New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5509285 =	68 (1.130)	4 (0.070)	3/252	NT	5.4%	coding (890/1266 nt)	urtA	urea ABC transporter substrate‑binding protein
	?	NC_002947	5509340 =	74 (1.290)					coding (945/1266 nt)	urtA	urea ABC transporter substrate‑binding protein

ACCAGGGCCTGAAGGCCACCGACGTGCCGGTGGTGGCCTTCTCGGTGGGCGAGGAGGAACTGCGCGGCATCGACACCAAACCGCTGGTGGGCCACCTGGCGGCGTGGAACTACTTCGAATCGGTGGATAACCCGGTCAACCAGAAGTTTGTC‑GCCGACTGGAAGGCCTACGCCAAGGCCAAGGGCCTGCCAGGTGCCGACAAGGCCGTGACCAACGACCCCATGGAAGCCACCTACGTGGGCATCCACATGTGGGCCCAGGCTGTCGAGAAAGCCAAGTCCACTGACGTTGAC  >  NC_002947/5509138‑5509430                                                                                                                                                    |                                                                                                                                                   agtgtgaagcccgacggctactcgaagctctgcccggccagtgcttcgcggaccttgtcaacgtcagtggacttggctttctcgacagcaggggcgcacatgtgtttgcccacgtaggttgattccatggggtcgttggtcacggcctt                                                                                                                                                   >  1:11685‑M1/148‑149 (MQ=255)   ggtgaagcccgacggcgcctcgaagctctgcccggccagtgcttcgcggaccttgtcaacgtcagtggacttggctttctcgacagcctgggcccacatgtggatgcccacgtaggtggcttccatggggtcgttggtcacggccTTGt                                                                                                                                                 <  5:379995‑M1/4‑1 (MQ=255)     gggCCTGAAGGCCACCGACGTGCCGGTGGTGGCCTTCTCGGTGGGCGAGGAGGAACTGCGCGGCATCGACACCAAACCGCTGGTGGGCCACCTGGCGGCGTGGAACTACTTCGAATCGGTGGATAACCCGGTCAACCAGAAGTTTGTC‑g                                                                                                                                              >  6:24919/1‑149 (MQ=255)         gcccgacggcgcctcgaagctctgcccggccagtgcttcgcggaccttgtcaacgtcagtggacttggctttctcgacagcctgggcccacatgtggatgcccacgtaggtggcttccatggggtcgttggtcacggccTTGTC‑GCCGa                                                                                                                                          <  8:139787‑M1/10‑1 (MQ=255)          cccgacggcgcctcgaagctctgcccggccagtgcttcgcggaccttgtcaacgtcagtggacttggctttctcgacagcctgggcccacatgtggatgcccacgtaggtggcttccatggggtcgttggtcacggccTTGTc                                                                                                                                                <  4:284084‑M1/5‑1 (MQ=255)          cccgacggcgcctcgaagctctgcccggccagtgcttcgcggaccttgtcaacgtcagtggacttggctttctcgacagcctgggcccacatgtggatgcccacgtaggtggcttccatggggtcgttggtcacggccTTGTc                                                                                                                                                >  3:284084‑M1/139‑143 (MQ=255)           gAAGGCCACCGACGTGCCGGTGGTGGCCTTCTCGGTGGGCGAGGAGGAACTGCGCGGCATCGACACCAAACCGCTGGTGGGCCACCTGGCGGCGTGGAACTACTTCGACTCGGTGGATAACCCGGTCATCCAGAAGTTTGTC‑GCCGACt                                                                                                                                        >  8:139384/1‑149 (MQ=255)            aaGGCCACCGACGTGCCGGTGGTGGCCTTCTCGGTGGGCGAGGAGGAACTGCGCGGCATCGACACCAAACCGCTGGTGGGCCACCTGGCGGCGTGGAACTACTTCGAATCGGTGGATAACCCGGTCAACCAGAAGTTTGTC‑GCCGACt                                                                                                                                        <  6:57374/148‑1 (MQ=255)              ggCCACCGACGTGCCGGTGGTGGCCTTCTCGGTGGGCGAGGAGGAACTGCGCGGCATCGACACCAAACCGCTGGTGGGCCACCTGGCGGCGTGGAACTACTTCGAATCGGTGGATAACCCGGTCAACCAGAAGTTTGTC‑GCCGACTGGa                                                                                                                                     <  6:318956/149‑1 (MQ=255)                  aCCGACGTGCCGGTGGTGGCCTTCTCGGTGGGCGAGGAGGAACTGCGCGGCATCGACACCAAACCGCTGGTGGGCCACCTGGCGGCGTGGAACTACTTCGAATCGGTGGATAACCCGGTCAACCAGAAGTTTGt                                                                                                                                                 >  2:89673/1‑134 (MQ=255)                  aCCGACGTGCCGGTGGTGGCCTTCTCGGTGGGCGAGGAGGAACTGCGCGGCATCGACACCAAACCGCTGGTGGGCCACCTGGCGGCGTGGAACTACTTCGAATCGGTGGATAACCCGGTCAACCAGAAGTTTGt                                                                                                                                                 <  1:89673/134‑1 (MQ=255)                    cGACGTGCCGGTGGTGGCCTTCTCGGTGGGCGAGGAGGAACTGCGCGGCATCGACACCAAACCGCTGGTGGGCCACCTGGCGGCGTGGAACTACTTCGAATCGGTGGATAACCCGGTCAACCAGAAGTTTGTC‑GCCGACTGGAAGGcc                                                                                                                                >  7:232718/1‑148 (MQ=255)                      aCGTGCCGGTGGTGGCCTTCTCGGTGGGCGAGGAGGAACTGCGCGGCATCGACACCAAACCGCTGGTGGGCCACCTGGCGGCGTGGAACTACTTCGAATCGGTGGATAACCCGGTCAACCAGAAGTTTGt                                                                                                                                                 >  4:237479/1‑130 (MQ=255)                      aCGTGCCGGTGGTGGCCTTCTCGGTGGGCGAGGAGGAACTGCGCGGCATCGACACCAAACCGCTGGTGGGCCACCTGGCGGCGTGGAACTACTTCGAATCGGTGGATAACCCGGTCAACCAGAAGTTTGt                                                                                                                                                 <  3:237479/130‑1 (MQ=255)                            cGGTGGTGGCCTTCTCGGTGGGCGAGGAGGAACTGCGCGGCATCGACACCAAACCGCTGGTGGGCCACCTGGCGGCGTGGAACTACTTCGAATCGGTGGATAACCCGGTCAACCAGAAGTTTGTC‑GCCGACTGGAAGGCCTACgccaag                                                                                                                       >  7:68664/1‑149 (MQ=255)                             ggtggtGGCCTTCTCGGTGGGCGAGGAGGAACTGCGCGGCATCGACACCAAACCGCTGGTGGGCCACCTGGCGGCGTGGAACTACTTCGAATCGGTGGATAACCCGGTCAACCAGAAGTTTGTC‑GCCGACTGGAAGGCCTACgccaagg                                                                                                                      <  3:26946/149‑1 (MQ=255)                                tctggCCTTCTCGGTGGGCGAGGAGTAACTGCGCGGCATCGACACCAAACCGCTGGTGGGCCACCTGGCGGCGTGGAACTACTTCGAATCGGTGGATAACCCGGTCAACCAGAAGTTTGTC‑GCCGACTGGAAGGCCTACgccaaggc                                                                                                                     <  3:233224/145‑1 (MQ=255)                                  tggCCTTCTCGGTGGGCGAGGAGGAACTGCGCGGCATCGACACCAAACCGCTGGTGGGCCACCTGGCGGCGTGGAACTACTTCGAATCGGTGGATAACCCGGTCAACCAGAAGTTTGTC‑GCCGACTGGAAGGCCTACgccaaggccaag                                                                                                                 <  3:118776/149‑1 (MQ=255)                                   ggCCTTCTCGGTGGGCGAGGAGGAACTGCGCGGCATCGACACCAAACCGCTGGTGGGCCACCTGGCGGCGTGGAACTACTTCGAATCGGTGGATAACCCGGTCAACCAGAAGTTTGTC‑GCCGACTGGAAGGCCTACGccaaggccaagg                                                                                                                <  3:2551/149‑1 (MQ=255)                                    gCCTTCTCGGTGGGCGAGGAGGAACTGCGCGGCATCGACACCAAACCGCTGGTGGGCCACCTGGCGGCGTGGAACTACTTCGAATCGGTGGATAACCCGGTCAACCAGAAGTTTGTC‑GCCGACTGGAAGGCCTACGccaaggccaagg                                                                                                                <  7:128990/148‑1 (MQ=255)                                    gCCTTCTCGGTGGGCGAGGAGGAACTGCGCGGCATCGACACCAAACCGCTGGTGGGCCACCTGGCGGCGTGGAACTACTTCGAATCGGTGGATAACCCGGTCAACCAGAAGTTTGTC‑GCCGACTGGAAGGCCTACGccaaggccaagg                                                                                                                <  1:7399/148‑1 (MQ=255)                                    gCCTTCTCGGTGGGCGAGGAGGAACTGCGCGGCATCGACACCAAACCGCTGGTGGGCCACCTGGCGGCGTGGAACTACTTCGAATCGGTGGATAACCCGGTCAACCAGAAGTTTGTC‑GCCGACTGGAAGGCCTACGCCAAGGCCAAggg                                                                                                               >  4:40212/1‑149 (MQ=255)                                    gCCTTCTCGGTGGGCGAGGAGGAACTGAGCGGCATCGACACCAAACCGCTGGTGGGCCAGCTGGCGGCGTGGAACTACTTCGAATCGGTGGATAACCCGGTCAACCAGAAGTTTGTC‑GACGAATGGAAGGCCTACgaaatggccagatc                                                                                                               >  4:233224/1‑145 (MQ=255)                                       ttCTCGGTGGGCGAGGAGGAACTGAGCGGCATCGACACCAAACCGCTGGTGGGCCACCTGGCGGCGTGGAACTACTTCGAATCGGTGGATAACCCGGTCAACCAGAAGTTTGTC‑GCCGACTGGAAGGCCTACGCCAAGGCCAAGGGCCt                                                                                                            >  8:121532/1‑149 (MQ=255)                                         ctcGGTGGGCGAGGAGGAACTGCGCGGCATCGACACCAAACCGCTGGTGGGCCACCTGGCGGCGTGGAACTACTTCGAATCGGTGGATAACCCGGTCAACCAGAAGTTTGTC‑GCCGACTGGAAGGCCTACGCCAAGGCCAAGGGCCt                                                                                                            <  8:287059/147‑1 (MQ=255)                                            ggTGGGCGAGGAGGAACTGCGCGGCATCGACACCAAACCGCTGGTGGGCCACCTGGCGGCGTGGAACTACTTCGAATCGGTGGATAACCCGGTCAACCAGAAGTTTGTC‑GCCGACTGGAAGGCCTACGCCAAGGCCAAGGGCCTGc                                                                                                          <  5:113104/146‑1 (MQ=255)                                            ggTGGGCGAGGAGGAACTGCGCGGCATCGACACCAAACCGCTGGTGGGCCACCTGGCGGCGTGGAACTACTTCGAATCGGTGGATAACCCGGTCAACCAGAAGTTTGTC‑GCCGACTGGAAGGCCTACGCCAAGGCCAAGGGCCTGc                                                                                                          <  1:375399/146‑1 (MQ=255)                                            ggTGGGCGAGGAGGAACTGCGCGGCATCGACACCAAACCGCTGGTGGGCCACCTGGCGGCGTGGAACTACTTCGAATCGGTGGATAACCCGGTCAACCAGAAGTTTGTC‑GCCGACTGGAAGGCCTACGCCAAGGCCAAGGGCCTGCCAg                                                                                                       >  2:195241/1‑149 (MQ=255)                                            ggTGGGCGAGGAGGAAATGATCGGCATCGACACCAAACCGCTGGTGGGCCACCTGGCGGCGTGGAACTACTTCGAATCGGTGGATAACCCGGTCAACCAGAAGTTTGTC‑GCCGACTGGAAGGCCTACGCCAAGGCCAAGGGCCTGCCAg                                                                                                       >  8:284382/1‑149 (MQ=255)                                             gTGGGCGAGGAGGAACTGCGCGGCATCGACACCAAACCGCTGGTGGGCCACCTGGCGGCGTGGAACTACTTCGAATCGGTGGATAACCCGGTCAACCAGAAGTTTGTC‑GCCGACTGGAAGGCCTACGCCAAGGCCAAGGGCCTGCCAgg                                                                                                      >  6:254579/1‑149 (MQ=255)                                              tGGGCGAGGAGGAACTGCGCGGCATCGACTCCAAACCGCTGCTGGGCCACCTGGCGGCGTGGAACTACTTCGAATCGGTGGACAACACGGTCAACCAGAAGTATGTC‑GCCGACTGGAACGCCTACGCCAAGGCCAAGGGCCTGCCAGGt                                                                                                     >  1:257368/1‑149 (MQ=255)                                                ggCGAGGAGGAACTGCGCGGCATCGACACCAAACCGCTGGTGGGCCACCTGGCGGCGTGGAACTACTTCGAATCGGTGGATAACCCGGTCAACCAGAAGTTTGTC‑GCCGACTGGAAGGCCTACGCCAAGGCAAAGGGCCTGCCAGGTGc                                                                                                   >  6:12308/1‑149 (MQ=255)                                                  cGAGGAGGAACTGCGCGGCATCGACACCAAACCGCTGGTGGGCCACCTGGCGGCGTGGAACTACTTCGAATCGGTGGATAACCCGGTCAACCAGAAGTTTGTC‑GCCGACTGGAAGGCCTACGCCAAGGCCAAGGGCCTGCCAGGTGcc                                                                                                  >  1:273932/1‑148 (MQ=255)                                                  cGAGGAGGAACTGCGCGGCATCGACACCAAACCGCTGGTGGGCCACCTGGCGGCGTGGAACTACTTCGAATCGGTGGATAACCCGGTCAACCAGAAGTTTGTC‑GCCGACTGGAAGGCCTACGCCAAGGCCAAGGGCCTGCCAGGTGcc                                                                                                  >  3:52467/1‑148 (MQ=255)                                                         gtcaacgtcagtggacttggctttctcgacagcctgggcccacatgtggatgcccacgtaggtggcttccatggggtcgttggtcacggccTTGTC‑GCCGACTGGAAGGCCTACGGCAAGGCCAAGGGCCTGCCAGGTGCCGACAAg                                                                                            >  1:230548‑M1/92‑147 (MQ=255)                                                         gtcaacgtcagtggacttggctttctcgacagcctgggcccacatgtggatgcccacgtaggtggcttccatggggtcgttggtcacggccTTGTC‑GCCGACTGGAAGGCCTACGCCAAGGCCAAGGGCCTGCCAGGTGCCGACAAg                                                                                            >  3:311220‑M1/92‑147 (MQ=255)                                                          tcaacgtcagtggacttggctttctcgacagcctgggcccacatgtggatgcccacgtaggtggcttccatggggtcgttggtcacggccTTGTC‑GCCGACTGGAAGGCCTACGCCAAGGCCAAGGGCCTGCCAGGTGCCGACAAGGcc                                                                                         >  4:62389‑M1/91‑149 (MQ=255)                                                          aaCTGCGCGGCATCGACACCAAACCGCTGGTGGGCCACCTGGCGGCGTGGAACTACTTCGAATCGGTGGATAACCCGGTCAACCAGAAGTTTGTC‑GCCGACTGGAAGGCCTACGCCAAGGCCAAGGGCCTGCCAGGTGCCGACAAGGcc                                                                                         <  1:195241/149‑1 (MQ=255)                                                           caacgtcagtggacttggctttctcgacagcctgggcccacatgtggatgcccacgtaggtggcttccatggggtcgttggtcacggccTTGTC‑GCCGACTGGAAGGCCTACGCCAAGGCCAAGGGCCTGCCAGGTGCCGACAAGGCCg                                                                                        >  7:139787‑M1/90‑149 (MQ=255)                                                           aCTGCGCGGCATCGACACCAAACCGCTGGTGGGCCACCTGGCGGCGTGGAACTACTTCGAATCGGTGGATAACCCGGTCAACCAGAAGTTTGTC‑GCCGACTGGAAg                                                                                                                                   >  5:195287/1‑106 (MQ=255)                                                           aCTGCGCGGCATCGACACCAAACCGCTGGTGGGCCACCTGGCGGCGTGGAACTACTTCGAATCGGTGGATAACCCGGTCAACCAGAAGTTTGTC‑GCCGACTGGAAg                                                                                                                                   <  6:195287/106‑1 (MQ=255)                                                               cgcgGCATCGACACCAAACCGCTGGTGGGCCACCTGGGGGCGTGGAACTACTTCTAATCGGTGGATAACCCGGTCAACCTGATGTTTGTCTGCCGACTGGAAGGCCTACGCCAAGGCCAAGGGCCTGCCAGGTGCCGACAAGGCCGt                                                                                       <  1:293268/147‑1 (MQ=255)                                                               cgcgGCATCGACACCAAACCGCTGGTGGGCCACCTGGCGGCGTGGAACTACTTCGAATCGGTGGATAACCCGGTCAACCAGAAGTTTGTC‑GCCGACTGGAAGGCCTACGCCAAGGCCAAGGGCCTGCCAGGTGCCGACAAGGCCGTGa                                                                                     <  1:19773/148‑1 (MQ=255)                                                               cgcgGCATCGACACCAAACCGCTGGTGGGCCACCTGGCGGCGTGGAACTACTTCGAATCGGTGGATAACCCGGTCAACCAGAAGTTTGTC‑GCCGACTGGAAGGCCTACGCCAAGGCCAAGGGCCTGCCAGGTGCCGACAAGGCCGTGa                                                                                     <  5:307573/148‑1 (MQ=255)                                                               cgcgGCATCGACACCAAACCGCTGGTGGGCCACCTGGCGGCGTGGAACTACTTCGAATCGGTGCATAACCCGGTCAACCAGAAGTTTGTC‑GCCGACTGGAAGGCCTACGCCAAGGCCAAGGGCCTGCCAGGTGCCGACAAGGCCGTGa                                                                                     <  7:139384/148‑1 (MQ=255)                                                               cgcgGCATCGACACCAAACCGCTGGGGGGCCACCTGGCGGCGTGGAACTACTTCGAATCGGTGGATAACCCGGTCAACCAGAAGTTTGTC‑GCCGACTGGAAGGCCTACGCCAAGGCCAAGGGCCTGCCAGGTGCCGACAAGGCCGTGa                                                                                     <  7:122964/148‑1 (MQ=255)                                                                    cATCGACACCAAACCGCTGGTGGGCCACCTGGCGGCGTGGAACTACTTCGAATCGGTGGATAACCCGGTCAACCAGAAGTTTGTC‑GCCGACTGGAAGGCCTACGCCAAGGCCAAGGGCCTGCCAGGTGCCGACAAGGCCGTGACCAACg                                                                               <  8:232718/149‑1 (MQ=255)                                                                        gACACCAAACCGCTGGTGGGCCACCTGGCGGCGTGGAACTACTTCGAATCGGTGGATAACCCGGTCAACCAGAAGTTTGTC‑GCCGACTGGAAGGCCTACGCCAAGGCCAAGGGCCTGCCAGGTGCCGACAAGGCCGTGACCAACGAccc                                                                           >  1:71505/1‑149 (MQ=255)                                                                        gACACCAAACCGCTGGTGGGCCACCTGGCGGCGTGGAACTACTTCGAATCGGTGGATAACCCGGTCAACCAGAAGTTTGTC‑GCCGACTGGAAGGCCTACGCCAAGGCCAAGGGCCTGCCAGGTGCCGACAAGGCCGTGACCAACGAccc                                                                           >  2:8064/1‑149 (MQ=255)                                                                          cacCAAACCGCTGGTGGGCCACCTGGCGGCGTGGAACTACTTCGAATCGGTGGATAACCCGGTCAACCAGAAGTTTGTC‑GCCGACTGGAAGGCCTACGCCAAGGCCAAGGGCCTGCCAGGTGCCGACAAGGCCGTGACCAACGAcccc                                                                          <  4:38909/148‑1 (MQ=255)                                                                             cAAACCGCTGGTGGGCCACCTGGCGGCGTGGAACTACTTCGAATCGGTGGATAACCCGGTCAACCAGAAGTTTGTC‑GCCGACTGGAAGGCCTACGCCAAGGCCAAGGGCCTGCCAGGTGCCGACAAGGCCGTGACCAACGACCCCATg                                                                       >  7:344179/1‑148 (MQ=255)                                                                                 gcGCTGCTGGGCCACCTGGCGGCGTGGAACTACTTCGACTCCGTCCATAACCCGGTCAACCAGAAGTTCGTC‑GCCGCCTGGAAGGCCTACGCCAAGGCCAAGGGCCTGCCAGGTGCCGACAAGGCCGTGACCAACGACCCCATGGAAGc                                                                  <  8:68664/148‑1 (MQ=255)                                                                                        tggGCCACCTGGCGGCGTGGAACTACTTCGAATCGGTGGATAACCCGGTCAACCAGAAGTTTGTC‑GCCGACTGGAAGGCCTACGCCAAGGCCAAGGGCCTGCCAGGTGCCGACAAGGCCGTGACCAACGACCCCATGGAAGCCACCTAc                                                           <  8:344179/149‑1 (MQ=255)                                                                                          ggCCACCTGGCGGCGTGGAACTACTTCGAATCGGTGGATAACCCGGTCAACCAGAAGTTTGTC‑GCCGACTGGAAGGCCTACGCCAAGGCCAAGGGCCTGCCAGGTGCCGACAAGGCCGTGACCAACGACCCCATGGAAGCCACCTACGt                                                         <  1:48989/149‑1 (MQ=255)                                                                                           gCCACCTGGCGGCGTGGAACTACTTCGAATCGGTGGATAACCCGGTCAACCAGAAGTTTGTC‑GCCGACTGGAAGGCCTACGCCAAGGCCAAGGGCCTGCCAGGTGCCGACAAGGCCGTGACCAACGACCCCATGGAAGCCACCTACGTg                                                        <  2:71505/149‑1 (MQ=255)                                                                                           gCCACCTGGCGGAGGCGAACTCCATCGAATCGGTGGATTACCCGGTCAACCAGAAGTTTGTC‑GCCGAGTGGAAGGCCTTCGCCAAGGCCAAGGGCCTGCCAGGTGCCGACAAGGCCGTGACCAACGACCCCAAGGAAGCCACCTACGTg                                                        <  4:194249/149‑1 (MQ=255)                                                                                                cTGGCGGCGTGGAACTACTTCGAATCGGTGGATAACCCGGTCAACCAGAAGTTTGTC‑GCCGACTGGAAGGCCTACGCCAAGGCCAAGGGCCTGCCAGGTGCCGACAAGGCCGTGACCAACGACCCCATGGAAGCCACCTACGTGGGCAt                                                   >  2:379652/1‑149 (MQ=255)                                                                                                 tGGCGGCGTGGAACTACTTCGAATCGGTGGATAACCCGGTCAACCAGAAGTTTGTC‑GCCGACTGGAAGGCCTACGCCAAGGCCAAGGGCCTGCCAGGTGCCGACAAGGCCGTGACCAACGACCCCATGGAAGCCACCTACGTgg                                                       >  5:350045/1‑144 (MQ=255)                                                                                                 tGGCGGCGTGGAACTACTTCGAATCGGTGGATAACCCGGTCAACCAGAAGTTTGTC‑GCCGACTGGAAGGCCTACGCCAAGGCCAAGGGCCTGCCAGGTGCCGACAAGGCCGTGACCAACGACCCCATGGAAGCCACCTACGTgg                                                       <  6:350045/144‑1 (MQ=255)                                                                                                   gcggcgTGGAACTACTTCGAATCGGTGGATAACCCGGTCAACCAGAAGTTTGTC‑GCCGACTGGAAGGCCTACGCCAAGGCCAAGGGCCTGCCAGGTGCCGACAAGGCCGTGACCAACGACCCCATGGAAGCCACCTACGTGGGCATCca                                                >  8:34640/1‑149 (MQ=255)                                                                                                        gTGGAACTACTTCGAATCTGTGGATAACCCGGTCAACCAGAAGTTTGTC‑GCCGACTGGAAGGCCTACGCCAAGGCCAAGGGCCTGCCAGGTGCCGACAAGGCCGTGACCAACGACCCCATGGAAGCCACCTACGTGGGCATCCACAtgt                                           <  7:284382/149‑1 (MQ=255)                                                                                                               tactTCGAATCGGTGGATAACCCGGTCAACCAGAAGTTTGTC‑GCCGACTGGAAGGCCTACGCCAAGGCCAAGGGCCTGCCAGGTGCCGACAAGGCCGTGACCAACGACCCCATGGAAGCCACCTACGTGGGCATCCACATGTGGGCCCa                                    <  7:121532/149‑1 (MQ=255)                                                                                                                 ctTCGAATCGGTGGATAACCCGGTCAACCAGAAGTTTGTC‑GCCGACTGGAAGGCCTACGCCAAGGCCAAGGGCCTGCCAGGTGCCGACAAGGCCGTGACCAACGACCCCATGGAAGCCACCTACGTGGGCATCCACATGTGGGCCCAgg                                  <  3:40212/149‑1 (MQ=255)                                                                                                                  ttCGAATCGGTGGATAACCCGGTCAACCAGAAGTTTGTC‑GCCGACTGGAAGGCCTACGCCAAGGCCAAGGGCCTGCCAGGTGCCGACAAGGCCGTGACCAACGACCCCATGGAAGCCACCTACGTGGGCATCCACATGTGGGCCCAGGc                                 >  5:26889/1‑149 (MQ=255)                                                                                                                  ttCGAATCGGTGGATAACCCGGTCAACCAGAAGTTTGTC‑GCCGACTGGAAGGCCTACGCCAAGGCCAAGGGCCTGCCAGGTGCCGACAAGGCCGTGACCAACGACCCCATGGAAGCCACCTACGTGGGCATCCACATGTGGGCCCAGGc                                 >  4:72082/1‑149 (MQ=255)                                                                                                                     gAATCGGTGGATAACCCGGTCAACCAGAAGTTTGTC‑GCCGACTGGAAGGCCTACGCCAAGGCCAAGGGCCTGCCAGGTGCCGACAAGGCCGTGACCAACGACCCCATGGAAGCCACCTACGTGGGCATCCACATGTGGGCCCAGGCTGt                              >  5:26492/1‑149 (MQ=255)                                                                                                                       aTCGGTGGATAACCCGGTCAACCAGAAGTTTGTC‑GCCGACTGGAAGGCCTACGCCAAGGCCAAGGGCCTGCCAGGTGCCGACAAGGCCGTGACCAACGACCCCATGGAAGCCACCTACGTGGGCATCCACATGTGGGCCCAGGCTGTCg                            <  6:26492/149‑1 (MQ=255)                                                                                                                        tCGGTGGATAACCCGGTCAACCAGAAGTTTGTC‑GCCGACTGGAAGGCCTACGCCAAGGCCAAGGGCCTGCCAGGTGCCGACAAGGCCGTGACCAACGACCCCATGGAAGCCACCTACGTGGGCATCCACATGTGGGCCCAGGCTGTCga                           <  3:144496/149‑1 (MQ=255)                                                                                                                        tCGGTGGATAACCCGGTCAACCAGAAGTTTGTC‑GCCGACTGGAAGGCCTACGCCAAGGCCAAGGGCCTGCCAGGTGCCGACAAGGCCGTGACCAACGACCCCATGGAAGCCACCTACGTGGGCATCCACATGTGGGCCCAGGCTGTCga                           >  3:269431/1‑149 (MQ=255)                                                                                                                           gTGGATAACCCGGTCAACCAGAAGTTTGTC‑GCCGACTGGAAGGCCTACGCCAAGGCCAAGGGCCTGCCAGGTGCCGACAAGGCCGTGACCAACGACCCCATGGAAGCCACCTACGTGGGCATCCACATGTGGGCCCAGGCTGTCgaga                         >  5:348868/1‑148 (MQ=255)                                                                                                                           gTGGATAACCCGGTCAACCAGAAGTTTGTC‑GCCGACTGGAAGGCCTACGCCAAGGCCAAGGGCCTGCCAGGTGCCGACAAGGCCGTGACCAACGACCCCATGGAAGCCACCTACGTGGGCATCCACATGTGGGCCCAGGCTGTCgaga                         >  7:18683/1‑148 (MQ=255)                                                                                                                           gTGGATAACCCGGTCAACCAGAAGTTTGTC‑GCCGACTGGAAGGCCTACGCCAAGGCCAAGGGCCTGCCAGGTGCCGACAAGGCCGTGACCAACGACCCCATGGAAGCCACCTACGTGGGCATCCACATGTGGGCCCAGGCTGTCgaga                         >  6:134812/1‑148 (MQ=255)                                                                                                                             ggATAACCCGGTCAACCAGAAGTTTGTC‑GCCGACTGGAAGGCCTACGCCAAGGCCAAGGGCCTGCCAGGTGCCGACAAGGCCGTGACCAACGACCCCATGGAAGCCACCTACGTGGGCATCCACATGTGGGCCCAGGCTGTCGAGAAAg                      >  1:6183/1‑149 (MQ=255)                                                                                                                             ggATAACCCGGTCAACCAGAAGTTTGTC‑GCCGACTGGAAGGCCTACGCCAAGGCCAAGGGCCTGCCAGGTGCCGACAAGGCCGTGACCAACGACCCCATGGAAGCCACCTACGTGGGCATCCACATGTGGGCCCAGGCTGTCGAGAAAg                      >  3:24339/1‑149 (MQ=255)                                                                                                                                  aCCCGGTCAACCAGAAGTTTGTC‑GCCGACTGGAAGGCCTACGCCAAGGCCAAGGGCCTGCCAGGTGCCGACAAGGCCGTGACCAACGACCCCATGGAAGCGACCTACGTGGGCATCCACATGTGGGCCCAGGCTGTCGAGAAAGCCaa                  <  4:269431/148‑1 (MQ=255)                                                                                                                                  aCCCGGTCAACCAGAAGTTTGTC‑GCCGACTGGAAGGCCTACGCCAAGGCCAAGGGCCTGCCAGGTGCCGACAAGGCCGTGACCAACGACCCCATGGAAGCCACCTACGTGGGCATCCACATGTGGGCCCAGGCTGTCGAGAAAGCCaa                  <  6:348868/148‑1 (MQ=255)                                                                                                                                   cccGGTCAACCAGAAGTTTGTC‑GCCGACTGGAAGGCCTACGCCAAGGCCAAGGGCCTGCCAGGTGCCGACAAGGCCGTGACCAACGACCCCATGGAAGCCACCTACGTGGGCATCCACATGTGGGCCCAGGCTGTCGAGAAAGCCAAGt                >  4:169669/1‑149 (MQ=255)                                                                                                                                    ccGGTCAACCAGAAGTTTGTC‑GCCGACTGGAAGGCCTACGCCAAGGCCAAGGGCCTGCCAGGTGCCGACAAGGCCGTGACCAACGACCCCATGGAAGCCACCTACGTGGGCATCCACATGTGGGCCCAGGCTGTCGAGAAAGCCAAGTc               >  6:213274/1‑149 (MQ=255)                                                                                                                                       gTCAACCAGAAGTTTGTC‑GCCGACTGGAAGGCCTACGCCAAGGCCAAGGGCCTGCCAGGTGCCGACAAGGCCGTGACCAACGACCCCATGGAAGCCACCTACGTGGGCATCCACATGTGGGCCCAGGCTGTCGAGAAAGCCAAGTCCAc            <  1:8064/149‑1 (MQ=255)                                                                                                                                            ccAGAAGTTTGTC‑GCCGACTGGAAGGCCTACGCCAAGGCCAAGGGCCTGCCAGGTGCCGACAAGGCCGTGACCAACGACCCCATGGAAGCCACCTACGTGGGCATCCACATGTGGGCCCAGGCTGTCGAGAAAGCCAAGTCCACTGACg       >  3:190182/1‑149 (MQ=255)                                                                                                                                            ccAGAAGTTTGTC‑GCCGACTGGAAGGCCTACGCCAAGGCCAAGGGCCTGCCAGGTGCCGACAAGGCCGTGACCAACGACCCCATGGAAGCCACCTACGTGGGCATCCACATGTGGGCCCAGGCTGTCGAGAAAGCCAAGTCCACTGACg       >  3:318082/1‑149 (MQ=255)                                                                                                                                                aaGTTTGTC‑GCCGACTGGAAGGCCTACGCCTAGGCCAAGGGCCTGCCAGGTGCCGACAAGGGCGTGACCAAGGACCCCATGGAAGCCACCTACGTCGGCATCCAGATGTGGGCCCAGGCTGTCGAGAATGCCAAGTCCACTGACGtt     <  2:257368/147‑1 (MQ=255)                                                                                                                                                   tttGTC‑GCCGACTGGAAGGCCTACGCCAAGGCCAAGGGCCTGCCAGGTGCCGACAAGGCCGTGACCAACGACCCCATGGAAGCCACCTACGTGGGCATCCACATGTGGGCCCAGGCTGTCGAGAAAGCCAAGTCCACTGACGTTGAc  >  6:370295/1‑147 (MQ=255)                                                                                                                                                   tttGTC‑GCCGACTGGAAGGCCTACGCCAAGGCCAAGGGCCTGCCAGGTGCCGACAAGGCCGTGACCAACGACCCCATGGAAGCCACCTACGTGGGCATCCACATGTGGGCCCAGGCTGTCGAGAAAGCCAAGTCCACTGACGTTGAc  >  3:181455/1‑147 (MQ=255)                                                                                                                                                    |                                                                                                                                                   ACCAGGGCCTGAAGGCCACCGACGTGCCGGTGGTGGCCTTCTCGGTGGGCGAGGAGGAACTGCGCGGCATCGACACCAAACCGCTGGTGGGCCACCTGGCGGCGTGGAACTACTTCGAATCGGTGGATAACCCGGTCAACCAGAAGTTTGTC‑GCCGACTGGAAGGCCTACGCCAAGGCCAAGGGCCTGCCAGGTGCCGACAAGGCCGTGACCAACGACCCCATGGAAGCCACCTACGTGGGCATCCACATGTGGGCCCAGGCTGTCGAGAAAGCCAAGTCCACTGACGTTGAC  >  NC_002947/5509138‑5509430

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.