New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1304757	64 (1.060)	4 (0.070)	4/248	NT	6.1%	coding (640/1257 nt)	livM	branched‑chain amino acid ABC transporter permease
	?	NC_002947	= 1304781	64 (1.130)					coding (616/1257 nt)	livM	branched‑chain amino acid ABC transporter permease

CCTTGTTGATCGAGTTGTATTGCAGCCCGAAGAACTCGTGGAAGGTCTGCATGCCCTCGGCCGCACGGCGTTCGAAGGTCAGGCCGAAGAACTCCGGCTTGGGGATGTTGCTGATGCCGTTGGGGCCGCCGGTCCAGTCGGTGAGGTTACGCAGGAACAGGCGGATGATCTCACCGAAACCGAGGGTCACGATCGCCAGG‑TAGTCACCACGCAGGCGCAGCACCGGGAAGCCGAGCAGGAAGCCGAACGTGGCAGCCATCAGGCCGGCAATCGGCAGGCACACCCAGA  >  NC_002947/1304613‑1304900                                                                                                                                                 |                                                                                                                                                 ccTTGTTGATCGAGTTGTATTGCAGCCCGAAGAACTCGTGGAAGGTCTGCATGCCCTCGGCCGCACGGCGTTCGAAGGTCAGGCCGAAGAACTCCGGCTTGGGGATGTTGCTGATGCCGTTGGGGCCGCCGGTCCAGTCGGTGAGGTTa                                                                                                                                              >  7:81138/1‑149 (MQ=255)  cTTGTTGATCGAGTTGTATTGCAGCCCGAAGAACTCGTGGAAGGTCTGCATGCCCTCGGCCGCACGGCGTTCGAAGGTCAGGCCGAAGAACTCCGGCTTGGGGATGTTGCTGATGCCGTTGGGGCCGCCGGTCCAGTCGGTGAGGTTAc                                                                                                                                             >  5:217130/1‑149 (MQ=255)        gATCGAGTTGTATTGCAGCCCGAAGAACTCGTGGAAGGTCTGCATGCCCTCGGCCGCACGGCGTTCGAAGGTCAGGCCGAAGAACTCCGGCTTGGGGATGTTGCTGATGCCGTTGGGGCCGCCGGTCCAGTCGGTGAGGTTACGCAgg                                                                                                                                        >  5:260072/1‑148 (MQ=255)          tCGAGTTGTATTGCAGCCCGAAGAACTCGTGGAAGGTCTGCATGCCCTCGGCCGCACGGCGTTCGAAGGTCAGGCCGAAGAACTCCGGCTTGGGGATGTTGCTGATGCCGTTGGGGCCGCCGGTCCAGTCGGTGAGGTTACGCAGGAAc                                                                                                                                     <  6:260072/149‑1 (MQ=255)              gTTGTATTGCAGCCCGAAGAACTCGTGGAAGGTCTGCATGCCCTCGGCCGCACGGCGTTCGAAGGTCAGGCCGAAGAACTCCGGCTTGGGGATGTTGCTGATGCCGTTGGGGCCGCCGGTCCAGTCGGTGAGGTTACGCAGGAACAGGc                                                                                                                                 <  6:367876/149‑1 (MQ=255)               ttGTATTGCAGCCCGAAGAACTCGTGGAAGGTCTGCATGCCCTCGGCCGCACGGCGTTCGAAGGTCAGGCCGAAGAACTCCGGCTTGGGGATGTTGCTGATGCCGTTGGGGCCGCCGGTCCAGTCGGTGAGGTTACGCAGGAACAGGCg                                                                                                                                >  2:64629/1‑149 (MQ=255)               ttGTATTGCAGCCCGAAGAACTCGTGGAAGGTCTGCATGCCCTCGGCCGCACGGCGTTCGAAGGTCAGGCCGAAGAACTCCGGCTTGGGGATGTTGCTGATGCCGTTGGGGCCGCCGGTCCAGTCGGTGAGGTTACGCAGGAACAGGCg                                                                                                                                >  8:353622/1‑149 (MQ=255)                  tATTGCAGCCCGAAGAACTCGTGGAAGGTCTGCATGCCCTCGGCCGCACGGCGTTCGAAGGTCAGGCCGAAGAACTCCGGCTTGGGGATGTTGCTGATGCCGTTGGGGCCGCCGGTCCAGTCGGTGAGGTTACGCAGGAACAGGCGga                                                                                                                              <  1:64629/148‑1 (MQ=255)                          gacgaAGAACTCTGGGAAGGTCTGGATGTCCTCTGCCGCACGGCGTTCGAAGGTCAGGCCGAAGAAGTCCGGCTGTGGGATGTTGCTGATGCCGTTGGGGCCGCCGGTCCAGTCGGTGAGGTTACGCAGGAACAGGCGGATGATctcac                                                                                                                     >  3:210056‑M2/3‑144 (MQ=255)                           ccGAAGAACTCGTGGAAGGTCTGCATGCCCTCGGCCGCACGGCGTTCGAAGGTCAGGCCGAAGAACTCCGGCTTGGGGATGTTGCTGATGCCGTTGGGGCCGCCGGTCCAGTCGGTGAGatcatccgcctgttcctgcgtaacctcacc                                                                                                                    >  8:279991‑M1/1‑119 (MQ=255)                            cGAAGAACTCGTGGAAGGTCTGCATGCCCTCGGCCGCACGGCGTTCGAAGGTCAGGCCGAAGAACTCCGGCTTGGGGATGTTGCTGATGCCGTTGGGGCCGCCGGTCCAGTCGGTGAGGTTACGCAGGAACAGGCGGATGATctcacc                                                                                                                    <  7:29157‑M2/148‑7 (MQ=255)                               agaaCTCGTGGAAGGTCTGCATGCCCTCGGCCGCACGGCGTTCGAAGGTCAGGCCGAAGAACTCCGGCTTGGGGATGTTGCTGATGCCGTTGGGGCCGCCGGTCCAGTCGGTGAGatcatccgcctgttcctgcgtaacctcaccgact                                                                                                                <  7:279991‑M1/149‑35 (MQ=255)                                   cTCGTGGAAGGTCTGCATGCCCTCGGCCGCACGGCGTTCGAAGGTCAGGCCGAAGAACTCCTGCTTGGGGATGTTGCTGATGCCGTTGGGGCCGCCGGTCCTGTCGGTGAGGTTACGCAg                                                                                                                                         <  7:59053/120‑1 (MQ=255)                                    tCGTGGAAGGTCTGCATGCCCTCGGCCGCACGGCGTTCGAAGGTCAGGCAGAAGAACTCCGGCTTGGGGATGTTGCTGATGCCGTTGGGGCCGCCGGTCCAGTCGGTGAGGTTACGCAGGAACAGGCGGATGATCTCACCGAAACCGAg                                                                                                           >  6:256265/1‑149 (MQ=255)                                      gTGGAAGGTCTGCATGCCCTCGGCCGCACGGCGTTCGAAGGTCAGGCCGAAGAACTCCGGCTTGGGGATGTTGCTGATGCCGTTGGGGCCGCCGGTCCAGTCGGTGAGGTTACGCAGGAACAGGCGGATGATCTCACCGAAACCGAggg                                                                                                         <  7:316475/149‑1 (MQ=255)                                      gTGGAAGGTCTGCATGCCCTCGGCCGCACGGCGTTCGAAGGTCAGGCCGAAGAACTCCGGCTTGGGGATGTTGCTGATGCCGTTGGGGCCGCCGGTCCAGTCGGTGAGGTTACGCAGGAACAGGCGGATGATCTCACCGAAACCGAggg                                                                                                         >  7:351629/1‑149 (MQ=255)                                      gTGGAAGGTCTGCATGCCCTCGGCCGCACGGCGTTCGAAGGTCAGGCCGAAGAACTCCGGCTTGGGGATGTTGCTGATGCCGTTGGGGCCGCCGGTCCAGTCGGTGAGGTTACGCAGGAACAGGCGGATGATCTCACCGAAACCGAgg                                                                                                          <  8:29157/148‑1 (MQ=255)                                        ggAAGGTCTGCATGCCCTCGGCCGCACGGCGTTCGAAGGTCAGGCCGAAGAACTCCGGCTTGGGGATGTTGCTGATGCCGTTGGGGCCGCCGGTCCAGTCGGTGAGGTTACGCAGGAACAGGCGGATGATCTCACCGAAACCGAGGGt                                                                                                        >  3:240377/1‑148 (MQ=255)                                          aaGGTCTGCATGCCCTCGGCCGCACGGCGTTCGAAGGTCAGGCCGAAGAACTCCGGCTTGGGGATGTTGCTGATGCCGTTGGGGCCGCCGGTCCAGTCGGTGAGGTTACGCAGGAACAGGCGGATGATCTCACCGAAACCGAGGGTCAc                                                                                                     >  2:177122/1‑149 (MQ=255)                                                 gCATGCCCTCGGCCGCACGGCGTTCGAAGGTCAGGCCGAAGAACTCCGGCTTGGGGATGTTGCTGATGCCGTTGGGGCCGCCGGTCCAGTCGGTGAGGTTACGCAGGAACAGGCGGATGATCTCACCGAAACCGAGGGTCACGATCGc                                                                                               >  5:182495/1‑148 (MQ=255)                                                  cATGCCCTCGGCCGCACGGCGTTCGAAGGTCAGGCCGAAGAACTCCGGCTTGGGGATGTTGCTGATGCCGTTGGGGCCGCCGGTCCAGTCGGTGAGGTTACGCAGGAACAGGCGGATGATCTCACCGAAACCGAGGGTCACGATCGc                                                                                               >  1:206960/1‑147 (MQ=255)                                                  cATGCCCTCGGCCGCACGGCGTTCGAAGGTCAGGCCGAAGAACTCCGGCTTGGGGATGTTGCTGATGCCGTTGGGGCCGCCGGTCCAGTCGGTGAGGTTACGCAGGAACAGGCGGATGATCTCACCGAAACCGAGGGTCACGATCGc                                                                                               >  2:221880/1‑147 (MQ=255)                                                  cATGCCCTCGGCCGCACGGCGTTCGAAGGTCAGGCCGAAGAACTCCGGCTTGGGGATGTTGCTGATGCCGTTGGGGCCGCCGGTCCAGTCGGTGAGGTTACGCAGGAACAGGCGGATGATCTCACCGAAACCGAGGGTCACGATCGCCa                                                                                             <  6:217130/149‑1 (MQ=255)                                                   aTGCCCTCGGCCGCACGGCGTTCGAAGGTCAGGCCGAAGAACTCCGGCTTGGGGATGTTGCTGATGCCGTTGGGGCCGCCGGTCCAGTCGGTGAGGTTACGCAGGAACAGGCGGATGATCTCACCGAAACCGAGGGTCACGATCGCCAg                                                                                            >  2:263552/1‑149 (MQ=255)                                                   aTGCCCTCGGCCGCACGGCGTTCGAAGGTCAGGCCGAAGAACTCCGGCTTGGGGATGTTGCTGATGCCGTTGGGGCCGCAGGTCCAGTCGGTGAGGTTACGCAGGAACAGGCGGATGATCTCACCGAAACCGAGGGTCACGATCGCCAg                                                                                            >  2:114535/1‑149 (MQ=255)                                                       ccTCGGCCGCACGGCGTTCGAAGGTCAGGCCGAAGAACTCCGGCTTGGGGATGTTGCTGATGCCGTTGGGGCCGCCGGTCCAGTCGGTGAGGTTACGCAGGAACAGGCGGATGATCTCACCGAAACCGAGGGTCACGATCGCCAGG‑TAg                                                                                       >  5:155768/1‑149 (MQ=255)                                                             ccGCACGGCGTTCGAAGGTCAGGCCGAAGAACTCCGGCTTGGGGATGTTGCTGATGCCGTTGGGGCCGCCGGTCCAGTCGGTGAGGTTACGCAGGAACAGGCGGATGATCTCACCGAAACCGAGGGTCACGATCGCCAGG‑TAGTcacca                                                                                 <  6:354747/149‑1 (MQ=255)                                                                cACGGCGTTCGAAGGTCAGGCCGAAGAACTCCGGCTTGGGGATGTTGCTGATGCCGTTGGGGCCGCCGGTCCAGTCGGTGAgg                                                                                                                                                 >  3:127926/1‑83 (MQ=255)                                                                cACGGCGTTCGAAGGTCAGGCCGAAGAACTCCGGCTTGGGGATGTTGCTGATGCCGTTGGGGCCGCCGGTCCAGTCGGTGAgg                                                                                                                                                 <  4:127926/83‑1 (MQ=255)                                                                cACGGCGTTCGAAGGTCAGGCCGAAGAACTCCGGCTTGGGGATGTTGCTGATGCCGTTGGGGCCGCCGGTCCAGTCGGTGAGGTTACGCAGGAACAGGCGGATGATCTCACCGAAACCGAGGGTCACGATCGCCAGG‑TAGTCACCACg                                                                               >  2:72947/1‑148 (MQ=255)                                                                 aCGGCGTTCGAAGGTCAGGCCGAAGAACTCCGGCTTGGGGATGTTGCTGATGCCGTTGGGGCCGCCGGTCCAGTCGGTGAGatcatccgcctgttcctgcgtaacctcaccga                                                                                                                  <  8:89595‑M1/113‑33 (MQ=255)                                                                 aCGGCGTTCGAAGGTCAGGCCGAAGAACTCCGGCTTGGGGATGTTGCTGATGCCGTTGGGGCCGCCGGTCCAGTCGGTGAGatcatccgcctgttcctgcgtaacctcaccga                                                                                                                  >  7:89595‑M1/1‑81 (MQ=255)                                                                          gAAGGTCAGGCCGAAGAACTCCGGCTTGGGGATGTTGCTGATGCCGTTGGGGCCGCCGGTCCAGTCGGTGAGGTTACGCAGGAACAGGCGGATGATCTCACCGAAACCGAGGGTCACGATCGCCAGG‑TAGTCACCACGCAGGCgcagca                                                                    >  2:269343/1‑149 (MQ=255)                                                                          gAAGGTCAGGCCGAAGAACTCCGGCTTGGGGATGTTGCTGATGCCGTTGGGGCCGCCGGTCCAGTCGGTGAGGTTACGCAGGAACAGGCGGATGATCTCACCGAAACCGAGGGTCACGATCGCCAGG‑TAGTCACCACGCAGGCgcagca                                                                    >  2:143213/1‑149 (MQ=255)                                                                           aaGGTCAGGCCGAAGAACTCCGGCTTGGGGATGTTGCTGATGCCGTTGGGGCCGCCGGGCTAGTCGGTGAGGTTACGCAGGAACAGGCGGATGATc                                                                                                                         <  8:242193‑M2/96‑2 (MQ=255)                                                                              gTCAGGCCGAAGAACTCCGGCTTGGGGATGTTGCTGATACCGTTGGGGCCGCCGGTCCAGTCGGTGAGGTTACGCAGGAACAGGCGGATGATCTCACCGAAACCGAGGGTCACGATCGCCAGG‑TAGTCACCACGCAGGCGCAGCACCgg                                                                >  2:38050/1‑149 (MQ=255)                                                                              gTCAGGCCGAAGAACTCCGGCGTGGGGATGTTGCTGATGCCGTTGGGGCCGCCGGTCCAGTCGGTGAGGTTACGCAGGAACAGGCGGATGATCTCACCGAAACCGAGGGTCACGATCGCCAGG‑TAGTCACCACGCAGGCGCAGCACCgg                                                                <  6:30569/149‑1 (MQ=255)                                                                                  ggCCGAAGAACTCCGGCTTGGGGATGTTGCTGATGCCGTTGGGGCCGCCGGTCCAGTCGGTGAGGTTACGCAGGAACAGGCGGATGATCTCACCGAAACCGAGGGTCACGATCGCCAGG‑TAGTCACCACGCAGGCGCAGCACCGGGAAg                                                            <  7:353622/149‑1 (MQ=255)                                                                                  ggCCGAAGAACTCCGGCTTGGGGATGTTGCTGATGCCGTTGGGGCCGCCGGTCCAGTCGGTGAGGTTACGCAGGAACAGGCGGATGATCTCACCGAAACCGAGGGTCACGATCGCCAGG‑TAGTCACCACGCAGGCGCAGCACCGGGAAg                                                            <  1:177122/149‑1 (MQ=255)                                                                                     cGAAGAACTCCGGCTTGGGGATGTTGCTGATGCCGTTGGGGCCGCCGGTCCAGTCGGTGAGGTTACGCAGGAACAGGCGGATGATCTCACCGAAACCGAGGGTCACGATCGCCAGG‑TAGTCACCACGCAGGCGCAGCACCGGGAAGcc                                                          >  2:275020/1‑148 (MQ=255)                                                                                       aagaaCTCCGGCTTGGGGATGTTGCTGATGCCGTTGGGGCCGCCGGTCCAGTCGGTGAGGTTACGCAGGAACAGGCGGATGATCTCACCGAAACCGAGGGTCACGATCGCCAGG‑TAGTCACCACGCAGGCGCAGCACCGGGAAGCCGAg                                                       >  6:228696/1‑149 (MQ=255)                                                                                          aaCTCCGTCTTGGGGATGTTGCTGATGCCGTTGGGGCCGCCGGTCCAGTCGGTGAGGTTACGCAGTAACAGGCGGATGATCTCACCGAAACCGAGGGGCACGATCGCCAGG‑TAGTCACCACGCAGGCGCAGCACCGGGAAGCCGAGCa                                                     <  5:256265/148‑1 (MQ=255)                                                                                             tCCGGCTTGGGGATGTTGCTGATGCCGTTGGGGCCGCCGGTCCAGTCGGTGAGGTTACGCAGGAACAGGCGGATGATCTCACCGAAACCGAGGGTCACGATCGCCAGG‑TAGTCACCACg                                                                               >  1:59094/1‑119 (MQ=255)                                                                                             tCCGGCTTGGGGATGTTGCTGATGCCGTTGGGGCCGCCGGTCCAGTCGGTGAGGTTACGCAGGAACAGGCGGATGATCTCACCGAAACCGAGGGTCACGATCGCCAGG‑TAGTCACCACg                                                                               <  2:59094/119‑1 (MQ=255)                                                                                             tCCGGCTTGGGGATGTTGCTGATGCCGTTGGGGCCGCCGGTCCAGTCGGTGAGGTTACGCAGGAACAGGCGGATGATCTCACCGAAACCGAGGGTCACGATCGCCAGG‑TAGTCACCACGCAGGCGCAGCACCggg                                                               <  5:142998/135‑1 (MQ=255)                                                                                             tCCGGCTTGGGGATGTTGCTGATGCCGTTGGGGCCGCCGGTCCAGTCGGTGAGGTTACGCAGGAACAGGCGGATGATCTCACCGAAACCGAGGGTCACGATCGCCAGG‑TAGTCACCACGCAGGCGCAGCACCggg                                                               >  6:142998/1‑135 (MQ=255)                                                                                               cGGCTTGGGGATGTTGCTGATGCCGTTGGGGCCGCCGGTCCAGTCGGTGAGGTTACGCAGGAACAGGCGGATGATCTCACCGAAACCGAGGGTCACGATCGCCAGG‑TAGTCACCACGCAGGCGCAGCAc                                                                   <  4:7319/129‑1 (MQ=255)                                                                                               cGGCTTGGGGATGTTGCTGATGCCGTTGGGGCCGCCGGTCCAGTCGGTGAGGTTACGCAGGAACAGGCGGATGATCTCACCGAAACCGAGGGTCACGATCGCCAGG‑TAGTCACCACGCAGGCGCAGCAc                                                                   >  3:2007/1‑129 (MQ=255)                                                                                               cGGCTTGGGGATGTTGCTGATGCCGTTGGGGCCGCCGGTCCAGTCGGTGAGGTTACGCAGGAACAGGCGGATGATCTCACCGAAACCGAGGGTCACGATCGCCAGG‑TAGTCACCACGCAGGCGCAGCAc                                                                   >  3:7319/1‑129 (MQ=255)                                                                                               cGGCTTGGGGATGTTGCTGATGCCGTTGGGGCCGCCGGTCCAGTCGGTGAGGTTACGCAGGAACAGGCGGATGATCTCACCGAAACCGAGGGTCACGATCGCCAGG‑TAGTCACCACGCAGGCGCAGCAc                                                                   <  4:2007/129‑1 (MQ=255)                                                                                               cGGCTTGGGGATGTTGCTGATGCCGTTGGGGCCGCCGGTCCAGTCGGTGAGGTTACGCAGGAACAGGCGGATGATCTCACCGAAACCGAGGGTCACGATCGCCAGG‑TAGTCACCACGCAGGCGCAGCACCGGGAAGCCGAGCAGGAAGc                                               <  8:351629/149‑1 (MQ=255)                                                                                                ggCTTGGGGATGTTGCTGATGCCGTTGGGGCCGCCGGTCCAGTCGGTGAGGTTACGCAGGAACAGGCGGATGATCTCACCGAAACCGAGGGTCACGATCGCCAGGCTAGTCACCACGCAGGCGCAGCACCGGGAAGCCGAGCAGGAAGc                                               <  1:72947/149‑1 (MQ=255)                                                                                                 gCTTGGGGATGTTGCTGATGCCGTTGGGGCCGCCGGTCCAGTCGGTGAGGTTACGCAGGAACAGGCGGATGATCTCACCGAAACCGAGGGTCACGATCGCCAGG‑TAGTCACCACGCAGGCGCAGCACCGGGAAGCCGAGCAGGAAGcc                                              >  3:23388/1‑148 (MQ=255)                                                                                                     ggggATGTTGCTGATGCCGTTGGGGCCGCCGGTCCAGTCGGTGAGGTTACGCAGGAACAGGCGGATGATCTCACCGAAACCGAGGGTCACGATCGCCAGG‑TAGTCACCACGCAGGCGCAGCACCGGGAAGCCGAGCAGGAAGCCGAAc                                          <  1:275020/148‑1 (MQ=255)                                                                                                      gggATGTTGCTGATGCCGTTGGGGCCGCCGGTCCAGTCGGTGAGGTTACGCAGGAACAGGCGGATGATCTCACCGAAACCGAGGGTCACGATCGCCAGG‑TAGTCACCACGCAGGCGCAGCACCGGGAAGCCGAGCAGGAAGCCGAACGt                                        >  3:12491/1‑149 (MQ=255)                                                                                                       ggATGTTTCTGATGCCGTTGGGGCCGCCGGTCCAGTCGGTGAGGTTACGCAGGAACAGGCGGATGATCTCACCGAAACCGAGGGTCACGATCGCCAGG‑TAGTCACCTCGCAGGCGCAGCACCGGGAAGCCGAGCAGGAAGCCGAACGTg                                       <  1:263552/149‑1 (MQ=255)                                                                                                       ggATGTTGCTGATGCCGTTGGGGCCGCCGGTCCAGTCGGTGAGGTTACGCAGGAACAGGCGGATGATCTCACCGAAACCGAGGGTCACGATCGCCAGG‑TAGTCACCACGCAGGCGCAGCACCGGGAAGCCGAGCAGGAAGCCGAACGTg                                       <  2:206960/149‑1 (MQ=255)                                                                                                          tGTTGCTGATGCCGTTGGGGCCGCCGGTCCAGTCGGTGAGGTTACGCAGGAACAGGCGGATGATCTCACCGAAACCGAGGGTCACGATCGCCAGG‑TAGTCACCACGCAGGCGCAGCACCGGGAAGCCGAGCAGGAAGCCGAACGTGGCa                                    <  8:79799/149‑1 (MQ=255)                                                                                                            ttGCTGATGCCGTTGGGGCCTCCGGGCCAGTCGGTGAGGTTTCGCAGGAACAGGCGGATGATCTCACCGAAACCGAGGGTCACGATCGCCAGG‑TAGTCACCACGCAGGCGCAGCACCGGGAAGCCGAGCAGGAAGCCGAACGTGGCAGc                                  <  8:355650/149‑1 (MQ=255)                                                                                                            ttGCTGATGCCGTTGGGGCCGCCGGTCCAGTCGGTGAGGTTACGCAGGAACAGGCGGATGATCTCACCGAAACCGAGGGTCACGATCGCCAGG‑TAGTCACCACGCAGGCGCAGCACCGGGAAGCCGAGCAGGAAGCCGAACGTGGCAg                                   <  1:269343/148‑1 (MQ=255)                                                                                                                tGATGCCGTTGGGGCCGCCGGTCCAGTCGGTGAGGTTACGCAGGAACAGGCGGATGATCTCACCGAAACCGAg                                                                                                           >  8:275104/1‑73 (MQ=255)                                                                                                                   tGCCGTTGGGGCCGCCGGTCCAGTCGGTGAGGTTACGCAGGAACAGGCGGATGATCTCACCGAAACCGAGGGTCACGATCGCCAGG‑TAGTCACCACGCAGGCGCAGCACCGGGAAGCCGAGCAGGAAGCCGAGCGTGGCAGCCATCAgg                           >  5:34631/1‑149 (MQ=255)                                                                                                                     ccGTTGGGGCCGCCGGTCCAGTCGGTGAGGTTACGCAGGAACAGGCGGATGATCTCACCGAAACCGAGGGTCACGATCGCCAGG‑TAGTCACCACGCAGGCGCAGCACCGGGAAGCCGAGCAGGAAGCCGAACGTGGCAGCCATCAGGcc                         >  2:129116/1‑149 (MQ=255)                                                                                                                     ccGTTGGGGCCGCCGGTCCAGTCGGTGAGGTTACGCAGGAACAGGCGGATGATCTCACCGAAACCGAGGGTCACGATCGCCAGG‑TAGTCACCACGCAGGCGCAGCACCGGGAAGCCGAGCAGGAAGCCGAACGTGGCAGCCATCAGGcc                         <  6:155768/149‑1 (MQ=255)                                                                                                                       gTTGGGGCCGCCGGTCCAGTCGGTGAGGTTACGCAGGAACAGGCGGATGATCTCACCGAAACCGAGGGTCACGATCGCCAGG‑TAGTCACCACGCAGGCGCAGCACCGGGAAGCCGAGCAGGAAGCCGAACGTGGCAGCCATCAGGCCgg                       <  1:38050/149‑1 (MQ=255)                                                                                                                       gTTGGGGCCGCCGGTCCAGTCGGTGAGGTTACGCAGGAACAGGCGGATGATCTCACCGAAACCGAGGGTCACGATCGCCAGG‑TAGTCACCACGCAGGCGCAGCACCGGGAAGCCGAGCAGGAAGCCGAACGTGGCAGCCATCAGGCCgg                       >  5:41734/1‑149 (MQ=255)                                                                                                                        ttGGGGCCGCCGGTCCAGTCGGTGAGGTTACGCAGGAACAGGCGGATGATCTCACCGAAACCGAGGGTCACGATCGCCAGG‑TAGTCACCACGCAGGCGCAGCACCGGGAAGCCGAGCAGGAAGCCGAACGTGGCAGCCATCAGGCCgg                       >  3:254624/1‑148 (MQ=255)                                                                                                                             gccgccGGTCCAGTCGGTGAGGTTACGCAGGAACAGGCGGATGATCTCACCGAAACCGAGGGTCACGATCGCCAGG‑TAGTCACCACGCAGGCGCAGCACCGGGAAGCCGAGCAGGAAGCCGAACGTGGCAGCCATCAgg                           <  5:336942/139‑1 (MQ=255)                                                                                                                             gccgccGGTCCAGTCGGTGAGGTTACGCAGGAACAGGCGGATGATCTCACCGAAACCGAGGGTCACGATCGCCAGG‑TAGTCACCACGCAGGCGCAGCACCGGGAAGCCGAGCAGGAAGCCGAACGTGGCAGCCATCAgg                           >  6:336942/1‑139 (MQ=255)                                                                                                                             gccgccGGTCCAGTCGGTGAGGTTACGCAGGAACAGGCGGATGATCTCACCGAAACCGAGGGTCACGATCGCCAGG‑TAGTCACCACGCAGGCGCAGCACCGGGAAGCCGAGCAGGAAGCCGAACGTGGCAGCCATCAGGCCGGCAATCg                 >  5:71363/1‑149 (MQ=255)                                                                                                                              ccgccgGTCCAGTCGGTGAGGTTACGCAGGAACAGGCGGATGATCTCACCGAAACCGAGGGTCACGATCGCCTGG‑TAGTCACCACGCAGGCGCAGCACCGGGAAGCCGAGCAGGAAGCCGAACGTGGCTGCAATCAGGCCGTCATTctg                <  4:23388/149‑3 (MQ=255)                                                                                                                               cgccgGTCCAGTCGGTGAGGTTACGCAGGAACAGGCGGATGATCTCACCGAAACCGAGGGTCACGATCGCCAGG‑TAGTCACCACGCAGGCGCCGCACCGGGAAGCCGAGCAGGAAGCCGAACGTGGCAGCCATCCGGCCGGCAATCggc               >  8:323065/1‑149 (MQ=255)                                                                                                                                        aGTCGGTGAGGTTACGCAGGAACAGGCGGATGATctcaccgactggaccggcggccccaacggcatcagcaacatccccaagccggagttcttcggcctgaccttcgaacgccgtgcggccgagggcatgcagaccttccacgagttct       <  7:279991‑M2/149‑116 (MQ=255)                                                                                                                                        aGTCGGTGAGGTTACGCAGGAACAGGCGGATGATCTCACCGAAACCGAGGGTCACGATCGCCAGG‑TAGTCACCACGCAGGCGCAGCACCGGGAAGCCGAGCAGGAAGCCGAACGTGGCAGCCATCAGGCCGGCAATCGGCAGGCACAcc      >  7:129404/1‑149 (MQ=255)                                                                                                                                        aGTCGGTGAGGTTACGCAGGAACAGGCGGATGATCTCACCGAAACCGAGGGTCACGATCGCCAGG‑TAGTCACCACGCAGGCGCAGCACCGGGAAGCCGAGCAGGAAGCCGAACGTGGCAGCCATCAGGCCGGCAATCGGCAGGCACAcc      <  8:81138/149‑1 (MQ=255)                                                                                                                                          tCGGTGAGGTTACGCAGGAACAGGCGGATGATctcaccgactggaccggcggccccaacggcatcagcaacatccccaagccggagttcttcggcctgaccttcgaacgccgt                                         >  7:89595‑M2/1‑32 (MQ=255)                                                                                                                                          tCGGTGAGGTTACGCAGGAACAGGCGGATGATctcaccgactggaccggcggccccaacggcatcagcaacatccccaagccggagttcttcggcctgaccttcgaacgccgt                                         <  8:89595‑M2/113‑82 (MQ=255)                                                                                                                                          tCGGTGAGGTTACGCAGGAACAGGCGGATGATCTCACCGAAACCGAGGGTCACGATCGCCACG‑TAGTCACCACGCAGGCGCAGCACCGGGAAGCCGAGCAGGAAGCCGAACGTGGCAGCCATCAGGCCGGCAATCGGCAGGCACAcc      >  8:10045/1‑147 (MQ=255)                                                                                                                                            ggTGAGatcatccgcctgttcctgcgtaacctcaccgactggaccggcggccccaacggcatcagcaacatccccaagccggagttcttcggcctgaccttcgaacgccgtgcggccgagggcatgcagaccttccacgagttcttcg    <  7:29157‑M1/148‑143 (MQ=255)                                                                                                                                            ggTGAGGTTACGCAGGAACAGGCGGATGATctcaccgactggaccggcggccccaacggcatcagcaacatccccaagccggagttcttcggcctgaccttcgaacgccgtgcggccgagggcatgcagaccttccacgagttcttcgg   >  8:279991‑M2/1‑30 (MQ=255)                                                                                                                                             gTGAGatcatccgcctgttcctgcgtaacctcaccgactggaccggcggccccaacggcatcagcaacatcccacagccggacttcttcggcctgaccttcgaacgccgtgcggcagaggacatccagaccttcccagagttcttcgtc  >  3:210056‑M1/1‑5 (MQ=255)                                                                                                                                                 gatcatccgcctgttcctgcgtaacctcaccgactagcccggcggccccaacggcatcagcaacatccccaagccggagttcttcggcctgacctt                                                   <  8:242193‑M1/96‑96 (MQ=255)                                                                                                                                                 |                                                                                                                                                 CCTTGTTGATCGAGTTGTATTGCAGCCCGAAGAACTCGTGGAAGGTCTGCATGCCCTCGGCCGCACGGCGTTCGAAGGTCAGGCCGAAGAACTCCGGCTTGGGGATGTTGCTGATGCCGTTGGGGCCGCCGGTCCAGTCGGTGAGGTTACGCAGGAACAGGCGGATGATCTCACCGAAACCGAGGGTCACGATCGCCAGG‑TAGTCACCACGCAGGCGCAGCACCGGGAAGCCGAGCAGGAAGCCGAACGTGGCAGCCATCAGGCCGGCAATCGGCAGGCACACCCAGA  >  NC_002947/1304613‑1304900

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.