BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1042220	83 (1.380)	6 (0.110)	4/250	NT	7.1%	coding (30/1311 nt)	colS	integral membrane sensor signal transduction histidine kinase
*	?	NC_002947	= 1042247	79 (1.390)	6 (0.110)	4/250	NT	7.1%	coding (57/1311 nt)	colS	integral membrane sensor signal transduction histidine kinase

Only 100 of 107 total aligned reads displayed.

GCGACAGCCTGCGCAGCCATGTGCATCAGCTGCGCCAGGTGATCGACAAACCGTTTGAGAAACCGTTGCTGCATACCGTCCATGGCGTCGGCTATCGCCTCGCCGAGGGCCGCGATGGAGTTTAAGCAAAGCCTTGCCCAGCGCATC‑ATCATCGCCTTTGCCCTGATGAGCGCGCTGGTGGCCGGGGCCTTCGCATTCGGTATCGTCGGCACGGTGCACCTGGTCGAAGAGCGACTGATTTCCTCGGTACTGGGCGGTGACCTGCAGCGCCTGCTGCGTATGGACAGCGTCA  >  NC_002947/1042077‑1042368

gCGACAGCCTTCGCAGCCATGTGCATCAGGTGCGCCAGGTTATCGACAAACCGTTTGAGAAACCGTTGCTGCATACCGTCCTTGGCGTCGGCTATCGCCTCGCCGAGGGCCGCGATGGAGTTTAAGCAAAGCCTTGCCCAGCGcatc‑a                                                                                                                                                  <  1:284386/148‑1 (MQ=255)

 cGACAGCCTGCGCAGCCATGTGCATCAGCTGCGCCAGGTGATCGACAAACCGTTTGAGAAACCGTTGCTGCATACCGTCCATGGCGTCGGCTATCGCCTCGCCGAGGGCCGCGATGGAGTTTAAGCAAAGCCTTGCCCAGCGcatc‑atc                                                                                                                                                <  1:51118/149‑1 (MQ=255)

 cGACAGCCTGCGCAGCCATGTGCATCAGCTGCGCCAGGTGATCGACAAACCGTTTGAGAAACCGTTGCTGCATACCGTCCATGGCGTCGGCTATCGCCTCGCCGAGGGCCGCGATGGAGTTTAAGCAAAGCCTTGCCCAGCGcatc‑at                                                                                                                                                 >  2:51118/1‑148 (MQ=255)

     aGCCTGCGCAGCCATGTGCATCAGCTGCGCCAGGTGATCGACAAACCGTTTGAGAAACCGTTGCTGCATACCGTCCATGGCGTCGGCTATCGCCTCGCCGAGGGCCGCGATGGAGTTTAAGCAAAGCCTTGCCCAGCGCATC‑ATCATCg                                                                                                                                            >  7:246679/1‑149 (MQ=255)

      gCCTGCGCAGCCATGTGCATCAGCTGCGCCAGGTGATCGACAAACCGTTTGAGAAACCGTTGCTGCATACCGTCCATGGCGTCGGCTATCGCCTCGCCGAGGGCCGCGATGGAGTTTAAGCAAAGCCTTGCCCAGCGCATC‑ATCATCGc                                                                                                                                           <  6:149285/149‑1 (MQ=255)

       ccTGCGCAGCCATGTGCATCAGCTGCGCCAGGTGATCGACAAACCGTTTGAGAAACCGTTGCTGCATACCGTCCATGGCGTCGGCTATCGCCTCGCCGAGGGCCGCGATGGAGTTTAAGCAAAGCCTTGCCCAGCGCATC‑ATCATCGcc                                                                                                                                          >  3:301735/1‑149 (MQ=255)

       ccTGCGCAGCCATGTGCATCAGCTGCGCCAGGTGATCGACAAACCGTTTGAGAAACCGTTGCTGCATACCGTCCATGGCGTCGGCTATCGCCTCGCCGAGGGCCGCGATGGAGTTTAAGCAAAGCCTTGCCCAGCGCATC‑ATCATCGc                                                                                                                                           >  8:311060/1‑148 (MQ=255)

       ccTGCGCAGCCATGTGCATCAGCTGCGCCAGGTGATCGACAAACCGTTTGAGAAACCGTTGCTGCATACCGTCCATGGCGTCGGCTATCGCCTCGCCGAGGGCCGCGATGGAGTTTAAGCAAAGCCTTGCCCAGCGCATC‑ATCATCGc                                                                                                                                           >  8:299513/1‑148 (MQ=255)

           cgcAGCCATGTGCATCAGCTGCGCCAGGTGATCGACAAACCGTTTGAGAAACCGTTGCTGCATACCGTCCATGGCGTCGGCTATCGCCTCGCCGAGGGCCGCGATGGAGTTTAAGCAAAGCCTTGCCCAGCGCATC‑ATCATCGCCTTTg                                                                                                                                      >  4:284582/1‑149 (MQ=255)

                ccATGTGCATCAGCTGCGCCAGGTGATCGACAAACCGTTTGAGAAACCGTTGCTGCATACCGTCCATGGCGTCGGCTATCGCCTCGCCGAGGGCCGCGATGGAGTTTAAGCAAAGCCTTGCCCAGCGCATC‑ATCATCGCCTTTGCCCt                                                                                                                                  >  8:312052/1‑148 (MQ=255)

                  aTGTGCATCAGCTGCGCCAGGTGATCGACAAACCGTTTGAGAAACCGTTGCTGCATACCGTCCATGGCGTCGGCTATCGCCTCGCCGAGGGCCGCGATGGAGTTTAAGCAAAGCCTTGCCCAGCGCATC‑ATCATCGCCTTTGCCCtgat                                                                                                                               <  7:311060/149‑1 (MQ=255)

                  aTGTGCATCAGCTGCGCCAGGTGATCGACAAACCGTTTGAGAAACCGTTGCTGCATACCGTCCATGGCGTCGGCTATCGCCTCGCCGAGGGCCGCGATGGAGTTTAAGCAAAGCCTTGCCCAGCGCATC‑ATCATCGCCTTTGCCCtgat                                                                                                                               <  3:143157/149‑1 (MQ=255)

                  aTGTGCATCAGCTGCGCCAGGTGATCGACAAACCGTTTGAGAAACCGTTGCTGCATACCGTCCATGGCGTCGGCTATCGCCTCGCCGAGGGCCGCGATGGAGTTTAAGCAAAGCCTTGCCCAGCGCATC‑ATCATCGCCTTTGCCCtgat                                                                                                                               <  3:100895/149‑1 (MQ=255)

                    ctgCATCCGCTGCGCCAGGTGATCGACAAACCGTTTGAGAAACCGTGGCTGCATACCGTCCATGGCGTCGGCTATCGCCTCGCCGAGGGCCGCGATGGAGTTTAAGCAAAGCCTTGCCCAGCGCATC‑ATCATCGCCTTTGCCCtgatga                                                                                                                             <  4:301735/148‑1 (MQ=255)

                      gCATCAGCTGCGCCAGGTGATCGACAAACCGTTTGAGAAACCGTTGCTGCATACCGTCCATGGCGTCGGATATCGCCTCGCCGAGGGCCGCGATGGAGTTTAAGCAAAGCCTTGCCCAGCGCATC‑ATCATCGCCTTTGCCCtgatgatc                                                                                                                           >  2:211165/1‑147 (MQ=255)

                            gCTGCGCCAGGTGATCGACAAACCGTTTGAGAAACCGTTGCTGCATACCGTCCATGGCGTCGGCTATCGCCTCGCCGAGGGCCGCGATGGAGTTTAAGCAAAGCCTTGCCCAGCGCATC‑ATCATCGCCTTTGCCCTGATGAGCgcgctg                                                                                                                     <  5:137689‑M2/149‑7 (MQ=255)

                             cTGCGCCAGGTGATCGACAAACCGTTTGAGAAACCGTTGCTGCATACCGTCCATGGCGTCGGCTATCGCCTCGCCGAGGGCCGCGATGGAGTTTAAGCAAAGCCTTGCCCAGCGCgctcatcagggcaaaggcgatgatgatgtgctgg                                                                                                                     <  7:68321‑M1/149‑35 (MQ=255)

                             cTGCGCCAGGTGATCGACAAACCGTTTGAGAAACCGTTGCTGCATACCGTCCATGGCGTCGGCTATCGCCTCGCCGAGGGCCGCGATGGAGTTTAAGCAAAGCCTTGCCCAGCGCgctcatcagggcaaaggcgatgatgatgcgctgg                                                                                                                     <  6:150922‑M1/149‑35 (MQ=255)

                             cTGCGCCAGGTGATCGACAAACCGTTTGAGAAACCGTTGCTGCATACCGTCCATGGCGTCGGCTATCGCCTCGCCGAGGGCCGCGATGGAGTTTAAGCAAAGCCTTGCCCAGCGCgctcatcagggcaaaggcgatgatgatgcgctgg                                                                                                                     <  5:310343‑M1/149‑35 (MQ=255)

                             cTGCGCCAGGTGATCGACAAACCGTTTGAGAAACCGTTGCTGCATACCGTCCATGGCGTCGGCTATCGCCTCGCCGAGGGCCGCGATGGAGTTTAAGCAAAGCCTTGCCCAGCGCATC‑ATCATCGCCTTTGCCCTGATGAGCgcgctgg                                                                                                                    <  5:189376‑M2/149‑8 (MQ=255)

                             cTGCGCCAGGTGATCGACAAACCGTTTGAGAAACCGTTGCTGCATACCGTCCATGGCGTCGGCTATCGCCTCGCCGAGGGCCGCGATGGAGTTTAAGCAAAGCCTTGCCCAGCGCATC‑ATCATCGCCTTTGCCCTGATGAGCgcgctgg                                                                                                                    <  4:90563‑M2/149‑8 (MQ=255)

                                cgcCAGGTGATCGACAAACCGTTTGAGAAACCGTTGCTGCATACCGTCCATGGCGTCGGCTATCGCCTCGCCGAGGGCCGCGATGGAGTTTAAGCAAAGCCTTGCCCAGCGCATC‑ATCATCGCCTTTGCCCTGATGAGCGCGCtggt                                                                                                                   <  6:189376/147‑1 (MQ=255)

                                     ggTGATCGACAAACCGTTTGAGAAACCGTTGCTGCATACCGTCCATGGCGTCGGCTATCGCCTCGCCGAGGGCCGCGATGGAGTTTAAGCAAAGCCTTGCCCAGCGCATC‑ATCATCGCCTTTGCCCTGATGAGCGCGCTGGTGGCCggg                                                                                                            <  6:270503/149‑1 (MQ=255)

                                      gTGATCGACAAACCGTTTGAGAAACCGTTGCTGCATACCGTCCATGGCGTCGGCTATCGCCTCGCCGAGGGCCGCGATGGAGTTTAAGCAAAGCCTTGCCCAGCGCATC‑ATCATCGCCTTTGCCCTGATGAGCGCGCTGGTGGCCgggg                                                                                                           <  3:284582/149‑1 (MQ=255)

                                      gTGATCGACAAACCGTTTGAGAAACCGTTGCTGCATACCGTCCATGGCGTCGGCTATCGCCTCGCCGAGGGCCGCGATGGAGTTTAAGCAAAGCCATGCCCAGCGCATC‑ATCATCGCCTTTGCCCTGATGAGCGCGCTGGTGGCCgggg                                                                                                           >  8:66023/1‑149 (MQ=255)

                                        gATCGACAAACCGTTTGAGAAACCGTTGCTGCATACCGCCCATGGCGTCGGCTATCGCCTCGCCGAGGGCCGCGATGGAGTTTAAGCAAAGCCTTGCCCAGCGCATC‑ATCATCGCCTTTGCCCTGATGAGCgcgct                                                                                                                      >  3:243846‑M2/1‑131 (MQ=255)

                                         aTCGACAAACCGTTTGAGAAACCGTTGCTGCATACCGTCCATGGCGTCGGCTATCGCCTCGCCGAGGGCCGCGATGGAGTTTAAGCAAAGCCTTGCCCAGCGCATC‑ATCATCGCCTTTGCCCTGATGAGCGCGCTGGTGGCCGGGGCCt                                                                                                        <  7:312052/149‑1 (MQ=255)

                                          tCGACAAACCGTTTGAGAAACCGTTGCTGCATACCGTCCATGGCGTCGGCTATCGCCTCGCCGAGGGCCGCGATGGAGTTTAAGCAAAGCCTTG‑CCAGCGCATC‑ATCATCGCCTTTGCCCTGATGAGCGCGCTGGTGGCCGGGGCCTTc                                                                                                      <  4:262629/149‑1 (MQ=255)

                                           cGACAAACCGTTTGAGAAACCGTTGCTGCATACCGTCCATGGCGTCGGCTATCGCCTCGCCGAGGGCCGCGATGGAGTTTAAGCAAAGCCTTGCCCAGCGCATC‑ATCATCGCCTTTGCCCTGATGAGCGCGCTGGTGGCCGGGGCCTTc                                                                                                      >  2:220335/1‑149 (MQ=255)

                                            gACAAACCGTTTGAGAAACCGTTGCTGCATACCGTCCATGGCGTCGGCTATCGCCTCGCCGAGGGCCGCGATGGAGTTTAAGCAAAGCCTTGCCCAGCGCATC‑ATCATCGCCTTTGCCCTGATGAGCGCGCTGGTGGCCGGGGCCTTc                                                                                                      <  4:49045/148‑1 (MQ=255)

                                            gACAAACCGTTTGAGAAACCGTTGCTGCATACCGTCCATGGCGTCGGCTATCGCCTCGCCGAGGGCCGCGATGGAGTTTAAGCAAAGCCTTGCCCAGCGCATC‑ATCATCGCCTTTGCCCTGATGAGCGCGCTGGTGGCCGGGGCCTTc                                                                                                      <  3:90563/148‑1 (MQ=255)

                                             aCAAACCGTTTGAGCAACCGTTGCTGCATACCGTCCATGGCGTCGGGTATCGCCTCGCCGGGGGCCGCGATGGAGTTTAAGCAAAGCCTTGCCCAGCGCATG‑ATCCTCGCCGTTGGCGGGCTGAGCGCGCTGGTGGCCTGGGCCTGCgg                                                                                                    >  6:267216/1‑148 (MQ=255)

                                             aCAAACCGTTTGAGAAACCGTTGCTGCATACCGTCCATGGCGTCGGCTATCGCCTCGCCGAGGGCCGCGATGGAGTTTAAGCAAAGCCTTGCCCAGCGCATC‑ATCATCGCCTTTGCCCTGATGAGCGCGCTGGTGGCCGGGGCCTTCg                                                                                                     >  8:244488/1‑148 (MQ=255)

                                                aaCCGTTTGAGAAACCGTTGCTGCATTCCGTCCATGGCGTCGGCTATCGCCTCGCCGAGGGCCGCGATGGAGTTTAAGCAAAGCCTTGCCCAGCGCATC‑ATCATCGACTTTGCCCTGATGAGCGCGCTGGTGGCCGGGGCCTTCGCAtt                                                                                                 >  1:202393/1‑149 (MQ=255)

                                                 aCCGTTTGAGAAACCGTTGCTGCATACCGTCCATGGCGTCGGCTATCGCCTCGCCGAGGGCCGCGATGGAGTTTAAGCAAAGCCTTGCCCAGCGCATC‑ATCATCGCCTTTGCCCTGATGAGCGCGCTGGTGGCCGGGGCCTTCGCATTc                                                                                                >  2:69857/1‑149 (MQ=255)

                                                     tttGAGAAACCGTTGCTGCATACCGTCCATGGCGTCGGCTATCGCCTCGCCGAGGGCCGCGATGGAGTTTAAGCAAAGCCTTGCCCAGCGCATC‑ATCATCGCCTTTGCCCTGATGAGCGCGCTGGTGGCCGGGGCCTTCGCATTCGGTa                                                                                            <  1:341336/149‑1 (MQ=255)

                                                        gagaAACCGTTGCTGCATACCGTCCATGGCGTCGGCTATCGCCTCGCCGAGGGCCGCGATGGAGTTTAAGCAAAGCCTTGCCCAGCGCATC‑ATCATCGCCTTTGCCCTGATGAGCGCGCTGGTGGCCGGGGCCTTCGCATTCGGTAtcg                                                                                         >  4:362187/1‑149 (MQ=255)

                                                         agaAACCGTTGCTGCATACCGTCCATGGCGTCGGCTATCGCCTCGCCGAGGGCCGCGATGGAGTTTAAGCAAAGCCTTGCCCAGCGCATC‑ATCATCGCCTTTGCCCTGATGAGCGCGCTGGTGGCCGGGGCCTTCGCATTCGGTAtcgt                                                                                        <  1:220335/149‑1 (MQ=255)

                                                         agaAACCGTTGCTGCATACCGTCCATGGCGTCGGCTATCGCCTCGCCGAGGGCCGCGATGGAGTTTAAGCAAAGCCTTGCCCAGCGCATC‑ATCATCGCCTTTGCCCTGATGAGCGCGCTGGTGGCCGGGGCCTTCGCATTCGGTAtcgt                                                                                        >  8:39668/1‑149 (MQ=255)

                                                          gaAACCGTTGCTGCATACCGTCCATGGCGTCGGCTATCGCCTCGCCGAGGGCCGCGATGGAGTTTAAGCAAAGCCTTGCCCAGCGCATC‑ATCATCGCCTTTGCCCTGATGAGCGCGCTGGTGGCCGGGGCCTTCGCATTCg                                                                                               >  6:230731/1‑141 (MQ=255)

                                                          gaAACCGTTGCTGCATACCGTCCATGGCGTCGGCTATCGCCTCGCCGAGGGCCGCGATGGAGTTTAAGCAAAGCCTTGCCCAGCGCATC‑ATCATCGCCTTTGCCCTGATGAGCGCGCTGGTGGCCGGGGCCTTCGCATTCGGTAtcgtc                                                                                       >  5:141234/1‑149 (MQ=255)

                                                             aCCGTTGCTGCATACCGTCCATGGCGTCGGCTATCGCCTCGCCGAGGGCCGCGATGGAGTTTAAGCAAAGCCTTGCCCAGCGCATC‑ATCATCGCCTTTGCCCTGATGAGCGCGCTGGTGGCCGGGGCCTTCGCATTCGGTATCGTCGGc                                                                                    >  4:114472/1‑149 (MQ=255)

                                                               cGTTGCTGCATACCGTCCATGGCGTCGGCTATCGCCTCGCCGAGGGCCGCGATGGAGTTTAAGCAAAGCCTTGCCCAGCGCgctcatcagggcaaaggcgatgatgatgcgctgggcaag                                                                                                                <  1:121905‑M1/120‑40 (MQ=255)

                                                               cGTTGCTGCATACCGTCCATGGCGTCGGCTATCGCCTCGCCGAGGGCCGCGATGGAGTTTAAGCAAAGCCTTGCCCAGCGCgctcatcagggcaaaggcgatgatgatgcgctgggcaag                                                                                                                >  2:121905‑M1/1‑81 (MQ=255)

                                                                gTTGCTGCATACCGTCCATGGCGTCGGCTATCGCCTCGCCGAGGGCCGCGATGGAGTTTAAGCAAAGCCTTGCCCAGCGCATC‑ATCATCGCCTTTGCCCTGATGAGCGCGCTGGTGGCCGGGGCCTTCGCATTCGGTATCGTCGGCACg                                                                                 >  5:7249/1‑149 (MQ=255)

                                                                 ttGCTGCATACCGTCCATGGCGTCGGCTATCGCCTCGCCGAGGGCCGCGATGGAGTTTAAGCAAAGCCTTGCCCAGCGCATC‑ATCATCGCCTTTGCCCTGATGAGCGCGCTGGTGGCCGGGGCCTTCGCATTCGGTATCGTCGGCACgg                                                                                <  7:203735/149‑1 (MQ=255)

                                                                 ttGCTGCATACAGTCCATGGCTTCGGCTATCGCCTCGCCGAGGGCCGCGATGGAGTTTAATCAAAGCCTTTCCCAGCGCATC‑ATCATCTACTTTGCCCTTATGAGCGCGCTTGTGGCCGGCGCCTTCGCATTCGGTATCGTCGTCACgg                                                                                <  1:211165/149‑1 (MQ=255)

                                                                   gctgcATACCGTCCATGGCGTCGGCTATCGCCTCGCCGAGGGCCGCGATGGAGTTTAAGCAAAGCCTTGCCCAGCGCATC‑ATCATCGCCTTTGCCCTGATGAGCGCGCTGGTGGCCGGGGCCTTCGCATTCGGTATCGTCGGCACGGt                                                                               <  7:299513/148‑1 (MQ=255)

                                                                         tACCGTCCATGGCGTCGGCTATCGCCTCGCCGAGGGCCGCGATGGAGTTTAAGCAAAGCCTTGCCCAGCGCATC‑ATCATCGCCTTTGCCCTGATGAGCGCGCTGGTGGCCGGGGCCTTCGCATTCGGTATCGTCGGCACGGTGCACCTg                                                                        >  1:280616/1‑149 (MQ=255)

                                                                          aCCGTCCATGGCGTCGGCTATCGCCTCGCCGAGGGCCGCGATGGAGTTTAAGCAAAGCCTTGCCCAGCGCATC‑ATCATCGCCTTTGCCCTGATGAGCGCGCTGGTGGCCGGGGCCTTCGCATTCGGTATCGTCGGCACGGTGCACCTgg                                                                       >  7:298641/1‑149 (MQ=255)

                                                                            cGTCCATGGCGTCGGCTATCGCCTCGCCGAGGGCCGCGATGGAGTTTAAGCAAAGCCTTGCCCAGCGCATC‑ATCATCGCCTTTGCCCTGATGAGCGCGCTGGTGGCCGGGGCCTTCGCATTCGGTTTCGTCGGCACGGTGCACCTGGTc                                                                     >  5:222669/1‑149 (MQ=255)

                                                                            cGTCCATGGCGTCGGCTATCGCCTCGCCGAGGGCCGCGATGGAGTTTAAGCAAAGCCTTGCCCAGCGCATC‑ATCATCGCCTTTGCCCTGATGAGCGCGCTGGTGGCCGGGGCCTTCGCATTCGGTATCGTCGGCACGGTGCACCTGGTc                                                                     <  2:280616/149‑1 (MQ=255)

                                                                             gTCCATGGCGTCGGCTATCGCCTCGCCGAGGGCCGCGATGGAGTTTAAGCAAAGCCTTGCCCAGCGCATC‑ATCATCGCCTTTGCCCTGATGAGCGCGCTGGTGGCCGGGGCGTTCGCATTCGGTATCGTCGGCCCGGTGCGCCTGGTCg                                                                    >  3:293034/1‑149 (MQ=255)

                                                                                cATGGCGTCGGCTATCGCCTCGCCGAGGGCCGCGATGGAGTTTAAGCAAAGCCTTGCCCAGCGCATC‑ATCATCGCCTTTGCCCTGATGAGCGCGCTGGTGGCCGGGGCCTTCGCATTCGGTATCGTCGGCACGGTGCACCTGGTCGaa                                                                  <  7:244488/148‑1 (MQ=255)

                                                                                   ggCGTCGGCTATCGCCTCGCCGAGGGCCGCGATGGAGTTTAAGCAAAGCCTTGCCCAGCGCATCAAGCATCGCCTTTGCCCTGATGAGCGCGCTGGTGGCCGGGGCCTTCGCATTCGGTAGCGTCGGCACGGTGCACCTGGGCGAagag                                                               >  1:303143/1‑149 (MQ=255)

                                                                                       tCGGCTATCGCCGCGCCGAGGGCCGCGATGGAGTTTAAGCAAAGCCTTGCCCAGCGCATC‑ATCATCGCCTTTGCCCTGATGAGCGCGCTGGTGGCCGGGGCCTTCGCATTCGGTATCGTCGGCACGGTGCACCTGGTCGAAGAGCGACt                                                          <  8:260362/149‑1 (MQ=255)

                                                                                          gCTATCGCCTCGCCGAGGGCCGCGATGGAGTTTAAGCAAAGCCTTGCCCAGCGCATC‑ATCATCGCCTTTGCGCTGATGAGCGCGCTGGTGGCCGGGGCCTTCGCATTCGGTCTCGTCGGCACGGGGCACCTGGGAGAAGAGCGACTGag                                                       >  8:336732/1‑148 (MQ=255)

                                                                                          gCTATCGCCTCGCCGAGGGCCGCGATGGAGTTTAAGCAAAGCCTTGCCCAGCGCATC‑ATCATCGCCTTTGCCCTGATGAGCGCGCTGGTGGCCGGGGCCTTCGCATTCGGTATCGTCGGCACGGTGCACCTGGTCGAAGAGCGACTGAt                                                       >  3:289/1‑149 (MQ=255)

                                                                                           cTATCGCCTCGCCGAGGGCCGCGATGGAGTTTAAGCAAAGCCTTGCCCAGCGCATC‑ATCATCGCCTTTGCCCTGATGAGCGCGCCGGTGGCCGGGGCCTTCGCATTCGGTATCGTCGGCACGGTGCACCTGGTCGAAGAGCGACTGAtt                                                      >  6:76430/1‑149 (MQ=255)

                                                                                            tATCGCCTCGCCGAGGGCCGCGATGGAGTTTAAGCAAAGCCTTGCCCAGCGCATC‑ATCATCGCCTTTGCCCTGATGAGCGCGCTGGTGGCCGGGGCCTTCGCATTCGGTATCGTCGGCACGGTGCACCTGGTCGAAGAGCGACTGAttt                                                     >  2:213679/1‑149 (MQ=255)

                                                                                                 cctcgccGAGGGCCGCGATGGAGTTTAAGCAAAGCCTTGCCCAGCGCATC‑ATCATCGCCTTTGCCCTGATGAGCGCGGTGGTGGCCGGGGCCTTCGCATTCGGTATCGTCGGCACGGTGCACCTGGTCGAAGAGCGACTGATTTCCTCg                                                >  1:121617/1‑149 (MQ=255)

                                                                                                 cctcgccGAGGGCCGCGATGGAGTTTAAGCAAAGCCTTGCCCAGCGCATC‑ATCATCGCCTTTGCCCTGATGAGCGCGCTGGTGGCCGGGGCCTTCGCATTCGGTATCGTCGGCACGGTGCACCTGGTCGAAGAGCGACTGATTTCCTCg                                                <  6:7249/149‑1 (MQ=255)

                                                                                                  ctcgccGAGGGCCGCGATGGAGTTTAAGCAAAGCCTTGCCCAGCGCATC‑ATCATCGCCTTTGCCCTGATGAGCGCGCTGGTGGCCGGGGcc                                                                                                         >  2:66761/1‑91 (MQ=255)

                                                                                                  ctcgccGAGGGCCGCGATGGAGTTTAAGCAAAGCCTTGCCCAGCGCATC‑ATCATCGCCTTTGCCCTGATGAGCGCGCTGGTGGCCGGGGcc                                                                                                         <  1:66761/91‑1 (MQ=255)

                                                                                                           ggCCGCGATGGAGTTTAAGCAAAGCCTTGCCCAGCGCATC‑ATCATCTCCTTTGCCCTGATGAGCGCGCTGGTGGCCGGGGCCTTCGCATTCGGTATCGTCGGCACGGTGCACCTGGTCGAAGAGCGTCTGATTTCCTCGGTACTGGGCg                                      <  8:246679/149‑1 (MQ=255)

                                                                                                           ggCCGCGATGGAGTTTAAGCAAAGCCTTGCCCAGCGCATC‑ATCATCGCCTTTGCCCTGATGAGCGCGCTGGTGGCCGGGGCCTTCGCATTCGGTATCGTCGGCACGGTGCACCTGGTCGAAGAGCGACTGATTTCCTCGGTACTGGGCg                                      >  6:281929/1‑149 (MQ=255)

                                                                                                             ccGCGATGGAGTTTAAGCAAAGCCTTGCCCAGCGCATC‑ATCATCGCCTTTGCCCTGATGAGCGCGCTGGTGGCCGGGGCCTTCGCATTCGGTATCGTCGGCACGGTGCACCTGGTCGAAGAGCGACTGATTTCCTCGGTACTGGGCg                                      >  8:48181/1‑147 (MQ=255)

                                                                                                             ccGCGATGGAGTTTAAGCAAAGCCTTGCCCAGCGCATC‑ATCATCGCCTTTGCCCTGATGAGCGCGCTGGTGGCCGGGGCCTTCGCATTCGGTATCGTCGGCACGGTGCACCTGGTCGAAGAGCGACTGATTTCCTCGGTACTGGGCg                                      <  7:48181/147‑1 (MQ=255)

                                                                                                                     gAGTTTAAGCAAAGCCTTGCCCAGCGCATC‑ATCATCGCCTTTGCCCTGATGAGCGCGCTGGTGGCCGGGGCCTTCGCATTCGGTATCGTCGGCACGGTGCACCTGGTCGAAGAGCGACTGATTTCCTCGGTACTGGGCGGTGACCTGCa                            <  8:298641/149‑1 (MQ=255)

                                                                                                                     gAGTTTAAGCAAAGCCTTGCCCAGCGCATC‑ATCATCGCCTTTGCCCTGATGAGCGCGCTGGTGGCCGGGGCCTTCGCATTCGGTATCGTCGGCACGGTGCACCTGGTCGAAGAGCGACTGATTTCCTCGGTACTGGGCGGTGACCTGCa                            <  7:66023/149‑1 (MQ=255)

                                                                                                                     gAGTTTAAGCAAAGCCTTGCCCAGCGCATC‑ATCATCGCCTTTGCCCTGATGAGCGCGCTGGTGGCCGGGGCCTTCGCATTCGGTATCGTCGGCACGGTGCACCTGGTCGAAGAGCGACTGATTTCCTCGGTACTGGGCGGTGACCTGCa                            <  4:289/149‑1 (MQ=255)

                                                                                                                       gTTTAAGCAAAGCCTTGCCCAGCGCATC‑ATCATCGCCTTTGCCCTGATGAGCGCGCTGGTGGCCGGGGCCTTCGCATTCGGTATCGTCGGCACGGTGCACCTGGTCGAAGAGCGACTGATTTCCTCGGTACTGGGCGGTGACCTGCAgc                          >  3:39331/1‑149 (MQ=255)

                                                                                                                            aGCAAAGCCTTGCCCAGCGCATC‑ATCATCGCCTTTGCCCTGATGAGCGCGCTGGTGGCCGGGGCCTTCGCATTCGGTATCGTCGGCACGGTGCACCTGGTCGAAGAGCGACTGATTTCCTCGGTACTGGGCGGTGACCTGCAGCGCctg                     <  1:69857/149‑1 (MQ=255)

                                                                                                                             gCAAAGCCTTGCCCAGCGCATC‑ATCATCGCCTTTGCCCTGATGAGCGCGCTGGTGGCCGGGGCCTTCGCATTCGGTATCGTCGGCACGGTGCACCTGGTCGAAGAGCGACTGATTTCCTCGGTACTGGGCg                                      >  1:369379/1‑131 (MQ=255)

                                                                                                                             gCAAAGCCTTGCCCAGCGCATC‑ATCATCGCCTTTGCCCTGATGAGCGCGCTGGTGGCCGGGGCCTTCGCATTCGGTATCGTCGGCACGGTGCACCTGGTCGAAGAGCGACTGATTTCCTCGGTACTGGGCg                                      <  2:369379/131‑1 (MQ=255)

                                                                                                                               aaaGCCTTGCCCAGCGCATC‑ATCATCGCCTTTGCCCTGCTGAGCGCGCTGGTGGCCGGGGCCTTCGCATTCGGTATCGTCGGCACGGTGCACCTGGTCGAAGAGCGACTGCTTTCGTCGGTACTGGGCGGGGACCTGCAGCGCctgcgg                  >  8:293455/1‑147 (MQ=255)

                                                                                                                               aaaGCCTTGCCCAGCGCATC‑ATCATCGCCTATGGCCTGATGAGCGCGCTGGTGGCCGGGGCGTTCGCATTCGGTATAGTCGGGACGGTGCACCTGGTCGAAGAGAGACTGATTTCCTCGGAACTGGGCGGTGACATGCAGCGCctgctg                  >  8:196354/1‑149 (MQ=255)

                                                                                                                                aaGCCTTGCCCAGCGCATC‑ATCATCGCCTTTGCCCTGATGAGCGCGCTGGTGGCCGGGGCCTTCGCATTCGGTATCGTCGGCACGGTGCACCTGGTCGAAGAGCGACTGATTTCCTCGGTACTGGGCGGTGACCTGCAGCGCCtgctgc                 >  1:60543/1‑149 (MQ=255)

                                                                                                                                aaGCCTTGCCCAGCGCATC‑ATCATCGCCTTTGCCCTGATGAGCGCGCTGGTGGCCGGGGCCTTCGCATTCGGTATCGTCGGCACGGTGCACCTGGTCGAAGAGCGACTGATTTCCTCGGTACTGGGCGGTGACCTGCAGCGCCtgctgc                 <  3:114472/149‑1 (MQ=255)

                                                                                                                                    cTTGCCCAGCGCATC‑ATCATCGCCTTTGCCCTGATGAGCgcgctgggcaaggctttgcttaaactccatcgcggccctcggcgaggcgatagccgacgccatggacggtatgcagcaacg                                          >  2:121905‑M2/1‑39 (MQ=255)

                                                                                                                                    cTTGCCCAGCGCATC‑ATCATCGCCTTTGCCCTGATGAGCgcgctgggcaaggctttgcttaaactccatcgcggccctcggcgaggcgatagccgacgccatggacggtatgcagcaacg                                          <  1:121905‑M2/120‑82 (MQ=255)

                                                                                                                                    cTTGCCCAGCGCATC‑ATCATCGCCTTTGCCCTGATGAGCGCGCTGGTGGCCGGGGCCTTCGCATTCGGTATCGTCGGCACGGTGCACCTGGTCGAAGAGCGACTGATTTCCTCGGTACTGGGCGGTGACCTGCAGCGCCTGCTGCGTAt             <  6:137689/149‑1 (MQ=255)

                                                                                                                                     ttGCCCAGCGCATC‑ATCATCGCCTTTGCCCTGATGAGCGCGCTGGTGGCCGGGGCCTTCGCATTCGGTATCGTCGGCACGGTGCACCTGGTCGAAGAGCGACTGATTTCCTCGGTACTGGGCGGTGACCTGCAGCGCCTGCTGCGTATg            >  7:24182/1‑149 (MQ=255)

                                                                                                                                       gCCCAGCGCATC‑ATCATCGCCTTTGCCCTGATGAGCGCGCTGGTGGCCGGGGCCTTCGCATTCGGTATCGTCGGCACGGTGCACCTGGTCGAAGAGCGACTGATTTCCTCGGTACTGGGCGGTGACCTGCAGCGCCTGCTGCGTATg            <  7:336732/147‑1 (MQ=255)

                                                                                                                                       gCCCAGCGCATC‑ATCATCGCCTTTGCCCTGATGAGCGCGCTGGTGGCCGGGGCCTTCGCATTCGGTATCGTCGGCACGGTGCACCTGGTCGAAGAGCGACTGATTTCCTCGGTACTGGGCGGTGACCTGCAGCGCCTGCTGCGTATg            <  3:325915/147‑1 (MQ=255)

                                                                                                                                        cccAGCGCATC‑ATCATCGCCTTTGCCCTGATGAGCGCGCTGGTGGCCGGGGCCTTCGCATTCGGTATCGTCGGCACGGTGCACCTGGTCGAAGAGCGACTGATTTCCTCGGTACTGGGCGGTGACCTGCAGCGCCTGCTGCGTATGGa          >  5:76481/1‑148 (MQ=255)

                                                                                                                                        cccAGCGCATC‑ATCATCGCCTTTGCCCTGATGAGCGCGCTGGTGGCCGGGGCCTTCGCATTCGGTATCGTCGGCACGGTGCACCTGGTCGAAGAGCGACTGATTTCCTCGGTACTGGGCGGTGACCTGCAGCGCCTGCTGCGTATGGa          <  3:347876/148‑1 (MQ=255)

                                                                                                                                        cccAGCGCATC‑ATCATCGCCTTTGCCCTGATGAGCGCGCTGGTGGCCGGGGCCTTCGCATTCGGTATCGTCGGCACGGTGCACCTGGTCGAAGAGCGACTGATTTCCTCGGTACTGGGCGGTGACCTGCAGCGCCTGCTGCGTATGGAc         <  3:362187/149‑1 (MQ=255)

                                                                                                                                         ccAGCGCgctcatcagggcaaaggcgatgatgatgcgctgggcaaggctttgcttaaactccatcgcggccctcggcgaggcgatagccgacgccatggacggtatgcagcaacggtttctcaaacggtttgtcgatcacctggcgcag         <  5:189376‑M1/149‑143 (MQ=255)

                                                                                                                                         ccAGCGCgctcatcagggcaaaggcgatgatgatgcgctgggcaaggctttgcttaaactccatcgcggccctcggcgaggcgatagccgacgccatggacggtatgcagcaacggtttctcaaacggtttgtcgatcacctggcgcag         <  4:90563‑M1/149‑143 (MQ=255)

                                                                                                                                         ccAGCGCATC‑ATCATCGCCTTTGCCCTGATGAGCgcgctgggcaaggctttgcttaaactccatcgcggccctcggcgaggcgatagccgacgccatggacggtatgcagcaacggtttctcaaacggtttgtcgatcacctggcgcag        <  5:310343‑M2/149‑116 (MQ=255)

                                                                                                                                         ccAGCGCATC‑ATCATCGCCTTTGCCCTGATGAGCgcgctgggcaaggctttgcttaaactccatcgcggccctcggcgaggcgatagccgacgccatggacggtatgcagcaacggtttctcaaacggtttgtcgatcacctggcgcag        <  6:150922‑M2/149‑116 (MQ=255)

                                                                                                                                         ccAGCGCATC‑ATCATCGCCTTTGCCCTGATGAGCGCGCTGGTGGCCGGGGCCTTCGCATTCGGTATCGTCGGCACGGTGCACCTGGTCGAAGAGCGACTGATTTCCTCGGTACTGGGCGGTGACCTGCAGCGCCTGCTGCGTATGGa          >  4:194215/1‑147 (MQ=255)

                                                                                                                                         ccAGCGCATC‑ATCATCGCCTTTGCCCTGATGAGCGCGCTGGTGGCCGGGGCCTTCGCATTCGGTATCGTCGGCACGGTGCACCTGGTCGAAGAGCGACTGATTTCCTCGGTACTGGGCGGTGACCTGCAGCGCCTGCTGCGTATGGACa        <  8:24182/149‑1 (MQ=255)

                                                                                                                                         ccAGCGCATC‑ATCATCGCCTTTGCCCTGATGAGCGCGCTGGTGGCCGGGGCATTCGCATTCGGTATCGTCGGCACGGTGCACCTGGTAGAAGAGCGACTGCTTTCATCGGTACTGGGCGGTGACCTGCAGCGCCTGCTGCGTATGGa          >  5:335787/1‑147 (MQ=255)

                                                                                                                                          cAGCGCgctcatcagggcaaaggcgatgatgatgcgctgggcaaggctttgcttaaactccatcgcggccctcggcgaggcgatagccgacgccatggacggtatgcagcaacggtttctcaaacggtttgtcgatcacctggcgcagc        <  5:137689‑M1/149‑144 (MQ=255)

                                                                                                                                          cAGCGCATC‑ATCATCGCCTTTGCCCTGATGAGCGCGCTGGTGGCCGGGGCCTTCGCATTCGGTATCGTCGGCACGGTGCACCTGGTCGAAGAGCGACTGATTTCCTCGGTACTGGGCGGTGACCTGCAGCGCCTGCTGCGTATGGACAg       >  2:368853/1‑149 (MQ=255)

                                                                                                                                           aGCGCgctcatcagggcaaaggcgatgatgatgcgctgggcaaggctttgcttaaactccatcgcggccctcggcgaggcgatagccgacgccatgggcggtatgcagcaacggtttctcaaacggtttgtcgatc                    >  3:243846‑M1/1‑5 (MQ=255)

                                                                                                                                           aGCGCgctcatcagggcaaaggcgatgatgatgcgctgggcaaggctttgcttaaactccatcgcggccctcggcgaggcgatagccgacgccatgggcggtatgcagcaacggtttctcaaacggtttgtcgatc                    <  4:243846‑M1/136‑132 (MQ=255)

                                                                                                                                               catc‑atcatCGCCTTTGCCCTGATGAGCGCGCTGGTGGCCGGGGCCTTCGCATTCGGTATCGTCGGCACGGTGCACATGGTCGAAGAGCGACTGATTTCCTCGGTACTGGGCGGTGACCTGCAGCGCCTGCTGCGTATGGACAGCGTCa  >  5:134732/1‑149 (MQ=255)

GCGACAGCCTGCGCAGCCATGTGCATCAGCTGCGCCAGGTGATCGACAAACCGTTTGAGAAACCGTTGCTGCATACCGTCCATGGCGTCGGCTATCGCCTCGCCGAGGGCCGCGATGGAGTTTAAGCAAAGCCTTGCCCAGCGCATC‑ATCATCGCCTTTGCCCTGATGAGCGCGCTGGTGGCCGGGGCCTTCGCATTCGGTATCGTCGGCACGGTGCACCTGGTCGAAGAGCGACTGATTTCCTCGGTACTGGGCGGTGACCTGCAGCGCCTGCTGCGTATGGACAGCGTCA  >  NC_002947/1042077‑1042368

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 14 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.