BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5337341	80 (1.330)	8 (0.140)	7/250	NT	10.3%	coding (791/1443 nt)	PP_4696	nitrogen regulation protein NR(I)
*	?	NC_002947	= 5337359	63 (1.100)	8 (0.140)	7/250	NT	10.3%	coding (809/1443 nt)	PP_4696	nitrogen regulation protein NR(I)

Only 100 of 110 total aligned reads displayed.

GCTGATCGAATCCGAACTGTTCGGCCACGAAAAAGGCGCGTTCACCGGCGCCAGCGCCGGGCGCGCCGGCTTGGTGGAGGCCGCCGATGGCGGTACGCTGTTCCTCGATGAAATTGGCGAACTGCCGCTCGAAGCCCAGGCTCGCCTGCTGCGTGTGCTGCAGGAAGGCGAGATACGCCGGGTAGGTTCGGTGCAGTCGC‑AAAAGGTCGATGTGCGCCTGATCGCCGCGACCCACCGCGACCTGAAAAACCTGGCCAAGGCCGGCCAGTTCCGTGAAGACTTGTATTACCGACT  >  NC_002947/5337195‑5337488

gCTGATCGAATCCGAACTGTTCGGCCACGAAAAAGGCGCGTTCACCGGCGCCAGCGCCGGGCGCGCCGGCTTGGTGGAGGCCGCCGATGGCGGTACGCTGTTCCTCGATGAAATTGGCGAACTGCCGCTCGAAGCCCAGGCTCGCctgc                                                                                                                                                    >  2:39769/1‑149 (MQ=255)

gCTGATCGAATCCGAACTGTTCGGCCACGAAAAAGGCGCGTTCACCGGCGCCAGCGCCGGGCGCGCCGGCTTGGTGGAGGCCGCCGATGGCGGTACGCTGTTCCTCGATGAAATTGGCGAACTGCCGCTCGAAGCCCAGGCTCGCctgc                                                                                                                                                    <  6:277040/149‑1 (MQ=255)

  tGATCGAATCCGAACTGTTCGGCCACGAAAAAGGCGCGTTCACCGGCGCCAGCGCCGGGCGCGCCGGCTTGGTGGAGGCCGCCGATGGCGGTACGCTGTTCCTCGATGAAATTGGCGAACTGCCGCTCGAAGCCCAGGCTCGCctgctg                                                                                                                                                  >  4:262454/1‑149 (MQ=255)

   gATCGAATCCGAACTGTTCGGCCACGAAAAAGGCGCGTTCACCGGCGCCAGCGCCGGGCGCGCCGGCTTGGTGGAGGCCGCCGATGGCGGTACGCTGTTCCTCGATGAAATTGGCGAACTGCCGCTCGAAGCCCAGGCTCGCCtgctgc                                                                                                                                                 >  7:157495/1‑149 (MQ=255)

     tCGAATCCGAACTGTTCGGCCACGAAAAAGGCGCGTTCACCGGCGCCAGCGCCGGGCGCGCCGGCTTGGTGGAGGCCGCCGATGGCGGTACGCTGTTCCTCGATGAAATTGGCGAACTGCCGCTCGAAGCCCAGGCTCGCCTGCTGCgt                                                                                                                                               <  1:39769/149‑1 (MQ=255)

       gAATCCGAACTGTTCGGCCACGAAAAAGGCGCGTTCACCGGCGCCAGCGCCGGGCGCGCCGGCTTGGTGGAGGCCGCCGATGGCGGTACGCTGTTCCTCGATGAAATTGGCGAACTGCCGCTCGAAGCCCAGGCGCGCCTGCTGCgtgt                                                                                                                                             <  3:362554/149‑1 (MQ=255)

        aaTCCGAACTGTTCGGCCACGAAAAAGGCGCGTTCACCGGCGCCAGCGCCGGGCGCGCCGGCTTGGTGGAGGCCGCCGATGGCGGTACGCTGTTCCTCGATGAAATTGGCGAACTGCCGCTCGAAGCCCAGGCTCGCCTGCTGCGtgtg                                                                                                                                            >  2:262535/1‑149 (MQ=255)

        aaTCCGAACTGTTCGGCCACGAAAAAGGCGCGTTCACCGGCGCCAGCGCCGGGCGCGCCGGCTTGGTGGAGGCCGCCGATGGCGGTACGCTGTTCCTCGATGAAATTGGCGAACTGCCGCTCGAAGCCCAGGCTCGCCTGCTGCGtgtg                                                                                                                                            >  3:262619/1‑149 (MQ=255)

         aTCCGAACTGTTCGGCCACGAAAAAGGCGCGTTCACCGGCGCCAGCGCCGGGCGCGCCGGCTTGGTGGAGGCCGCCGATGGCGGTACGCTGTTCCTCGATGAAATTGGCGAACTGCCGCTCGAAGCCCAGGTTCGCCTGCTGCGTGtgc                                                                                                                                           >  2:99977/1‑149 (MQ=255)

         aTCCGAACTGTTCGGCCACGAAAAAGGCGCGTTCACCGGCGCCAGCGCCGGGCGCGCCGGCTTGGTGGAGGCCGCCGATGGCGGTACGCTGTTCCTCGATGAAATTGGCGAACTGCCGCTCGAAGCCCAGGCTCGCCTGCTGCGTGtgc                                                                                                                                           >  2:99897/1‑149 (MQ=255)

         aTCCGAACTGTTCGGCCACGAAAAAGGCGCGTTCACCGGCGCCAGCGCCGGGCGCGCCGGCTTGGTGGAGGCCGCCGATGGCGGTACGCTGTTCCTCGATGAAATTGGCGAACTGCCGCTCGAAGCCCAGGCTCGCCTGCTGCGTGtgc                                                                                                                                           <  6:348387/149‑1 (MQ=255)

           ccGAACTGTTCGGCCACGAAAAAGGCGCGTTCACCGGCGCCAGCGCCGGGCGCGCCGGCTTGGTGGAGGCCGCCGATGGCGGTACGCTGTTCCTCGATGAAATTGGCGAACTGCCGCTCGAAGCCCAGGCTCGCCTGCTGCGTGtgct                                                                                                                                          >  5:227330/1‑148 (MQ=255)

            cGAACTGTTCGGCCACGAAAAAGGCGCGTTCACCGGCGCCAGCGCCGGGCGCGCCGGCTTGGTGGAGGCCGCCGATGGCGGTACGCTGTTCCTCGATGAAATTGGCGAACTGCCGCTCGAAGCCCAGGCTCGCCTGCTGCGTGtgctgc                                                                                                                                        <  8:197295/149‑1 (MQ=255)

            cGAACTGTTCGGCCACGAAAAAGGCGCGTTCACCGGCGCCAGCGCCGGGCGCGCCGGCTAGGTGGAGGCCGCCGATGGCGGTAAGCTGTTCCTCGATGAAATTGGCGAACTGCCGCTCGAAGCCCAGGCTCGCCTGCTGCGTGtgctg                                                                                                                                         >  7:229904/1‑148 (MQ=255)

             gAACTGTTCGGCCACGAAAAAGGCGCGTTCACCGGCGCCAGCGCCGGGCGCGCCGGCTTGGTGGAGGCCGCCGATGGCGGTACGCTGTTCCTCGATGAAATTGGCGAACTGCCGCTCGAAGCCCAGGCTCGCCTGCTGCGTGtgctg                                                                                                                                         >  2:340078/1‑147 (MQ=255)

             gAACTGTTCGGCCACGAAAAAGGCGCGTTCACCGGCGCCAGCGCCGGGCGCGCCGGCTTGGTGGAGGCCGCCGATGGCGGTACGCTGTTCCTCGATGAAATTGGCGAACTGCCGCTCGAAGCCCAGGCTCGCCTGCTGCGTGtgctg                                                                                                                                         >  8:236594/1‑147 (MQ=255)

             gAACTGTTCGGCCACGAAAAAGGCGCGTTCACCGGCGCCAGCGCCGGGCGCGCCGGCTTGGTGGAGGCCGCCGATGGCGGTACGCTGTTCCTCGATGAAATTGGCGAACTGCCGCTCGAAGCCCAGGCTCGCCTGCTGCGTGTGCTGCa                                                                                                                                       <  5:51531/149‑1 (MQ=255)

              aaCTGTTCGGCCACGAAAAAGGCTCGTTCACCGGCGCCAGCGCCGGGCGCGCCGGCTTGGTGGAGGCCGCCCATGGAGGTACGCTGATCCTCGATCAAATACGCGAACTGCCGCTCGAACCCCAGGCTCGCCTGCTGCGTGTGATGCAg                                                                                                                                      >  4:30361/1‑149 (MQ=255)

               aCTGTTCGGCCACGAAAAAGGCGCGTTCACCGGCGCCAGCGCCGGGCGCGCCGGCTTGGTGGAGGCCGCCGATGGCGGTACGCTGTTCCTCGATGAAATTGGCGAACTGCCGCTCGAAGCCCAGGCTCGCCTGCTGCGTGTGCTGCAgg                                                                                                                                     <  7:147959/149‑1 (MQ=255)

                 tGTTCGGCCACGAAAAAGGCGCGTTCACCGGCGCCAGCGCCGGGCGCGCCGGCTTGGTGGAGGCCGCCGATGGCGGTACGCTGTTCCTCGATGAAATTGGCGAACTGCCGCTCGAAGCCCAGGCTCGCCTGCTGCGTGTGCTGCAGGAa                                                                                                                                   <  8:337034‑M2/149‑2 (MQ=255)

                   ttCGGCCACGAAAAAGGCGCGTTCACCGGCGCCAGCGCCGGGCGCGCCGGCTTGGTGGAGGCCGCCGATGGCGGTACGCTGTTCCTCGATGAAATTGGCGAACTGCCGCTCGAAGCCCAGGCTCGCCTGCTGCGTGTGCTGCAGGAagg                                                                                                                                 <  6:243194‑M2/149‑4 (MQ=255)

                   ttCGGCCACGAAAAAGGCGCGTTCACCGGCGCCAGCGCCGGGCGCGCCGGCTTGGTGGAGGCCGCCGATGGCGGTACGCTGTTCCTCGATGAAATTGGCGAACTGCCGCTCGAAGCCCAGGCTCGCCTGCTGCGTGTGCTGCAGGAagg                                                                                                                                 >  3:202344‑M2/1‑146 (MQ=255)

                   ttCGGCCACGAAAAAGGCGCGTTCACCGGCGCCAGCGCCGGGCGCGCCGGCTTGGTGGAGGCCGCCGATGGCGGTACGCTGTTCCTCGATGAAATTGGCGAACTGCCGCTCGAAGCCCAGGCTCGCCTGCTGCGTGTGCTGCAGGAa                                                                                                                                   >  7:337034‑M2/1‑146 (MQ=255)

                     cGGCCACGAAAAAGGCGCGTTCACCGGCGCCAGCGCCGGGCGCGCCGGCTTGGTGGAGGCCGCCGATGGCGGTACGCTGTTCCTCGATGAAATTGGCGAACTGCCGCTCGAAGCCCAGGTTCGCCTGCTGCGTGTGCTGCAGGAaggc                                                                                                                                >  1:99977‑M2/1‑144 (MQ=255)

                     cGGCCACGAAAAAGGCGCGTTCACCGGCGCCAGCGCCGGGCGCGCCGGCTTGGTGGAGGCCGCCGATGGCGGTACGCTGTTCCTCGATGAAATTGGCGAACTGCCGCTCGAAGCCCAGGCTCGCCTtcctgcagcacacgcagcaggc                                                                                                                                <  2:367440‑M1/148‑23 (MQ=255)

                     cGGCCACGAAAAAGGCGCGTTCACCGGCGCCAGCGCCGGGCGCGCCGGCTTGGTGGAGGCCGCCGATGGCGGTACGCTGTTCCTCGATGAAATTGGCGAACTGCCGCTCGAAGCCCAGGCTCGCCTtcctgcagcacacgcagcaggc                                                                                                                                <  2:373230‑M1/148‑23 (MQ=255)

                      ggCCACGAAAAAGGCGCGTTCACCGGCGCCAGCGCCGGGCGCGCCGGCTTGGTGGAGGCCGCCGATGGCGGTACGCTGTTCCTCGATGAAATTGGCGAACTGCCGCTCGAAGCCCAGGCTCGCCTtcctgcagcacacgcagcaggcga                                                                                                                              <  3:123318‑M1/149‑25 (MQ=255)

                        ccACGAAAAAGGCGCGTTCACCGGCGCCAGCGCCGGGCGCGCCGGCTTGGTGGAGGCCGCCGATGGCGGTACGCTGTTCCTCGATGAAATTGGCGAACTGCCGCTCGAAGCCCAGGCTCGCCTGCTGCGTGTGCTGCAGGAAGGCgaga                                                                                                                            <  5:366527/149‑1 (MQ=255)

                         cACGAAAAAGGCGCGTTCACCGGCGCCAGCGCCGGGCGCGCCGGCTTGGTGGAGGCCGCCGATGGCGGTACGCTGTTCCTCGATGAAATTGGCGAACTGCCGCTCGAAGCCCAGGCTCGCCTGCTGCgtgt                                                                                                                                             >  4:135592/1‑131 (MQ=255)

                         cACGAAAAAGGCGCGTTCACCGGCGCCAGCGCCGGGCGCGCCGGCTTGGTGGAGGCCGCCGATGGCGGTACGCTGTTCCTCGATGAAATTGGCGAACTGCCGCTCGAAGCCCAGGCTCGCCTGCTGCgtgt                                                                                                                                             <  3:135592/131‑1 (MQ=255)

                         cACGAAAAAGGCGCGTTCACCGGCGCCAGCGCCGGGCGCGCCGGCTTGGTGGAGGCCGCCGATGGCGGTACGCTGTTCCTCGATGAAATTGGCGAACTGCCGCTCGAAGCCCAGGCTCGCCTGCTGCGTGTGCTGCAGGAAGGCGAGAt                                                                                                                           <  1:319415/149‑1 (MQ=255)

                         cACGAAAAAGGCGCGTTCACCGGCGCCAGCGCCGGGCGCGCCGGCTTGGTGGAGGCCGCCGATGGCGGTACGCTGTTCCTCGATGAAATTGGCGAACTGCCGCTCGAAGCCCAGGCTCGCCTGCTGCGTGTGCTGCAGGAAGGCGAGAt                                                                                                                           <  8:103554/149‑1 (MQ=255)

                          aCGAAAAAGGCGCGTTCACCGGCGCCAGCGCCGGGCGCGCCGGCTTGGTGGAGGCCGCCGATGGCGGTACGCTGTTCCTCGATGAAATTGGCGAACTGCCGCTCGAAGCCCAGGCTCGCCTGCTGCGTGTGCTGCAGGAAGGCGAGATa                                                                                                                          >  7:154728/1‑149 (MQ=255)

                          aCGAAAAAGCCGCGAAAAACCCCGCCAGCGCCGGGCCACACGGAATGCAGGAGGCCGCAGAACGCCGAACTCAGAACCTCGATGAAATTGGCGAACTGCCGCACCAACCACAAGCTCGCCTGCTGCGTCTGCTGCAGGAAGAAGAGATa                                                                                                                          >  6:352235/1‑149 (MQ=255)

                            gAAAAAGGCGCGTTCACCGGCGCCAGCGCCGGGCGCGCCGGCTTGGTGGAGGCCGCCGATGGCGGTACGCTGTTCCTCGATGAAATTGGCGAACTGCCGCTCGAAGCCCAGGCTCGCCTtcctgcagcacacgcagcaggcgagcctgg                                                                                                                        <  4:67304‑M1/149‑31 (MQ=255)

                            gAAAAAGGCGCGTTCACCGGCGCCAGCGCCGGGCGCGCCGGCTTGGTGGAGGCCGCCGATGGCGGTACGCTGTTCCTCGATGAAATTGGCGAACTGCCGCTCGAAGCCCAGGCTCGCCTGCTGCGTGTGCTGCAGGAAGGCGAGATACg                                                                                                                        >  7:204571/1‑149 (MQ=255)

                               aaaGGCGCGTTCACCGGCGCCAGCGCCGGGCGCGCCGGCTTGGTGGAGGCCGCCGATGGCGGTACGCTGTTCCTCGATGAAATTGGCGAACTGCCGCTCGAAGCCCAGGCTCGCCTGCTGCGTGTGCTGCAGGAAGGCGAGATACGCCg                                                                                                                     <  7:48728/149‑1 (MQ=255)

                                     gcgTTCACCGGCGCCAGCGCCGGGCGCGCCGGCTTGGTGGAGGCCGCCGATGGCGGTACGCTGTTCCTCGATGAAATTGGCGAACTGCCGCTCGAAGCCCAGGCTCGCCTGCTGCGTGTGCTGCAGGAAGGCGAGATACGCCGGGTAgg                                                                                                               <  8:204571/149‑1 (MQ=255)

                                       gTTCACCGGCGCCAGCGCCGGGCGCGCCGGCTTGGTGGAGGCCGCCGATGGCGGTACGCTGTTCCTCGATGAAATTGGCGAACTGCCGCTCGAAGCCCAGGCTCGCCTGCTGCGTGTGCTGCAGGAAGGCGAGATACGCCGGGTAGGtt                                                                                                             <  6:227330/149‑1 (MQ=255)

                                           aCCGGCGCCAGCGCCGGGCGCGCCGGCTTGGTGGAGGCCGCCGATGGCGGTACGCTGTTCCTCGATGAAATTGGCGAACTGCCGCTCGAAGCCCAGGCTCGCCTGCTGCGTGTGCTGCAGGAAGGCGAGATACGCCGGGTAGGTTCGGt                                                                                                         <  6:216924/149‑1 (MQ=255)

                                           aCCGGCGCCAGCGCCGGGCGCGCCGGCTTGGTGGAGGCCGCCGATGGCGGTACGCTGTTCCTCGATGAAATTGGCGAACTGCCGCTCGAAGCCCAGGCTCGCCTGCTGCGTGTGCTGCAGGAAGGCGAGATACGCCGGGTAGGTTCGGt                                                                                                         >  4:58655/1‑149 (MQ=255)

                                            ccGGCGCCAGCGCCGGGCGCGCCGGCTTGGTGGAGGCCGCCGATGGCGGTACGCTGTTCCTCGATGAAATTGGCGAACTGCCGCTCGAAGCCCAGGCTCGCCTtcctgcagcacacgcagcaggcgagcctg                                                                                                                         >  1:257000‑M1/1‑103 (MQ=255)

                                            ccGGCGCCAGCGCCGGGCGCGCCGGCTTGGTGGAGGCCGCCGATGGCGGTACGCTGTTCCTCGATGAAATTGGCGAACTGCCGCTCGAAGCCCAGGCTCGCCTtcctgcagcacacgcagcaggcgagcctg                                                                                                                         <  2:257000‑M1/132‑30 (MQ=255)

                                            ccGGCGCCAGCGCCGGGCGCGCCGGCTTGGTGGAGGCCGCCGATGGCGGTACGCTGTTCCTCGATGAAATTGGCGAACTGCCGCTCGAAGCCCAGGCTCGCCTGCTGCGTGTGCTGCAGGAAGGCGAGATACGCCGGGTAGGTTCGGTg                                                                                                        <  8:305351/149‑1 (MQ=255)

                                                 gcCAGCGCCGGGCGCGCCGGCTTGGTGGAGGCCGCCGATGGCGGTACGCTGTTCCTCGATGAAATTGGCGAACTGCCGCTCGAAGCCCAGGCTCGCCTGCTGCGTGTGCTGCAGGAAGGCGAGATACGCCGGGTAGGTTCGGTGCAGTc                                                                                                   <  7:236594/149‑1 (MQ=255)

                                                 gcCAGCGCCGGGCGCGCCGGCTTGGTGGAGGCCGCCGATGGCGGTACGCTGTTCCTCGATGAAATTGGCGAACTGCCGCTCGAAGCCCAGGCTCGCCTGCTGCGTGTGCTGCAGGAAGGCGAGATACGCCGGGTAGGTTCGGTGCAGTc                                                                                                   <  7:66743/149‑1 (MQ=255)

                                                    aGCGCCGGGCGCGCCGGCTTGGTGGAGGCCGCCGATGGCGGTACGCTGTTCCTCGATGAAATTGGCGAACTGCCGCTCGAAGCCCAGGCTCGCCTGCTGCGTGTGCTGCAGGAAGGCGAGATACGCCGGGTAGGTTCGGTGCAGTCGc                                                                                                 >  8:218444/1‑148 (MQ=255)

                                                    aGCGCCGGGCGCGCCGGCTTGGTGGAGGCCGCCGATGGCGGTACGCTGTTCCTCGATGAAATTGGCGAACTGCCGCTCGAAGCCCAGGCTCGCCTGCTGCGTGTGCTGCAGGAAGGCGAGATACGCCGGGTAGGTTCGGTGCAGTCGc                                                                                                 >  2:37915/1‑148 (MQ=255)

                                                       gcCGGGCGCGCCGGCTTGGTGGAGGCCGCCGATGGCGGTACGCTGTTCCTCGATGAAATTGGCGAACTGCCGCTCGAAGCCCAGGCTCGCCTGCTGCGTGTGCTGCAGGAAGGCGAGATACGCCGGGTAGGTTCGGTGCAGTCGC‑aa                                                                                              >  3:247821/1‑147 (MQ=255)

                                                       gcCGGGCGCGCCGGCTTGGTGGAGGCCGCCGATGGCGGTACGCTGTTCCTCGATGAAATTGGCGAACTGCCGCTCGAAGCCCAGGCTCG‑‑ctgcagcacacgcagcaggcgagcc                                                                                                                              <  2:55344‑M1/115‑26 (MQ=255)

                                                        ccGGGCGCGCCGGCTTGGTGGAGGCCGCCGATGGCGGTACGCTGTTCCTCGATGAAATTGGCGAACTGCCGCTCGAAGCCCAGGCTCGCCTGCTGCGTGTGCTGCAGGAAGGCGAGATACGCCGGGTAGGTTCGGTGCAGTCGC‑AAAAg                                                                                           <  6:68756/149‑1 (MQ=255)

                                                          gggCGCGCCGGCTTGGTGGAGGCCGCCGATGGCGGTACGCTGTTCCTCGATGAAATTGGCGAACTGCCGCTCGAAGCCCAGGCTCGCCTGCTGCGTGTGCTGCAGGAAGGCGAGATACGCCGGGTAGGTTCGGTg                                                                                                        <  6:48873/135‑1 (MQ=255)

                                                          gggCGCGCCGGCTTGGTGGAGGCCGCCGATGGCGGTACGCTGTTCCTCGATGAAATTGGCGAACTGCCGCTCGAAGCCCAGGCTCGCCTGCTGCGTGTGCTGCAGGAAGGCGAGATACGCCGGGTAGGTTCGGTg                                                                                                        >  5:48873/1‑135 (MQ=255)

                                                            gcgcgcCGGCTTGGTGGAGGCCGCCGATGGCGGTACGCTGTTCCTCGATGAAATTGGCGAACTGCCGCTCGAAGCCCAGGCTCGCCTGCTGCGTGTGCTGCAGGAAGGCGAGATACGCCGGGTAGGTTCGGTGCAGTCGC‑AAAAGGTCg                                                                                       <  3:262454/149‑1 (MQ=255)

                                                                  cGGCTTGGTGGAGGCCGCCGATGGCGGTACGCTGTTCCTCGATGAAATTGGCGAACTGCCGCTCGAAGCCCAGGCTCGCCTGCTGCGTGTGCTGCAGGAAGGCGAGATACGCCGGGTAGGTTCGGTGCAGTCGC‑AAAAGGTCGATGTgc                                                                                 >  5:260687/1‑149 (MQ=255)

                                                                      aaggtggAGGCCGCCGATGGCGGTACGCTGTTCCTCGATGAAATTGGCGAACTGCCTCTCTAAGCCCAGGCTCGCCACCTGCGTCTGCAGCAGGAAGGAGAAATAACCCGGGTAGGTTAGGTGCAGTCTC‑AAAAGGTCTATGTgctcat                                                                             >  4:47638/3‑145 (MQ=255)

                                                                         gtggAGGCCGCCGATGGCGGTACGCTGTTCCTCGATGAAATTGGCGAACTGCCGCTCGAAGCCCAGGCTCGCCTGCTGCGTGTGCTGCAGGAAGGCGAGATACGCCGGGTAGGTTCGGTGCAGTCGC‑AAAAGGTCGATGTGCGCCTGAt                                                                          >  2:202118/1‑149 (MQ=255)

                                                                             aGGCCGCCTATGGCGGTACGCTGTTCCTCGATGAAATTGGCCAACTGCCGCTCTAAGCCCAGGCTCGCCTGCTGGGTGTGCTGATGTAAGGCGTGATACGCCGGGTAGGTTCGGTGCAGTCGC‑AAAAGGTCGATGTGCGCCTGATcgcc                                                                      <  1:99897/149‑1 (MQ=255)

                                                                             aGGCCGCCGATGGCGGTTCGCTGTTCCTCGATGAAATTGGCTAACTGCAGATCGAATCGCAGGCTCTCCTGCTGCGTGTGCTGGAGGAAGGCGAGATACGCCGGGTAGGTTGGGTGCAGTAGC‑AAAAGGTCGATGTGCGCCTGATcgcc                                                                      <  5:352235/149‑1 (MQ=255)

                                                                               gccgccGATGGCGGTACGCTGTTCCTCGATGAAATTGGCGAACTGCCGCTCGAAGCCCAGGCTCGCCTGCTGCGTGTGCTGCAGGAAGGCGAGATACGCCGGGTAGGTTCGGTGCAGTCGC‑aa                                                                                              >  3:328598/1‑123 (MQ=255)

                                                                               gccgccGATGGCGGTACGCTGTTCCTCGATGAAATTGGCGAACTGCCGCTCGAAGCCCAGGCTCGCCTGCTGCGTGTGCTGCAGGAAGGCGAGATACGCCGGGTAGGTTCGGTGCAGTCGC‑aa                                                                                              <  4:328598/123‑1 (MQ=255)

                                                                                 cgccgATGGCGGTACGCTGTTCCTCGATGAAATTGGCGAACTGCCGCTCGAAGCCCAGGCTCGCCTGCTGCGTGTGCTGCAGGAAGGCGAGATACGCCGGGTAGGTTCGGTGCAGTCGC‑AAAAGGTCGATGTGCGCCTGATCGCCGCGa                                                                  <  5:243194/149‑1 (MQ=255)

                                                                                 cgccgATGGCGGTACGCTGTTCCTCGATGAAATTGGCGAACTGCCGCTCGAAGCCCAGGCTCGCCTGCTGCGTGTGCTGCAGGAAGGCGAGATACGCCGGGTAGGTTCGGTGCAGTCGC‑AAAAGGTCGATGTGCGCCTGATCGCCGCGa                                                                  >  3:122943/1‑149 (MQ=255)

                                                                                 cgccgATGGCGGTACGCTGTTCCTCGATGAAATTGGCGAACTGCCGCTCGAAGCCCAGGCTCGCCTGCTGCGTGTGCTGCAGGAAGGCGAGATACGCCGGGTAGGTTCGGTGCAGTCGC‑AAAAGGTCGATGTGCGCCTGATCGCCGCGa                                                                  <  2:82774/149‑1 (MQ=255)

                                                                                         gCGGTACGCTGTTCCTCGATGAAATTGGCGAACTGCCGCTCGAAGCCCAGGCTCGCCTGCTGCGTGTGCTGCAGGAAGGCGAGATACGCCGGGTAGGTTCGGTGCAGTCGC‑AAAAGGTCGATGTGCGCCTGATCGCCGCGACCCACcgc                                                          <  1:340078/149‑1 (MQ=255)

                                                                                          cGGTACGCTGTTCCTCGATGAAATTGGCGAACTGCCGCTCGAAGCCCAGGCTCGCCTGCTGCGTGTGCTGCAGGAAGGCGAGATACGCCGGGTAGGTTCGGTGCAGTCGC‑AAAAGGTCGATGTGCGCCTGATCGCCGCGACCCACcgcg                                                         <  6:168566/149‑1 (MQ=255)

                                                                                                gCTGTTCCTCGATGAAATTGGCGAACTGCCGCTCGAAGCCCAGGCTCGCCTGCTGCGTGTGCTGCAGGAAGGCGAGATACGCCGGGTAGGTTCGGTGCAGTCGC‑AAAAGGTCGATGTGCGCCTGATCGCCGCGACCCACCGCGACCTg                                                    >  2:242484/1‑148 (MQ=255)

                                                                                                 cTGTTCCTCGATGAAATTGGCGAACTGCCGCTCGAAGCCCAGGCTCGCCTGCTGCGTGTGCTGCAGGAAGGCGAGATACGCCGGGTAGGTTCGGTGCAGTCGCAAAAAGGTCGATGTGCGCCTGATCGCCGCGACCCACCGCGACCTGa                                                   <  1:262535/149‑1 (MQ=255)

                                                                                                       cTCGATGAAATTGGCGAACTGCCGCTCGAAGCCCAGGCTCGCCTGCTGCGTGTGCTGCAGGAAGGCGAGATACGCCGGGTAGGTTCGGTGCAGTCGC‑AAAAGGTCGATGTGCGCCTGATCGCCGCGACCCACCGCGACCTGAAAAACCt                                            >  2:135129/1‑149 (MQ=255)

                                                                                                        tCGATGAAATTGGCGAACTGCCGCTCGAAGCCCAGGCTCGCCTGCTGCGTGTGCTGCAGGAAGGCGAGATACGCCGGGTAGGTTCGGTGCAGTCGC‑AAAAGGTCGCTGTGCGCCTGATCGCCGCGACCCCCCGCGACCTGAAAAACCTg                                           >  2:359334/1‑149 (MQ=255)

                                                                                                          gatgatATTGGCGAACTGCCGGTCGTAGCCCAGGCTCGCCTGCTGCGTGTGCTGCAGGAAGGCGAGATACGCCGGGTAGGTTCGGTGCAGTCGC‑AAAAGGTCGATGTGCGCCTGATCGCCGCGACCCACCGCGACCTGAAAAACCTg                                           <  8:229904/147‑1 (MQ=255)

                                                                                                          gATGAAATTGGCGAACTGCCGCTCGAAGCCCAGGCTCGCCTGCTGCGTGTGCTGCAGGAAGGCGAGATACGCCGGGTAGGTTCGGTGCAGTCGC‑AAAAGGTCGATGTGCGCCTGATCGCCGCGACCCACCGCGACCTGAAAAACCTGGc                                         >  8:282677/1‑149 (MQ=255)

                                                                                                               aaTTGGCGAACTGCCGCTCGAAGCCCAGGCTCGCCTGCTGCGTGTGCTGCAGGAAGGCGAGATACGCCGGGTAGGTTCGGTGCAGTCGC‑AAAAGGTCGATGTGCGCCTGATCGCCGCGACCCACCGCGACCTGAAAAACCTGGCCAAgg                                    <  8:157495/149‑1 (MQ=255)

                                                                                                                   cgCGAACTGCCGCTCGAAGCCCAGGCTCGCCTGCTGCGTGTGCTGCAGGAAGGCGAGATACGCCGGGTAGGTTCGGTGCAGTCGC‑CAAAGGTCGATGTGCGCCTGATCGCCGCGACCCACCGCGACCTGAAAAACCTGGCCAAggccg                                 <  5:325696/147‑1 (MQ=255)

                                                                                                                      gAACTGCCGCTCGAAGCCCAGGCTCGCCTGCTGCGTGTGCTGCAGGAAGGCGAGATACGCCGGGTAGGTTCGGTGCAGTCGC‑AAAAGGTCGATGTGCGCCTGATCGCCGCGACCCACCGCGACCTGAAAAACCTGGCCAAGGCCGGCCa                             <  7:282677/149‑1 (MQ=255)

                                                                                                                       aaCTGCCGCTCGAAGCCCAGGCTCGCCTGCTGCGTGTGCTGCAGGAAGGCGAGATACGCCGGGTAGGTTCGGTGCAGTCGC‑AAAAGGTCGATGTGCGCCTGATCGCCGCGACCCACCGCGACCTGAAAAACCTGGCCAAGGCCGGCCAg                            >  1:149724/1‑149 (MQ=255)

                                                                                                                         cTGCCGCTCGAAGCCCAGGCTCGCCTGCTGCGTGTGCTGCAGGAAGGCGAGATACGCCGGGTAGGTTCGGTGCAGTCGC‑AAAAGGTCGATGTGCGCCTGATCGCCGCGACCCACCGCGACCTGAAAAACCTGGCCAAGGCCGGCCAGtt                          >  7:86041/1‑149 (MQ=255)

                                                                                                                            ccGCTCGAAGCCCAGGCTCGCCTGCTGCGTGTGCTGCAGGAAGGCGAGATACGCCGGGTAGGTTCGGTGCAGTCGC‑AAAAGGTCGATGTGCGCCTGATCGCCGCGACCCACCGCGACCTGAAAAACCTGGCCAAGGCCGGCCAGTTCCg                       <  3:30361/149‑1 (MQ=255)

                                                                                                                             cGCTCGAAGCCCAGGCTCGCCTGCTGCGTGTGCTGCAGGAAGGCGAGATACGCCGGGTAGGTTCGGTGCAGTCGC‑AAAAGGTCGATGTGCGCCTGATCGCCGCGACCCACCGCGACCTGAAAAACCTGGCCAAGGCCGGCCAGTTCCGt                      <  4:122943/149‑1 (MQ=255)

                                                                                                                                     gCCCAGGCTCGCCTGCTGCGTGTGCTGCAGGAAGGCGAGATACGCCGGGTAGGTTCGGTGCAGTCGC‑AAAAGGTCGATGTGCGCCTGATCGCCGCGACCCACCGCGACCTGAAAAACCTGGCCAAGGCCGGCCAGTTCCGTGAAGACtt              <  4:247821/149‑1 (MQ=255)

                                                                                                                                     gCCCAGGCTCGCCTGCTGCGTGTGCTGCAGGAAGGCGAGATACGCCGGGTAGGTTCGGTGCAGTCGC‑AAAAGGTCGATGTGCGCCTGATCGCCGCAACCCACCGCGACCTGAAAAACCTGGCCAAGGCCGGCCAGTTCCGTGAAGACtt              <  1:202118/149‑1 (MQ=255)

                                                                                                                                       ccAGGCTCGCCTGCTGCGTGTGCTGCAGGAaggcgagcctgggcttcgagcggcagttcgccaatttcatcgaggaacagcgtaccgccatcggcggcctccaccaagccggcgcgcccggcgctggcgccggtgaacgcgcctttttc             <  4:67304‑M2/149‑120 (MQ=255)

                                                                                                                                        cAGGCTCGCCTGCTGCGTGTGCTGCAGGAaggcgagcctgggcttcgagcggcagttcgccaatttcatcgaggaacagcgtaccgccatcggcggcctccaccaagccggcgcgcccggcgctggcgccgg                             <  2:257000‑M2/132‑104 (MQ=255)

                                                                                                                                        cAGGCTCGCCTGCTGCGTGTGCTGCAGGAaggcgagcctgggcttcgagcggcagttcgccaatttcatcgaggaacagcgtaccgccatcggcggcctccaccaagccggcgcgcccggcgctggcgccgg                             >  1:257000‑M2/1‑29 (MQ=255)

                                                                                                                                        cAGGCTCGCCTGCTGCGTGTGCTGCAGGAAGGCGAGATACGCCGGGTAGGTTCGGTGCAGTCGC‑AAAAGGTCGAtgt                                                                                   <  6:318323/77‑1 (MQ=255)

                                                                                                                                        cAGGCTCGCCTGCTGCGTGTGCTGCAGGAAGGCGAGATACGCCGGGTAGGTTCGGTGCAGTCGC‑AAAAGGTCGATGTGCGCCTGATCGCCGCGACCCACCGCGACCTGAAAAACCTGGCCAAggccggcc                              >  2:54928/1‑130 (MQ=255)

                                                                                                                                        cAGGCTCGCCTGCTGCGTGTGCTGCAGGAAGGCGAGATACGCCGGGTAGGTTCGGTGCAGTCGC‑AAAAGGTCGATGTGCGCCTGATCGCCGCGACCCACCGCGACCTGAAAAACCTGGCCAAggccggcc                              <  1:54928/130‑1 (MQ=255)

                                                                                                                                        cAGGCTCGCCTGCTGCGTGTGCTGCAGGAAGGCGAGATACGCCGGGTAGGTTCGGTGCAGTCGC‑AAAAGGTCGATGTGCGCCTGATCGCCGCGACCCACCGCGACCTGAAAAACCTGGCCAAGGCCGGCCAGTTcc                        <  7:124423/136‑1 (MQ=255)

                                                                                                                                        cAGGCTCGCCTGCTGCGTGTGCTGCAGGAAGGCGAGATACGCCGGGTAGGTTCGGTGCAGTCGC‑AAAAGGTCGATGTGCGCCTGATCGCCGCGACCCACCGCGACCTGAAAAACCTGGCCAAGGCCGGCCAGTTCCGTGAAGACTTGTa           <  4:317275/149‑1 (MQ=255)

                                                                                                                                          ggCTCGCCTGCTGCGTGTGCTGCAGGgagcctgggcttcgagcggcagttcgccaatttcatcgaggaacagcgtaccgccatcggcggcctccaccaagccggcgcgcccggc                                             >  1:55344‑M2/1‑27 (MQ=255)

                                                                                                                                            cTCGCCTGCTGCGTGTGCTGCAGGAAGGCGAGATACGCCGGGTAGGTTCGGTGCAGTCGC‑AAAAGGTCGATGTGCGCCTGATCGCCGCGACCCACCGCGACCTGAAAAACCTGGCCAAGGCCGGCCAGTTCCGTGAAGACTTGTATTAc       <  1:135129/149‑1 (MQ=255)

                                                                                                                                            cTCGCCTGCTGCGTGTGCTGCAGGAAGGCGAGATACGCCGGGTAGGTTCGGTGCAGTCGC‑AAAAGGTCGATGTGCGCCTGATCGCCGCGACCCACCGCGACCTGAAAAACCTGGCCAAGGCCGGCCAGTTCCGTGAAGACTTGTATTAc       <  3:58655/149‑1 (MQ=255)

                                                                                                                                             tCGCCTGCTGCGTGTGCTGCAGGAaggcgagcctgggcttcgagcggcagttcgccaatttcatcgaggaacagcgtaccgccatcggcggcctccaccaagccggcgcgcccggcgctggcgccggtgaacgcgcctttttcgtggcc       <  3:123318‑M2/149‑126 (MQ=255)

                                                                                                                                               gCCTtcctgcagcacacgcagcaggcgaacctgggcttcgagcggcagttcgccaatttcatcgaggaacagcgtaccgccatcggcggcctccaccaagccggcgcgcccggcgctggcgccggtgaacgcgcctttttcgtggccg      >  1:99977‑M1/1‑4 (MQ=255)

                                                                                                                                               gCCTGCTGCGTGTGCTGCAGGAaggcgagcctgggcttcgagcggcagttcgccaatttcatcgaggaacagcgtaccgccatcggcggcctccaccaagccggcgcgcccggcgctggcgccggtgaacgcgcctttttcgtggccg      <  2:373230‑M2/148‑127 (MQ=255)

                                                                                                                                               gCCTGCTGCGTGTGCTGCAGGAaggcgagcctgggcttcgagcggcagttcgccaatttcatcgaggaacagcgtaccgccatcggcggcctccaccaagccggcgcgcccggcgctggcgccggtgaacgcgcctttttcgtggccg      <  2:367440‑M2/148‑127 (MQ=255)

                                                                                                                                                ccTtcctgcagcacacgcagcaggcgagcctgggcttcgagcggcagttcgccaatttcatcgaggaacagcgtaccgccatcggcggcctccaccaagccggcgcgcccggcgctggcgccggtgaacgcgcctttttcgtggccgaa    >  3:202344‑M1/1‑3 (MQ=255)

                                                                                                                                                ccTtcctgcagcacacgcagcaggcgagcctgggcttcgagcggcagttcgccaatttcatcgaggaacagcgtaccgccatcggcggcctccaccaagccggcgcgcccggcgctggcgccggtgaacgcgcctttttcgtggccgaa    <  6:243194‑M1/149‑147 (MQ=255)

                                                                                                                                                  ttcctgcagcacacgcagcaggcgagcctgggcttcgagcggcagttcgccaatttcatcgaggaacagcgtaccgccatcggcggcctccaccaagccggcgcgcccggcgctggcgccggtgaacgcgcctttttcgtggccgaaca  <  8:337034‑M1/149‑149 (MQ=255)

                                                                                                                                                  ttcctgcagcacacgcagcaggcgagcctgggcttcgagcggcagttcgccaatttcatcgaggaacagcgtaccgccatcggcggcctccaccaagccggcgcgcccggcgctggcgccggtgaacgcgcctttttcgtggccgaa    >  7:337034‑M1/1‑1 (MQ=255)

GCTGATCGAATCCGAACTGTTCGGCCACGAAAAAGGCGCGTTCACCGGCGCCAGCGCCGGGCGCGCCGGCTTGGTGGAGGCCGCCGATGGCGGTACGCTGTTCCTCGATGAAATTGGCGAACTGCCGCTCGAAGCCCAGGCTCGCCTGCTGCGTGTGCTGCAGGAAGGCGAGATACGCCGGGTAGGTTCGGTGCAGTCGC‑AAAAGGTCGATGTGCGCCTGATCGCCGCGACCCACCGCGACCTGAAAAACCTGGCCAAGGCCGGCCAGTTCCGTGAAGACTTGTATTACCGACT  >  NC_002947/5337195‑5337488

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 14 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.