New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5337341	80 (1.330)	8 (0.140)	7/250	NT	10.3%	coding (791/1443 nt)	PP_4696	nitrogen regulation protein NR(I)
	?	NC_002947	= 5337359	63 (1.100)					coding (809/1443 nt)	PP_4696	nitrogen regulation protein NR(I)

TGTTCGGCCACGAAAAAGGCGCGTTCACCGGCGCCAGCGCCGGGCGCGCCGGCTTGGTGGAGGCCGCCGATGGCGGTACGCTGTTCCTCGATGAAATTGGCGAACTGCCGCTCGAAGCCCAGGCTCGCCTGCTGCGTGTGCTGCAGGAAGGCGAGATACGCCGGGTAGGTTCGGTGCAGTCGC‑AAAAGGTCGATGTGCGCCTGATCGCCGCGACCCACCGCGACCTGAAAAACCTGGCCAAGGCCGGCCAGTTCCGTGAAGACTTGTATTACCGACTGCACGTCATCGCCCTGAAG  >  NC_002947/5337212‑5337507                                                                                                                                                    |                                                                                                                                                      tGTTCGGCCACGAAAAAGGCGCGTTCACCGGCGCCAGCGCCGGGCGCGCCGGCTTGGTGGAGGCCGCCGATGGCGGTACGCTGTTCCTCGATGAAATTGGCGAACTGCCGCTCGAAGCCCAGGCTCGCCTGCTGCGTGTGCTGCAGGAa                                                                                                                                                      <  8:337034‑M2/149‑2 (MQ=255)   ttCGGCCACGAAAAAGGCGCGTTCACCGGCGCCAGCGCCGGGCGCGCCGGCTTGGTGGAGGCCGCCGATGGCGGTACGCTGTTCCTCGATGAAATTGGCGAACTGCCGCTCGAAGCCCAGGCTCGCCTGCTGCGTGTGCTGCAGGAagg                                                                                                                                                    <  6:243194‑M2/149‑4 (MQ=255)   ttCGGCCACGAAAAAGGCGCGTTCACCGGCGCCAGCGCCGGGCGCGCCGGCTTGGTGGAGGCCGCCGATGGCGGTACGCTGTTCCTCGATGAAATTGGCGAACTGCCGCTCGAAGCCCAGGCTCGCCTGCTGCGTGTGCTGCAGGAagg                                                                                                                                                    >  3:202344‑M2/1‑146 (MQ=255)   ttCGGCCACGAAAAAGGCGCGTTCACCGGCGCCAGCGCCGGGCGCGCCGGCTTGGTGGAGGCCGCCGATGGCGGTACGCTGTTCCTCGATGAAATTGGCGAACTGCCGCTCGAAGCCCAGGCTCGCCTGCTGCGTGTGCTGCAGGAa                                                                                                                                                      >  7:337034‑M2/1‑146 (MQ=255)     cGGCCACGAAAAAGGCGCGTTCACCGGCGCCAGCGCCGGGCGCGCCGGCTTGGTGGAGGCCGCCGATGGCGGTACGCTGTTCCTCGATGAAATTGGCGAACTGCCGCTCGAAGCCCAGGTTCGCCTGCTGCGTGTGCTGCAGGAaggc                                                                                                                                                   >  1:99977‑M2/1‑144 (MQ=255)        ccACGAAAAAGGCGCGTTCACCGGCGCCAGCGCCGGGCGCGCCGGCTTGGTGGAGGCCGCCGATGGCGGTACGCTGTTCCTCGATGAAATTGGCGAACTGCCGCTCGAAGCCCAGGCTCGCCTGCTGCGTGTGCTGCAGGAAGGCgaga                                                                                                                                               <  5:366527/149‑1 (MQ=255)         cACGAAAAAGGCGCGTTCACCGGCGCCAGCGCCGGGCGCGCCGGCTTGGTGGAGGCCGCCGATGGCGGTACGCTGTTCCTCGATGAAATTGGCGAACTGCCGCTCGAAGCCCAGGCTCGCCTGCTGCGTGTGCTGCAGGAAGGCGAGAt                                                                                                                                              <  1:319415/149‑1 (MQ=255)         cACGAAAAAGGCGCGTTCACCGGCGCCAGCGCCGGGCGCGCCGGCTTGGTGGAGGCCGCCGATGGCGGTACGCTGTTCCTCGATGAAATTGGCGAACTGCCGCTCGAAGCCCAGGCTCGCCTGCTGCGTGTGCTGCAGGAAGGCGAGAt                                                                                                                                              <  8:103554/149‑1 (MQ=255)          aCGAAAAAGGCGCGTTCACCGGCGCCAGCGCCGGGCGCGCCGGCTTGGTGGAGGCCGCCGATGGCGGTACGCTGTTCCTCGATGAAATTGGCGAACTGCCGCTCGAAGCCCAGGCTCGCCTGCTGCGTGTGCTGCAGGAAGGCGAGATa                                                                                                                                             >  7:154728/1‑149 (MQ=255)          aCGAAAAAGCCGCGAAAAACCCCGCCAGCGCCGGGCCACACGGAATGCAGGAGGCCGCAGAACGCCGAACTCAGAACCTCGATGAAATTGGCGAACTGCCGCACCAACCACAAGCTCGCCTGCTGCGTCTGCTGCAGGAAGAAGAGATa                                                                                                                                             >  6:352235/1‑149 (MQ=255)            gAAAAAGGCGCGTTCACCGGCGCCAGCGCCGGGCGCGCCGGCTTGGTGGAGGCCGCCGATGGCGGTACGCTGTTCCTCGATGAAATTGGCGAACTGCCGCTCGAAGCCCAGGCTCGCCTGCTGCGTGTGCTGCAGGAAGGCGAGATACg                                                                                                                                           >  7:204571/1‑149 (MQ=255)               aaaGGCGCGTTCACCGGCGCCAGCGCCGGGCGCGCCGGCTTGGTGGAGGCCGCCGATGGCGGTACGCTGTTCCTCGATGAAATTGGCGAACTGCCGCTCGAAGCCCAGGCTCGCCTGCTGCGTGTGCTGCAGGAAGGCGAGATACGCCg                                                                                                                                        <  7:48728/149‑1 (MQ=255)                     gcgTTCACCGGCGCCAGCGCCGGGCGCGCCGGCTTGGTGGAGGCCGCCGATGGCGGTACGCTGTTCCTCGATGAAATTGGCGAACTGCCGCTCGAAGCCCAGGCTCGCCTGCTGCGTGTGCTGCAGGAAGGCGAGATACGCCGGGTAgg                                                                                                                                  <  8:204571/149‑1 (MQ=255)                       gTTCACCGGCGCCAGCGCCGGGCGCGCCGGCTTGGTGGAGGCCGCCGATGGCGGTACGCTGTTCCTCGATGAAATTGGCGAACTGCCGCTCGAAGCCCAGGCTCGCCTGCTGCGTGTGCTGCAGGAAGGCGAGATACGCCGGGTAGGtt                                                                                                                                <  6:227330/149‑1 (MQ=255)                           aCCGGCGCCAGCGCCGGGCGCGCCGGCTTGGTGGAGGCCGCCGATGGCGGTACGCTGTTCCTCGATGAAATTGGCGAACTGCCGCTCGAAGCCCAGGCTCGCCTGCTGCGTGTGCTGCAGGAAGGCGAGATACGCCGGGTAGGTTCGGt                                                                                                                            <  6:216924/149‑1 (MQ=255)                           aCCGGCGCCAGCGCCGGGCGCGCCGGCTTGGTGGAGGCCGCCGATGGCGGTACGCTGTTCCTCGATGAAATTGGCGAACTGCCGCTCGAAGCCCAGGCTCGCCTGCTGCGTGTGCTGCAGGAAGGCGAGATACGCCGGGTAGGTTCGGt                                                                                                                            >  4:58655/1‑149 (MQ=255)                           aCCGGCGCCAGCGCCGGGCGCGCCGGCTTGGTGGAGGCCGCCGATGGCGGTACGCTGTTCCTCGATGAAATTGGCGAACTGCCGCTCGAAGCCCAGGCTCGCCTGCTGCGTGTGCTGCAGGAAGGCGAGATACGCCGGGTAGGTTCGGt                                                                                                                            <  2:286850/149‑1 (MQ=255)                            ccGGCGCCAGCGCCGGGCGCGCCGGCTTGGTGGAGGCCGCCGATGGCGGTACGCTGTTCCTCGATGAAATTGGCGAACTGCCGCTCGAAGCCCAGGCTCGCCTGCTGCGTGTGCTGCAGGAAGGCGAGATACGCCGGGTAGGTTCGGTg                                                                                                                           <  8:305351/149‑1 (MQ=255)                                 gcCAGCGCCGGGCGCGCCGGCTTGGTGGAGGCCGCCGATGGCGGTACGCTGTTCCTCGATGAAATTGGCGAACTGCCGCTCGAAGCCCAGGCTCGCCTGCTGCGTGTGCTGCAGGAAGGCGAGATACGCCGGGTAGGTTCGGTGCAGTc                                                                                                                      <  7:236594/149‑1 (MQ=255)                                 gcCAGCGCCGGGCGCGCCGGCTTGGTGGAGGCCGCCGATGGCGGTACGCTGTTCCTCGATGAAATTGGCGAACTGCCGCTCGAAGCCCAGGCTCGCCTGCTGCGTGTGCTGCAGGAAGGCGAGATACGCCGGGTAGGTTCGGTGCAGTc                                                                                                                      <  7:66743/149‑1 (MQ=255)                                    aGCGCCGGGCGCGCCGGCTTGGTGGAGGCCGCCGATGGCGGTACGCTGTTCCTCGATGAAATTGGCGAACTGCCGCTCGAAGCCCAGGCTCGCCTGCTGCGTGTGCTGCAGGAAGGCGAGATACGCCGGGTAGGTTCGGTGCAGTCGc                                                                                                                    >  8:218444/1‑148 (MQ=255)                                    aGCGCCGGGCGCGCCGGCTTGGTGGAGGCCGCCGATGGCGGTACGCTGTTCCTCGATGAAATTGGCGAACTGCCGCTCGAAGCCCAGGCTCGCCTGCTGCGTGTGCTGCAGGAAGGCGAGATACGCCGGGTAGGTTCGGTGCAGTCGc                                                                                                                    >  2:37915/1‑148 (MQ=255)                                       gcCGGGCGCGCCGGCTTGGTGGAGGCCGCCGATGGCGGTACGCTGTTCCTCGATGAAATTGGCGAACTGCCGCTCGAAGCCCAGGCTCGCCTGCTGCGTGTGCTGCAGGAAGGCGAGATACGCCGGGTAGGTTCGGTGCAGTCGC‑aa                                                                                                                 >  3:247821/1‑147 (MQ=255)                                        ccGGGCGCGCCGGCTTGGTGGAGGCCGCCGATGGCGGTACGCTGTTCCTCGATGAAATTGGCGAACTGCCGCTCGAAGCCCAGGCTCGCCTGCTGCGTGTGCTGCAGGAAGGCGAGATACGCCGGGTAGGTTCGGTGCAGTCGC‑AAAAg                                                                                                              <  6:68756/149‑1 (MQ=255)                                          gggCGCGCCGGCTTGGTGGAGGCCGCCGATGGCGGTACGCTGTTCCTCGATGAAATTGGCGAACTGCCGCTCGAAGCCCAGGCTCGCCTGCTGCGTGTGCTGCAGGAAGGCGAGATACGCCGGGTAGGTTCGGTg                                                                                                                           >  5:48873/1‑135 (MQ=255)                                          gggCGCGCCGGCTTGGTGGAGGCCGCCGATGGCGGTACGCTGTTCCTCGATGAAATTGGCGAACTGCCGCTCGAAGCCCAGGCTCGCCTGCTGCGTGTGCTGCAGGAAGGCGAGATACGCCGGGTAGGTTCGGTg                                                                                                                           <  6:48873/135‑1 (MQ=255)                                            gcgcgcCGGCTTGGTGGAGGCCGCCGATGGCGGTACGCTGTTCCTCGATGAAATTGGCGAACTGCCGCTCGAAGCCCAGGCTCGCCTGCTGCGTGTGCTGCAGGAAGGCGAGATACGCCGGGTAGGTTCGGTGCAGTCGC‑AAAAGGTCg                                                                                                          <  3:262454/149‑1 (MQ=255)                                                  cGGCTTGGTGGAGGCCGCCGATGGCGGTACGCTGTTCCTCGATGAAATTGGCGAACTGCCGCTCGAAGCCCAGGCTCGCCTGCTGCGTGTGCTGCAGGAAGGCGAGATACGCCGGGTAGGTTCGGTGCAGTCGC‑AAAAGGTCGATGTgc                                                                                                    >  5:260687/1‑149 (MQ=255)                                                      ttGGTGGAGGCCGCCGATGGCGGTACGCTGTTCCTCGATGAAATTGGCGAACTGCCGCTCGAAGCCCAGGCTCGCCTGCTGCGTGTGCTGCAGGAAGGCGAGATACGCCGGGTAGGTTCGGTGCAGTCAC‑AAAAGGTCGATGTGCGCCt                                                                                                >  3:255229/1‑149 (MQ=255)                                                      aaggtggAGGCCGCCGATGGCGGTACGCTGTTCCTCGATGAAATTGGCGAACTGCCTCTCTAAGCCCAGGCTCGCCACCTGCGTCTGCAGCAGGAAGGAGAAATAACCCGGGTAGGTTAGGTGCAGTCTC‑AAAAGGTCTATGTgctcat                                                                                                >  4:47638/3‑145 (MQ=255)                                                         gtggAGGCCGCCGATGGCGGTACGCTGTTCCTCGATGAAATTGGCGAACTGCCGCTCGAAGCCCAGGCTCGCCTGCTGCGTGTGCTGCAGGAAGGCGAGATACGCCGGGTAGGTTCGGTGCAGTCGC‑AAAAGGTCGATGTGCGCCTGAt                                                                                             >  2:202118/1‑149 (MQ=255)                                                             aGGCCGCCTATGGCGGTACGCTGTTCCTCGATGAAATTGGCCAACTGCCGCTCTAAGCCCAGGCTCGCCTGCTGGGTGTGCTGATGTAAGGCGTGATACGCCGGGTAGGTTCGGTGCAGTCGC‑AAAAGGTCGATGTGCGCCTGATcgcc                                                                                         <  1:99897/149‑1 (MQ=255)                                                             aGGCCGCCGATGGCGGTTCGCTGTTCCTCGATGAAATTGGCTAACTGCAGATCGAATCGCAGGCTCTCCTGCTGCGTGTGCTGGAGGAAGGCGAGATACGCCGGGTAGGTTGGGTGCAGTAGC‑AAAAGGTCGATGTGCGCCTGATcgcc                                                                                         <  5:352235/149‑1 (MQ=255)                                                               gccgccGATGGCGGTACGCTGTTCCTCGATGAAATTGGCGAACTGCCGCTCGAAGCCCAGGCTCGCCTGCTGCGTGTGCTGCAGGAAGGCGAGATACGCCGGGTAGGTTCGGTGCAGTCGC‑aa                                                                                                                 >  3:328598/1‑123 (MQ=255)                                                               gccgccGATGGCGGTACGCTGTTCCTCGATGAAATTGGCGAACTGCCGCTCGAAGCCCAGGCTCGCCTGCTGCGTGTGCTGCAGGAAGGCGAGATACGCCGGGTAGGTTCGGTGCAGTCGC‑aa                                                                                                                 <  4:328598/123‑1 (MQ=255)                                                                 cgccgATGGCGGTACGCTGTTCCTCGATGAAATTGGCGAACTGCCGCTCGAAGCCCAGGCTCGCCTGCTGCGTGTGCTGCAGGAAGGCGAGATACGCCGGGTAGGTTCGGTGCAGTCGC‑AAAAGGTCGATGTGCGCCTGATCGCCGCGa                                                                                     <  5:243194/149‑1 (MQ=255)                                                                 cgccgATGGCGGTACGCTGTTCCTCGATGAAATTGGCGAACTGCCGCTCGAAGCCCAGGCTCGCCTGCTGCGTGTGCTGCAGGAAGGCGAGATACGCCGGGTAGGTTCGGTGCAGTCGC‑AAAAGGTCGATGTGCGCCTGATCGCCGCGa                                                                                     >  3:122943/1‑149 (MQ=255)                                                                 cgccgATGGCGGTACGCTGTTCCTCGATGAAATTGGCGAACTGCCGCTCGAAGCCCAGGCTCGCCTGCTGCGTGTGCTGCAGGAAGGCGAGATACGCCGGGTAGGTTCGGTGCAGTCGC‑AAAAGGTCGATGTGCGCCTGATCGCCGCGa                                                                                     <  2:82774/149‑1 (MQ=255)                                                                         gCGGTACGCTGTTCCTCGATGAAATTGGCGAACTGCCGCTCGAAGCCCAGGCTCGCCTGCTGCGTGTGCTGCAGGAAGGCGAGATACGCCGGGTAGGTTCGGTGCAGTCGC‑AAAAGGTCGATGTGCGCCTGATCGCCGCGACCCACcgc                                                                             <  1:340078/149‑1 (MQ=255)                                                                          cGGTACGCTGTTCCTCGATGAAATTGGCGAACTGCCGCTCGAAGCCCAGGCTCGCCTGCTGCGTGTGCTGCAGGAAGGCGAGATACGCCGGGTAGGTTCGGTGCAGTCGC‑AAAAGGTCGATGTGCGCCTGATCGCCGCGACCCACcgcg                                                                            <  6:168566/149‑1 (MQ=255)                                                                                gCTGTTCCTCGATGAAATTGGCGAACTGCCGCTCGAAGCCCAGGCTCGCCTGCTGCGTGTGCTGCAGGAAGGCGAGATACGCCGGGTAGGTTCGGTGCAGTCGC‑AAAAGGTCGATGTGCGCCTGATCGCCGCGACCCACCGCGACCTg                                                                       >  2:242484/1‑148 (MQ=255)                                                                                 cTGTTCCTCGATGAAATTGGCGAACTGCCGCTCGAAGCCCAGGCTCGCCTGCTGCGTGTGCTGCAGGAAGGCGAGATACGCCGGGTAGGTTCGGTGCAGTCGCAAAAAGGTCGATGTGCGCCTGATCGCCGCGACCCACCGCGACCTGa                                                                      <  1:262535/149‑1 (MQ=255)                                                                                      ccTCGATGAAATTGGCTAACTGCCGCTCGAAGCGCAGGCTCGCCTGCTGCGTGTGCTGCAGGAAGGCGAGATACGCCGGGTAGTTTCGGTGCAGTCGC‑AAAAGGTCGATGTGCGCCTGATCGCCGCGACCCACCGCGAGCTGAAAAAc                                                                 <  4:262619/148‑1 (MQ=255)                                                                                       cTCGATGAAATTGGCGAACTGCCGCTCGAAGCCCAGGCTCGCCTGCTGCGTGTGCTGCAGGAAGGCGAGATACGCCGGGTAGGTTCGGTGCAGTCGC‑AAAAGGTCGATGTGCGCCTGATCGCCGCGACCCACCGCGACCTGAAAAACCt                                                               >  2:135129/1‑149 (MQ=255)                                                                                        tCGATGAAATTGGCGAACTGCCGCTCGAAGCCCAGGCTCGCCTGCTGCGTGTGCTGCAGGAAGGCGAGATACGCCGGGTAGGTTCGGTGCAGTCGC‑AAAAGGTCGCTGTGCGCCTGATCGCCGCGACCCCCCGCGACCTGAAAAACCTg                                                              >  2:359334/1‑149 (MQ=255)                                                                                          gatgatATTGGCGAACTGCCGGTCGTAGCCCAGGCTCGCCTGCTGCGTGTGCTGCAGGAAGGCGAGATACGCCGGGTAGGTTCGGTGCAGTCGC‑AAAAGGTCGATGTGCGCCTGATCGCCGCGACCCACCGCGACCTGAAAAACCTg                                                              <  8:229904/147‑1 (MQ=255)                                                                                          gATGAAATTGGCGAACTGCCGCTCGAAGCCCAGGCTCGCCTGCTGCGTGTGCTGCAGGAAGGCGAGATACGCCGGGTAGGTTCGGTGCCGTCGC‑AAAAGGTCGATGTGCGCCTGATCGCCGCGACCCACCGCGACCTGAAAAACATGGc                                                            >  7:186668/1‑149 (MQ=255)                                                                                          gATGAAATTGGCGAACTGCCGCTCGAAGCCCAGGCTCGCCTGCTGCGTGTGCTGCAGGAAGGCGAGATACGCCGGGTAGGTTCGGTGCAGTCGC‑AAAAGGTCGATGTGCGCCTGATCGCCGCGACCCACCGCGACCTGAAAAACCTGGc                                                            >  8:282677/1‑149 (MQ=255)                                                                                               aaTTGGCGAACTGCCGCTCGAAGCCCAGGCTCGCCTGCTGCGTGTGCTGCAGGAAGGCGAGATACGCCGGGTAGGTTCGGTGCAGTCGC‑AAAAGGTCGATGTGCGCCTGATCGCCGCGACCCACCGCGACCTGAAAAACCTGGCCAAgg                                                       >  6:254016/1‑149 (MQ=255)                                                                                               aaTTGGCGAACTGCCGCTCGAAGCCCAGGCTCGCCTGCTGCGTGTGCTGCAGGAAGGCGAGATACGCCGGGTAGGTTCGGTGCAGTCGC‑AAAAGGTCGATGTGCGCCTGATCGCCGCGACCCACCGCGACCTGAAAAACCTGGCCAAgg                                                       <  8:157495/149‑1 (MQ=255)                                                                                                   cgCGAACTGCCGCTCGAAGCCCAGGCTCGCCTGCTGCGTGTGCTGCAGGAAGGCGAGATACGCCGGGTAGGTTCGGTGCAGTCGC‑CAAAGGTCGATGTGCGCCTGATCGCCGCGACCCACCGCGACCTGAAAAACCTGGCCAAggccg                                                    <  5:325696/147‑1 (MQ=255)                                                                                                      gAACTGCCGCTCGAAGCCCAGGCTCGCCTGCTGCGTGTGCTGCAGGAAGGCGAGATACGCCGGGTAGGTTCGGTGCAGTCGC‑AAAAGGTCGATGTGCGCCTGATCGCCGCGACCCACCGCGACCTGAAAAACCTGGCCAAGGCCGGCCa                                                <  7:282677/149‑1 (MQ=255)                                                                                                       aaCTGCCGCTCGAAGCCCAGGCTCGCCTGCTGCGTGTGCTGCAGGAAGGCGAGATACGCCGGGTAGGTTCGGTGCAGTCGC‑AAAAGGTCGATGTGCGCCTGATCGCCGCGACCCACCGCGACCTGAAAAACCTGGCCAAGGCCGGCCAg                                               >  1:149724/1‑149 (MQ=255)                                                                                                         cTGCCGCTCGAAGCCCAGGCTCGCCTGCTGCGTGTGCTGCAGGAAGGCGAGATACGCCGGGTAGGTTCGGTGCAGTCGC‑AAAAGGTCGATGTGCGCCTGATCGCCGCGACCCACCGCGACCTGAAAAACCTGGCCAAGGCCGGCCAGtt                                             >  7:86041/1‑149 (MQ=255)                                                                                                            ccGCTCGAAGCCCAGGCTCGCCTGCTGCGTGTGCTGCAGGAAGGCGAGATACGCCGGGTAGGTTCGGTGCAGTCGC‑AAAAGGTCGATGTGCGCCTGATCGCCGCGACCCACCGCGACCTGAAAAACCTGGCCAAGGCCGGCCAGTTCCg                                          <  3:30361/149‑1 (MQ=255)                                                                                                             cGCTCGAAGCCCAGGCTCGCCTGCTGCGTGTGCTGCAGGAAGGCGAGATACGCCGGGTAGGTTCGGTGCAGTCGC‑AAAAGGTCGATGTGCGCCTGATCGCCGCGACCCACCGCGACCTGAAAAACCTGGCCAAGGCCGGCCAGTTCCGt                                         <  4:122943/149‑1 (MQ=255)                                                                                                                     gCCCAGGCTCGCCTGCTGCGTGTGCTGCAGGAAGGCGAGATACGCCGGGTAGGTTCGGTGCAGTCGC‑AAAAGGTCGATGTGCGCCTGATCGCCGCGACCCACCGCGACCTGAAAAACCTGGCCAAGGCCGGCCAGTTCCGTGAAGACtt                                 <  4:247821/149‑1 (MQ=255)                                                                                                                     gCCCAGGCTCGCCTGCTGCGTGTGCTGCAGGAAGGCGAGATACGCCGGGTAGGTTCGGTGCAGTCGC‑AAAAGGTCGATGTGCGCCTGATCGCCGCAACCCACCGCGACCTGAAAAACCTGGCCAAGGCCGGCCAGTTCCGTGAAGACtt                                 <  1:202118/149‑1 (MQ=255)                                                                                                                       ccAGGCTCGCCTGCTGCGTGTGCTGCAGGAaggcgagcctgggcttcgagcggcagttcgccaatttcatcgaggaacagcgtaccgccatcggcggcctccaccaagccggcgcgcccggcgctggcgccggtgaacgcgcctttttc                                <  4:67304‑M2/149‑120 (MQ=255)                                                                                                                        cAGGCTCGCCTGCTGCGTGTGCTGCAGGAaggcgagcctgggcttcgagcggcagttcgccaatttcatcgaggaacagcgtaccgccatcggcggcctccaccaagccggcgcgcccggcgctggcgccgg                                                >  1:257000‑M2/1‑29 (MQ=255)                                                                                                                        cAGGCTCGCCTGCTGCGTGTGCTGCAGGAaggcgagcctgggcttcgagcggcagttcgccaatttcatcgaggaacagcgtaccgccatcggcggcctccaccaagccggcgcgcccggcgctggcgccgg                                                <  2:257000‑M2/132‑104 (MQ=255)                                                                                                                        cAGGCTCGCCTGCTGCGTGTGCTGCAGGAAGGCGAGATACGCCGGGTAGGTTCGGTGCAGTCGC‑AAAAGGTCGAtgt                                                                                                      >  5:318323/1‑77 (MQ=255)                                                                                                                        cAGGCTCGCCTGCTGCGTGTGCTGCAGGAAGGCGAGATACGCCGGGTAGGTTCGGTGCAGTCGC‑AAAAGGTCGAtgt                                                                                                      <  6:318323/77‑1 (MQ=255)                                                                                                                        cAGGCTCGCCTGCTGCGTGTGCTGCAGGAAGGCGAGATACGCCGGGTAGGTTCGGTGCAGTCGC‑AAAAGGTCGATGTGCGCCTGATCGCCGCGACCCACCGCGACCTGAAAAACCTGGCCAAggccggcc                                                 >  2:54928/1‑130 (MQ=255)                                                                                                                        cAGGCTCGCCTGCTGCGTGTGCTGCAGGAAGGCGAGATACGCCGGGTAGGTTCGGTGCAGTCGC‑AAAAGGTCGATGTGCGCCTGATCGCCGCGACCCACCGCGACCTGAAAAACCTGGCCAAggccggcc                                                 <  1:54928/130‑1 (MQ=255)                                                                                                                        cAGGCTCGCCTGCTGCGTGTGCTGCAGGAAGGCGAGATACGCCGGGTAGGTTCGGTGCAGTCGC‑AAAAGGTCGATGTGCGCCTGATCGCCGCGACCCACCGCGACCTGAAAAACCTGGCCAAGGCCGGCCAGTTcc                                           >  8:124423/1‑136 (MQ=255)                                                                                                                        cAGGCTCGCCTGCTGCGTGTGCTGCAGGAAGGCGAGATACGCCGGGTAGGTTCGGTGCAGTCGC‑AAAAGGTCGATGTGCGCCTGATCGCCGCGACCCACCGCGACCTGAAAAACCTGGCCAAGGCCGGCCAGTTcc                                           <  7:124423/136‑1 (MQ=255)                                                                                                                        cAGGCTCGCCTGCTGCGTGTGCTGCAGGAAGGCGAGATACGCCGGGTAGGTTCGGTGCAGTCGC‑AAAAGGTCGATGTGCGCCTGATCGCCGCGACCCACCGCGACCTGAAAAACCTGGCCAAGGCCGGCCAGTTCCGTGAAGACTTGTa                              <  4:317275/149‑1 (MQ=255)                                                                                                                          ggCTCGCCTGCTGCGTGTGCTGCAGGgagcctgggcttcgagcggcagttcgccaatttcatcgaggaacagcgtaccgccatcggcggcctccaccaagccggcgcgcccggc                                                                >  1:55344‑M2/1‑27 (MQ=255)                                                                                                                          ggCTCGCCTGCTGCGTGTGCTGCAGGgagcctgggcttcgagcggcagttcgccaatttcatcgaggaacagcgtaccgccatcggcggcctccaccaagccggcgcgcccggc                                                                <  2:55344‑M2/115‑89 (MQ=255)                                                                                                                            cTCGCCTGCTGCGTGTGCTGCAGGAAGGCGAGATACGCCGGGTAGGTTCGGTGCAGTCGC‑AAAAGGTCGATGTGCGCCTGATCGCCGCGACCCACCGCGACCTGAAAAACCTGGCCAAGGCCGGCCAGTTCCGTGAAGACTTGTATTAc                          <  3:58655/149‑1 (MQ=255)                                                                                                                            cTCGCCTGCTGCGTGTGCTGCAGGAAGGCGAGATACGCCGGGTAGGTTCGGTGCAGTCGC‑AAAAGGTCGATGTGCGCCTGATCGCCGCGACCCACCGCGACCTGAAAAACCTGGCCAAGGCCGGCCAGTTCCGTGAAGACTTGTATTAc                          <  1:135129/149‑1 (MQ=255)                                                                                                                             tCGCCTGCTGCGTGTGCTGCAGGAaggcgagcctgggcttcgagcggcagttcgccaatttcatcgaggaacagcgtaccgccatcggcggcctccaccaagccggcgcgcccggcgctggcgccggtgaacgcgcctttttcgtggcc                          <  3:123318‑M2/149‑126 (MQ=255)                                                                                                                               gCCTGCTGCGTGTGCTGCAGGAaggcgagcctgggcttcgagcggcagttcgccaatttcatcgaggaacagcgtaccgccatcggcggcctccaccaagccggcgcgcccggcgctggcgccggtgaacgcgcctttttcgtggccg                         <  2:367440‑M2/148‑127 (MQ=255)                                                                                                                               gCCTGCTGCGTGTGCTGCAGGAaggcgagcctgggcttcgagcggcagttcgccaatttcatcgaggaacagcgtaccgccatcggcggcctccaccaagccggcgcgcccggcgctggcgccggtgaacgcgcctttttcgtggccg                         <  2:373230‑M2/148‑127 (MQ=255)                                                                                                                                   gctgcGTGTGCTGCAGGAAGGCGAGATACGCCGGGTAGGTTCGGTGCAGTCGC‑AAAAGGTCGATGTGCGCCTGATCGCCGCGACCCACCGCGACCTGAAAAACCTGGCCAAGGCCGGCCAGTTCCGTGAAGACTTGTATTACCGACTg                    >  2:86814/1‑148 (MQ=255)                                                                                                                                     tgcGTGTGCTGCAGGAAGGCGAGATACGCCGGGTAGGTTCGGTGCAGTCGC‑AAAAGGTCGATGTGCGCCTGATCGCCGCGACCCACCGCGACCTGAAAAACCTGGCCAAGGCCGGCCAGTTCCGTGAAGACTTGTATTACCGACTGCAc                 <  8:86041/149‑1 (MQ=255)                                                                                                                                       cGTGTGCTGCAGGAAGGCGAGATACGCCGGGTAGGTTCGGTGCAGTCGC‑AAAAGGTCGATGTGCGCCTGATCGCCGCGACCCACCGCGACCTGAAAAACCTGGCCAAGGCCGGCCAGTTCCGTGAAGACTTGTATTACCGACTGCAc                 <  8:154728/147‑1 (MQ=255)                                                                                                                                         tgtgCTGCAGGAAGGCGAGATACGCCGGGTAGGTTCGGTGCAGTCGC‑AAAAGGTCGATGTGCGCCTGATCGCCGCGACCCACCGCGACCTGAAAAACCTGGCCAAGGCCGGCCAGTTCCGTGAAGACTTGTATTACCGACTGCACGTCa             <  7:172554/149‑1 (MQ=255)                                                                                                                                             ctgcAGGAAGGCGAGATACGCCGGGTAGGTTCGGTGCAGTCGC‑AAAAGGTCGATGTGCGCCTGATCGCCGCGACCCACCGCGACCTGAAAAACCTGGCCAAGGCCGGCCAGTTCCGTGAAGACTTGTATTACCGACTGCACGTCATCg          <  5:254016/148‑1 (MQ=255)                                                                                                                                             ctgcAGGAAGGCGAGATACGCCGGGTAGGTTCGGTGCAGTCGC‑AAAAGGTCGATGTGCGCCTGATCGCCGCGACCCACCGCGACCTGAAAAACCTGGCCAAGGCCGGCCAGTTCCGTGAAGACTTGTATTACCGACTGCACGTCATCGc         >  3:62183/1‑149 (MQ=255)                                                                                                                                             ctgcAGGAAGGCGAGATACGCCGGGTAGGTTCGGTGCAGTCGC‑AAAAGGTCGATGTGCGCCTGATCGCCGCGACCCACCGCGACCTGAAAAACCTGGCCAAGGCCGGCCAGTTCCGTGAAGACTTGTATTACCGACTGCACGTCATCGc         <  6:260687/149‑1 (MQ=255)                                                                                                                                                 aGGAAGGCGAGATACGCCGGGTAGGTTCGGTGCAGTCGC‑AAAAGGTCGATGTGCGCCTGATCGCCGCGACCCACCGCGACCTGAAAAACCTGGCCAAGGCCGGCCAGTTCCGTGAAGACTTGTATTACCGACTGCACGTCATCGCCCt      >  3:141420/1‑148 (MQ=255)                                                                                                                                                  ggAAGGCGAGATACGCCGGGTAGGTTCGGTGCAGTCGC‑AAAAGGTCGATGTGCGCCTGATCGCCGCGACCCACCGCGACCTGAAAAACCTGGCCAAGGCCGGCCAGTTCCGTGAAGACTTGTATTACCGACTGCACGTCATCGCCCTg     >  2:57505/1‑148 (MQ=255)                                                                                                                                                   gAAGGCGAGATACGCCGGGTAGGTTCGGTGCAGTCGC‑AAAAGGTCGATGTGCGCCTGATCGCCGCGACCCACCGCGACCTGAAAAACCTGGCCAAGGCCGGCCAGTTCCGTGAAGACTTGTATTACCGACTGCACGTCATCGCCCTg     >  5:222335/1‑147 (MQ=255)                                                                                                                                                    aaGGCGAGATACGCCGGGTAGGTTCTGTGCATTCGC‑AAAAGGTCGATGTGCGCCTGATCGCCGCGACCCACCGCGACCTGAAAAACCTGGCCAAGGCCGGCCAGTTCCGTGAAGACTTGTATTACCGACTGCACGTCATCGCCCTGAAg  <  3:6245/149‑1 (MQ=255)                                                                                                                                                    |                                                                                                                                                      TGTTCGGCCACGAAAAAGGCGCGTTCACCGGCGCCAGCGCCGGGCGCGCCGGCTTGGTGGAGGCCGCCGATGGCGGTACGCTGTTCCTCGATGAAATTGGCGAACTGCCGCTCGAAGCCCAGGCTCGCCTGCTGCGTGTGCTGCAGGAAGGCGAGATACGCCGGGTAGGTTCGGTGCAGTCGC‑AAAAGGTCGATGTGCGCCTGATCGCCGCGACCCACCGCGACCTGAAAAACCTGGCCAAGGCCGGCCAGTTCCGTGAAGACTTGTATTACCGACTGCACGTCATCGCCCTGAAG  >  NC_002947/5337212‑5337507

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.