New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5811000	74 (1.230)	4 (0.070)	4/254	NT	5.0%	coding (328/2220 nt)	priA	primosome assembly protein
	?	NC_002947	= 5811050	80 (1.380)					coding (378/2220 nt)	priA	primosome assembly protein

CGACAAACTGAAGCCTGCCAGCGCCCTGCTCGA‑CCCGGTGTCCCCCATCCCCGCGTCGCTGTTCAAGTTGTG‑CCTGTGGACCGCCCAGTACTACCAGCACAGCCTGGGCGATACCCTGAGCTGGGCGCTGCCCACGCTACTGCGCCAGGGCGAAGCCGCCGAAATGCGCCAGGAACGCTTCTGGCACATAGCCCCGGGCGCCCGCCTGGAAGACCCGCGCATCGCCCGCGCGCCGCGCCAGCGCGACGCCCTCAAGACCCTGGCCCAGCACCCGCACGGCGTGGCCCACAGCCT  >  NC_002947/5810855‑5811148                                                                                                                                                    |                                                                                                                                                     cgACAAACTGAAGCCTGCCAGCGCCCTGCTCGA‑CCCGGTGTCCCCCATCCCCGCGTCGCTGTTCAAGTTGTG‑CCTGTGGACCGCCCAGTACTACCAGCACAGCCTGGGCGATACCCTGAGCTGGGCGCTGCCCACGCTACTGCGCCAgg                                                                                                                                                   <  3:112403/149‑1 (MQ=255)   aCAAACTGAAGCCTGCCAGCGCCCTGCTCGA‑CCCGGTGTCCCCCATCCCCGCGTCGCTGTTCAAGTTGTG‑CCTGTGGACCGCCCAGTACTACCAGCACAGCCTGGGCGATACCCTGAGCTGGGCGCTGCCCACGCTACTGCGCCAGGGc                                                                                                                                                 <  5:342249/149‑1 (MQ=255)      aaCTGAAGCCTGCCTGCGCCCTGCTCGA‑CCCGGTGTCCCCCATCCCCGCGTCGCTGTTCAAGTTGTG‑CCTGTGGACCGCCCAGTACTACCAGCACAGCCTGGGCGATACCCTGAGCTGGGCGCTGCCCACGCTACTGCGCCAGGGCGaa                                                                                                                                              <  7:329709/149‑1 (MQ=255)      aaCTGAAGCCTGCCAGCGCCCTGCTCGAGCCCGGTGTCCCCCATCCCCGCGTCGCTGTTCAAGTTGTG‑CCTGTGGACCGCCCAGTACTACCAGCACAGCCTGGGCGATACCCTGAGCTGGGCGCTGCCCACGCTACAGCGCCAGGGCg                                                                                                                                                >  1:22797/1‑148 (MQ=255)      aaCTGAAGCCTGCCAGCGCCCTGCTCGA‑CCCGGTGTCCCCCATCCCCGCGTCGCTGTTCAAGTTGTG‑CCTGTGGACCGCCCAGTACTACCAGCACAGCCTGGGCGATACCCTGAGCTGGGCGCTGCCCACGCTACTGCGCCAGGGCGaa                                                                                                                                              <  1:14070/149‑1 (MQ=255)      aaCTGAAGCCTGCCAGCGCCCTGCTCGA‑CCCGGTGTCCCCCATCCCCGCGTCGCTGTTCAAGTTGTG‑CCTGTGGACCGCCCAGTACTACCAGCACAGCCTGGGCGATACCCTGAGCTGGGCGCTGCCCACGCTACTGCGCCAGGGCGaa                                                                                                                                              <  5:38887/149‑1 (MQ=255)         tGAAGCCTGCCAGCGCCCTGCTCGA‑CCCGGTGTCCCCCATCCCCGCGTCGCTGTTCAAGTTGTG‑CCTGTGGACCGCCCAGTACTACCAGCACAGCCTGGGCGATACCCTGAGCTGGGCGCTGCCCACGCTACTGCGCCAggg                                                                                                                                                  <  8:192468/142‑1 (MQ=255)         tGAAGCCTGCCAGCGCCCTGCTCGA‑CCCGGTGTCCCCCATCCCCGCGTCGCTGTTCAAGTTGTG‑CCTGTGGACCGCCCAGTACTACCAGCACAGCCTGGGCGATACCCTGAGCTGGGCGCTGCCCACGCTACTGCGCCAggg                                                                                                                                                  >  7:192468/1‑142 (MQ=255)              ccTGCCAGCGCCCTGCTCGA‑CCCGGTGTCCCCCATCCCCGCGTCGCTGTTCAAGTTGTG‑CCTGTGGACCGCCCAGTACTACCAGCACAGCCTGGGCGATACCCTGAGCTGGGCGCTGCCCACGCTACTGCGCCAGGGCGAAGccgccg                                                                                                                                       >  2:51165/1‑148 (MQ=255)                  ccAGCGCCCTGCTCGA‑CCCGGTGTCCCCCATCCCCGCGTCGCTGTTCAAGTTGTG‑CCTGTGGACCGCCCAGTACTACCAGCACAGCCTGGGCGATACCCTGAGCTGGGCGCTGCCCACGCTACTGCGCCAGGGCGAAGCCGCCGaaa                                                                                                                                    <  5:72254/147‑1 (MQ=255)                    aGCGCCCTGCTCGA‑CCCGGTGTCCCCCATCCCCGCGTCGCTGTTCAAGTTGTG‑CCTGTGGACCGCCCAGTACTACCAGCACAGCCTGGGCGATACCCTGAGCTGGGCGCTGCCCACGCTACTGCGCCAGGGCGaa                                                                                                                                              <  6:294706/135‑1 (MQ=255)                    aGCGCCCTGCTCGA‑CCCGGTGTCCCCCATCCCCGCGTCGCTGTTCAAGTTGTG‑CCTGTGGACCGCCCAGTACTACCAGCACAGCCTGGGCGATACCCTGAGCTGGGCGCTGCCCACGCTACTGCGCCAGGGCGaa                                                                                                                                              >  5:294706/1‑135 (MQ=255)                     gcgcCCTGCTCGA‑CCCGGTGTCCCCCATCCCCGCGTCGCTGTTCAAGTTGTG‑CCTGTGGACCGCCCAGTACTACCAGCACAGCCTGGGCGATACCCTGAGCTGGGCGCTGCCCACGCTACTGCGCCAGGGCGAAGCCGCCGAAATgcgc                                                                                                                               <  3:172187/149‑1 (MQ=255)                       gcCCTGCTCGA‑CCCGGTGTCCCCCATCCCCGCGTCGCTGTTCAAGTTGTG‑CCTGTGGACCGCCCAGTACTACCAGCACAGCCTGGGCGATACCCTGAGCTGGGCGCTGCCCACGCTACTGCGCCAGGGCGAAGCCGCCGAAATgcgc                                                                                                                               >  4:7139/1‑147 (MQ=255)                       gcCCTGCTCGA‑CCCGGTGTCCCCCATCCCCGCGTCGCTGTTCAAGTTGTG‑CCTGTGGACCGCCCAGTACTACCAGCACAGCCTGGGCGATACCCTGAGCTGGGCGCTGCCCACGCTACTGCGCCAGGGCGAAGCCGCCGAAATGCGCCa                                                                                                                             <  8:23150/149‑1 (MQ=255)                         ccTGCTCGA‑CCCGGTGTCCCCCATCCCCGCGTCGCTGTTCAAGTTGTG‑CCTGTGGACCGCCCAGTACTACCAGCACAGCCTGGGCGATACCCTGAGCTGGGCGCTGCCCACGCTACTGCGCCAGGGCGAAGCCGCCGAAATGCGCCAg                                                                                                                            >  7:9664/1‑148 (MQ=255)                         ccTGCTCGA‑CCCGGTGTCCCCCATCCCCCCGTCGCTGTTCAAGTTGTG‑CCTGTGGACCGCCCAGTACTACCAGCACAGCCTGGGCGATACCCTGAGCTGGGCGCTGCCCACGCTACTGCGCCcggggctatgtgccagaagcgttcctg                                                                                                                           >  1:214740‑M1/1‑122 (MQ=255)                                 a‑CCCGGTGTCCCCCATCCCCGCGTCGCTGTTCAAGTTGTG‑CCTGTGGACCGCCCAGTACTACCAGCACAGCCTGGGCGATACCCTGAGCTGGGCGCTGCCCACGCTACTGCGCCcggggctatgtgccagaagcgttcctggcgcattt                                                                                                                   >  5:88483‑M1/1‑114 (MQ=255)                                        tgtCCCCCATCCCCGCGTCGCTGTTCAAGTTGTG‑CCTGTGGACCGCCCAGTACTACCAGCACAGCCTGGGCGATACCCTGAGCTGGGCGCTGCCCACGCTACTGCGCCAGGGCGAAGCCGCCGAAATGCGCCAGGAACGCTTCTGGc                                                                                                               <  5:334860/147‑1 (MQ=255)                                        tgtCCCCCATCCCCGCGTCGCTGTTCAAGTTGTG‑CCTGTGGACCGCCCAGTACTACCAGCACAGCCTGGGCGATACCCTGAGCTGGGCGCTGCCCACGCTACTGCGCCAGGGCGAAGCCGCCGAAATGCGCCAGGAACGCTTCTGGc                                                                                                               >  6:334860/1‑147 (MQ=255)                                          tCCCCCATCCCCGCGTCGCTGTTCAAGTTGTG‑CCTGTGGACCGCCCAGTACTACCAGCACAGCCTGGGCGATACCCTGAGCTGGGCGCTGCCCACGCTACTGCGCCAGGGCGAAGCCGCCGAAATGCGCCAGGAACGCTTCTGGcaca                                                                                                            >  3:211001/1‑148 (MQ=255)                                            ccccATCCCCGCGTCGCTGTTCAAGTTGTG‑CCTGTGGACCGCCCAGTACTACCAGCACAGCCTGGGCGATACCCTGAGCTGGGCGCTGCCCACGCTACTGCGCCAGGGCGAAGCCGCCGAAATGCGCCAGGAACGCTTCTGGCACATAg                                                                                                         >  4:50394/1‑149 (MQ=255)                                            ccccATCCCCGCGTCGCTGTTCAAGTTGTG‑CCTGTGGACCCCCCAGTACTACCAGCACAGCCTGGCCGAGACCCTGAGCTGGGCGCTGCCCCCGCTCCTGCGCCCGGGCGAAGACGCCGAAATGCGCAAGGAACGCTTCTGGCACATAg                                                                                                         >  4:278334/1‑149 (MQ=255)                                              ccATCCCCGCGTCGCTGTTCAAGTTGTGCCCTGTGGACCGCCCAGTACTACCAGCACAGCCTGGGCGATACCCTGAGCTGGGCGCTGCCCACGCTACTGCGCCAGGGCGAAGCCGCCGAAATGCGCCAGGAACGCTTCTGGCACATAGc                                                                                                        >  1:221083/1‑149 (MQ=255)                                              ccATCCCCGCGTCGCTGTTCAAGTTGTG‑CCTGTGGACCGCCCAGTACTACCAGCACAGCCTGGGCGATACCCTGAGCTGGGCGCTGCCCACGCTACTGCGCCAGGGCGAAGCCGCCGAAATGCGCCAGGAACGCTTCTGGCACATAGcc                                                                                                       >  2:63291/1‑149 (MQ=255)                                              ccATCCCCGCGTCGCTGTTCAAGTTGTG‑CCTGTGGACCGCCCAGTACTACCAGCACAGCCTGGGCGATACCCTGAGCTGGGCGCTGCCCACGCTACTGCGCCAGGGCGAAGCCGCCGAAATGCGCCAGGAACGCTTCTGGCACATAGcc                                                                                                       >  4:229381/1‑149 (MQ=255)                                                aTCCCCGCGTCGCTGTTCAAGTTGTG‑CCTGTGGACCGCCCAGTACTACCAGCACAGCCTGGGCGATACCCTGAGCTGGGCGCTGCCCACGCTACTGCGCCAGGGCGAAGCCGCCGAAATGCGCCAGGAACGCTTCTGGCACATAGcccc                                                                                                     <  1:154771/149‑1 (MQ=255)                                                  ccccGCGTCGCTGTTCAAGTTGTG‑CCTGTGGACCGCCCAGTACTACCAGCACAGCCTGGGCGATACCCTGAGCTGGGCGCTGCCCACGCTACTGCGCCAGGGCGAAGCCGCCGAAATGCGCCAGGAACGCTTCTGGCACATAGCCCCGg                                                                                                   >  3:214683‑M2/1‑148 (MQ=255)                                                   cccGCGGCGCTGTTCAAGTTGTG‑CCTGTGGACCGCCCAGTACTACCAGCACAGCCTGGGCGATACCCTGAGCTGGGCGCTGCCCACGCTACTGCGCCAGGGCGAAGCCGCCGAAATGCGCCAGGAACGCTTCTGGCACATAGCCCCGgg                                                                                                  >  8:147459‑M2/1‑147 (MQ=255)                                                    ccGCGTCGCTGTTCAAGTTGTG‑CCTGTGGACCGCCCAGTACTACCAGCACAGCCTGGGCGATACCCTGAGCTGGGCGCTGCCCACGCTACTGCGCCAGGGCGAAGCCGCCGAAATGCGCCAGGAACGCTTCTGGCACATAGCCCCGggc                                                                                                 <  2:355680‑M2/149‑4 (MQ=255)                                                    ccGCGTCGCTGTTCAAGTTGTG‑CCTGTGGACCGCCCAGTACTACCAGCACAGCCTGGGCGATACCCTGAGCTGGGCGCTGCCCACGCTACTGCGCCAGGGCGAAGCCGCCGAAATGCGCCAGGAACGCTTCTGGCACATAGCCCCGggc                                                                                                 <  7:54084‑M2/149‑4 (MQ=255)                                                     cgcgTCGCTGTTCAAGTTGTG‑CCTGTGGACCGCCCAGTACTACCAGCACAGCCTGGGCGATACCCTGAGCTGGGCGCTGCCCACGCTACTGCGCCAGGGCGAAGCCGCCGAAATGCGCCAGGAACGCTTCTGGCACATAGCCCCGggcg                                                                                                <  4:140145‑M2/149‑5 (MQ=255)                                                        gTCGCTGTTCAAGTTGTG‑CCTGTGGACCGCCCAGTACTACCAGCACAGCCTGGGCGATACCCTGAGCTGGGCGCTGCCCACGCTACTGCGCCcggggctatgtgccagaagcgttcctggcgcatttcggcggcttcgccctggcgcag                                                                                             <  2:214740‑M1/149‑58 (MQ=255)                                                           gCTGTTCAAGTTGTG‑CCTGTGGACCGCCCAGTACTACCAGCACAGCCTGGGCGATACCCTGAGCTGGGCGCTGCCCACGCTACTGCGCCcggggctatgtgccagaagcgttcctggcgcatttcggcggcttcgccctggcgcagta                                                                                           <  6:88483‑M1/148‑60 (MQ=255)                                                              gTTCAAGTTGTG‑CCTGTGGACCGCCCAGTACTACCAGCACAGCCTGGGCGATACCCTGAGCTGGGCGCTGCCCACGCTACTGCGCCAGGGCGAAGCCGCCGAAATGCGCCAGGAACGCTTCTGGCACATAGCCCCGGGCGCCCGCCTg                                                                                        >  7:90714/1‑148 (MQ=255)                                                               ttCAAGTTGTG‑CCTGTGGACCGCCCAGTACTACCAGCACAGCCTGGGCGATACCCTGAGCTGGGCGCTGCCCACGCTACTGCGCCAGGGCGAAGCCGCCGAAATGCGCCAGGAACGCTTCTGGCACATAGCCCCGGGCGCCCGCCTgg                                                                                       >  8:218570/1‑148 (MQ=255)                                                               ttCAAGTTGTG‑CCTGTGGACCGCCCAGTACTACCAGCACAGCCTGGGCGATACCCTGAGCTGGGCGCTGCCCACGCTACTGCGCCAGGGCGAAGCCGCCGAAATGCGCCAGGAACGCTTCTGGCACATAGCCCCGGGCGCCCGCCTgg                                                                                       <  8:9664/148‑1 (MQ=255)                                                                 cAAGTTGTG‑CCTGTGGACCGCCCAGTACTACCAGCACAGCCTGGGCGATACCCTGAGCTGGGCGCTGCCCACGCTACTGCGCCAGGGCGAAGCCGCCGAAATGCGCCAGGAACGCTTCTGGCACATAGCCCCGGGCGCCCGCCTgg                                                                                       >  3:352761/1‑146 (MQ=255)                                                                 cAAGTTGTG‑CCTGTGGACCGCCCAGTACTACCAGCACAGCCTGGGCGATACCCTGAGCTGGGCGCTGCCCACGCTACTGCGCCAGGGCGAAGCCGCCGAAATGCGCCAGGAACGCTTCTGGCACATAGCCCCGGGCGCCCGCCTgg                                                                                       >  6:125972/1‑146 (MQ=255)                                                                   aGTTGTG‑CCTGTGGACCGCCCAGTACTACCAGCACAGCCTGGGCGATACCCTGAGCTGGGCGCTGCCCACGCTACTGCGCCAGGGCGAAGCCGCCGAAATGCGCCAGGAACGCTTCTGGCACATAGCCCCGGGCGCCCGCCTGGAAGAc                                                                                  <  3:7139/149‑1 (MQ=255)                                                                           ccTGTGGACCGCCCAGTACTACCAGCACAGCCTGGGCGATACCCTGAGCTGGGCGCTGCCCACGCTACTGCGCCAGGGCGAAGCCGCCGAAATGCGCCAGGAACGCTTCTGGCACATAGCCCCGGGCGCCCGCCTGGAAGACCCGCGCa                                                                           <  3:140145/149‑1 (MQ=255)                                                                               tgGACCGCCCAGTACTACCAGCACAGCCTGGGCGATACCCTGAGCTGGGCGCTGCCCACGCTACTGCGCCAGGGCGAAGCCGCCGAAATGCGCCAGGAACGCTTCTGGCACATAGCCCCGGGCGCCCGCCTGGAAGCCCCGCGCCTCGc                                                                       >  6:52415/1‑149 (MQ=255)                                                                                 gACCGCCCAGTACTACCAGCACAGCCTGGGCGATACCCTGAGCTGGGCGCTGCCCACGCTACTGCGCCAGGGCGAAGCCGCCGAAATGCGCCAGGAACGCTTCTGGCACATAGCCCCGGGCGCCCGCCTGGAAGACCCGCGCATCGccc                                                                     >  2:163319/1‑149 (MQ=255)                                                                                      cccAGTACTACCAGCACAGCCTGGGCGATACCCTGAGCTGGGCGCTGCCCACGCTACTGCGCCAGGGCGAAGCCGCCGAAATGCGCCAGGAACGCTTCTGGCACATAGCCCCGGGCGCCCGCCTGGAAGACCCGCGCATCGCCcgcgcg                                                                >  6:160755/1‑149 (MQ=255)                                                                                       ccAGTACTACCAGCACAGCCTGGGCGATACCCTGAGCTGGGCGCTGCCCACGCTACTGCGCCAGGGCGAAGCCGCCGAAATGCGCCAGGAACGCTTCTGGCACATAGCCCCGGGCGCCCGCCTGGAAGACCCGCGCATCGCCCgcgcgc                                                               >  4:42496/1‑149 (MQ=255)                                                                                                ccAGCACAGCCTGGGCGATACCCTGAGCTGGGCGCTGCCCACGCTACTGCGCCAGGGCGAAGCCGCCGAAATGCGCCAGGAACGCTTCTGGCACATAGCCCCGGGCGCCCGCCTGGaa                                                                                     <  8:185346/118‑1 (MQ=255)                                                                                                ccAGCACAGCCTGGGCGATACCCTGAGCTGGGCGCTGCCCACGCTACTGCGCCAGGGCGAAGCCGCCGAAATGCGCCAGGAACGCTTCTGGCACATAGCCCCGGGCGCCCGCCTGGaa                                                                                     >  7:185346/1‑118 (MQ=255)                                                                                                ccAGCACAGCCTGGGCGATACCCTGAGCTGGGCGCTGCCCACGCTACTGCGCCAGGGCGAAGCCGCCGAAATGCGCCAGGAACGCTTCTGGCACATAGCCCCGGGCGCCCGCCTGGAAGACCCGCGCATc                                                                         >  1:313840/1‑130 (MQ=255)                                                                                                ccAGCACAGCCTGGGCGATACCCTGAGCTGGGCGCTGCCCACGCTACTGCGCCAGGGCGAAGCCGCCGAAATGCGCCAGGAACGCTTCTGGCACATAGCCCCGGGCGCCCGCCTGGAAGACCCGCGCATc                                                                         <  2:313840/130‑1 (MQ=255)                                                                                                ccAGCACAGCCTGGGCGATACCCTGAGCTGGGCGCTGCCCACGCTACTGCGCCAGGGCGAAGCCGCCGAAATGCGCCAGGAACGCTTCTGGCACATAGCCCCGGGCGCCCGCCTGGAAGACCCGCGCATCGCCCGCGCGCCGCGCCa                                                        <  7:171799/147‑1 (MQ=255)                                                                                                ccAGCACAGCCTGGGCGATACCCTGAGCTGGGCGCTGCCCACGCTACTGCGCCAGGGCGAAGCCGCCGAAATGCGCCAGGAACGCTTCTGGCACATAGCCCCGGGCGCCCGCCTGGAAGACCCGCGCATCGCCCGCGCGCCGCGCCAgc                                                      >  7:73548/1‑149 (MQ=255)                                                                                                 cAGCACAGCCTGGGCGATACCCTGAGCTGGGCGCTGCCCACGCTACTGCGCCAGGGCGAAGCCGCCGAAATGCGCCAGGAACGCTTCTGGCACATAGCCCCGGGCGCCCGCCTGGAAGACCCGCGCATCGCCCGCGCGCCGCGCCAgcg                                                     >  1:10262/1‑149 (MQ=255)                                                                                                 cAGCACAGCCTGGGCGATACCCTGAGCTGGGCGCTGCCCACGCTACTGCGCCAGGGCGAAGCCGCCGAAATGCGCCAGGAACGCTTCTGGCACATAGCCCCGGGCGCCCGCCTGGAAGACCCGCGCATCGCCCGCGCGCCGCGCCAgcg                                                     >  6:116092/1‑149 (MQ=255)                                                                                                  aGCACAGCCTGGGCGATACCCTGAGCTGGGCGCTGCCCACGCTACTGCGCCAGGGCGAAGCCGCCGAAATGCGCCAGGAACGCTTCTGGCACATAGCCCCGGGCGCCCGCCTGGAAGACCCGCGCATCGCCCGCGCGCCGCGCCAgcgc                                                    <  4:211001/149‑1 (MQ=255)                                                                                                       aGCCTGGGCGATACCCTGAGCTGGGCGCTGCCCACGCTACTGCGCCAGGGCGAAGCCGCCGAAATGCGCCAGGAACGCTTCTGGCACATAGCCCCGGGCGCCCGCCTGGAAGACCCGCGCATCGCCCGCGCGCCGCGCCAGCGCGACGc                                               <  3:50394/149‑1 (MQ=255)                                                                                                          cTGGGCGATACCCTGAGCTGGGCGCTGCCCACGCTACTGCGCCAGGGCGAAGCCGCCGAAATGCGCCAGGAACGCTTCTGGCACATAGCCCCGGGCGCCCGCCTGGAAGACCCGCGCATCGCCCGCCCGCCGCGCCAGCGCGACGCCCt                                            >  4:61809/1‑149 (MQ=255)                                                                                                           tGGGCGATACCCTGAGCTGGGCGCTGCCCACGCTACTGCGCCAGGGCGAAGCCGCCGAAATGCGCCAGGAACGCTTCTGGCACATAGCCCCGGGCGCCCGCCTGGAAGACCCGCGCATCGCCCGCGCGCCGCGCCAGCGCGACGCCCt                                            >  4:106929/1‑148 (MQ=255)                                                                                                           tGGGCGATACCCTGAGCTGGGCGCTGCCCACGCTACTGCGCCAGGGCGAAGCCGCCGAAATGCGCCAGGAACGCTTCTGGCACATAGCCCCGGGCGCCCGCCTGGAAGACCCGCGCATCGCCCGCGCGCCGCGCCAGCGCGACGCCCt                                            >  1:237843/1‑148 (MQ=255)                                                                                                             ggCGATACCCTGAGCTGGGCGCTGCCCACGCTACTGCGCCAGGGCGAAGCCGCCGAAATGCGCCAGGAACGCTTCTGGCACATAGCCCCGGGCGCCCGCCTGGAAGACCCGCGCATCGCCCGCGCGCCGCGCCAGCGCGACGCCCTc                                           <  8:73548/147‑1 (MQ=255)                                                                                                             ggCGATACCCTGAGCTGGGCGCTGCCCACGCTACTGCGCCAGGGCGAAGCCGCCGAAATGCGCCAGGAACGCTTCTGGCACATAGCCCCGGGCGCCCGCCTGGAAGACCCGCGCATCGCCCGCGCGCCGCGCCAGCGCGACGCCCTCa                                          <  5:24737/148‑1 (MQ=255)                                                                                                                    cccTGAGCTGGGCGCTGCCCACGCTACTGCGCCAGGGCGAAGCCGCCGAAATGCGCCAGGAACGCTTCTGGCACATAGCCCCGGGCGCCCGCCTGGAAGACCCGCGCATCGCCCGCGCGCCGCGCCAGCGCGACGCCCTCAAGACCCt                                   <  1:355680/148‑1 (MQ=255)                                                                                                                    cccTGAGCTGGGCGCTGCCCACGCTACTGCGCCAGGGCGAAGCCGCCGAAATGCGCCAGGAACGCTTCTGGCACATAGCCCCGGGCGCCCGCCTGGAAGACCCGCGCATCGCCCGCGCGCCGCGCCAGCGCGACGCCCTCAAGACCCt                                   <  8:90714/148‑1 (MQ=255)                                                                                                                     ccTGAGCTGGGCGCTGCCCACGCTACTGCGCCAGGGCGAAGCCGCCGAAATGCGCCAGGAACGCTTCTGGCACATAGCCCCGGGCGCCCGCCTGGAAGACCCGCGCATCGCCCGCGCGCCGCGCCAGCGCGACGCCCTCAAGACCCTgg                                 >  7:137611/1‑149 (MQ=255)                                                                                                                     ccTGAGCTGGGCGCTGCCCACGCTACTGCGCCAGGGCGAAGCCGCCGAAATGCGCCAGGAACGCTTCTGGCACATAGCCCCGGGCGCCCGCCTGGAAGACCCGCGCATCGCCCGCGCGCCGCGCCAGCGCGACGCCCTCAAGACCCTgg                                 >  1:330447/1‑149 (MQ=255)                                                                                                                     ccTGAGCTGGGCGCTGCCCACGCTACTGCGCCAGGGCGAAGCCGCCGAAATGCGCCAGGAACGCTTCTGGCACATAGCCCCGGGCGCCCGCCTGGAAGACCCGCGCATCGCCCGCGCGCCGCGCCAGCGCGACGCCCTCAAGACCCTgg                                 <  4:352761/149‑1 (MQ=255)                                                                                                                     ccTGAGCTGGGCGCTGCCCACGCTACTGCGCCAGGGCGAAGCCGCCGAAATGCGCCAGGAACGCTTCTGGCACATAGCCCCGGGCGCCCGCCTGGAAGACCCGCGCATCGCCCGCGCGCCGCGCCAGCGCGACGCCCTCAAGACCCTgg                                 >  1:178761/1‑149 (MQ=255)                                                                                                                     ccTGAGCTGGGCGCTGCCCACGCTACTGCGCCAGGGCGAAGCCGCCGAAATGCGCCAGGAACGCTTCTGGCACATAGCCCCGGGCGCCCGCCTGGAAGACCCGCGCATCGCCCGCGCGCCGCGCCAGCGCGACGCCCTCAAGACCCTgg                                 >  6:64684/1‑149 (MQ=255)                                                                                                                     ccTGAGCTGGGCGCTGCCCACGCTACTGCGCCAGGGCGAAGCCGCCGAAATGCGCCAGGAACGCTTCTGGCACATAGCCCCGGGCGCCCGCCTGGAAGACCCGCGCATCGCCCGCGCGCCGCGCCAGCGCGACGCCCTCAAGACCCTgg                                 <  8:54084/149‑1 (MQ=255)                                                                                                                     ccTGAGCTGGGCGCTGCCCACGCTACTGCGCCAGGGCGAAGCCGCCGAAATGCGCCAGGAACGCTTCTGGCACATAGCCCCGGGCGCCCGCCTGGAAGACCCGCGCATCGCCCGCGCGCCGCGCCAGCGCGACGCCCTCAAGACCCTgg                                 >  2:304591/1‑149 (MQ=255)                                                                                                                      cTGAGCTGGGCGCTGCCCACGCTACTGCGCCAGGGCGAAGCCGCCGAAATGCGCCAGGAACGCTTCTGGCACATAGCCCCGGGCGCCCGCCTGGAAGACCCGCGCATCGCCCGCGCGCCGCGCCAGCGCGACGCCCTCAAGACCCTGGc                                <  2:307134/149‑1 (MQ=255)                                                                                                                       tGAGCTGGGCGCTGCCCACGCTACTGCGCCAGGGCGAAGCCGCCGAAATGCGCCATGAACGCTTCTGGCACATAGCCCCGGGCGCCCGCCTGGAAGACCCGCGCATCGCCCGCGCGCCGCGCCAGCGCGACGCCCTCAAGACCCTGGcc                               >  8:333247/1‑149 (MQ=255)                                                                                                                       tGAGCTGGGCGCTGCCCACGCTACTGCGCCAGGGCGAAGCCGCCGAAATGCGCCAGGAACGCTTCTGGCACATAGCCCCGGGCGCCCGCCTGGAAGACCCGCGCATCGCCCGCGCGCCGCGCCAGCGCGACGCCCTCAAGACCCTGGcc                               >  7:221098/1‑149 (MQ=255)                                                                                                                         aGCTGGGCGCTGCCCACGCTACTGCGCCAGGGCGAAGCCGCCGAAATGCGCCAGGAACGCTTCTGGCACATAGCCCCGGGCGCCCGCCTGGAAGACCCGCGCATCGCCCGCGCGCCGCGCCAGCGCGACGCCCTCAAGACCCTGGccc                              <  2:221083/148‑1 (MQ=255)                                                                                                                            tGGGCGCTGCCCACGCTACTGCGCCAGGGCGAAGCCGCCGAAATGCGCCAGGAACGCTTCTGGCACATAGCCCCGGGCGCCCGCCTGGAAGACCCGCGCATCGCCCGCGCGCCGCGCCAGCGCGACGCCCTCAAGACCCTGGCCCAGc                           >  7:312987/1‑148 (MQ=255)                                                                                                                              ggCGCTGCCCACGCTACTGCGCCAGGGCGAAGCCGCCGAAATGCGCCAGGAACGCTTCTGGCACATAGCCCCGGGCGCCCGCCTGGAAGACCCGCGCATCGCCCGCGCGCCGCGCCAGCGCGACGCCCTCAAGACCCTGGCCCAGc                           <  8:312987/146‑1 (MQ=255)                                                                                                                              ggCGCTGCCCACGCTACTGCGCCAGGGCGAAGCCGCCGAAATGCGCCAGGAACGCTTCTGGCACATAGCCCCGGGCGCCCGCCTGGAAGACCCGCGCATCGCCCGCGCGCCGCGCCAGCGCGACGCCCTCAAGACCCTGGCCCAGCAcc                        >  6:108033/1‑149 (MQ=255)                                                                                                                               gcgcTGCCCACGCTACTGCGCCAGGGCGAAGCCGCCGAAATGCGCCAGGAACGCTTCTGGCACATAGCCCCGGGCGCCCGCCTGGAAGACCCGCGCATCGCCCGcgcgccgc                                                            >  3:269206/1‑112 (MQ=255)                                                                                                                               gcgcTGCCCACGCTACTGCGCCAGGGCGAAGCCGCCGAAATGCGCCAGGAACGCTTCTGGCACATAGCCCCGGGCGCCCGCCTGGAAGACCCGCGCATCGCCCGcgcgccgc                                                            <  4:269206/112‑1 (MQ=255)                                                                                                                                cgcTGCCCACGCTACTGCGCCAGGGCGAAGCCGCCGAAATGCGCCAGGAACGCTTCTGGCACATAGCCCCGGGCGCCCGCCTGGAAGACCCGCGCATCGCCCGCGCGCCGCGCCAGCGCGACGCCCTCAAGACCCTGGCCCAGCACCCg                      >  6:344627/1‑149 (MQ=255)                                                                                                                                     cccACGCTACTGCGCCAGGGCGAAGCCGCCGAAATGCGCCAGGAACGCTTCTGGCACATAGCCCCGGGCGCCCGCCTGGAAGACCCGCGCATCGCCCGCGCGCCGCGCCAGCGCGACGCCCTCAAGACCCTGGCCCAGCCCCCGCACgg                 >  7:194547/1‑149 (MQ=255)                                                                                                                                     cccACGCTACTGCGCCAGGGCGAAGCCGCCGAAATGCGCCAGGAACGCTTCTGGCACATAGCCCCGGGCGCCCGCCTGGAAGACCCGCGCATCGCCCGCGCGCCGCGCCAGCGCGACGCCCTCAAGACCCTGGCCCAGCACCCGCACgg                 >  2:345342/1‑149 (MQ=255)                                                                                                                                      ccACGCTACTGCGCCAGGGCGAAGCCGCCGAAATGCGCCAGGAACGCTTCTGGCACATAGCCCCGGGCGCCCGCCTGGAAGACCCGCGCATCGCCCGCGCGCCGCGCCAGCGCGACGCCCTCAAGACCCTGGCCCAGCACCCGCACGGc                <  3:106929/149‑1 (MQ=255)                                                                                                                                       cACGCTACTGCGCCAGGGCGAAGCCGCCGAAATGCGCCAGGAACGCTTCTGGCACATAGCCCCGGGCGCCCGCCTGGAAGACCCGCGCATCGCCCGCGCGCCGCGCCAGCGCGACGCCCTCAAGACCCTGGCCCAGCACCCGCACGGCg               >  2:222420/1‑149 (MQ=255)                                                                                                                                       cACGCTACTGCGCCAGGGCGAAGCCGCCGAAATGCGCCAGGAACGCTTCTGGCACATAGCCCCGGGCGCCCGCCTGGAAGACCCGCGCATCGCCCGCGCGCCGCGCCAGCGCGACGCCCTCAAGACCCTGGCCCAGCACCCGCACGGCg               >  5:70889/1‑149 (MQ=255)                                                                                                                                        aCGCTACTGCGCCAGGGCGAAGCCGCCGAAATGCGCCAGGAACGCTTCTGGCACATAGCCCCGGGCGCCCGCCTGGAAGACCCGCGCATCGCCCGCGCGCCGCGCCAGCGCGACGCCCTCAAGACCCTGGCCCAGCACCCGCACGGCGt              >  5:238370/1‑149 (MQ=255)                                                                                                                                          gCTACTGCGCCAGGGCGAAGCCGCCGAAATGCGCCAGGAACGCTTCTGGCACATAGCCCCGGGCGCCCGCCTGGAAGACCCGCGCATCGCCCGCGCGCCGCGCCAGCGCGACGCCCTCAAGACCCTGGCCCAGCACCCGCACGGCGTgg            <  2:10262/149‑1 (MQ=255)                                                                                                                                            tACTGCGCCAGGGCGAAGCCGCCGAAATGCGCCAGGAACGCTTCTGGCACATAGCCCCGggcgcagtagcgtgggcagcgcccagctcagggtatcgcccaggctgtgctggtagtactgggcggtccacaggcacaacttgaacagc           <  6:88483‑M2/148‑90 (MQ=255)                                                                                                                                              cTGCGCCAGGGCGAAGCCGCCGAAATGCGCCAGGAACGCTTCTGGCACATAGCCCCGggcgcagtagcgtgggcagcgcccagctcagggtatcgcccaggctgtgctggtagtactgggcggtccacaggcacaacttgaacagcgac        <  2:214740‑M2/149‑93 (MQ=255)                                                                                                                                              cTGCGCCAGGGCGAAGCCGCCGAAATGCGCCAGGAACGCTTCTGGCACATAGCCCCGGGCGCCCGCCTGGAAGACCCGCGCATCGCCCGCGCGCCGCGCCAGCGCGACGCCCTCAAGACCCTGGCCCAGCACCCGCACGGCGTGGcc          <  3:229381/147‑1 (MQ=255)                                                                                                                                                 cgcCcggggctatgtgccagaagcgttcctggcgcatttcggcggcttcgccctggcgcagtagcgtgggcagcgcccagctcagggtatcgcccaggctgtgctggtagtactgggcggtccacaggcacaacttgaacagcgacgcg     <  4:140145‑M1/149‑146 (MQ=255)                                                                                                                                                  gcCcggggctatgtgccagaagcgttcctggcgcatttcggcggcttcgccctggcgcagtagcgtgggcagcgcccagctcagggtatcgcccaggctgtgctggtagtactgggcggtccacaggcacaacttgaacagcgacgcgg    <  7:54084‑M1/149‑147 (MQ=255)                                                                                                                                                  gcCcggggctatgtgccagaagcgttcctggcgcatttcggcggcttcgccctggcgcagtagcgtgggcagcgcccagctcagggtatcgcccaggctgtgctggtagtactgggcggtccacaggcacaacttgaacagcgacgcgg    <  2:355680‑M1/149‑147 (MQ=255)                                                                                                                                                   cccggggctatgtgccagaagcgttcctggcgcatttcggcggcttcgccctggcgcagtagcgtgggcagcgcccagctcagggtatcgcccaggctgtgctggtagtactgggcggtccacaggcacaacttgaacagcgccgcggg   >  8:147459‑M1/1‑2 (MQ=255)                                                                                                                                                    ccggggctatgtgccagaagcgttcctggcgcatttcggcggcttcgccctggcgcagtagcgtgggcagcgcccagctcagggtatcgcccaggctgtgctggtagtactgggcggtccacaggcacaacttgaacagcgacgcgggg  >  3:214683‑M1/1‑1 (MQ=255)                                                                                                                                                    |                                                                                                                                                     CGACAAACTGAAGCCTGCCAGCGCCCTGCTCGA‑CCCGGTGTCCCCCATCCCCGCGTCGCTGTTCAAGTTGTG‑CCTGTGGACCGCCCAGTACTACCAGCACAGCCTGGGCGATACCCTGAGCTGGGCGCTGCCCACGCTACTGCGCCAGGGCGAAGCCGCCGAAATGCGCCAGGAACGCTTCTGGCACATAGCCCCGGGCGCCCGCCTGGAAGACCCGCGCATCGCCCGCGCGCCGCGCCAGCGCGACGCCCTCAAGACCCTGGCCCAGCACCCGCACGGCGTGGCCCACAGCCT  >  NC_002947/5810855‑5811148

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.