New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1304757	64 (1.060)	4 (0.070)	4/248	NT	6.1%	coding (640/1257 nt)	livM	branched‑chain amino acid ABC transporter permease
	?	NC_002947	= 1304781	64 (1.130)					coding (616/1257 nt)	livM	branched‑chain amino acid ABC transporter permease

CCCGAAGAACTCGTGGAAGGTCTGCATGCCCTCGGCCGCACGGCGTTCGAAGGTCAGGCCGAAGAACTCCGGCTTGGGGATGTTGCTGATGCCGTTGGGGCCGCCGGTCCAGTCGGTGAGGTTACGCAGGAACAGGCGGATGATCTCACCGAAACCGAGGGTCACGATCGCCAGG‑TAGTCACCACGCAGGCGCAGCACCGGGAAGCCGAGCAGGAAGCCGAACGTGGCAGCCATCAGGCCGGCAATCGGCAGGCACACCCAGAAGCTCCAGCCCAGGTAATGCGAGAGCA  >  NC_002947/1304638‑1304927                                                                                                                                                |                                                                                                                                                    gacgaAGAACTCTGGGAAGGTCTGGATGTCCTCTGCCGCACGGCGTTCGAAGGTCAGGCCGAAGAAGTCCGGCTGTGGGATGTTGCTGATGCCGTTGGGGCCGCCGGTCCAGTCGGTGAGGTTACGCAGGAACAGGCGGATGATctcac                                                                                                                                                >  3:210056‑M2/3‑144 (MQ=255)   cGAAGAACTCGTGGAAGGTCTGCATGCCCTCGGCCGCACGGCGTTCGAAGGTCAGGCCGAAGAACTCCGGCTTGGGGATGTTGCTGATGCCGTTGGGGCCGCCGGTCCAGTCGGTGAGGTTACGCAGGAACAGGCGGATGATctcacc                                                                                                                                               <  7:29157‑M2/148‑7 (MQ=255)           tCGTGGAAGGTCTGCATGCCCTCGGCCGCACGGCGTTCGAAGGTCAGGCAGAAGAACTCCGGCTTGGGGATGTTGCTGATGCCGTTGGGGCCGCCGGTCCAGTCGGTGAGGTTACGCAGGAACAGGCGGATGATCTCACCGAAACCGAg                                                                                                                                      >  6:256265/1‑149 (MQ=255)             gTGGAAGGTCTGCATGCCCTCGGCCGCACGGCGTTCGAAGGTCAGGCCGAAGAACTCCGGCTTGGGGATGTTGCTGATGCCGTTGGGGCCGCCGGTCCAGTCGGTGAGGTTACGCAGGAACAGGCGGATGATCTCACCGAAACCGAggg                                                                                                                                    <  7:316475/149‑1 (MQ=255)             gTGGAAGGTCTGCATGCCCTCGGCCGCACGGCGTTCGAAGGTCAGGCCGAAGAACTCCGGCTTGGGGATGTTGCTGATGCCGTTGGGGCCGCCGGTCCAGTCGGTGAGGTTACGCAGGAACAGGCGGATGATCTCACCGAAACCGAggg                                                                                                                                    >  7:351629/1‑149 (MQ=255)             gTGGAAGGTCTGCATGCCCTCGGCCGCACGGCGTTCGAAGGTCAGGCCGAAGAACTCCGGCTTGGGGATGTTGCTGATGCCGTTGGGGCCGCCGGTCCAGTCGGTGAGGTTACGCAGGAACAGGCGGATGATCTCACCGAAACCGAgg                                                                                                                                     <  8:29157/148‑1 (MQ=255)               ggAAGGTCTGCATGCCCTCGGCCGCACGGCGTTCGAAGGTCAGGCCGAAGAACTCCGGCTTGGGGATGTTGCTGATGCCGTTGGGGCCGCCGGTCCAGTCGGTGAGGTTACGCAGGAACAGGCGGATGATCTCACCGAAACCGAGGGt                                                                                                                                   >  3:240377/1‑148 (MQ=255)                 aaGGTCTGCATGCCCTCGGCCGCACGGCGTTCGAAGGTCAGGCCGAAGAACTCCGGCTTGGGGATGTTGCTGATGCCGTTGGGGCCGCCGGTCCAGTCGGTGAGGTTACGCAGGAACAGGCGGATGATCTCACCGAAACCGAGGGTCAc                                                                                                                                >  2:177122/1‑149 (MQ=255)                        gCATGCCCTCGGCCGCACGGCGTTCGAAGGTCAGGCCGAAGAACTCCGGCTTGGGGATGTTGCTGATGCCGTTGGGGCCGCCGGTCCAGTCGGTGAGGTTACGCAGGAACAGGCGGATGATCTCACCGAAACCGAGGGTCACGATCGc                                                                                                                          >  5:182495/1‑148 (MQ=255)                         cATGCCCTCGGCCGCACGGCGTTCGAAGGTCAGGCCGAAGAACTCCGGCTTGGGGATGTTGCTGATGCCGTTGGGGCCGCCGGTCCAGTCGGTGAGGTTACGCAGGAACAGGCGGATGATCTCACCGAAACCGAGGGTCACGATCGc                                                                                                                          >  1:206960/1‑147 (MQ=255)                         cATGCCCTCGGCCGCACGGCGTTCGAAGGTCAGGCCGAAGAACTCCGGCTTGGGGATGTTGCTGATGCCGTTGGGGCCGCCGGTCCAGTCGGTGAGGTTACGCAGGAACAGGCGGATGATCTCACCGAAACCGAGGGTCACGATCGc                                                                                                                          >  2:221880/1‑147 (MQ=255)                         cATGCCCTCGGCCGCACGGCGTTCGAAGGTCAGGCCGAAGAACTCCGGCTTGGGGATGTTGCTGATGCCGTTGGGGCCGCCGGTCCAGTCGGTGAGGTTACGCAGGAACAGGCGGATGATCTCACCGAAACCGAGGGTCACGATCGCCa                                                                                                                        <  6:217130/149‑1 (MQ=255)                          aTGCCCTCGGCCGCACGGCGTTCGAAGGTCAGGCCGAAGAACTCCGGCTTGGGGATGTTGCTGATGCCGTTGGGGCCGCCGGTCCAGTCGGTGAGGTTACGCAGGAACAGGCGGATGATCTCACCGAAACCGAGGGTCACGATCGCCAg                                                                                                                       >  2:263552/1‑149 (MQ=255)                          aTGCCCTCGGCCGCACGGCGTTCGAAGGTCAGGCCGAAGAACTCCGGCTTGGGGATGTTGCTGATGCCGTTGGGGCCGCAGGTCCAGTCGGTGAGGTTACGCAGGAACAGGCGGATGATCTCACCGAAACCGAGGGTCACGATCGCCAg                                                                                                                       >  2:114535/1‑149 (MQ=255)                              ccTCGGCCGCACGGCGTTCGAAGGTCAGGCCGAAGAACTCCGGCTTGGGGATGTTGCTGATGCCGTTGGGGCCGCCGGTCCAGTCGGTGAGGTTACGCAGGAACAGGCGGATGATCTCACCGAAACCGAGGGTCACGATCGCCAGG‑TAg                                                                                                                  >  5:155768/1‑149 (MQ=255)                                    ccGCACGGCGTTCGAAGGTCAGGCCGAAGAACTCCGGCTTGGGGATGTTGCTGATGCCGTTGGGGCCGCCGGTCCAGTCGGTGAGGTTACGCAGGAACAGGCGGATGATCTCACCGAAACCGAGGGTCACGATCGCCAGG‑TAGTcacca                                                                                                            <  6:354747/149‑1 (MQ=255)                                       cACGGCGTTCGAAGGTCAGGCCGAAGAACTCCGGCTTGGGGATGTTGCTGATGCCGTTGGGGCCGCCGGTCCAGTCGGTGAGGTTACGCAGGAACAGGCGGATGATCTCACCGAAACCGAGGGTCACGATCGCCAGG‑TAGTCACCACg                                                                                                          >  2:72947/1‑148 (MQ=255)                                                 gAAGGTCAGGCCGAAGAACTCCGGCTTGGGGATGTTGCTGATGCCGTTGGGGCCGCCGGTCCAGTCGGTGAGGTTACGCAGGAACAGGCGGATGATCTCACCGAAACCGAGGGTCACGATCGCCAGG‑TAGTCACCACGCAGGCgcagca                                                                                               >  2:143213/1‑149 (MQ=255)                                                 gAAGGTCAGGCCGAAGAACTCCGGCTTGGGGATGTTGCTGATGCCGTTGGGGCCGCCGGTCCAGTCGGTGAGGTTACGCAGGAACAGGCGGATGATCTCACCGAAACCGAGGGTCACGATCGCCAGG‑TAGTCACCACGCAGGCgcagca                                                                                               >  2:269343/1‑149 (MQ=255)                                                  aaGGTCAGGCCGAAGAACTCCGGCTTGGGGATGTTGCTGATGCCGTTGGGGCCGCCGGGCTAGTCGGTGAGGTTACGCAGGAACAGGCGGATGATc                                                                                                                                                    <  8:242193‑M2/96‑2 (MQ=255)                                                     gTCAGGCCGAAGAACTCCGGCTTGGGGATGTTGCTGATACCGTTGGGGCCGCCGGTCCAGTCGGTGAGGTTACGCAGGAACAGGCGGATGATCTCACCGAAACCGAGGGTCACGATCGCCAGG‑TAGTCACCACGCAGGCGCAGCACCgg                                                                                           >  2:38050/1‑149 (MQ=255)                                                     gTCAGGCCGAAGAACTCCGGCGTGGGGATGTTGCTGATGCCGTTGGGGCCGCCGGTCCAGTCGGTGAGGTTACGCAGGAACAGGCGGATGATCTCACCGAAACCGAGGGTCACGATCGCCAGG‑TAGTCACCACGCAGGCGCAGCACCgg                                                                                           <  6:30569/149‑1 (MQ=255)                                                         ggCCGAAGAACTCCGGCTTGGGGATGTTGCTGATGCCGTTGGGGCCGCCGGTCCAGTCGGTGAGGTTACGCAGGAACAGGCGGATGATCTCACCGAAACCGAGGGTCACGATCGCCAGG‑TAGTCACCACGCAGGCGCAGCACCGGGAAg                                                                                       <  7:353622/149‑1 (MQ=255)                                                         ggCCGAAGAACTCCGGCTTGGGGATGTTGCTGATGCCGTTGGGGCCGCCGGTCCAGTCGGTGAGGTTACGCAGGAACAGGCGGATGATCTCACCGAAACCGAGGGTCACGATCGCCAGG‑TAGTCACCACGCAGGCGCAGCACCGGGAAg                                                                                       <  1:177122/149‑1 (MQ=255)                                                            cGAAGAACTCCGGCTTGGGGATGTTGCTGATGCCGTTGGGGCCGCCGGTCCAGTCGGTGAGGTTACGCAGGAACAGGCGGATGATCTCACCGAAACCGAGGGTCACGATCGCCAGG‑TAGTCACCACGCAGGCGCAGCACCGGGAAGcc                                                                                     >  2:275020/1‑148 (MQ=255)                                                              aagaaCTCCGGCTTGGGGATGTTGCTGATGCCGTTGGGGCCGCCGGTCCAGTCGGTGAGGTTACGCAGGAACAGGCGGATGATCTCACCGAAACCGAGGGTCACGATCGCCAGG‑TAGTCACCACGCAGGCGCAGCACCGGGAAGCCGAg                                                                                  >  6:228696/1‑149 (MQ=255)                                                                 aaCTCCGTCTTGGGGATGTTGCTGATGCCGTTGGGGCCGCCGGTCCAGTCGGTGAGGTTACGCAGTAACAGGCGGATGATCTCACCGAAACCGAGGGGCACGATCGCCAGG‑TAGTCACCACGCAGGCGCAGCACCGGGAAGCCGAGCa                                                                                <  5:256265/148‑1 (MQ=255)                                                                    tCCGGCTTGGGGATGTTGCTGATGCCGTTGGGGCCGCCGGTCCAGTCGGTGAGGTTACGCAGGAACAGGCGGATGATCTCACCGAAACCGAGGGTCACGATCGCCAGG‑TAGTCACCACg                                                                                                          >  1:59094/1‑119 (MQ=255)                                                                    tCCGGCTTGGGGATGTTGCTGATGCCGTTGGGGCCGCCGGTCCAGTCGGTGAGGTTACGCAGGAACAGGCGGATGATCTCACCGAAACCGAGGGTCACGATCGCCAGG‑TAGTCACCACg                                                                                                          <  2:59094/119‑1 (MQ=255)                                                                    tCCGGCTTGGGGATGTTGCTGATGCCGTTGGGGCCGCCGGTCCAGTCGGTGAGGTTACGCAGGAACAGGCGGATGATCTCACCGAAACCGAGGGTCACGATCGCCAGG‑TAGTCACCACGCAGGCGCAGCACCggg                                                                                          <  5:142998/135‑1 (MQ=255)                                                                    tCCGGCTTGGGGATGTTGCTGATGCCGTTGGGGCCGCCGGTCCAGTCGGTGAGGTTACGCAGGAACAGGCGGATGATCTCACCGAAACCGAGGGTCACGATCGCCAGG‑TAGTCACCACGCAGGCGCAGCACCggg                                                                                          >  6:142998/1‑135 (MQ=255)                                                                      cGGCTTGGGGATGTTGCTGATGCCGTTGGGGCCGCCGGTCCAGTCGGTGAGGTTACGCAGGAACAGGCGGATGATCTCACCGAAACCGAGGGTCACGATCGCCAGG‑TAGTCACCACGCAGGCGCAGCAc                                                                                              <  4:2007/129‑1 (MQ=255)                                                                      cGGCTTGGGGATGTTGCTGATGCCGTTGGGGCCGCCGGTCCAGTCGGTGAGGTTACGCAGGAACAGGCGGATGATCTCACCGAAACCGAGGGTCACGATCGCCAGG‑TAGTCACCACGCAGGCGCAGCAc                                                                                              <  4:7319/129‑1 (MQ=255)                                                                      cGGCTTGGGGATGTTGCTGATGCCGTTGGGGCCGCCGGTCCAGTCGGTGAGGTTACGCAGGAACAGGCGGATGATCTCACCGAAACCGAGGGTCACGATCGCCAGG‑TAGTCACCACGCAGGCGCAGCAc                                                                                              >  3:7319/1‑129 (MQ=255)                                                                      cGGCTTGGGGATGTTGCTGATGCCGTTGGGGCCGCCGGTCCAGTCGGTGAGGTTACGCAGGAACAGGCGGATGATCTCACCGAAACCGAGGGTCACGATCGCCAGG‑TAGTCACCACGCAGGCGCAGCAc                                                                                              >  3:2007/1‑129 (MQ=255)                                                                      cGGCTTGGGGATGTTGCTGATGCCGTTGGGGCCGCCGGTCCAGTCGGTGAGGTTACGCAGGAACAGGCGGATGATCTCACCGAAACCGAGGGTCACGATCGCCAGG‑TAGTCACCACGCAGGCGCAGCACCGGGAAGCCGAGCAGGAAGc                                                                          <  8:351629/149‑1 (MQ=255)                                                                       ggCTTGGGGATGTTGCTGATGCCGTTGGGGCCGCCGGTCCAGTCGGTGAGGTTACGCAGGAACAGGCGGATGATCTCACCGAAACCGAGGGTCACGATCGCCAGGCTAGTCACCACGCAGGCGCAGCACCGGGAAGCCGAGCAGGAAGc                                                                          <  1:72947/149‑1 (MQ=255)                                                                        gCTTGGGGATGTTGCTGATGCCGTTGGGGCCGCCGGTCCAGTCGGTGAGGTTACGCAGGAACAGGCGGATGATCTCACCGAAACCGAGGGTCACGATCGCCAGG‑TAGTCACCACGCAGGCGCAGCACCGGGAAGCCGAGCAGGAAGcc                                                                         >  3:23388/1‑148 (MQ=255)                                                                            ggggATGTTGCTGATGCCGTTGGGGCCGCCGGTCCAGTCGGTGAGGTTACGCAGGAACAGGCGGATGATCTCACCGAAACCGAGGGTCACGATCGCCAGG‑TAGTCACCACGCAGGCGCAGCACCGGGAAGCCGAGCAGGAAGCCGAAc                                                                     <  1:275020/148‑1 (MQ=255)                                                                             gggATGTTGCTGATGCCGTTGGGGCCGCCGGTCCAGTCGGTGAGGTTACGCAGGAACAGGCGGATGATCTCACCGAAACCGAGGGTCACGATCGCCAGG‑TAGTCACCACGCAGGCGCAGCACCGGGAAGCCGAGCAGGAAGCCGAACGt                                                                   >  3:12491/1‑149 (MQ=255)                                                                              ggATGTTTCTGATGCCGTTGGGGCCGCCGGTCCAGTCGGTGAGGTTACGCAGGAACAGGCGGATGATCTCACCGAAACCGAGGGTCACGATCGCCAGG‑TAGTCACCTCGCAGGCGCAGCACCGGGAAGCCGAGCAGGAAGCCGAACGTg                                                                  <  1:263552/149‑1 (MQ=255)                                                                              ggATGTTGCTGATGCCGTTGGGGCCGCCGGTCCAGTCGGTGAGGTTACGCAGGAACAGGCGGATGATCTCACCGAAACCGAGGGTCACGATCGCCAGG‑TAGTCACCACGCAGGCGCAGCACCGGGAAGCCGAGCAGGAAGCCGAACGTg                                                                  <  2:206960/149‑1 (MQ=255)                                                                                 tGTTGCTGATGCCGTTGGGGCCGCCGGTCCAGTCGGTGAGGTTACGCAGGAACAGGCGGATGATCTCACCGAAACCGAGGGTCACGATCGCCAGG‑TAGTCACCACGCAGGCGCAGCACCGGGAAGCCGAGCAGGAAGCCGAACGTGGCa                                                               <  8:79799/149‑1 (MQ=255)                                                                                   ttGCTGATGCCGTTGGGGCCTCCGGGCCAGTCGGTGAGGTTTCGCAGGAACAGGCGGATGATCTCACCGAAACCGAGGGTCACGATCGCCAGG‑TAGTCACCACGCAGGCGCAGCACCGGGAAGCCGAGCAGGAAGCCGAACGTGGCAGc                                                             <  8:355650/149‑1 (MQ=255)                                                                                   ttGCTGATGCCGTTGGGGCCGCCGGTCCAGTCGGTGAGGTTACGCAGGAACAGGCGGATGATCTCACCGAAACCGAGGGTCACGATCGCCAGG‑TAGTCACCACGCAGGCGCAGCACCGGGAAGCCGAGCAGGAAGCCGAACGTGGCAg                                                              <  1:269343/148‑1 (MQ=255)                                                                                       tGATGCCGTTGGGGCCGCCGGTCCAGTCGGTGAGGTTACGCAGGAACAGGCGGATGATCTCACCGAAACCGAg                                                                                                                                      >  8:275104/1‑73 (MQ=255)                                                                                          tGCCGTTGGGGCCGCCGGTCCAGTCGGTGAGGTTACGCAGGAACAGGCGGATGATCTCACCGAAACCGAGGGTCACGATCGCCAGG‑TAGTCACCACGCAGGCGCAGCACCGGGAAGCCGAGCAGGAAGCCGAGCGTGGCAGCCATCAgg                                                      >  5:34631/1‑149 (MQ=255)                                                                                            ccGTTGGGGCCGCCGGTCCAGTCGGTGAGGTTACGCAGGAACAGGCGGATGATCTCACCGAAACCGAGGGTCACGATCGCCAGG‑TAGTCACCACGCAGGCGCAGCACCGGGAAGCCGAGCAGGAAGCCGAACGTGGCAGCCATCAGGcc                                                    >  2:129116/1‑149 (MQ=255)                                                                                            ccGTTGGGGCCGCCGGTCCAGTCGGTGAGGTTACGCAGGAACAGGCGGATGATCTCACCGAAACCGAGGGTCACGATCGCCAGG‑TAGTCACCACGCAGGCGCAGCACCGGGAAGCCGAGCAGGAAGCCGAACGTGGCAGCCATCAGGcc                                                    <  6:155768/149‑1 (MQ=255)                                                                                              gTTGGGGCCGCCGGTCCAGTCGGTGAGGTTACGCAGGAACAGGCGGATGATCTCACCGAAACCGAGGGTCACGATCGCCAGG‑TAGTCACCACGCAGGCGCAGCACCGGGAAGCCGAGCAGGAAGCCGAACGTGGCAGCCATCAGGCCgg                                                  >  5:41734/1‑149 (MQ=255)                                                                                              gTTGGGGCCGCCGGTCCAGTCGGTGAGGTTACGCAGGAACAGGCGGATGATCTCACCGAAACCGAGGGTCACGATCGCCAGG‑TAGTCACCACGCAGGCGCAGCACCGGGAAGCCGAGCAGGAAGCCGAACGTGGCAGCCATCAGGCCgg                                                  <  1:38050/149‑1 (MQ=255)                                                                                               ttGGGGCCGCCGGTCCAGTCGGTGAGGTTACGCAGGAACAGGCGGATGATCTCACCGAAACCGAGGGTCACGATCGCCAGG‑TAGTCACCACGCAGGCGCAGCACCGGGAAGCCGAGCAGGAAGCCGAACGTGGCAGCCATCAGGCCgg                                                  >  3:254624/1‑148 (MQ=255)                                                                                                    gccgccGGTCCAGTCGGTGAGGTTACGCAGGAACAGGCGGATGATCTCACCGAAACCGAGGGTCACGATCGCCAGG‑TAGTCACCACGCAGGCGCAGCACCGGGAAGCCGAGCAGGAAGCCGAACGTGGCAGCCATCAgg                                                      >  6:336942/1‑139 (MQ=255)                                                                                                    gccgccGGTCCAGTCGGTGAGGTTACGCAGGAACAGGCGGATGATCTCACCGAAACCGAGGGTCACGATCGCCAGG‑TAGTCACCACGCAGGCGCAGCACCGGGAAGCCGAGCAGGAAGCCGAACGTGGCAGCCATCAgg                                                      <  5:336942/139‑1 (MQ=255)                                                                                                    gccgccGGTCCAGTCGGTGAGGTTACGCAGGAACAGGCGGATGATCTCACCGAAACCGAGGGTCACGATCGCCAGG‑TAGTCACCACGCAGGCGCAGCACCGGGAAGCCGAGCAGGAAGCCGAACGTGGCAGCCATCAGGCCGGCAATCg                                            >  5:71363/1‑149 (MQ=255)                                                                                                     ccgccgGTCCAGTCGGTGAGGTTACGCAGGAACAGGCGGATGATCTCACCGAAACCGAGGGTCACGATCGCCTGG‑TAGTCACCACGCAGGCGCAGCACCGGGAAGCCGAGCAGGAAGCCGAACGTGGCTGCAATCAGGCCGTCATTctg                                           <  4:23388/149‑3 (MQ=255)                                                                                                      cgccgGTCCAGTCGGTGAGGTTACGCAGGAACAGGCGGATGATCTCACCGAAACCGAGGGTCACGATCGCCAGG‑TAGTCACCACGCAGGCGCCGCACCGGGAAGCCGAGCAGGAAGCCGAACGTGGCAGCCATCCGGCCGGCAATCggc                                          >  8:323065/1‑149 (MQ=255)                                                                                                               aGTCGGTGAGGTTACGCAGGAACAGGCGGATGATctcaccgactggaccggcggccccaacggcatcagcaacatccccaagccggagttcttcggcctgaccttcgaacgccgtgcggccgagggcatgcagaccttccacgagttct                                  <  7:279991‑M2/149‑116 (MQ=255)                                                                                                               aGTCGGTGAGGTTACGCAGGAACAGGCGGATGATCTCACCGAAACCGAGGGTCACGATCGCCAGG‑TAGTCACCACGCAGGCGCAGCACCGGGAAGCCGAGCAGGAAGCCGAACGTGGCAGCCATCAGGCCGGCAATCGGCAGGCACAcc                                 >  7:129404/1‑149 (MQ=255)                                                                                                               aGTCGGTGAGGTTACGCAGGAACAGGCGGATGATCTCACCGAAACCGAGGGTCACGATCGCCAGG‑TAGTCACCACGCAGGCGCAGCACCGGGAAGCCGAGCAGGAAGCCGAACGTGGCAGCCATCAGGCCGGCAATCGGCAGGCACAcc                                 <  8:81138/149‑1 (MQ=255)                                                                                                                 tCGGTGAGGTTACGCAGGAACAGGCGGATGATctcaccgactggaccggcggccccaacggcatcagcaacatccccaagccggagttcttcggcctgaccttcgaacgccgt                                                                    <  8:89595‑M2/113‑82 (MQ=255)                                                                                                                 tCGGTGAGGTTACGCAGGAACAGGCGGATGATctcaccgactggaccggcggccccaacggcatcagcaacatccccaagccggagttcttcggcctgaccttcgaacgccgt                                                                    >  7:89595‑M2/1‑32 (MQ=255)                                                                                                                 tCGGTGAGGTTACGCAGGAACAGGCGGATGATCTCACCGAAACCGAGGGTCACGATCGCCACG‑TAGTCACCACGCAGGCGCAGCACCGGGAAGCCGAGCAGGAAGCCGAACGTGGCAGCCATCAGGCCGGCAATCGGCAGGCACAcc                                 >  8:10045/1‑147 (MQ=255)                                                                                                                   ggTGAGGTTACGCAGGAACAGGCGGATGATctcaccgactggaccggcggccccaacggcatcagcaacatccccaagccggagttcttcggcctgaccttcgaacgccgtgcggccgagggcatgcagaccttccacgagttcttcgg                              >  8:279991‑M2/1‑30 (MQ=255)                                                                                                                            aCGCAGGAACAGGCGGATGATCTCACCGAAACCGAGGGTCACGATCGCCAGG‑TAGTCACCACGCAGGCGCAGCACCGGGAAGCCGAGCAGGAAGCCGAACGTGGCAGCCATCAGGCCGTCAATCGGCAGGCACACCCAGAAGCTCCAg                     <  1:221880/148‑1 (MQ=255)                                                                                                                              gCAGGAACAGGCGGATGATCTCACCGAAACCGAGGGTCACGATCGCCAGG‑TAGTCACCACGCAGGCGCAGCACCGGGAAGCCGAGCAGGAAGCCGAACGTGGCCGCCATCAGGCCGTCAATCGGCAGGACCACACAGAAGCTCCAGca                   >  6:259855/1‑147 (MQ=38)                                                                                                                               cAGGAACAGGCGGATGATCTCACCGAAACCGAGGGTCACGATCGCCAGG‑TAGTCACCACGCAGGCGCAGCACCGGGAAGCCGAGCAGGAAGCCGAACGTGGCAGCCATCAGGCCGGCAATCGGCAGGCACACCCAGAAGCTCCAGCCCa                 <  2:10477/149‑1 (MQ=255)                                                                                                                                aGGAACAGGCGGATGATCTCACCGAAACCGAGGGTCACGATCGCCAGG‑TAGTCACCACGCAGGCGCAGCACCGGGAAGCCGAGCAGGAAGCCGAACGTGGCAGCCATCAGGCCGGCAATCGGCAGGCACACCCAGAAGCTCCAGCCCAg                >  6:286126/1‑149 (MQ=255)                                                                                                                                       ggCGGATGATCTCACCGAAACCGAGGGTCACGATCGCCAGG‑TAGTCACCACGCAGGCGCAGCACCGGGAAGCCGAGCAGGATGCCGAACGTGGCAGCCATCAGGCCGGCAATCGGCAGGCACACCCAGAAGCTCCAGCCCAGGTAATGc         <  1:114535/149‑1 (MQ=255)                                                                                                                                       ggCGGATGATCTCACCGAAACCGAGGGTCACGATCGCCAGG‑TAGTCACCACGCAGGCGCAGCACCGGGAAGCCGAGCAGGAAGCCGAACGTGGCAGCCATCAGGCCGGCAATCGGCAGGCACACCCAGAAGCTCCAGCCCAGGTAATGc         <  5:286126/149‑1 (MQ=255)                                                                                                                                         cGGATGATCTCACCGAAACCGAGGGTCACGATCGCCAGG‑TAGTCACCACGCAGGCGCAGCACCGGGAAGCCGAGCAGGAAGCCGAACGTGGCAGCCATCAGGCCGGCAATCGGCAGGCACACCCAGAAGCTCCAGCCCAGGTAATGCga       <  4:12491/149‑1 (MQ=255)                                                                                                                                              gatCTCACCGAAACCGAGGGTCACGATCGCCAGG‑TAGTCACCACGCAGGCGCAGCACCGGGAAGCCGAGCAGGAAGCCGAACGTGGCAGCCATCAGGCCGGCAATCGGCAGGCACACCCAGAAGCTCCAGCCCAGGTAATGCGAGAGCa  >  3:119557/1‑149 (MQ=255)                                                                                                                                                |                                                                                                                                                    CCCGAAGAACTCGTGGAAGGTCTGCATGCCCTCGGCCGCACGGCGTTCGAAGGTCAGGCCGAAGAACTCCGGCTTGGGGATGTTGCTGATGCCGTTGGGGCCGCCGGTCCAGTCGGTGAGGTTACGCAGGAACAGGCGGATGATCTCACCGAAACCGAGGGTCACGATCGCCAGG‑TAGTCACCACGCAGGCGCAGCACCGGGAAGCCGAGCAGGAAGCCGAACGTGGCAGCCATCAGGCCGGCAATCGGCAGGCACACCCAGAAGCTCCAGCCCAGGTAATGCGAGAGCA  >  NC_002947/1304638‑1304927

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.