New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5337085 =	71 (1.180)	6 (0.110)	6/250	NT	8.3%	coding (535/1443 nt)	PP_4696	nitrogen regulation protein NR(I)
	?	NC_002947	5337130 =	66 (1.160)					coding (580/1443 nt)	PP_4696	nitrogen regulation protein NR(I)

AACGGCCAATGGCGAGATCGGCATCATCGGCTCGTGCCAGCCCATGCAGGACATGTACAGCAAGATCCGCAAGGTCGCGCCTACCGACTCCAATGTGCTGATCCAGGGCGAGTCGGGCACCGGTAAAGAGCTGGTGGCCCGCGCCCTGCACAACCTGTCTCGCCGGGCCAAGGCACCGATGATCTCGGTGAACTGCGCGGCCATCCCCGAAACGCTGATCGAATCCGAACTGTTCGGCCACGAAAAAGGCGCGTTCACCGGCGCCAGCGCCGGGCGCGCCGGCTTGGTGGAGGCCGC  >  NC_002947/5336982‑5337278                                                                                                                                                     |                                                                                                                                                     cgcctttttcgtggccgaacagttcggattcgatcagcgtttcggggatggccgcgcagttcaccgagatcatcggtgccttggcccggcgagacaggttgtgCAGGGCGAGTCGGGCACCGGTAAAGAGCTGGTGGCCCGCGCCCTGc                                                                                                                                                      >  2:176593‑M1/104‑149 (MQ=255)  aCGGCCAATGGCGAGATCGGCATCATCCGCTCGTGCCAGCCCATGCAGGACATGTACAGCAAGATCCCCAAGGTCGCGCCTACCGACTCCAATGTGCTGATCCAGGGCGAGTCTGTCACCGGTAAAGAGCTGGTGGCCCGCGCCCTGca                                                                                                                                                     <  3:51456/149‑1 (MQ=255)       atctGGCGAGATCGGCATCATCGGCTCGTGCCAGCCCATGCAGGACATGTACAGCAAGATCCGCAAGGTCGCGCCTACCGACTCCAATGTGCTGATCCAGGGCGAGTCGGGCACCGGTAAAGAGCTGGTGGCCCGCGCCCTGCACAAcc                                                                                                                                                <  3:31326/146‑1 (MQ=255)            gCGAGATCGGCATCATCGGCTCGTGCCAGCCCATGCAGGACATGTACAGCAAGATCCGCAAGGTCGCGCCGACCGACTCCAATGTGCTGATCCAGGGCGCGTCGGGCACCGGTAAAGAGCTGGTGGCCCGCGCCCTGcacagca                                                                                                                                                >  4:31326/1‑141 (MQ=255)             cGAGATCGGCATCATCGGCTCGTGCCAGCCCATGCAGGACATGTACAGCAAGATCCGCAAGGTCGCGCCTACCGACTCCAATGTGCTGATCCAGGGCGAGTCGGGCACCGGTAAAGAGCTGGTGGCCCGCGCCCTGCACAACCTGtctc                                                                                                                                          <  6:31338/149‑1 (MQ=255)             cGAGATCGGCATCATCGGCTCGTGCCAGCCCATGCAGGACATGTACAGCAAGATCCGCAAGGTCGCGCCTACCGACTCCAATGTGCTGATCCAGGGCGAGTCGGGCACCGGTAAAGAGCTGGTGGCCCGCGCCCTGCACAACCTGtctc                                                                                                                                          >  5:31338/1‑149 (MQ=255)                        tcatcGGCTCGTGCCAGCCCATGCAGGACATGTACAGCAAGATCCGCAAGGTCGCGCCTACCGACTCCAATGTGCTGATCCAGGGCGAGTCGGGCACCGGTAAAGAGCTGGTGGCCCGCGCCCTGCACAACCTGTCTCGCCGGGCCAAg                                                                                                                               <  8:89504/149‑1 (MQ=255)                             ggCTCGTGCCAGCCCATGCAGGACATGTACAGCAAGATCCGCAAGGTCGCGCCTACCTACTCCAATGTGCTGATCCAGGGCGAGTCGGGCACCGGTAAAGAGCTGGTGGCCCGCGCCCTGCACAACCTGTCTCGCCGGGCCAAGGCAc                                                                                                                           <  7:66594/148‑1 (MQ=255)                             ggCTCGTGCCAGCCCATGCAGGACATGTACAGCAAGATCCGCAAGGTCGCGCCTACCGACTCCAATGTGCTGATCCAGGGCGAGTCGGGCACCGGTAAAGAGCTGGTGGCCCGCGCCCTGCACAACCTGTCTCGCCGGGCCAAGGCAc                                                                                                                           <  2:60736/148‑1 (MQ=255)                                tCGTGCCAGCCCATGCAGGACATGTACAGCAAGATCCGCAAGGTCGCGCCTACCGACTCCAATGTGCTGATCCAGGGCGAGTCGGGCACCGGTAAAGAGCTGGTGGCCCGCGCCCTGCACAACCTGTCTCGCCGGGCCAAGGCACCgat                                                                                                                       >  6:299879/1‑149 (MQ=255)                                   tGCCAGCCCATGCAGGACATGTACAGCAAGATCCGCAAGGTCGCGCCTACCGACTCCAATGTGCTGATCCAGGGCGAGTCGGGCACCGGTAAAGAGCTGGTGGCCCGCGCCCTGCACAACCTGTCTCGCCGGGCCAAGGCACCgatgat                                                                                                                    <  1:206136/149‑1 (MQ=255)                                     ccAGCCCATGCAGGACATGTACAGCAAGATCCGCAAGGTCGCGCCTACCGACTCCAATGTGCTGATCCAGGGCGAGTCGGGCACCGGGAAAGAGCTGGTGGCCCGCGCCCTGCACAACCTGTCTCGCCCGGCCAAGGCACCGATGAtct                                                                                                                  >  8:172554/1‑149 (MQ=255)                                      cAGCCCATGCAGGACATGTACAGCAAGATCCGCAAGGTCGCGCCTACCGACTCCAATGTGCTGATCCAGGGCGAGTCGGGCACCGGTAAAGAGCTGGTGGCCCGCGCCCTGCACAACCTGTCTCGCCGGGCCAAGGCACCGATGAtctc                                                                                                                 <  6:233412/149‑1 (MQ=255)                                       aGCCCATGCAGGACATGTACAGCAAGATCCGCAAGGTCGCGCCTACCGACTCCAATGTGCTGATCCAGGGCGAGTCGGGCACCGGTAAAGAGCTGGTGGCCCGCGCCCTGCACAACCTGTCTCGCCGGGCCAAGGCACCGATGATCTCg                                                                                                                >  8:333915/1‑149 (MQ=255)                                        tttcggggatggccgcgcagttcaccgagatcatcggtgccttggcccggcgagacaggttgtgCAGGGCGAGTCGGGCACCGGTAAAGAGCTGGTGGCCCGCGCCCTGCACaa                                                                                                                                                  <  6:107550‑M1/50‑1 (MQ=255)                                        tttcggggatggccgcgcagttcaccgagatcatcggtgccttggcccggcgagacaggttgtgCAGGGCGAGTCGGGCACCGGTAAAGAGCTGGTGGCCCGCGCCCTGCACaa                                                                                                                                                  >  5:107550‑M1/65‑114 (MQ=255)                                        gCCCATGCAGGACATGTACAGCAAGATCCGCAAGGTCGCGCCTACCGACTCCAATGTGCTGATCCAGGGCGAGTCGGGCACCGGTAAAGAGCTGGTGGCCCGCGCCCTGCACAACCTGTCTCGCCGGGCCAAGGCACCGATGATCTCgg                                                                                                               <  2:68786/149‑1 (MQ=255)                                          ccATGCAGGACATGTAGAGCAAGATCCGCAAGGTCCCGCCTACCGACTCCAATGTGCTGATCCAGGGCGAGTCGGGCACCGGTAAAGAGCTCGTGGCCCGCGCCCTGCACAACCTGTCTCGCCGGGCCAAGGCACCGATGATCTCGGTg                                                                                                             <  6:64240/149‑1 (MQ=255)                                          ccATGCAGGACATGTACAGCAAGATCCGCAAGGTCGCGCCTACCGACTCCAATGTGCTGATCCAGGGCGAGTCGGGCACCGGTAAAGAGCTGGTGGCCCGCGCCCTGCACAACCTGTCTCGCCGGGCCAAGGCACCGATGATCTCGGTg                                                                                                             <  5:355425/149‑1 (MQ=255)                                          ccATGCAGGACATGTACAGCAAGATCCGCAAGGTCGCGCCTACCGACTCCAATGTGCTGATCCAGGGCGAGTCGGGCACCGGTAAAGAGCTGGTGGCCCGCGCCCTGCACAACCTGTCTCGCCGGGCCAAGGCACCGATGATCTCGGTg                                                                                                             <  3:313519/149‑1 (MQ=255)                                             tGCAGGACCTGTACAGCACGATCCGCAAGGGCGCGCCTACCGACTCCAATGTGCTGATCCAGGGCGAGTCGGGCACCGGTAAAGAGCTGGTGGCCCGCGCCCTGCACAACCTGTCTCGCCGGGCCAAGGCACCGATGATCTCGGTGAAc                                                                                                          <  4:291686/149‑1 (MQ=255)                                             tGCAGGACATGTACAGCAAGATCCGCAAGGTCGCGCCTACCGACTCCAATGTGCTGATCCAGGGCGAGTCGGGCACCGGTAAAGAGCTGGTGGCCCGCGCCCTGCACAACCTGTCTCGCCGGGCCAAGGCACCGATGATCTCGGTGAAc                                                                                                          <  8:179814/149‑1 (MQ=255)                                                aGGACATGTACAGCAAGATCCGCAAGGTCGCGCCTACCGACTCCAATGTGCTGATCCAGGGCGAGTCGGGCACCGGTAAAGAGCTGGTGGCCCGCGCCCTGCACAACCTGTCTCGCCGGGCCAAGGCACCGATGATCTCGGTGAACTgc                                                                                                       <  1:348391/149‑1 (MQ=255)                                                    cATGTACTGCAAGATCCGCAAGGTCGCGGCTACCGACTCCAATGTGCTGATCCAGGGCGAGTCGGGCACCGGTAAAGAGCTGGTGGCCCGCGCCCTGCACAACCTGTCTCGCCGGGCCAAGGCACCGATGATCTCGGTGAACTGCGCgg                                                                                                   <  5:299879/149‑1 (MQ=255)                                                     aTGTACAGCAAGATCCGCAAGGTCGCGCCTACCGACTCCAATGTGCTGATCCAGGGCGAGTCGGGCACCGGTAAAGAGCTGGTGGCCCGCGCCCTGCACAACCTGTCTCGCCGGGCCAAGGCACCGATGATCTCGGTGAACTGCGCGGc                                                                                                  >  7:271940/1‑149 (MQ=255)                                                       gTACAGCAAGATCCGCAAGGTCGCGCCTACCGACTCCAATGTGCTGATCCAGGGCGAGTCGGGCACCGGTAAAGAGCTGGTGGCCCGCGCCCTGCACAACCTGTCTCGCCGGGCCAAGGCACCGATGATCTCGGTGAACTGCGCGGcc                                                                                                 >  4:56622/1‑148 (MQ=255)                                                             cAAGATCCGCAAGGTCGCGCCTACCGACTCCAATGTGCTGATCCAGGGCGAGTCGGGCACCGGTAAAGAGCTGGTGGCCCGCGCCCTGCACAACCTGTCTCGCCGGGCCAAGGCACCGATGATCTCGGTGAACTGCGCGGCCATCCCCg                                                                                          <  7:333915/149‑1 (MQ=255)                                                                   ccGCAAGGTCGCGCCTACCGACTCCAATGTGCTGATCCAGGGCGAGTCGGGCACCGGTAAAGAGCTGGTGGCCCGCGCCCTGCACAACCTGTCTCGCCGTGCCAAGGCACCGATGATCTCGGTGAACTTCCCGGCCATCCCCGAAACg                                                                                     >  8:144572/1‑148 (MQ=255)                                                                   ccGCAAGGTCGCGCCTACCGACTCCAATGTGCTGATCCAGGGCGAGTCGGGCACCGGTAAAGAGCTGGTGGCCCGCGCCCTGCACAACCTGTCTCGCCGGGCCAAGGCACCGATGATCTCGGTGAACTGCGCGGCCATCCCCGAAACGc                                                                                    >  8:326455/1‑149 (MQ=255)                                                                   ccGCAAGGTCGCGCCTACCGACTCCAATGTGCTGATCCAGGGCGAGTCGGGCACCGGTAAAGAGCTGGTGGCCCGCGCCCTGCACAACCTGTCTCGCCGGGCCAAGGCACCGATGATCTCGGTGAACTGCGCGGCCATCCCCGAAACGc                                                                                    >  8:66743/1‑149 (MQ=255)                                                                    cGCAAGGTCGCGCCTACCGACTCCAATGTGCTGATCCAGGGCGAGTCGGGCACCGGTAAAGAGCTGGTGGCCCGCGCCCTGCACAACCTGTCTCGCCGGGCCAAGGCACCGATGATCTCGGTGAACTGCGCGGCCATCCCCGAAACGCt                                                                                   <  7:134044/149‑1 (MQ=255)                                                                      cAAGGTCGCGCCTACCGACTCCAATGTGCTGATCCAGGGCGAGTCGGGCACCGGTAAAGAGCTGGTGGCCCGCGCCCTGCACAACCTGTCTCGCCGGGCCAAGGCACCGATGATCTCGGTGAACTGCGCGGCCATCCCCGAAACGCTGa                                                                                 >  3:40634/1‑149 (MQ=255)                                                                      cAAGGTCGCGCCTACCGACTCCAATGTGCTGATCCAGGGCGAGTCGGGCACCGGTAAAGAGCTGGTGGCCCGCGCCCTGCACAACCTGTCTCGCCGGGCCAAGGCACCGATGATCTCGGTGAACTGCGCGGCCATCCCCGAAACGCTGa                                                                                 >  5:69724/1‑149 (MQ=255)                                                                       aaGGTCGCGCCTACCGACTCCAATGTGCTGATCCAGGGCGAGTCGGGCACCGGTAAAGAGCTGGTGGCCCGCGCCCTGCACAACCTGTCTCGCCGGGCCAAGGCACCGATGATCTCGGTGAACTGCGCGGCCATCCCCGAAACGCTGAt                                                                                >  5:88824/1‑149 (MQ=255)                                                                        aGGTCGCGCCTACCGACTCCAATGTGCTGATCCAGGGCGAGTCGGGCACCGGTAAAGAGCTGGTGGCCCGCGCCCTGCACAACCTGTCTCGCCGGGCCAAGGCACCGATGATCTCGGTGAACTGCGCGGCCATCCCCGAAACGCTGATc                                                                               <  4:144532/149‑1 (MQ=255)                                                                           tCGCGCCTACCGACTCCAATGTGCTGATCCAGGGCGAGTCGGGCACCGGTAAAGAGCTGGTGGCCCGCGCCCTGCACAACCTGTCTCGCCGGGCCAAGGCACCGATGATCTCGGTGAACTGCGCGGCCATCCCCGAAACGCTGATCGa                                                                             >  4:289423/1‑148 (MQ=255)                                                                             gcgcCTACCGACTCCAATGTGCTGATCCAGGGCGAGTCGGGCACCGGTAAAGAGCTGGTGGCCCGCGCCCTGCACAACCTGTCTCGCCGGGCCAAGGCACCGATGATCTCGGTGAACTGCGCGGCCATCCCCGAAACGCTGATCGAAt                                                                           <  3:266758/148‑1 (MQ=255)                                                                              cgcCTACCGACTCCAATGTGCTGATCCAGGGCGAGTCGGGCACCGGTAAAGAGCCGGTGGCCCGCGCCCTGCACAACCTGTCTCGCCGGGCCAAGGCACCGATGATCTCGGTGAACTGCGCGGCCATCCCCGAAACGCTGATCGAATcc                                                                         <  6:268209/149‑1 (MQ=255)                                                                                 cTACCGACTCCAATGTGCTGATCCAGGGCGAGTCGGGCACCGGTAAAGAGCTGGTGGCCCGCGCCCTGCACAACCTGTCTCGCCGGGCCAAGGCACCGATGATCTCGGTGAACTGCGCGGCCATCCCCGAAACGCTGATCGAATCCGaa                                                                      <  6:300698/149‑1 (MQ=255)                                                                                 cTACCGACTCCAATGTGCTGATCCAGGGCGAGTCGGGCACCGGTAAAGAGCTGGTGGCCCGCGCCCTGCACAACCTGGCTCGCCGGGCCAAGGCACCGATGATCTCGGTGAACTGCGCGGCCATCCCCGAAACGCTGATCGAATCCGaa                                                                      <  7:118279/149‑1 (MQ=255)                                                                                    ccGACTCCAATGTGCTGATCCAGGGCGAGTCGGGCACCGGTAAAGAGCTGGTGGCCCGCGCCCTGCACAACCTGTCTCGCCGGGCCAAGGCACCGATGATCTCGGTGAACTGCGCGGCCATCCCCGAAACGCTGATCGAATCCGAACTg                                                                   >  8:110477/1‑149 (MQ=255)                                                                                    ccGACTCCAATGTGCTGATCCAGGGCGAGTCGGGCACCGGTAAAGAGCTGGTGGCCCGCGCCCTGCACAACCTGTCTCGCCGGGCCAAGGCACCGATGATCTCGGTGAACTGCGCGGCCATCCCCGAAACGCTGATCGAATCCGAACTg                                                                   >  6:371331/1‑149 (MQ=255)                                                                                        cTCCAATGTGCTGATCCAGGGCGAGTCGGGCACCGGTAAAGAGCTGGTGGCCCGCGCCCTGCACAACCTGTCTCGCCGGGCCAAGGCACCGATGATCTCGGTGAACTGCGCGGCCATCCCCGAAACGCTGATCGAATCCGAACTGTTCg                                                               >  6:279306/1‑149 (MQ=255)                                                                                        cTCCAATGTGCTGATCCAGGGCGAGTCGGGCACCGGTAAAGAGCTGGTGGCCCGCGCCCTGCACAACCTGTCTCGCCGGGCCAAGGCACCGATGATCTCGGTGAACTGCGCGGCCATCCCCGAAACGCTGATCGAATCCGAACTGTTCg                                                               <  2:38070/149‑1 (MQ=255)                                                                                         tCCAATGTGCTGATCCAGGGCGAGTCGGGCACCGGTAAAGAGCTGGTGGCCCGCGCCCTGCACAACCTGTCTCGCCGGGCCAAGGCACCGATGATCTCGGTGAACTGCGCGGCCATCCCCGAAACGCTGATCGAATCCGAACTGTTCgg                                                              >  6:319220/1‑149 (MQ=255)                                                                                           cAATGTGCTGATCCAGGGCGAGTCGGGCACCGGTAAAGAGCTGGTGGCCCGCGCGCTGCACAACCTGTCTCGCCGGGCCAAGGCACCGATGATCTCGGTGAACTGCGCGGCCATCCCCGAAACGCTGATCGAATCCGAACTGTTCGGc                                                             <  6:183410/148‑1 (MQ=255)                                                                                           cAATGTGCTGATCCAGGGCGAGTCGGGCACCGGTAAAGAGCTGGTGGCCCGCGCCCTGCACAACCTGTCTCGCCGGGCCAAGGCACCGATGATCTCGGTGAACTGCGCGGCCATCCCCGAAACGCTGATCGAATCCGAACTGTTCGGcc                                                            <  3:56622/149‑1 (MQ=255)                                                                                           cAATGTGCTGATCCAGGGCGAGTCGGGCACCGGTAAAGAGCTGGTGGCCCGCGCCCTGCACAACCTGTCTCGCCGGGCCAAGGCACCGATGATCTCGGTGAACTGCGCGGCCATCCCCGAAACGCTGATCGAATCCGAACTGTTCGGc                                                             >  3:67304/1‑148 (MQ=255)                                                                                           cAATGTGATTATCCAGGGAGAGTCGGGAACCGGTAAAGAGCTGGTGTCCCGCGCCCTGCACAACCTGTCTCGACGGGCCAATGCACCGATGATCTCGGTGAACTGCGCGGCCATCCCCGAAACGCTGATCGAATCCGAACTGTTCgg                                                              <  7:144572/147‑1 (MQ=255)                                                                                            aaTGTGCTGATCCAGGGCGAGTCGGGCACCGGTAAAGAGCTGGTGGCCCGCGCCCTGCACAACCTGTCTCGCCGGGCCAAGGCACCGATGATCTCGGTGAACTGCGCGGCCATCCCCGAAACGCTGATCGAATCCGAACTGTTCGGCCa                                                           <  8:271940/149‑1 (MQ=255)                                                                                             atctgCTGATCCAGGGCGAGTCGGGCACCCGTAAAGAGCTGCTGGCCCCCGCCCTGCACAACCTGTCTCGCCGGGCCAAGGCACCGATGATCTCGCTGAACTCCGCGGCCATCCCCGAAACGCTCATCGAATCCGAACTGTTCGGacac                                                          >  8:98564/4‑149 (MQ=255)                                                                                                  cTGATCCAGGGCGAGTCGGGCACCGGTAAAGAGCTGGTGGCCCGCGCCCTGCACAACCTGTCTCGCCGGGCCAAGGCACCGATGATCTCGGTGAACTGCGCGGCCATCCCCGAAACGCTGATCGAATCCGAACTGTTCGGCCACGaaaa                                                     <  5:279306/149‑1 (MQ=255)                                                                                                   ttgtgcagggcgcgggccaccagctctttaccggtgcccgactcgccctgCACAACCTGTCTCGCCGGGCCAAGGCACCGATGATCTCGGTGAACTGCGCGGCCATCCCCGaaa                                                                                       <  6:107550‑M2/64‑1 (MQ=255)                                                                                                   ttgtgcagggcgcgggccaccagctctttaccggtgcccgactcgccctgCACAACCTGTCTCGCCGGGCCAAGGCACCGATGATCTCGGTGAACTGCGCGGCCATCCCCGaaa                                                                                       >  5:107550‑M2/51‑114 (MQ=255)                                                                                                   tGATCCAGGGCGAGTCGGGCACCGGTAAAGAGCTGGTGGCCCGCGCCCTGCACAACCTGTCTCGCCGGGCCAAGGCACCGATGATCTCGGTGAACTGCGCGGCCATCCCCGAAACGCTGATCGAATCCGAACTGTTCGGCCACGaaa                                                      >  2:212991/1‑147 (MQ=255)                                                                                                    gATCCAGGGCGAGTCGGGCACCGGTAAAGAGCTGGTGGCCCGCGCCCTGCACAACCTGTCTCGCCGGGCCAAGGCACCGATGATCTCGGTGAACTGCGCGGCCATCCCCGAAACGCTGATCGAATCCGAACTGTTCGGCCACGAAAAAg                                                   >  1:138642/1‑149 (MQ=255)                                                                                                    gATCCAGGGCGAGTCGGGCACCGGTAAAGAGCTGGTGGCCCGCGCCCTGCACAACCTGTCTCGCCGGGCCAAGGCACCGATGATCTCGGTGAACTGCGCGGCCATCCCCGAAACGCTGATCGAATCCGAACTGTTCGGCCACGAAAAAg                                                   >  8:147959/1‑149 (MQ=255)                                                                                                     aTCCAGGGCGAGTCGGGCACCGGTAAAGAGCTGGTGGCCCGCGCCCTGCACAACCTGTCTCGCCGGGCCAAGGCACCGATGATCTCGGTGAACTGCGCGGCCATCCCCGAAACGCTGATCGAATCCGAACTGTTCGGCCACGaaaaa                                                    <  3:289423/147‑1 (MQ=255)                                                                                                      tCCAGGGCGAGTCGGGCACCGGTAAAGAGCTGGTGGCCCGCGCCCTGCACAACCTGTCTCGCCGGGCCAAGGCACCGATGATCTCGGTGAACTGCGCGGCCATCCCCGAAACGCTGATCGAATCCGAACTGTTCGGCCACGAAAAAGgc                                                 <  5:319220/149‑1 (MQ=255)                                                                                                       gcagggcgcgggccaccagctctttaccggtgcccgactcgccctgCACAACCTGTCTCGCCGGGCCAAGGCACCGATGATCTCGGTGAACTGCGCGGCCATCCCCGAAACGCTGATCGAATCCGAACTGTTCGGCCACGAAAAAGgcg                                                >  2:176593‑M2/47‑149 (MQ=255)                                                                                                       ccAGGGCGAGTCGGGCACCGGTAAAGAGCTGGTGGCCCGCGCCCTGCACAACCTGTCTCGCCGGGCCAAGGCACCGATGATCTCGGTGAACTGCGCGGCCATCCCCGAAACGCTGATCGAATCCGAACTGTTCGGCCACGAAAAAGgcg                                                >  2:174038/1‑149 (MQ=255)                                                                                                        cagggcgcgggccaccagctctttaccggtgcccgactcgccctgCACAACCTGTCTCGCCGGGCCAAGGCACCGATGATCTCGGTGAACTGCGCGGCCATCCCCGAAACGCTGATCGAATCCGAACTGTTCGGCCACGAAAAAGgcgc                                               >  2:79324‑M2/46‑149 (MQ=255)                                                                                                         AGGGCGAGTCGGGCACCGGTAAAGAGCTGGTGGCCCGCGCCCTGCACAACCTGTCTCGCCGGGCCAAGGCACCGATGATCTCGGTGAACTGCGCGGCCATCCCCGAAACGCTGATCGAATCCGAACTGTTCGGCCACGAAAAAGGcgcg                                              <  3:326471‑M1/149‑1 (MQ=255)                                                                                                           GGCGAGTCGGGCACCGGTAAAGAGCTGGTGGCCCGCGCCCTGCACAACCTGTCTCGCCGGGCCAAGGCACCGATGATCTCGGTGAACTGCGCGGCCATCCCCGAAACGCTGATCGAATCCGAACTGTTCGGcc                                                            <  8:32249‑M1/133‑1 (MQ=255)                                                                                                            GCGAGTCGGACACCGGTAAAGAGCTGGTGGCCCGCGCCCTGCACAACCTGTCTCGCCGGGCCAAGGCACCGATGATCTCGGTGAACTGCGCGGCCATCCCCGAAACGCTGATCGAATCCGAACTGTTCGGCCACGAAAAAGGCGCGTTc                                           >  3:123165‑M1/1‑149 (MQ=255)                                                                                                                gTCGTGCAGCGGTAAAGAGCTTGTTGCCCGCGCACTGCACAACCTGTCTCGCCGTGCCAAGGCACCTATGATCTCGGTGAACTGCGCGGCCATCCCCGAAACGCTGATCGAATCCGAACTGTTCGGCCACGAAAAAGGCGCGTTCAc                                         <  7:48780/147‑1 (MQ=38)                                                                                                                   gggCACCGGTAAAGAGCTGGTGGCCCGCGCCCTGCACAACCTGTCTCGCCGGGCCAAGGCACCGATGATCTCGGTGAACTGCGCGGCCATCCCCGAAACGCTGATCGAATCCGAACTGTTCGGCCACGAAAAAGGCGCGTTCACCGgc                                     <  1:250111/148‑1 (MQ=255)                                                                                                                   gggCACCGGTAAAGAGCTGGTGGCCCGCGCCCTGCACAACCTGTCTCGCCGGGCCAAGGCACCGATGATCTCGGTGAACTGCGCGGCCATCACCGAAACCCTGATCGAATCCGAACTGTTCGGCAACGAAAAAGGCGCGTTCACCGgcg                                    >  6:366527/1‑149 (MQ=255)                                                                                                                        ccGGTAAAGAGCTGGTGGCCCGCGCCCTGCACAACCTGTCTCGCCGGGCCAAGGCACCGATGATCTCGGTGAACTGCGCGGCCATCCCCGAAACGCTGATCGAATCCGAACTGTTCGGCCACGAAAAAGGCGCGTTCACCGGCGCCAgc                               <  7:110477/149‑1 (MQ=255)                                                                                                                          ggTAAAGAGCTGGTGGCCCGCGCCCTGCACAACCTGTCTCGCCGGGCCAAGGCACCGATGATCTCGGTGAACTGCGCGGCCATCCCCGAAACGCTGATCGAATCCGAACTGTTCGGCCACGAAAAAGGCGCGTTCACCGGCGCCAgcgc                             <  6:88824/149‑1 (MQ=255)                                                                                                                           gTAAAGAGCTGGTGGCCCGCGCCCTGCACAACCTGTCTCGCCGGGCCAAGGCACCGATGATCTCGGTGAACTGCGCGGCCATCCCCGAAACGCTGATCGAATCCGAACTGTTCGGCCACGAAAAAGGCGCGTTCACCGGCGCCAGCGcc                            >  2:95260/1‑149 (MQ=255)                                                                                                                              aaGAGCTGGTGGCCCGCGCCCTGCACAACCTGTCTCGCCGGGCCAAGGCACCGATGATCTCGGTGAACTGCGCGGCCATCCCCGAAACGCTGATCGAATCCGAACTGTTCGGCCACGAAAAAGGCGCGTTCACCGGCGCCAGCGCCggg                         <  1:174038/149‑1 (MQ=255)                                                                                                                                  cggtgcccgactcgccctgCACAACCTGTCTCGCCGGGCCAAGGCACCGATGATCTCGGTGAACTGCGCGGCCATCCCCGAAACGCTGATCGAATCCGAACTGTTCGGCCACGAAAAAGGCGCGTTCACCGGCGCCAGCGCCGGgcgcg                     <  1:176593‑M2/130‑1 (MQ=255)                                                                                                                                   cTGGTGGCCCGCGCCCTGCACAACCTGTCTCGCCGGGCCAAGGCACCGATGATCTCGGTGAACTGCGCGGCCATCCCCGAAACGCTGATCGAATCCGAACTGTTCGGCCACGAAAAAGGCGCGTTCACCGGCGCCAGCGCCGGgcgcgc                    <  6:69724/149‑1 (MQ=255)                                                                                                                                     ggtggCCCGCGCCCTGCACAACCTGTCTCGCCGGGCCAAGGCACCGATGATCTCGGTGAACTGCGCGGCCATCCCCGAAACGCTGATCGAATCCGAACTGTTCGGCCACGAAAAAGgcgc                                               <  7:239403/120‑1 (MQ=255)                                                                                                                                     ggtggCCCGCGCCCTGCACAACCTGTCTCGCCGGGCCAAGGCACCGATGATCTCGGTGAACTGCGCGGCCATCCCCGAAACGCTGATCGAATCCGAACTGTTCGGCCACGAAAAAGgcgc                                               >  8:239403/1‑120 (MQ=255)                                                                                                                                     ggtggCCCGCGCCCTGCACAACCTGTCTCGCCGGGCCAAGGCACCGATGATCTCGGTGAACTGCGCGGCCATCCCCGAAACGCTGATCGAATCCGAACTGTTCGGCCACGAAAAAGGCGCGTTCACCGGCGCCAGCGCCGGGCGCGCCg                  >  3:187657/1‑149 (MQ=255)                                                                                                                                      gtggCCCGCGCCCTGCACAACCTGTCTCGCCGGGCCAAGGCACCGATGATCTCGGTGAACTGCGCGGCCATCCCCGAAACGCTGATCGAATCCGAACTGTTCg                                                               >  1:26831/1‑103 (MQ=255)                                                                                                                                      gtggCCCGCGCCCTGCACAACCTGTCTCGCCGGGCCAAGGCACCGATGATCTCGGTGAACTGCGCGGCCATCCCCGAAACGCTGATCGAATCCGAACTGTTCg                                                               <  2:26831/103‑1 (MQ=255)                                                                                                                                       cccgactcgccctgCACAACCTGTCTCGCCGGGCCAAGGCACCGATGATCTCGGTGAACTGCGCGGCCATCCCCGAAACGCTGATCGAATCCGAACTGTTCGGTCACGAAAAAGGCGCGTTCACCGGCGCCAGCGCCGGGCGCGCCgg                 <  1:79324‑M2/134‑1 (MQ=255)                                                                                                                                         gCCCGCGCCCTGCACAACCTGTCTCGCCGGGCCAAGGCACCGATGATCTCGGTGAACTGCGCGGCCATCCCCGAAACGCTGATCGAATCCGAACTGTTCGGCCACGAAAAAGGCGCGTTCACCGGCGCCAGCGCCGGGCGCGCCGGCtt              >  6:204909/1‑149 (MQ=255)                                                                                                                                          cccGCGCCCTGCACAACCTGTCTCGCCGGGCCAAGGCACCGATGATCTCGGTGAACTGCGCGGCCATCCCCGAAACGCTGATCGAATCCGAACTGTTCGGCCACGAAAAAGGCGCGTTCACCGGCGCCAGCGCCGGGCGCGCCGGCTtg             <  1:212991/149‑1 (MQ=255)                                                                                                                                              cgccctgCACAACCTGTCTCGCCGGGCCAAGGCACCGATGATCTCGGTGAACTGCGCGGCCATCCCCGAAACGCTGATCGAATCCGAACTGTTCGGCCACGAAAAAGGCGCGTTCACCGGCGCCAGCGCCGGGCGCGCCGGCTtggtgg         <  5:204909‑M2/142‑1 (MQ=255)                                                                                                                                               gccctgCACAACCTGTCTCGCCGGGCCAAGGCACCGATGATCTCGGTGAACTGCGCGGCCATCCCCGAAACGCTGATCGAATCCGAACTGTTCGGCCACGAAAAAGGCGCGTTCACCGGCGCCAGCGCCGGGCGCGCCGGCTTGGTGGa        <  4:187657‑M2/143‑1 (MQ=255)                                                                                                                                                ccctgCACAACCTGTCTCGCCGGGCCAAGGCACCGATGATCTCGGTGAACTGCGCGGCCATCCCCGAAACGCTGATCGAATCCGAACTGTTCGGCCACGAAAAAGGCGCGTTCACCGGCGCCAGCGCCGGGCGCGCCGGCTTGGTGGAg       >  7:305351‑M2/6‑149 (MQ=255)                                                                                                                                                ccctgCACAACCTGTCTCGCCGGGCCAAGGCACCGATGATCTCGGTGAACTGCGCGGCCATCCCCGAAACGCTGATCGAATCCGAACTGTTCGGCCACGAAAAAGGCGCGTTCACCGGCGCCAGCGCCGGGCGCGCCGGCTTGGTGGAg       >  5:168566‑M2/6‑149 (MQ=255)                                                                                                                                                 cctgCACAACCTGTCTCGCCGGGCCAAGGCACCGATGATCACGGTGAACTGCGCGGCCATCCCCGAAACGCTGATCGAATCCGAACTGTTCGGCCACGAAAAAGGCGCGTTCACCGGCGCCAGCGCCGGGCGCGCCGGCTTGGTGGAgg      >  8:254512‑M2/5‑149 (MQ=255)                                                                                                                                                     cacaACCTGTCTCGCCGGGCCAAGGCACCGATGATCTCGGTGAACTGCGCGGCCATCCCCGAAACGCTGATCGAATCCGAACTGTTCGGCCACGAAAAAGGCGCGTTCACCGGCGCCAGCGCCGGGCGCGCCGGCTTGGTGGAGgccgc  <  7:326455/149‑1 (MQ=255)                                                                                                                                                     cacaACCTGTCTCGCCGGGCCAAGGCACCGATGATCTCGGTGAACTGCGCGGCCATCCCCGAAACGCTGATCGAATCCGAACTGTTCGGCCACGAAAAAGGCGCGTTCACCGGCGCCAGCGCCGGGCGCGCCGGCTTGGTGGAGgccgc  >  7:197295/1‑149 (MQ=255)                                                                                                                                                     cacaACCTGTCTCGCCGGGCCAAGGCACCGATGATCTCGGTGAACTGCGCGGCCATCCCCGAAACGCTGATCGAATCCGAACTGTTCGGCCACGAAAAAGGCGCGTTCACCGGCGCCAGCGCCGGGCGCGCCGGCTTGGTGGAGgccgc  <  4:326471/149‑1 (MQ=255)                                                                                                                                                     cacaACCTGTCTCGCCGGGCCAAGGCACCGATGATCTCGGTGAACTGCGCGGCCATCCCCGAAACGCTGATCGAATCCGAACTGTTCGGCCACGAAAAAGGCGCGTTCACCGGCGCCAGCGCCGGGCGCGCCGGCTTGGTGGAGgcc    <  7:98564/147‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                     AACGGCCAATGGCGAGATCGGCATCATCGGCTCGTGCCAGCCCATGCAGGACATGTACAGCAAGATCCGCAAGGTCGCGCCTACCGACTCCAATGTGCTGATCCAGGGCGAGTCGGGCACCGGTAAAGAGCTGGTGGCCCGCGCCCTGCACAACCTGTCTCGCCGGGCCAAGGCACCGATGATCTCGGTGAACTGCGCGGCCATCCCCGAAACGCTGATCGAATCCGAACTGTTCGGCCACGAAAAAGGCGCGTTCACCGGCGCCAGCGCCGGGCGCGCCGGCTTGGTGGAGGCCGC  >  NC_002947/5336982‑5337278

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.