGAGCTGGAAGGCACCGACGACCTGCCCTATACCGATGCCCAGTATGCGGTGCTGGa                                                                         <  7:243090/148‑1 (MQ=255)                                                                            cTCAGTTCGTGTCGTTGCATGACCGTGCCTGGCATGCGGGTGTGTCGAGCTTTGACGGGCGCGAAGGCTGTAACGACTTTTCCATCGGCATCGAGCTGGAAGGCACCGACGACCTGCCCTATACCGATGCCCAGTATGCGGTGCTGGAg                                                                        <  1:203921/149‑1 (MQ=255)                                                                               aGTTCGTGTCGTTGCATGACCGTGCCTGGCATGCGGGTGTGTCGAGCTTTGACGGGCGCGAAGGCTGTAACGACTTTTCCATCGGCATCGAGCTGGAAGGCACCGCCGACCTGCCCTATACCGATGCCCAGTATGCGGTGCTGGAGCaa                                                                     >  6:365799/1‑149 (MQ=255)                                                                                gTTCGTGTCGTTGCATGACCGTGCCTGGCATGCGGGTGTGTCGAGCTTTGACGGGCGCGAAGGCTGTAACGACTTTTCCATCGGCATCGAGCTGGAAGGCACCGACGACCTGCCCTATACCGATGCCCAGTATGCGGTGCTGGAGCAAc                                                                    >  4:342113/1‑149 (MQ=255)                                                                                 ttCGTGTCGTTGCATGACCGTGCCTGGCATGCGGGTGTGTCGAGCTTTGACGGGCGCGAAGGCTGTAACGACTTTTCCATCGGCATCGAGCTGGAAGGCACCGACGACCTGCCCTATACCGATGCCCAGTATGCGGTGCTGGAGCAACt                                                                   >  2:260261/1‑149 (MQ=255)                                                                                    gtgtCGTTGCATGACCGTGCCTGGCATGCGGGTGTGTCGAGCTTTGACGGGCGCGAAGGCTGTaacgacacgaactgagtcaccgcgccgtcacgctcgccgaacaggtgcgccgacacggtcaggtggttgatgctggcaaaatacgg                                                                <  7:238816‑M2/149‑87 (MQ=255)                                                                                     tgtCGTTGCATGACCGTGCCTGGCATGCGGGTGTGTCGAGCTTTGACGGGCGCGAAGGCTGTaacgacacgaactgagtcaccgcgccgtcacgctcgacgaacaggtgcgccgacacggtcaggtggttgatgctggcaaaatacggg                                                               <  3:290715‑M2/149‑88 (MQ=255)                                                                                         gTTGCATGACCGTGCCTGGCATGCGGGTGTGTCGAGCTTTGACGGGCGCGAAGGCTGTAACGACTTTTCCATCGGCATCGAGCTGGAAGGCACCGACGACCTGCCCTATACCGATGCCCAGTATGCGGTGCTGGAGCAACTCACCAgg                                                            >  7:75140/1‑148 (MQ=255)                                                                                            gCATGACCGTGCCTGGCATGCGGGTGTGTCGAGCTTTGACGGGCGCGAAGGCTGTAACGACTTTTCCATCGGCATCGAGCTGGAAGGCCCCGACGACCTGCCCTATACCGATGCCAAGTATGAGGTCCTTGAGCAACTCACACGGcac                                                         >  3:238225/1‑148 (MQ=255)                                                                                               tGACCGTGCCTGGCATGCGGGTGTGTCGAGCTTTGACGGGCGCGAAGGCTGTAACGACTTTTCCATCGGCATCGAGCTGGAAGGCACCGACGACCTGCCCTATACCGATGCCCAGTATGCGGTGCTGGAGCAACTCACCCGGCACATcc                                                     <  4:369093/149‑1 (MQ=255)                                                                                                gACCGTGCCTGGCATGCGGGTGTGTCGAGCTTTGACGGGCGCGAAGGCTGTAACGACTTTTCCATCGGCATCGAGCTGGAAGGCACCGACGACCTGCCCTATACCGATGCCCAGTATGCGGTGCTGGAGCAACTCACCCGGCACATCCg                                                    >  2:348353/1‑149 (MQ=255)                                                                                                  ccGTGCCTGGCATGCGGGTGTGTCGAGCTTTGACGGGCGCGAAGGCTGTAACGACTTTTCCATCGGCATCGAGCTGGAAGGCACCGACGACCTGCCCTATACCGATGCCCAGTATGCGGTGCTGGAGCAACTCACCCGGCACATCCGCa                                                  <  5:140786/149‑1 (MQ=255)                                                                                                     tGCCTGGCATGCGGGTGTGTCGAGCTTTGACGGGCGCGAAGGCTGTAACGACTTTTCCATCGGCATCGAGCTGGAAGGCACCGACGACCTGCCCTATACCGATGCCCAGTATGCGGTGCTGGAGCAACTCACCCGGCACATCCGCAGTg                                               <  3:342113/149‑1 (MQ=255)                                                                                                        cTGGCATGCGGGTGTGTCGAGCTTTGACGGGCGCGAAGGCTGTAACGACTTTTCCATCGGCATCGAGCTGGAAGGCACCGACGACCTGCCCTATACCGATGCCCAGTATGCGGTGCTGGAGCAACTCACCCGGCACATCCGCAGTGCCt                                            >  5:83940/1‑149 (MQ=255)                                                                                                           gCATGCGGGTGTGTCGAGCTTTGACGGGCGCGAAGGCTGTAACGACTTTTCCATCGGCATCGAGCTGGAAGGCACCGACGACCTGCCCTATACCGATGCCCAGTATGCGGTGCTGGAGCCACTCACCCGGCACATCCGCAGTGCCTGgc                                         >  7:183027/1‑149 (MQ=255)                                                                                                           gCATGCGGGTGTGTCGAGCTTTGACGGGCGCGAAGGCTGTAACGACTTTTCCATCGGCATCGAGCTGGAAGGCACCGACGACCTGCCCTATACCGATGCCCAGTATGCGGTGCTGGAGCAACTCACCCGGCACATCCGCAGTGCCTGgc                                         <  1:206728/149‑1 (MQ=255)                                                                                                             aTGCGGGTGTGTCGAGCTTTGACGGGCGCGAAGGCTGTAACGACTTTTCCATCGGCATCGAGCTGGAAGGCACCGACGACCTGCCCTATACCGATGCCCAGTATGCGGTGCTGGAGCAACTCACCCGGCACATCCGCAGTGCCTGgc                                         >  2:30141/1‑147 (MQ=255)                                                                                                               gCGGGTGTGTCGAGCTTTGACGGGCGCGAAGGCTGTaacgacacgaactgagtcaccgcgccgtcacgctcgacgaacaggtgcgccgacacggtcaggtggttgatgctggcaaaatacgggtgttcatcaggggccaggcggttct                                      >  4:290715‑M2/1‑36 (MQ=255)                                                                                                                 gggTGTGTCGAGCTTTGACGGGCGCGAAGGCTGTAACGACTTTTCCATCGGCATCGAGCTGGAAGGCACCGACGACCTGCCCTATACCGATGCCCAGTATGCGGTGCTGGAGCAACTCACCCGGCACATCCGCAGTGCCTGgccagcca                                   >  6:108513/1‑149 (MQ=255)                                                                                                                   gtgtgtCGAGCTTTGACGGGCGCGAAGGCTGTAACGACTTTTCCATCGGCATCGAGCTGGAAGGCACCGACAACCTGCCCTATACCGATGCCCAGTATGCGGTGCTGGAGCAACTCACCCGGCACATCCGCAGTGCCTGGCCAGCCATc                                 <  1:375104/149‑1 (MQ=255)                                                                                                                        tCGAGCTTTGACGGGCGCGAAGGCTGTAACGCCTTTTCCATCGGCATCGAGCTGGAAGGCACCGACGACCTGCCCTATACCGATGCCCAGTATGCGGTGCTGGAGCAACTCACCCGGCACATCCGCAGTGCCTGGCCAGCCATCGACCt                            >  2:287952/1‑149 (MQ=255)                                                                                                                        tCGAGCTTTGACGGGCGCGAAGGCTGTAACGACTTTTCCATCGGCATCGAGCTGGAAGGCACCGACGACCTGCCCTATATCGATGCCCAGTATGCGGTGCTGGAGCAACTCACCCGGCACATCCGCAGTGCCTGGCCAGCCATCGAcc                             <  1:119275/148‑1 (MQ=255)                                                                                                                        tCGAGCTTTGACGGGCGCGAAGGCTGTAACGACTTTTCCATCGGCATCGAGCTGGAAGGCACCGACGACCTGCCCTATACCGATGCCCAGTATGCGGTGCTGGAGCAACTCACCCGGCACATCCGCAGTGCCTGgc                                         <  6:318703/136‑1 (MQ=255)                                                                                                                        tCGAGCTTTGACGGGCGCGAAGGCTGTAACGACTTTTCCATCGGCATCGAGCTGGAAGGCACCGACGACCTGCCCTATACCGATGCCCAGTATGCGGTGCTGGAGCAACTCACCCGGCACATCCGCAGTGCCTGgc                                         >  5:318703/1‑136 (MQ=255)                                                                                                                          gAGCTTTGACGGGCGCGAAGGCTGTAACGACTTTTCCATCGGCATCGAGCTGGAAGGCACCGACGACCTGCCCTATACCGATGCCCAGTATGCGGTGCTGGAGCAACTCACCCGGCACATCCGCa                                                  >  7:108031/1‑125 (MQ=255)                                                                                                                          gAGCTTTGACGGGCGCGAAGGCTGTAACGACTTTTCCATCGGCATCGAGCTGGAAGGCACCGACGACCTGCCCTATACCGATGCCCAGTATGCGGTGCTGGAGCAACTCACCCGGCACATCCGCa                                                  <  8:108031/125‑1 (MQ=255)                                                                                                                           aGCTTTGACGGGCGCGAAGGCTGTAACGACTTTTCCATCGGCATCGAGCTGGAAGGCACCGACGACCTGCCCTATACCGATGCCCAGTATGCGGTGCTGGAGCAACTCACCCGGCACATCCGCAGTGCCTGGCCAGCCATCGACCTGaa                         >  2:295262/1‑149 (MQ=255)                                                                                                                           aGCTTTGACGGGCGCGAAGGCTGTAACGACTTTTCCATCGGCATCGAGCTGGAAGGCACCGACGACCTGCCCTATACCGATGCCCAGTATGCGGTGCTGGAGCAACTCACCCGGCACATCCGCAGTGCCTGGCCAGCCATCGACCTGaa                         <  2:129471/149‑1 (MQ=255)                                                                                                                                  aCGGGCGCGAAGGCTGTAACGACTTTTCCATCGGCATCGAGCTGGAAGGCACCGACGACCTGCCCTATACCGATGCCCAGTATGCGGTGCTGGAGCAACTCACCCGGCACATCCGCAGTGCCTGGCCAGCCATCGACCTGAACCGCAtt                  >  3:171549/1‑149 (MQ=255)                                                                                                                                    gggCGCGAAGGCTGTAACGACTTTTCCATCGGCATCGAGCTGGAAGGCACCGACGACCTGCCCTATACCGATGCCCAGTATGCGGTGCTGGAGCAACTCACCCGGCACATCCGCAGTGCCTGGCCAGCCATCGACCTGAACCGCAtt                  >  8:187043/1‑147 (MQ=255)                                                                                                                                     ggCGCGAAGGCTGTAACGACTTTTCCATCGGCATCGAGCTGGAAGGCACCGACGACCTGCCCTATACCGATGCCCAGTATGCGGTGCTGGAGCAACTCACCCGGca                                                          <  6:33771/106‑1 (MQ=255)                                                                                                                                      gcgcGAAGGCTGTAACGACTTTTCCATCGGCATCGAGCTGGAAGGCACCGACGACCTGCCCTATACCGATGCCCAGTATGCGGTGCTGGAGCAACTCACCCGGCACATCCGCAGTGCCTGGCCAGCCATCGACCTGAACCGCATTCAgg              <  5:108513/149‑1 (MQ=255)                                                                                                                                            aGGCTGAAACGACTTTTCCATCGGCACCGAGCTGCACGGCACCGACGCCCTGCCCTATACCGATGCCCAGTATGCGGTGCTGGAGCAACTCACCCGGCACATCCGCAGTGCCTGGCCAGCCATCGACCTGAACCGCATTCCGGGCcaca        <  4:171549/149‑1 (MQ=255)                                                                                                                                              gCTGTAACGACTTTTCCATCGGCATCGAGCTGGAAGGCACCGACGACCTGCCCTATACCGATGCCCAGTATGCGGTGCTGGAGCAACTCACCCGGCACATCCGCAGTGCCTGGCCAGCCATCGACCTGAACCGCATTCAGGGCCACAGc      <  4:164116/149‑1 (MQ=255)                                                                                                                                                tGTAAGGACTTTTCCATCGGCATCGAGCTGGAAGGCACCGACGACCTGCCCTATACCGATGCCCAGTATGCGGTGCTGGAGCAACTCACCCGGCACATCCGCAGTGCCTGgcc                                        >  1:337450/1‑113 (MQ=255)                                                                                                                                                tGTAACGACTTTTCCATCGGCATCGAGCTGGAAGGCACCGACGACCTGCCCTATACCGATGCCCAGTATGCGGTGCTGGAGCAACTCACCCGGCACATCCGCAGTGCCTGgcc                                        <  2:337450/113‑1 (MQ=255)                                                                                                                                                 gTAACGACTTTTCCATCGGCATCGAGCTGGAAGGCACCGACGACCTGCCCTATACCGATGCCCAGTATGCGGTGCTGGAGCAACTCACCCGGCACATCCGCAGTGCCTGGCCAGCCATCGACCTGAACAGCATTCAGGGCCACAGCGa    >  4:268597/1‑148 (MQ=255)                                                                                                                                                  tAACGACTTTTCCATCGGCATCGAGCTGGAAGGCACCGACGACCTGCCCTATACCGATGCCCAGTATGCGGTGCTGGAGCAACTCACCCGGCACATCCGCAGTGCCTGGCCAGCCATCGACCTGAACCGCATTCAGGGCCACAGCGACa  <  6:83940/149‑1 (MQ=255)                                                                                                                                                  |                                                                                                                                                     AACACCCGTATTTTGCCAGCATCAACCACCTGACCGTGTCGGCGCACCTGTTCGTCGAGCGTGACGGCGCGGTGACTCAGTTCGTGTCGTTGCATGACCGTGCCTGGCATGCGGGTGTGTCGAGCTTTGACGGGCGCGAAGGCTGTAACGACTTTTCCATCGGCATCGAGCTGGAAGGCACCGACGACCTGCCCTATACCGATGCCCAGTATGCGGTGCTGGAGCAACTCACCCGGCACATCCGCAGTGCCTGGCCAGCCATCGACCTGAACCGCATTCAGGGCCACAGCGACA  >  NC_002947/906180‑906473

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.