New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5337085 =	71 (1.180)	6 (0.110)	6/250	NT	8.3%	coding (535/1443 nt)	PP_4696	nitrogen regulation protein NR(I)
	?	NC_002947	5337130 =	66 (1.160)					coding (580/1443 nt)	PP_4696	nitrogen regulation protein NR(I)

CGCCAGCAATGGCAAGGCTACAGCGTCCGACAAAGGCAGCGCGGCAACGGCCAATGGCGAGATCGGCATCATCGGCTCGTGCCAGCCCATGCAGGACATGTACAGCAAGATCCGCAAGGTCGCGCCTACCGACTCCAATGTGCTGATCCAGGGCGAGTCGGGCACCGGTAAAGAGCTGGTGGCCCGCGCCCTGCACAACCTGTCTCGCCGGGCCAAGGCACCGATGATCTCGGTGAACTGCGCGGCCATCCCCGAAACGCTGATCGAATCCGAACTGTTCGGCCACGAAAAAGGCG  >  NC_002947/5336937‑5337232                                                                                                                                                     |                                                                                                                                                    cgcCAGCAATGGCAAGGCTACAGCGTCCGACAAAGGCAGCGCGGCAACGGCCAATGGCGAGATCGGCATCATCGGCTCGTGCCAGCCCATGCAGGACATGTACAGCAAGATCCGCAAGGTCGCGCCTACCGACTCCAATGTGCTGATcc                                                                                                                                                     <  3:176300/149‑1 (MQ=255)    cctccaccaagccggcgcgcccggcgctggcgccggtgaacgcgcctttttcgtggccgaacagttcggattcgatcagcgtttcggggatggccgcgcagttcaccgtgatcatcggtgccttggcccggcgagacaggttgtgCAgg                                                                                                                                                  >  8:254512‑M1/146‑149 (MQ=255)    cAGCAATGGCAAGGCTACAGCGTCCGACAAAGGCAGCGCGGCAACGGCCAATGGCGAGATCGGCATCATCGGCTCGTGCCAGCCCATGCAGGACATGTACAGCAAGATCCGCAAGGTCGCGCCTACCGACTCCAATGTGCTGATCCAgg                                                                                                                                                  <  4:235980/149‑1 (MQ=255)     ctccaccaagccggcgcgcccggcgctggcgccggtgaacgcgcctttttcgtggccgaacagttcggattcgatcagcgtttcggggatggccgcgcagttcaccgagatcatcggtgccttggcccggcgagacaggttgtgCAggg                                                                                                                                                 >  7:305351‑M1/145‑149 (MQ=255)     ctccaccaagccggcgcgcccggcgctggcgccggtgaacgcgcctttttcgtggccgaacagttcggattcgatcagcgtttcggggatggccgcgcagttcaccgagatcatcggtgccttggcccggcgagacaggttgtgCAggg                                                                                                                                                 >  5:168566‑M1/145‑149 (MQ=255)      tccaccaagccggcgcgcccggcgctggcgccggtgaacgcgcctttttcgtggccgaacagttcggattcgatcagcgtttcggggatggccgcgcagttcaccgagatcatcggtgccttggcccggcgagacaggttgtgCAGGGc                                                                                                                                                <  4:187657‑M1/6‑1 (MQ=255)       ccaccaagccggcgcgcccggcgctggcgccggtgaacgcgcctttttcgtggccgaacagttcggattcgatcagcgtttcggggatggccgcgcagttcaccgagatcatcggtgccttggcccggcgagacaggttgtgCAGGGCg                                                                                                                                               <  5:204909‑M1/7‑1 (MQ=255)            gCAAGGCTACAGCGTCCGACAAAGGCAGCGCGTCAACGGCCAATGGCGAGATCGGCATCATCGGCTCGTGCCAGCCCATGCAGGACATGTACAGCAAGATCCGCAAGGTCGCGCCTACCGACTCCAATGTGCTGATCCAGGGCGAGTCg                                                                                                                                          <  5:325423/149‑1 (MQ=255)            gCAAGGCTACAGCGTCCGACAAAGGCAGCGCGGCAACGGCCAATGGCGAGATCGGCATCATCGGCTCGTGCCAGCCCATGCAGGACATGTACAGCAAGATCCGCAAGGTCGCGCCTACCGACTCCAATGTGCTGATCCAGGGCGAGTc                                                                                                                                           <  1:335021/148‑1 (MQ=255)             cAAGGCTACAGCGTCCGACAAAGGCAGCGCGGCAACGGCCAATGGCGAGATCGGCATCATCGGCTCGTGCCAGCCCATGCAGGACATGTACAGCAAGATCCGCAAGGTCGCGCCTACCGACTCCAATGTGCTGATCCAGGGCGAGTCgg                                                                                                                                         >  3:336439/1‑149 (MQ=255)             cAAGGCTACAGCGTCCGACAAAGGCAGCGCGGCAACGGCCAATGGCGAGATCGGCATCATCGGCTCGTGCCAGCCCATGCAGGACATGTACAGCAAGATCCGCAAGGTCGCGCCTACCGACTCCAATGTGCTGATCCAGGGCGAGTCgg                                                                                                                                         >  3:291686/1‑149 (MQ=255)              aaGGCTACAGCGTCCGACAAAGGCAGCGCGGCAACGGCCAATGGCGAGATCGGCATCATCGGCTCGTGCCAGCCCATGCAGGACATGTACAGCAAGATCCGCAAGGTCGCGCCTACCGACTCCAATGTGCTGATCCAGGGCgcgggcca                                                                                                                                        >  7:215692/1‑142 (MQ=255)               ccggcgcgcccggcgctggcgccggtgaacgcgcctttttcgtgaccgaacagttcggattcgatcagcgtttcggggatggccgcgcagttcaccgagatcatcggtgccttggcccggcgagacaggttgtgCAGGGCGAGTCggg                                                                                                                                        <  1:79324‑M1/14‑1 (MQ=255)                   cgcgcccggcgctggcgccggtgaacgcgcctttttcgtggccgaacagttcggattcgatcagcgtttcggggatggccgcgcagttcaccgagatcatcggtgccttggcccggcgagacaggttgtgCAGGGCGAGTCGGGCACCg                                                                                                                                   <  1:176593‑M1/19‑1 (MQ=255)                     cAGCGTCCGACAAAGGCAGCGCGGCAACGGCCAATGGCGAGATCGGCATCATCGGCTCGTGCCAGCCCATGCAGGACATGTACAGCAAGATCCGCAAGGTCGCGCCTACCGACTCCAATGTGCTGATCCAGGGCGAGTCGGGCAcc                                                                                                                                    >  8:244481/1‑146 (MQ=255)                     cAGCGTCCGACAAAGGCAGCGCGGCAACGGCCAATGGCGAGATCGGCATCATCGGCTCGTGCCAGCCCATGCAGGACATGTACAGCAAGATCCGCAAGGTCGCGCCTACCGACTCCAATGTGCTGATCCAGGGCGAGTCGGGCAcc                                                                                                                                    <  7:244481/146‑1 (MQ=255)                     cAGCGTCCCACAAAGGCAGCGCGGCAACGGCCAATGGCGAGATCGGCATCATCGGCTCGTGCCAGCCCATGCAGGACATGTACAGCAAGATCCGCAAGGTCGCGCCTACCGACTCCAATGTGCTGATCCAGGGCGAGTCGGGCACCGGt                                                                                                                                 <  7:261922/149‑1 (MQ=255)                      aGCGTCCGACAAAGGCAGCGCGGCAACGGCCAATGGCGAGATCGGCATCATCGGCTCGTGCCAGCCCATGCAGGACATGTACAGCAAGATCCGCAAGGTCGCGCCTACCGACTCCAATGTGCTGATCCAGGGCGAGTCGGGCACCGGt                                                                                                                                 >  5:233412/1‑148 (MQ=255)                        cGTCCGACAAAGGCAGCGCGGCAACGGCCAATGGCGAGATCGGCATCATCGGCTCGTGCCAGCCCATGCAGGACATGTACAGCAAGATCCGCAAGGTCGCGCCTACCGACTCCAATGTGCTGATCCAGGGCGAGTCGGGCACCGGTaaa                                                                                                                              <  3:81751/149‑1 (MQ=255)                             gACAAAGGCAGCGCGGCAACGGCCAATGGCGAGATCGGCATCATCGGCTCGTGCCAGCCCATGCAGGACATGTACAGCAAGATCCGCAAGGTCGCGCCTACCGACTCCAATGTGCTGATCCAGGGCGAGTCGGGCACCGGTAAAGAGCt                                                                                                                         >  8:134044/1‑149 (MQ=255)                             gACAAAGGCAGCGCGGCAACGGCCAATGGCGAGATCGGCATCATCGGCTCGTGCCAGCCCATGCAGGACATGTACAGCAAGATCCGCAAGGTCGCGCCTACCGACTCCAATGTGCTGATCCAGGGCGAGTCGGGCACCGGTAAAGAGCt                                                                                                                         <  1:280735/149‑1 (MQ=255)                             gACAAAGGCAGCGCGGCAACGGCCAATGGCGAGATCGGCATCATCGGCTCGTGCCAGCCCATGCAGGACATGTACAGCAAGATCCGCAAGGTCGCGCCTACCGACTCCAATGTGCTGATCCAGGGCGAGTCGGGCACCGGTAAAGAGCt                                                                                                                         >  1:38070/1‑149 (MQ=255)                                   ggCAGCGCGGCAACGGCCAATGGCGAGATCGGCATCATCGGCTCGTGCCAGCCCATGCAGGACATGTACAGCAAGATCCGCAAGGTCGCGCCTACCGACTCCAATGTGCTGATCCAGGGCGAGTCGGGCACCGGTAAAGAGCTGGTGGc                                                                                                                   >  2:206136/1‑149 (MQ=255)                                     cAGCGCGGCAACGGCCAATGGCGAGATCGGCATCATCGGCTCGTGCCAGCCCATGCAGGACATGTACAGCAAGATCCGCAAGGTCGCGCCTACCGACTCCAATGTGCTGATCCAGGGCGAGTCGGGCACCGGTAAAGAGCTGGTGGccc                                                                                                                 <  1:276235/149‑1 (MQ=255)                                      aGCGCGGCAACGGCCAATGACGAGATCGGCATCATCGGCTCGTGCCAGCCCATGCAGGACATGTACAGCAAGATCCGCAAGGTCGCGCCTACCGACTCCAATGTGCTGATCCAGGGCGAGTCGGGCACCGGTAAAGAGCTGGTGGCCcg                                                                                                                >  1:60736/1‑149 (MQ=255)                                          cgGCAACGGCCAATGGCGAGATCGGCATCATCGGCTCGTGCCAGCCCATGCAGGACATGTACAGCAAGATCCGCAAGGTCGCGCCTACCGACTCCAATGTGCTGATCCAGGGCGAGTCGGGCACCGGTAAAGAGCTGGTGGCCCGCGcc                                                                                                            <  4:336439/149‑1 (MQ=255)                                            gCAACGGCCAATGGCGAGATCGGCATCATCGGCTCGTGCCAGCCCATGCAGGACATGTACAGCAAGATCCGCAAGGTCGCGCCTACCGACTCCAATGTGCTGATCCAGGGCGAGTCGGGCACCGGTAAAGAGCTGGTGGCCCGCGCCCt                                                                                                          >  6:355425/1‑149 (MQ=255)                                             gcgcctttttcgtggccgaacagttcggattcgatcagcgtttcggggatggccgcgcagttcaccgagatcatcggtgccttggcccggcgagacaggttgtgCAGGGCGAGTCGGGCACCGGTAAAGAGCTGGTGGCCCGCGCCCTg                                                                                                         >  2:79324‑M1/105‑149 (MQ=255)                                              cgcctttttcgtggccgaacagttcggattcgatcagcgtttcggggatggccgcgcagttcaccgagatcatcggtgccttggcccggcgagacaggttgtgCAGGGCGAGTCGGGCACCGGTAAAGAGCTGGTGGCCCGCGCCCTGc                                                                                                        >  2:176593‑M1/104‑149 (MQ=255)                                               aCGGCCAATGGCGAGATCGGCATCATCCGCTCGTGCCAGCCCATGCAGGACATGTACAGCAAGATCCCCAAGGTCGCGCCTACCGACTCCAATGTGCTGATCCAGGGCGAGTCTGTCACCGGTAAAGAGCTGGTGGCCCGCGCCCTGca                                                                                                       <  3:51456/149‑1 (MQ=255)                                                    atctGGCGAGATCGGCATCATCGGCTCGTGCCAGCCCATGCAGGACATGTACAGCAAGATCCGCAAGGTCGCGCCTACCGACTCCAATGTGCTGATCCAGGGCGAGTCGGGCACCGGTAAAGAGCTGGTGGCCCGCGCCCTGCACAAcc                                                                                                  <  3:31326/146‑1 (MQ=255)                                                         gCGAGATCGGCATCATCGGCTCGTGCCAGCCCATGCAGGACATGTACAGCAAGATCCGCAAGGTCGCGCCGACCGACTCCAATGTGCTGATCCAGGGCGCGTCGGGCACCGGTAAAGAGCTGGTGGCCCGCGCCCTGcacagca                                                                                                  >  4:31326/1‑141 (MQ=255)                                                          cGAGATCGGCATCATCGGCTCGTGCCAGCCCATGCAGGACATGTACAGCAAGATCCGCAAGGTCGCGCCTACCGACTCCAATGTGCTGATCCAGGGCGAGTCGGGCACCGGTAAAGAGCTGGTGGCCCGCGCCCTGCACAACCTGtctc                                                                                            <  6:31338/149‑1 (MQ=255)                                                          cGAGATCGGCATCATCGGCTCGTGCCAGCCCATGCAGGACATGTACAGCAAGATCCGCAAGGTCGCGCCTACCGACTCCAATGTGCTGATCCAGGGCGAGTCGGGCACCGGTAAAGAGCTGGTGGCCCGCGCCCTGCACAACCTGtctc                                                                                            >  5:31338/1‑149 (MQ=255)                                                                cGGCATCATCGGCTCGTGCCAGCCCATGCAGGACATGTACAGCAAGATCCGCAAGGTCGCGCCTACCGACTCCAATGTGCTGATCCAGGGCGAGTCGGGCACCGGTAAAGAGCTGGTGGCCCGCGccc                                                                                                           <  4:10357/128‑1 (MQ=255)                                                                cGGCATCATCGGCTCGTGCCAGCCCATGCAGGACATGTACAGCAAGATCCGCAAGGTCGCGCCTACCGACTCCAATGTGCTGATCCAGGGCGAGTCGGGCACCGGTAAAGAGCTGGTGGCCCGCGccc                                                                                                           >  3:10357/1‑128 (MQ=255)                                                                     tcatcGGCTCGTGCCAGCCCATGCAGGACATGTACAGCAAGATCCGCAAGGTCGCGCCTACCGACTCCAATGTGCTGATCCAGGGCGAGTCGGGCACCGGTAAAGAGCTGGTGGCCCGCGCCCTGCACAACCTGTCTCGCCGGGCCAAg                                                                                 <  8:89504/149‑1 (MQ=255)                                                                          ggCTCGTGCCAGCCCATGCAGGACATGTACAGCAAGATCCGCAAGGTCGCGCCTACCTACTCCAATGTGCTGATCCAGGGCGAGTCGGGCACCGGTAAAGAGCTGGTGGCCCGCGCCCTGCACAACCTGTCTCGCCGGGCCAAGGCAc                                                                             <  7:66594/148‑1 (MQ=255)                                                                          ggCTCGTGCCAGCCCATGCAGGACATGTACAGCAAGATCCGCAAGGTCGCGCCTACCGACTCCAATGTGCTGATCCAGGGCGAGTCGGGCACCGGTAAAGAGCTGGTGGCCCGCGCCCTGCACAACCTGTCTCGCCGGGCCAAGGCAc                                                                             <  2:60736/148‑1 (MQ=255)                                                                             tCGTGCCAGCCCATGCAGGACATGTACAGCAAGATCCGCAAGGTCGCGCCTACCGACTCCAATGTGCTGATCCAGGGCGAGTCGGGCACCGGTAAAGAGCTGGTGGCCCGCGCCCTGCACAACCTGTCTCGCCGGGCCAAGGCACCgat                                                                         >  6:299879/1‑149 (MQ=255)                                                                                tGCCAGCCCATGCAGGACATGTACAGCAAGATCCGCAAGGTCGCGCCTACCGACTCCAATGTGCTGATCCAGGGCGAGTCGGGCACCGGTAAAGAGCTGGTGGCCCGCGCCCTGCACAACCTGTCTCGCCGGGCCAAGGCACCgatgat                                                                      <  1:206136/149‑1 (MQ=255)                                                                                  ccAGCCCATGCAGGACATGTACAGCAAGATCCGCAAGGTCGCGCCTACCGACTCCAATGTGCTGATCCAGGGCGAGTCGGGCACCGGGAAAGAGCTGGTGGCCCGCGCCCTGCACAACCTGTCTCGCCCGGCCAAGGCACCGATGAtct                                                                    >  8:172554/1‑149 (MQ=255)                                                                                   cAGCCCATGCAGGACATGTACAGCAAGATCCGCAAGGTCGCGCCTACCGACTCCAATGTGCTGATCCAGGGCGAGTCGGGCACCGGTAAAGAGCTGGTGGCCCGCGCCCTGCACAACCTGTCTCGCCGGGCCAAGGCACCGATGAtctc                                                                   <  6:233412/149‑1 (MQ=255)                                                                                    aGCCCATGCAGGACATGTACAGCAAGATCCGCAAGGTCGCGCCTACCGACTCCAATGTGCTGATCCAGGGCGAGTCGGGCACCGGTAAAGAGCTGGTGGCCCGCGCCCTGCACAACCTGTCTCGCCGGGCCAAGGCACCGATGATCTCg                                                                  >  8:333915/1‑149 (MQ=255)                                                                                     tttcggggatggccgcgcagttcaccgagatcatcggtgccttggcccggcgagacaggttgtgCAGGGCGAGTCGGGCACCGGTAAAGAGCTGGTGGCCCGCGCCCTGCACaa                                                                                                    <  6:107550‑M1/50‑1 (MQ=255)                                                                                     tttcggggatggccgcgcagttcaccgagatcatcggtgccttggcccggcgagacaggttgtgCAGGGCGAGTCGGGCACCGGTAAAGAGCTGGTGGCCCGCGCCCTGCACaa                                                                                                    >  5:107550‑M1/65‑114 (MQ=255)                                                                                     gCCCATGCAGGACATGTACAGCAAGATCCGCAAGGTCGCGCCTACCGACTCCAATGTGCTGATCCAGGGCGAGTCGGGCACCGGTAAAGAGCTGGTGGCCCGCGCCCTGCACAACCTGTCTCGCCGGGCCAAGGCACCGATGATCTCgg                                                                 <  2:68786/149‑1 (MQ=255)                                                                                       ccATGCAGGACATGTAGAGCAAGATCCGCAAGGTCCCGCCTACCGACTCCAATGTGCTGATCCAGGGCGAGTCGGGCACCGGTAAAGAGCTCGTGGCCCGCGCCCTGCACAACCTGTCTCGCCGGGCCAAGGCACCGATGATCTCGGTg                                                               <  6:64240/149‑1 (MQ=255)                                                                                       ccATGCAGGACATGTACAGCAAGATCCGCAAGGTCGCGCCTACCGACTCCAATGTGCTGATCCAGGGCGAGTCGGGCACCGGTAAAGAGCTGGTGGCCCGCGCCCTGCACAACCTGTCTCGCCGGGCCAAGGCACCGATGATCTCGGTg                                                               <  3:313519/149‑1 (MQ=255)                                                                                       ccATGCAGGACATGTACAGCAAGATCCGCAAGGTCGCGCCTACCGACTCCAATGTGCTGATCCAGGGCGAGTCGGGCACCGGTAAAGAGCTGGTGGCCCGCGCCCTGCACAACCTGTCTCGCCGGGCCAAGGCACCGATGATCTCGGTg                                                               <  5:355425/149‑1 (MQ=255)                                                                                          tGCAGGACCTGTACAGCACGATCCGCAAGGGCGCGCCTACCGACTCCAATGTGCTGATCCAGGGCGAGTCGGGCACCGGTAAAGAGCTGGTGGCCCGCGCCCTGCACAACCTGTCTCGCCGGGCCAAGGCACCGATGATCTCGGTGAAc                                                            <  4:291686/149‑1 (MQ=255)                                                                                          tGCAGGACATGTACAGCAAGATCCGCAAGGTCGCGCCTACCGACTCCAATGTGCTGATCCAGGGCGAGTCGGGCACCGGTAAAGAGCTGGTGGCCCGCGCCCTGCACAACCTGTCTCGCCGGGCCAAGGCACCGATGATCTCGGTGAAc                                                            <  8:179814/149‑1 (MQ=255)                                                                                           gCAGGACATGTACAGCAAGATCCGCAAGGTCGCGCCTACCGACTCCAATGTGCTGATCCAGGGCGAGTCGGGCACCGGTAAAGAGCTGGTGGCCCgcgc                                                                                                             >  6:143087/1‑99 (MQ=255)                                                                                           gCAGGACATGTACAGCAAGATCCGCAAGGTCGCGCCTACCGACTCCAATGTGCTGATCCAGGGCGAGTCGGGCACCGGTAAAGAGCTGGTGGCCCgcgc                                                                                                             <  5:143087/99‑1 (MQ=255)                                                                                             aGGACATGTACAGCAAGATCCGCAAGGTCGCGCCTACCGACTCCAATGTGCTGATCCAGGGCGAGTCGGGCACCGGTAAAGAGCTGGTGGCCCGCGCCCTGCACAACCTGTCTCGCCGGGCCAAGGCACCGATGATCTCGGTGAACTgc                                                         <  1:348391/149‑1 (MQ=255)                                                                                                 cATGTACTGCAAGATCCGCAAGGTCGCGGCTACCGACTCCAATGTGCTGATCCAGGGCGAGTCGGGCACCGGTAAAGAGCTGGTGGCCCGCGCCCTGCACAACCTGTCTCGCCGGGCCAAGGCACCGATGATCTCGGTGAACTGCGCgg                                                     <  5:299879/149‑1 (MQ=255)                                                                                                  aTGTACAGCAAGATCCGCAAGGTCGCGCCTACCGACTCCAATGTGCTGATCCAGGGCGAGTCGGGCACCGGTAAAGAGCTGGTGGCCCGCGCCCTGCACAACCTGTCTCGCCGGGCCAAGGCACCGATGATCTCGGTGAACTGCGCGGc                                                    >  7:271940/1‑149 (MQ=255)                                                                                                    gTACAGCAAGATCCGCAAGGTCGCGCCTACCGACTCCAATGTGCTGATCCAGGGCGAGTCGGGCACCGGTAAAGAGCTGGTGGCCCGCGCCCTGCACAACCTGTCTCGCCGGGCCAAGGCACCGATGATCTCGGTGAACTGCGCGGcc                                                   >  4:56622/1‑148 (MQ=255)                                                                                                          cAAGATCCGCAAGGTCGCGCCTACCGACTCCAATGTGCTGATCCAGGGCGAGTCGGGCACCGGTAAAGAGCTGGTGGCCCGCGCCCTGCACAACCTGTCTCGCCGGGCCAAGGCACCGATGATCTCGGTGAACTGCGCGGCCATCCCCg                                            <  7:333915/149‑1 (MQ=255)                                                                                                                ccGCAAGGTCGCGCCTACCGACTCCAATGTGCTGATCCAGGGCGAGTCGGGCACCGGTAAAGAGCTGGTGGCCCGCGCCCTGCACAACCTGTCTCGCCGTGCCAAGGCACCGATGATCTCGGTGAACTTCCCGGCCATCCCCGAAACg                                       >  8:144572/1‑148 (MQ=255)                                                                                                                ccGCAAGGTCGCGCCTACCGACTCCAATGTGCTGATCCAGGGCGAGTCGGGCACCGGTAAAGAGCTGGTGGCCCGCGCCCTGCACAACCTGTCTCGCCGGGCCAAGGCACCGATGATCTCGGTGAACTGCGCGGCCATCCCCGAAACGc                                      >  8:66743/1‑149 (MQ=255)                                                                                                                ccGCAAGGTCGCGCCTACCGACTCCAATGTGCTGATCCAGGGCGAGTCGGGCACCGGTAAAGAGCTGGTGGCCCGCGCCCTGCACAACCTGTCTCGCCGGGCCAAGGCACCGATGATCTCGGTGAACTGCGCGGCCATCCCCGAAACGc                                      >  8:326455/1‑149 (MQ=255)                                                                                                                 cGCAAGGTCGCGCCTACCGACTCCAATGTGCTGATCCAGGGCGAGTCGGGCACCGGTAAAGAGCTGGTGGCCCGCGCCCTGCACAACCTGTCTCGCCGGGCCAAGGCACCGATGATCTCGGTGAACTGCGCGGCCATCCCCGAAACGCt                                     <  7:134044/149‑1 (MQ=255)                                                                                                                   cAAGGTCGCGCCTACCGACTCCAATGTGCTGATCCAGGGCGAGTCGGGCACCGGTAAAGAGCTGGTGGCCCGCGCCCTGCACAACCTGTCTCGCCGGGCCAAGGCACCGATGATCTCGGTGAACTGCGCGGCCATCCCCGAAACGCTGa                                   >  3:40634/1‑149 (MQ=255)                                                                                                                   cAAGGTCGCGCCTACCGACTCCAATGTGCTGATCCAGGGCGAGTCGGGCACCGGTAAAGAGCTGGTGGCCCGCGCCCTGCACAACCTGTCTCGCCGGGCCAAGGCACCGATGATCTCGGTGAACTGCGCGGCCATCCCCGAAACGCTGa                                   >  5:69724/1‑149 (MQ=255)                                                                                                                    aaGGTCGCGCCTACCGACTCCAATGTGCTGATCCAGGGCGAGTCGGGCACCGGTAAAGAGCTGGTGGCCCGCGCCCTGCACAACCTGTCTCGCCGGGCCAAGGCACCGATGATCTCGGTGAACTGCGCGGCCATCCCCGAAACGCTGAt                                  >  5:88824/1‑149 (MQ=255)                                                                                                                     aGGTCGCGCCTACCGACTCCAATGTGCTGATCCAGGGCGAGTCGGGCACCGGTAAAGAGCTGGTGGCCCGCGCCCTGCACAACCTGTCTCGCCGGGCCAAGGCACCGATGATCTCGGTGAACTGCGCGGCCATCCCCGAAACGCTGATc                                 <  4:144532/149‑1 (MQ=255)                                                                                                                        tCGCGCCTACCGACTCCAATGTGCTGATCCAGGGCGAGTCGGGCACCGGTAAAGAGCTGGTGGCCCGCGCCCTGCACAACCTGTCTCGCCGGGCCAAGGCACCGATGATCTCGGTGAACTGCGCGGCCATCCCCGAAACGCTGATCGa                               >  4:289423/1‑148 (MQ=255)                                                                                                                          gcgcCTACCGACTCCAATGTGCTGATCCAGGGCGAGTCGGGCACCGGTAAAGAGCTGGTGGCCCGCGCCCTGCACAACCTGTCTCGCCGGGCCAAGGCACCGATGATCTCGGTGAACTGCGCGGCCATCCCCGAAACGCTGATCGAAt                             <  3:266758/148‑1 (MQ=255)                                                                                                                           cgcCTACCGACTCCAATGTGCTGATCCAGGGCGAGTCGGGCACCGGTAAAGAGCCGGTGGCCCGCGCCCTGCACAACCTGTCTCGCCGGGCCAAGGCACCGATGATCTCGGTGAACTGCGCGGCCATCCCCGAAACGCTGATCGAATcc                           <  6:268209/149‑1 (MQ=255)                                                                                                                              cTACCGACTCCAATGTGCTGATCCAGGGCGAGTCGGGCACCGGTAAAGAGCTGGTGGCCCGCGCCCTGCACAACCTGTCTCGCCGGGCCAAGGCACCGATGATCTCGGTGAACTGCGCGGCCATCCCCGAAACGCTGATCGAATCCGaa                        <  6:300698/149‑1 (MQ=255)                                                                                                                              cTACCGACTCCAATGTGCTGATCCAGGGCGAGTCGGGCACCGGTAAAGAGCTGGTGGCCCGCGCCCTGCACAACCTGGCTCGCCGGGCCAAGGCACCGATGATCTCGGTGAACTGCGCGGCCATCCCCGAAACGCTGATCGAATCCGaa                        <  7:118279/149‑1 (MQ=255)                                                                                                                                 ccGACTCCAATGTGCTGATCCAGGGCGAGTCGGGCACCGGTAAAGAGCTGGTGGCCCGCGCCCTGCACAACCTGTCTCGCCGGGCCAAGGCACCGATGATCTCGGTGAACTGCGCGGCCATCCCCGAAACGCTGATCGAATCCGAACTg                     >  6:371331/1‑149 (MQ=255)                                                                                                                                 ccGACTCCAATGTGCTGATCCAGGGCGAGTCGGGCACCGGTAAAGAGCTGGTGGCCCGCGCCCTGCACAACCTGTCTCGCCGGGCCAAGGCACCGATGATCTCGGTGAACTGCGCGGCCATCCCCGAAACGCTGATCGAATCCGAACTg                     >  8:110477/1‑149 (MQ=255)                                                                                                                                     cTCCAATGTGCTGATCCAGGGCGAGTCGGGCACCGGTAAAGAGCTGGTGGCCCGCGCCCTGCACAACCTGTCTCGCCGGGCCAAGGCACCGATGATCTCGGTGAACTGCGCGGCCATCCCCGAAACGCTGATCGAATCCGAACTGTTCg                 <  2:38070/149‑1 (MQ=255)                                                                                                                                     cTCCAATGTGCTGATCCAGGGCGAGTCGGGCACCGGTAAAGAGCTGGTGGCCCGCGCCCTGCACAACCTGTCTCGCCGGGCCAAGGCACCGATGATCTCGGTGAACTGCGCGGCCATCCCCGAAACGCTGATCGAATCCGAACTGTTCg                 >  6:279306/1‑149 (MQ=255)                                                                                                                                      tCCAATGTGCTGATCCAGGGCGAGTCGGGCACCGGTAAAGAGCTGGTGGCCCGCGCCCTGCACAACCTGTCTCGCCGGGCCAAGGCACCGATGATCTCGGTGAACTGCGCGGCCATCCCCGAAACGCTGATCGAATCCGAACTGTTCgg                >  6:319220/1‑149 (MQ=255)                                                                                                                                        cAATGTGCTGATCCAGGGCGAGTCGGGCACCGGTAAAGAGCTGGTGGCCCGCGCGCTGCACAACCTGTCTCGCCGGGCCAAGGCACCGATGATCTCGGTGAACTGCGCGGCCATCCCCGAAACGCTGATCGAATCCGAACTGTTCGGc               <  6:183410/148‑1 (MQ=255)                                                                                                                                        cAATGTGCTGATCCAGGGCGAGTCGGGCACCGGTAAAGAGCTGGTGGCCCGCGCCCTGCACAACCTGTCTCGCCGGGCCAAGGCACCGATGATCTCGGTGAACTGCGCGGCCATCCCCGAAACGCTGATCGAATCCGAACTGTTCGGcc              <  3:56622/149‑1 (MQ=255)                                                                                                                                        cAATGTGCTGATCCAGGGCGAGTCGGGCACCGGTAAAGAGCTGGTGGCCCGCGCCCTGCACAACCTGTCTCGCCGGGCCAAGGCACCGATGATCTCGGTGAACTGCGCGGCCATCCCCGAAACGCTGATCGAATCCGAACTGTTCGGc               >  3:67304/1‑148 (MQ=255)                                                                                                                                        cAATGTGATTATCCAGGGAGAGTCGGGAACCGGTAAAGAGCTGGTGTCCCGCGCCCTGCACAACCTGTCTCGACGGGCCAATGCACCGATGATCTCGGTGAACTGCGCGGCCATCCCCGAAACGCTGATCGAATCCGAACTGTTCgg                <  7:144572/147‑1 (MQ=255)                                                                                                                                         aaTGTGCTGATCCAGGGCGAGTCGGGCACCGGTAAAGAGCTGGTGGCCCGCGCCCTGCACAACCTGTCTCGCCGGGCCAAGGCACCGATGATCTCGGTGAACTGCGCGGCCATCCCCGAAACGCTGATCGAATCCGAACTGTTCGGCCa             <  8:271940/149‑1 (MQ=255)                                                                                                                                          atctgCTGATCCAGGGCGAGTCGGGCACCCGTAAAGAGCTGCTGGCCCCCGCCCTGCACAACCTGTCTCGCCGGGCCAAGGCACCGATGATCTCGCTGAACTCCGCGGCCATCCCCGAAACGCTCATCGAATCCGAACTGTTCGGacac            >  8:98564/4‑149 (MQ=255)                                                                                                                                               cTGATCCAGGGCGAGTCGGGCACCGGTAAAGAGCTGGTGGCCCGCGCCCTGCACAACCTGTCTCGCCGGGCCAAGGCACCGATGATCTCGGTGAACTGCGCGGCCATCCCCGAAACGCTGATCGAATCCGAACTGTTCGGCCACGaaaa       <  5:279306/149‑1 (MQ=255)                                                                                                                                                tGATCCAGGGCGAGTCGGGCACCGGTAAAGAGCTGGTGGCCCGCGCCCTGCACAACCTGTCTCGCCGGGCCAAGGCACCGATGATCTCGGTGAACTGCGCGGCCATCCCCGAAACGCTGATCGAATCCGAACTGTTCGGCCACGaaa        >  2:212991/1‑147 (MQ=255)                                                                                                                                                 gATCCAGGGCGAGTCGGGCACCGGTAAAGAGCTGGTGGCCCGCGCCCTGCACAACCTGTCTCGCCGGGCCAAGGCACCGATGATCTCGGTGAACTGCGCGGCCATCCCCGAAACGCTGATCGAATCCGAACTGTTCGGCCACGAAAAAg     >  8:147959/1‑149 (MQ=255)                                                                                                                                                 gATCCAGGGCGAGTCGGGCACCGGTAAAGAGCTGGTGGCCCGCGCCCTGCACAACCTGTCTCGCCGGGCCAAGGCACCGATGATCTCGGTGAACTGCGCGGCCATCCCCGAAACGCTGATCGAATCCGAACTGTTCGGCCACGAAAAAg     >  1:138642/1‑149 (MQ=255)                                                                                                                                                  aTCCAGGGCGAGTCGGGCACCGGTAAAGAGCTGGTGGCCCGCGCCCTGCACAACCTGTCTCGCCGGGCCAAGGCACCGATGATCTCGGTGAACTGCGCGGCCATCCCCGAAACGCTGATCGAATCCGAACTGTTCGGCCACGaaaaa      <  3:289423/147‑1 (MQ=255)                                                                                                                                                   tCCAGGGCGAGTCGGGCACCGGTAAAGAGCTGGTGGCCCGCGCCCTGCACAACCTGTCTCGCCGGGCCAAGGCACCGATGATCTCGGTGAACTGCGCGGCCATCCCCGAAACGCTGATCGAATCCGAACTGTTCGGCCACGAAAAAGgc   <  5:319220/149‑1 (MQ=255)                                                                                                                                                    ccAGGGCGAGTCGGGCACCGGTAAAGAGCTGGTGGCCCGCGCCCTGCACAACCTGTCTCGCCGGGCCAAGGCACCGATGATCTCGGTGAACTGCGCGGCCATCCCCGAAACGCTGATCGAATCCGAACTGTTCGGCCACGAAAAAGgcg  >  2:174038/1‑149 (MQ=255)                                                                                                                                                     |                                                                                                                                                    CGCCAGCAATGGCAAGGCTACAGCGTCCGACAAAGGCAGCGCGGCAACGGCCAATGGCGAGATCGGCATCATCGGCTCGTGCCAGCCCATGCAGGACATGTACAGCAAGATCCGCAAGGTCGCGCCTACCGACTCCAATGTGCTGATCCAGGGCGAGTCGGGCACCGGTAAAGAGCTGGTGGCCCGCGCCCTGCACAACCTGTCTCGCCGGGCCAAGGCACCGATGATCTCGGTGAACTGCGCGGCCATCCCCGAAACGCTGATCGAATCCGAACTGTTCGGCCACGAAAAAGGCG  >  NC_002947/5336937‑5337232

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.