New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5811000	74 (1.230)	4 (0.070)	4/254	NT	5.0%	coding (328/2220 nt)	priA	primosome assembly protein
	?	NC_002947	= 5811050	80 (1.380)					coding (378/2220 nt)	priA	primosome assembly protein

CCCCGCGTCGCTGTTCAAGTTGTGCCTGTGGACCGCCCAGTACTACCAGCACAGCCTGGGCGATACCCTGAGCTGGGCGCTGCCCACGCTACTGCGCCAGGGCGAAGCCGCCGAAATGCGCCAGGAACGCTTCTGGCACATAGCCCCGGGCGCCCGCCTGGAAGACCCGCGCATCGCCCGCGCGCCGCGCCAGCGCGACGCCCTCAAGACCCTGGCCCAGCACCCGCACGGCGTGGCCCACAGCCTGCTGGCCAAACTCAACCTGAACAAGGACAGCCTCGACCTGCTGCTGGC  >  NC_002947/5810903‑5811196                                                                                                                                                    |                                                                                                                                                   ccccGCGTCGCTGTTCAAGTTGTGCCTGTGGACCGCCCAGTACTACCAGCACAGCCTGGGCGATACCCTGAGCTGGGCGCTGCCCACGCTACTGCGCCAGGGCGAAGCCGCCGAAATGCGCCAGGAACGCTTCTGGCACATAGCCCCGg                                                                                                                                                   >  3:214683‑M2/1‑148 (MQ=255)  cccGCGGCGCTGTTCAAGTTGTGCCTGTGGACCGCCCAGTACTACCAGCACAGCCTGGGCGATACCCTGAGCTGGGCGCTGCCCACGCTACTGCGCCAGGGCGAAGCCGCCGAAATGCGCCAGGAACGCTTCTGGCACATAGCCCCGgg                                                                                                                                                  >  8:147459‑M2/1‑147 (MQ=255)   ccGCGTCGCTGTTCAAGTTGTGCCTGTGGACCGCCCAGTACTACCAGCACAGCCTGGGCGATACCCTGAGCTGGGCGCTGCCCACGCTACTGCGCCAGGGCGAAGCCGCCGAAATGCGCCAGGAACGCTTCTGGCACATAGCCCCGggc                                                                                                                                                 <  2:355680‑M2/149‑4 (MQ=255)   ccGCGTCGCTGTTCAAGTTGTGCCTGTGGACCGCCCAGTACTACCAGCACAGCCTGGGCGATACCCTGAGCTGGGCGCTGCCCACGCTACTGCGCCAGGGCGAAGCCGCCGAAATGCGCCAGGAACGCTTCTGGCACATAGCCCCGggc                                                                                                                                                 <  7:54084‑M2/149‑4 (MQ=255)    cgcgTCGCTGTTCAAGTTGTGCCTGTGGACCGCCCAGTACTACCAGCACAGCCTGGGCGATACCCTGAGCTGGGCGCTGCCCACGCTACTGCGCCAGGGCGAAGCCGCCGAAATGCGCCAGGAACGCTTCTGGCACATAGCCCCGggcg                                                                                                                                                <  4:140145‑M2/149‑5 (MQ=255)             gTTCAAGTTGTGCCTGTGGACCGCCCAGTACTACCAGCACAGCCTGGGCGATACCCTGAGCTGGGCGCTGCCCACGCTACTGCGCCAGGGCGAAGCCGCCGAAATGCGCCAGGAACGCTTCTGGCACATAGCCCCGGGCGCCCGCCTg                                                                                                                                        >  7:90714/1‑148 (MQ=255)              ttCAAGTTGTGCCTGTGGACCGCCCAGTACTACCAGCACAGCCTGGGCGATACCCTGAGCTGGGCGCTGCCCACGCTACTGCGCCAGGGCGAAGCCGCCGAAATGCGCCAGGAACGCTTCTGGCACATAGCCCCGGGCGCCCGCCTgg                                                                                                                                       >  8:218570/1‑148 (MQ=255)              ttCAAGTTGTGCCTGTGGACCGCCCAGTACTACCAGCACAGCCTGGGCGATACCCTGAGCTGGGCGCTGCCCACGCTACTGCGCCAGGGCGAAGCCGCCGAAATGCGCCAGGAACGCTTCTGGCACATAGCCCCGGGCGCCCGCCTgg                                                                                                                                       <  8:9664/148‑1 (MQ=255)                cAAGTTGTGCCTGTGGACCGCCCAGTACTACCAGCACAGCCTGGGCGATACCCTGAGCTGGGCGCTGCCCACGCTACTGCGCCAGGGCGAAGCCGCCGAAATGCGCCAGGAACGCTTCTGGCACATAGCCCCGGGCGCCCGCCTgg                                                                                                                                       >  6:125972/1‑146 (MQ=255)                cAAGTTGTGCCTGTGGACCGCCCAGTACTACCAGCACAGCCTGGGCGATACCCTGAGCTGGGCGCTGCCCACGCTACTGCGCCAGGGCGAAGCCGCCGAAATGCGCCAGGAACGCTTCTGGCACATAGCCCCGGGCGCCCGCCTgg                                                                                                                                       >  3:352761/1‑146 (MQ=255)                  aGTTGTGCCTGTGGACCGCCCAGTACTACCAGCACAGCCTGGGCGATACCCTGAGCTGGGCGCTGCCCACGCTACTGCGCCAGGGCGAAGCCGCCGAAATGCGCCAGGAACGCTTCTGGCACATAGCCCCGGGCGCCCGCCTGGAAGAc                                                                                                                                  <  3:7139/149‑1 (MQ=255)                         ccTGTGGACCGCCCAGTACTACCAGCACAGCCTGGGCGATACCCTGAGCTGGGCGCTGCCCACGCTACTGCGCCAGGGCGAAGCCGCCGAAATGCGCCAGGAACGCTTCTGGCACATAGCCCCGGGCGCCCGCCTGGAAGACCCGCGCa                                                                                                                           <  3:140145/149‑1 (MQ=255)                             tgGACCGCCCAGTACTACCAGCACAGCCTGGGCGATACCCTGAGCTGGGCGCTGCCCACGCTACTGCGCCAGGGCGAAGCCGCCGAAATGCGCCAGGAACGCTTCTGGCACATAGCCCCGGGCGCCCGCCTGGAAGCCCCGCGCCTCGc                                                                                                                       >  6:52415/1‑149 (MQ=255)                               gACCGCCCAGTACTACCAGCACAGCCTGGGCGATACCCTGAGCTGGGCGCTGCCCACGCTACTGCGCCAGGGCGAAGCCGCCGAAATGCGCCAGGAACGCTTCTGGCACATAGCCCCGGGCGCCCGCCTGGAAGACCCGCGCATCGccc                                                                                                                     >  2:163319/1‑149 (MQ=255)                                    cccAGTACTACCAGCACAGCCTGGGCGATACCCTGAGCTGGGCGCTGCCCACGCTACTGCGCCAGGGCGAAGCCGCCGAAATGCGCCAGGAACGCTTCTGGCACATAGCCCCGGGCGCCCGCCTGGAAGACCCGCGCATCGCCcgcgcg                                                                                                                >  6:160755/1‑149 (MQ=255)                                     ccAGTACTACCAGCACAGCCTGGGCGATACCCTGAGCTGGGCGCTGCCCACGCTACTGCGCCAGGGCGAAGCCGCCGAAATGCGCCAGGAACGCTTCTGGCACATAGCCCCGGGCGCCCGCCTGGAAGACCCGCGCATCGCCCgcgcgc                                                                                                               >  4:42496/1‑149 (MQ=255)                                              ccAGCACAGCCTGGGCGATACCCTGAGCTGGGCGCTGCCCACGCTACTGCGCCAGGGCGAAGCCGCCGAAATGCGCCAGGAACGCTTCTGGCACATAGCCCCGGGCGCCCGCCTGGaa                                                                                                                                     >  7:185346/1‑118 (MQ=255)                                              ccAGCACAGCCTGGGCGATACCCTGAGCTGGGCGCTGCCCACGCTACTGCGCCAGGGCGAAGCCGCCGAAATGCGCCAGGAACGCTTCTGGCACATAGCCCCGGGCGCCCGCCTGGaa                                                                                                                                     <  8:185346/118‑1 (MQ=255)                                              ccAGCACAGCCTGGGCGATACCCTGAGCTGGGCGCTGCCCACGCTACTGCGCCAGGGCGAAGCCGCCGAAATGCGCCAGGAACGCTTCTGGCACATAGCCCCGGGCGCCCGCCTGGAAGACCCGCGCATc                                                                                                                         >  1:313840/1‑130 (MQ=255)                                              ccAGCACAGCCTGGGCGATACCCTGAGCTGGGCGCTGCCCACGCTACTGCGCCAGGGCGAAGCCGCCGAAATGCGCCAGGAACGCTTCTGGCACATAGCCCCGGGCGCCCGCCTGGAAGACCCGCGCATc                                                                                                                         <  2:313840/130‑1 (MQ=255)                                              ccAGCACAGCCTGGGCGATACCCTGAGCTGGGCGCTGCCCACGCTACTGCGCCAGGGCGAAGCCGCCGAAATGCGCCAGGAACGCTTCTGGCACATAGCCCCGGGCGCCCGCCTGGAAGACCCGCGCATCGCCCGCGCGCCGCGCCa                                                                                                        <  7:171799/147‑1 (MQ=255)                                              ccAGCACAGCCTGGGCGATACCCTGAGCTGGGCGCTGCCCACGCTACTGCGCCAGGGCGAAGCCGCCGAAATGCGCCAGGAACGCTTCTGGCACATAGCCCCGGGCGCCCGCCTGGAAGACCCGCGCATCGCCCGCGCGCCGCGCCAgc                                                                                                      >  7:73548/1‑149 (MQ=255)                                               cAGCACAGCCTGGGCGATACCCTGAGCTGGGCGCTGCCCACGCTACTGCGCCAGGGCGAAGCCGCCGAAATGCGCCAGGAACGCTTCTGGCACATAGCCCCGGGCGCCCGCCTGGAAGACCCGCGCATCGCCCGCGCGCCGCGCCAgcg                                                                                                     >  1:10262/1‑149 (MQ=255)                                               cAGCACAGCCTGGGCGATACCCTGAGCTGGGCGCTGCCCACGCTACTGCGCCAGGGCGAAGCCGCCGAAATGCGCCAGGAACGCTTCTGGCACATAGCCCCGGGCGCCCGCCTGGAAGACCCGCGCATCGCCCGCGCGCCGCGCCAgcg                                                                                                     >  6:116092/1‑149 (MQ=255)                                                aGCACAGCCTGGGCGATACCCTGAGCTGGGCGCTGCCCACGCTACTGCGCCAGGGCGAAGCCGCCGAAATGCGCCAGGAACGCTTCTGGCACATAGCCCCGGGCGCCCGCCTGGAAGACCCGCGCATCGCCCGCGCGCCGCGCCAgcgc                                                                                                    <  4:211001/149‑1 (MQ=255)                                                     aGCCTGGGCGATACCCTGAGCTGGGCGCTGCCCACGCTACTGCGCCAGGGCGAAGCCGCCGAAATGCGCCAGGAACGCTTCTGGCACATAGCCCCGGGCGCCCGCCTGGAAGACCCGCGCATCGCCCGCGCGCCGCGCCAGCGCGACGc                                                                                               <  3:50394/149‑1 (MQ=255)                                                        cTGGGCGATACCCTGAGCTGGGCGCTGCCCACGCTACTGCGCCAGGGCGAAGCCGCCGAAATGCGCCAGGAACGCTTCTGGCACATAGCCCCGGGCGCCCGCCTGGAAGACCCGCGCATCGCCCGCCCGCCGCGCCAGCGCGACGCCCt                                                                                            >  4:61809/1‑149 (MQ=255)                                                         tGGGCGATACCCTGAGCTGGGCGCTGCCCACGCTACTGCGCCAGGGCGAAGCCGCCGAAATGCGCCAGGAACGCTTCTGGCACATAGCCCCGGGCGCCCGCCTGGAAGACCCGCGCATCGCCCGCGCGCCGCGCCAGCGCGACGCCCt                                                                                            >  4:106929/1‑148 (MQ=255)                                                         tGGGCGATACCCTGAGCTGGGCGCTGCCCACGCTACTGCGCCAGGGCGAAGCCGCCGAAATGCGCCAGGAACGCTTCTGGCACATAGCCCCGGGCGCCCGCCTGGAAGACCCGCGCATCGCCCGCGCGCCGCGCCAGCGCGACGCCCt                                                                                            >  1:237843/1‑148 (MQ=255)                                                           ggCGATACCCTGAGCTGGGCGCTGCCCACGCTACTGCGCCAGGGCGAAGCCGCCGAAATGCGCCAGGAACGCTTCTGGCACATAGCCCCGGGCGCCCGCCTGGAAGACCCGCGCATCGCCCGCGCGCCGCGCCAGCGCGACGCCCTc                                                                                           <  8:73548/147‑1 (MQ=255)                                                           ggCGATACCCTGAGCTGGGCGCTGCCCACGCTACTGCGCCAGGGCGAAGCCGCCGAAATGCGCCAGGAACGCTTCTGGCACATAGCCCCGGGCGCCCGCCTGGAAGACCCGCGCATCGCCCGCGCGCCGCGCCAGCGCGACGCCCTCa                                                                                          <  5:24737/148‑1 (MQ=255)                                                                  cccTGAGCTGGGCGCTGCCCACGCTACTGCGCCAGGGCGAAGCCGCCGAAATGCGCCAGGAACGCTTCTGGCACATAGCCCCGGGCGCCCGCCTGGAAGACCCGCGCATCGCCCGCGCGCCGCGCCAGCGCGACGCCCTCAAGACCCt                                                                                   <  8:90714/148‑1 (MQ=255)                                                                  cccTGAGCTGGGCGCTGCCCACGCTACTGCGCCAGGGCGAAGCCGCCGAAATGCGCCAGGAACGCTTCTGGCACATAGCCCCGGGCGCCCGCCTGGAAGACCCGCGCATCGCCCGCGCGCCGCGCCAGCGCGACGCCCTCAAGACCCt                                                                                   <  1:355680/148‑1 (MQ=255)                                                                   ccTGAGCTGGGCGCTGCCCACGCTACTGCGCCAGGGCGAAGCCGCCGAAATGCGCCAGGAACGCTTCTGGCACATAGCCCCGGGCGCCCGCCTGGAAGACCCGCGCATCGCCCGCGCGCCGCGCCAGCGCGACGCCCTCAAGACCCTgg                                                                                 >  1:330447/1‑149 (MQ=255)                                                                   ccTGAGCTGGGCGCTGCCCACGCTACTGCGCCAGGGCGAAGCCGCCGAAATGCGCCAGGAACGCTTCTGGCACATAGCCCCGGGCGCCCGCCTGGAAGACCCGCGCATCGCCCGCGCGCCGCGCCAGCGCGACGCCCTCAAGACCCTgg                                                                                 <  8:54084/149‑1 (MQ=255)                                                                   ccTGAGCTGGGCGCTGCCCACGCTACTGCGCCAGGGCGAAGCCGCCGAAATGCGCCAGGAACGCTTCTGGCACATAGCCCCGGGCGCCCGCCTGGAAGACCCGCGCATCGCCCGCGCGCCGCGCCAGCGCGACGCCCTCAAGACCCTgg                                                                                 >  1:178761/1‑149 (MQ=255)                                                                   ccTGAGCTGGGCGCTGCCCACGCTACTGCGCCAGGGCGAAGCCGCCGAAATGCGCCAGGAACGCTTCTGGCACATAGCCCCGGGCGCCCGCCTGGAAGACCCGCGCATCGCCCGCGCGCCGCGCCAGCGCGACGCCCTCAAGACCCTgg                                                                                 >  2:304591/1‑149 (MQ=255)                                                                   ccTGAGCTGGGCGCTGCCCACGCTACTGCGCCAGGGCGAAGCCGCCGAAATGCGCCAGGAACGCTTCTGGCACATAGCCCCGGGCGCCCGCCTGGAAGACCCGCGCATCGCCCGCGCGCCGCGCCAGCGCGACGCCCTCAAGACCCTgg                                                                                 >  6:64684/1‑149 (MQ=255)                                                                   ccTGAGCTGGGCGCTGCCCACGCTACTGCGCCAGGGCGAAGCCGCCGAAATGCGCCAGGAACGCTTCTGGCACATAGCCCCGGGCGCCCGCCTGGAAGACCCGCGCATCGCCCGCGCGCCGCGCCAGCGCGACGCCCTCAAGACCCTgg                                                                                 <  4:352761/149‑1 (MQ=255)                                                                   ccTGAGCTGGGCGCTGCCCACGCTACTGCGCCAGGGCGAAGCCGCCGAAATGCGCCAGGAACGCTTCTGGCACATAGCCCCGGGCGCCCGCCTGGAAGACCCGCGCATCGCCCGCGCGCCGCGCCAGCGCGACGCCCTCAAGACCCTgg                                                                                 >  7:137611/1‑149 (MQ=255)                                                                    cTGAGCTGGGCGCTGCCCACGCTACTGCGCCAGGGCGAAGCCGCCGAAATGCGCCAGGAACGCTTCTGGCACATAGCCCCGGGCGCCCGCCTGGAAGACCCGCGCATCGCCCGCGCGCCGCGCCAGCGCGACGCCCTCAAGACCCTGGc                                                                                <  2:307134/149‑1 (MQ=255)                                                                     tGAGCTGGGCGCTGCCCACGCTACTGCGCCAGGGCGAAGCCGCCGAAATGCGCCATGAACGCTTCTGGCACATAGCCCCGGGCGCCCGCCTGGAAGACCCGCGCATCGCCCGCGCGCCGCGCCAGCGCGACGCCCTCAAGACCCTGGcc                                                                               >  8:333247/1‑149 (MQ=255)                                                                     tGAGCTGGGCGCTGCCCACGCTACTGCGCCAGGGCGAAGCCGCCGAAATGCGCCAGGAACGCTTCTGGCACATAGCCCCGGGCGCCCGCCTGGAAGACCCGCGCATCGCCCGCGCGCCGCGCCAGCGCGACGCCCTCAAGACCCTGGcc                                                                               >  7:221098/1‑149 (MQ=255)                                                                       aGCTGGGCGCTGCCCACGCTACTGCGCCAGGGCGAAGCCGCCGAAATGCGCCAGGAACGCTTCTGGCACATAGCCCCGGGCGCCCGCCTGGAAGACCCGCGCATCGCCCGCGCGCCGCGCCAGCGCGACGCCCTCAAGACCCTGGccc                                                                              <  2:221083/148‑1 (MQ=255)                                                                          tGGGCGCTGCCCACGCTACTGCGCCAGGGCGAAGCCGCCGAAATGCGCCAGGAACGCTTCTGGCACATAGCCCCGGGCGCCCGCCTGGAAGACCCGCGCATCGCCCGCGCGCCGCGCCAGCGCGACGCCCTCAAGACCCTGGCCCAGc                                                                           >  7:312987/1‑148 (MQ=255)                                                                            ggCGCTGCCCACGCTACTGCGCCAGGGCGAAGCCGCCGAAATGCGCCAGGAACGCTTCTGGCACATAGCCCCGGGCGCCCGCCTGGAAGACCCGCGCATCGCCCGCGCGCCGCGCCAGCGCGACGCCCTCAAGACCCTGGCCCAGc                                                                           <  8:312987/146‑1 (MQ=255)                                                                            ggCGCTGCCCACGCTACTGCGCCAGGGCGAAGCCGCCGAAATGCGCCAGGAACGCTTCTGGCACATAGCCCCGGGCGCCCGCCTGGAAGACCCGCGCATCGCCCGCGCGCCGCGCCAGCGCGACGCCCTCAAGACCCTGGCCCAGCAcc                                                                        >  6:108033/1‑149 (MQ=255)                                                                             gcgcTGCCCACGCTACTGCGCCAGGGCGAAGCCGCCGAAATGCGCCAGGAACGCTTCTGGCACATAGCCCCGGGCGCCCGCCTGGAAGACCCGCGCATCGCCCGcgcgccgc                                                                                                            >  3:269206/1‑112 (MQ=255)                                                                             gcgcTGCCCACGCTACTGCGCCAGGGCGAAGCCGCCGAAATGCGCCAGGAACGCTTCTGGCACATAGCCCCGGGCGCCCGCCTGGAAGACCCGCGCATCGCCCGcgcgccgc                                                                                                            <  4:269206/112‑1 (MQ=255)                                                                              cgcTGCCCACGCTACTGCGCCAGGGCGAAGCCGCCGAAATGCGCCAGGAACGCTTCTGGCACATAGCCCCGGGCGCCCGCCTGGAAGACCCGCGCATCGCCCGCGCGCCGCGCCAGCGCGACGCCCTCAAGACCCTGGCCCAGCACCCg                                                                      >  6:344627/1‑149 (MQ=255)                                                                                   cccACGCTACTGCGCCAGGGCGAAGCCGCCGAAATGCGCCAGGAACGCTTCTGGCACATAGCCCCGGGCGCCCGCCTGGAAGACCCGCGCATCGCCCGCGCGCCGCGCCAGCGCGACGCCCTCAAGACCCTGGCCCAGCCCCCGCACgg                                                                 >  7:194547/1‑149 (MQ=255)                                                                                   cccACGCTACTGCGCCAGGGCGAAGCCGCCGAAATGCGCCAGGAACGCTTCTGGCACATAGCCCCGGGCGCCCGCCTGGAAGACCCGCGCATCGCCCGCGCGCCGCGCCAGCGCGACGCCCTCAAGACCCTGGCCCAGCACCCGCACgg                                                                 >  2:345342/1‑149 (MQ=255)                                                                                    ccACGCTACTGCGCCAGGGCGAAGCCGCCGAAATGCGCCAGGAACGCTTCTGGCACATAGCCCCGGGCGCCCGCCTGGAAGACCCGCGCATCGCCCGCGCGCCGCGCCAGCGCGACGCCCTCAAGACCCTGGCCCAGCACCCGCACGGc                                                                <  3:106929/149‑1 (MQ=255)                                                                                     cACGCTACTGCGCCAGGGCGAAGCCGCCGAAATGCGCCAGGAACGCTTCTGGCACATAGCCCCGGGCGCCCGCCTGGAAGACCCGCGCATCGCCCGCGCGCCGCGCCAGCGCGACGCCCTCAAGACCCTGGCCCAGCACCCGCACGGCg                                                               >  5:70889/1‑149 (MQ=255)                                                                                     cACGCTACTGCGCCAGGGCGAAGCCGCCGAAATGCGCCAGGAACGCTTCTGGCACATAGCCCCGGGCGCCCGCCTGGAAGACCCGCGCATCGCCCGCGCGCCGCGCCAGCGCGACGCCCTCAAGACCCTGGCCCAGCACCCGCACGGCg                                                               >  2:222420/1‑149 (MQ=255)                                                                                      aCGCTACTGCGCCAGGGCGAAGCCGCCGAAATGCGCCAGGAACGCTTCTGGCACATAGCCCCGGGCGCCCGCCTGGAAGACCCGCGCATCGCCCGCGCGCCGCGCCAGCGCGACGCCCTCAAGACCCTGGCCCAGCACCCGCACGGCGt                                                              >  5:238370/1‑149 (MQ=255)                                                                                        gCTACTGCGCCAGGGCGAAGCCGCCGAAATGCGCCAGGAACGCTTCTGGCACATAGCCCCGGGCGCCCGCCTGGAAGACCCGCGCATCGCCCGCGCGCCGCGCCAGCGCGACGCCCTCAAGACCCTGGCCCAGCACCCGCACGGCGTgg                                                            <  2:10262/149‑1 (MQ=255)                                                                                          tACTGCGCCAGGGCGAAGCCGCCGAAATGCGCCAGGAACGCTTCTGGCACATAGCCCCGggcgcagtagcgtgggcagcgcccagctcagggtatcgcccaggctgtgctggtagtactgggcggtccacaggcacaacttgaacagc                                                           <  6:88483‑M2/148‑90 (MQ=255)                                                                                            cTGCGCCAGGGCGAAGCCGCCGAAATGCGCCAGGAACGCTTCTGGCACATAGCCCCGggcgcagtagcgtgggcagcgcccagctcagggtatcgcccaggctgtgctggtagtactgggcggtccacaggcacaacttgaacagcgac                                                        <  2:214740‑M2/149‑93 (MQ=255)                                                                                            cTGCGCCAGGGCGAAGCCGCCGAAATGCGCCAGGAACGCTTCTGGCACATAGCCCCGGGCGCCCGCCTGGAAGACCCGCGCATCGCCCGCGCGCCGCGCCAGCGCGACGCCCTCAAGACCCTGGCCCAGCACCCGCACGGCGTGGcc                                                          <  3:229381/147‑1 (MQ=255)                                                                                                   aGGGCGAAGCCGCCGAAATGCGCCAGGAACGCTTCTGGCACATAGCCCCGGGCGCCCGCCTGGAAGACCCGCGCATCGCCCGCGCGCCGCGCCAGCGCGACGCCCTCAAGACCCTGGCCCAGCACCCGCACGGCGTGGCCCACAGCctg                                                 <  1:163319/149‑1 (MQ=255)                                                                                                      gCGAAGCCGCCGAAATGCGCCAGGAACGCTTCTGGCACATAGCCCCGGGCGCCCGCCTGGAAGACCCGCGCATCGCCCGCGCGCCGCGCCCGCGCGACGCCCTCAAGACCCTGGCCCAGCACCCGCACGGCGTGGCCCACAGCctgctg                                              >  8:175756/1‑149 (MQ=255)                                                                                                      gCGAAGCCGCCGAAATGCGCCAGGAACGCTTCTGGCACATAGCCCCGGGCGCCCGCCTGGAAGACCCGCGCATCGCCCGCGCGCCGCGCCAGCGCGACGCCCTCAAGACCCTGGCCCAGCACCCGCACGGCGTGGCCCACAGCctgctg                                              >  3:45295/1‑149 (MQ=255)                                                                                                      gCGAAGCCGCCGAAATGCGCCAGGAACGCTTCTGGCACATAGCCCCGGGCGCCCGCCTGGAAGACCCGCGCATCGCCCGCGCGCCGCGCCAGCGCGACGCCCTCAAGACCCTGGCCCAGCACCCGCACGGCGTGGCCCACAGCctgctg                                              <  5:108033/149‑1 (MQ=255)                                                                                                        gAAGCCGCCGAAATGCGCCAGGAACGCTTCTGGCACATAGCCCCGGGCGCCCGCCTGGAAGACCCGCGCATCGCCCGCGCGCCGCGCCAGCGCGACGCCCTCAAGCCCCTGGCCCAGCACCCGCACGGCGTGGCCCACAGCCTGCTGGc                                            >  6:68448/1‑149 (MQ=255)                                                                                                        gAAGCCGCCGAAATGCGCCAGGAACGCTTCTGGCACATAGCCCCGGGCGCCCGCCTGGAAGACCCGCGCATCGCCCGCGCGCCGCGCCAGCGCGACGCCCTCAAGACCCTGGCCCAGCACCCGCACGGCGTGGCCCACAGCCTGCTGGc                                            <  7:218570/149‑1 (MQ=255)                                                                                                            ccgccgAAATGCGCCAGGAACGCTTCTGGCACATAGCCCCGGGCGCCCGCCTGGAAGACCCGCGCATCGCCCGCGCGCCGCGCCAGCGCGACGCCCTCAAGACCCTGGCCCAGCACCCGCACGGCGTGGCCCACAGCCTGCTGGCCaaa                                        <  5:64684/149‑1 (MQ=255)                                                                                                              gccgAAATGCGCCAGGAACGCTTCTGGCACATAGCCCCGGGCGCCCGCCTGGAAGACCCGCGCATCGCCCGCGCGCCGCGCCAGCGCGACGCCCTCAAGACCCTGGCCCAGCACCCGCACGGCGTGGCCCACAGCCTGCTGGCCAAACt                                      >  5:168473/1‑149 (MQ=255)                                                                                                               ccgAAATGCGCCAGGAACGCTTCTGGCACATAGCCCCGGGCGCCCGCCTGGAAGACCCGCGCATCGCCCGCGCGCCGCGCCAGCGCGACGCCCTCAAGACCCTGGCCCAGCACCCGCACGGCGt                                                              <  8:129646/124‑1 (MQ=255)                                                                                                               ccgAAATGCGCCAGGAACGCTTCTGGCACATAGCCCCGGGCGCCCGCCTGGAAGACCCGCGCATCGCCCGCGCGCCGCGCCAGCGCGACGCCCTCAAGACCCTGGCCCAGCACCCGCACGGCGt                                                              >  7:129646/1‑124 (MQ=255)                                                                                                                 gAAATGCGCCAGGAACGCTTCTGGCACATAGCCCCGGGCGCCCGCCTGGAAGACCCGCGCATCGCCCGCGCGCCGCGCCAGCGCGACGCCCTCAAGACCCTGGCCCAGCACCCGCACGGCGTGGCCCACAGCCTGCTGGCCAAACTCaa                                   <  2:330447/149‑1 (MQ=255)                                                                                                                 gAAATGCGCCAGGAACGCTTCTGGCACATAGCCCCGGGCGCCCGCCTGGAAGACCCGCGCATCGCCCGCGCGCCGCGCCAGCGCGACGCCCTCAAGACCCTGGCCCAGCACCCGCACGGCGTGGCCCACAGCCTGCTGGCCAAACTCaa                                   <  1:63291/149‑1 (MQ=255)                                                                                                                  aaaTGCGCCAGGAACGCTTCTGGCACATAGCCCCGggcgcagtagcgtgggcagcgcccagctcagggtatcgcccaggctgtgctggtagtactgggcggtccacaggcacaacttgaacagcgacgcggggatgggggacaccgggt                                  >  5:88483‑M2/1‑35 (MQ=255)                                                                                                                  aaaTGCGCCAGGAACGCTTCTGGCACATAGCCCCGGGCGCCCGCCTGGAAGACCCGCGCATCGCCCGCGCGCCGCGCCAGCGCGACGCCCTCAAGACCCTGGCCCAGCACCCGCACGGCGTGGCCCACAGCCTGCTGGCCAAACTCAAc                                  <  6:70889/149‑1 (MQ=255)                                                                                                                  aaaTGCGCCAGGAACGCTTCTGGCACATAGCCCCGGGCGCCCGCCTGGAAGACCCGCGCATCGCCCGCGCGCCGCGCCAGCGCGACGCCCTCAAGACCCTGGCCCAGCACCCGCACGGCGTGGCCCACAGCCTGCTGGCCAAACTCAAc                                  <  2:158168/149‑1 (MQ=255)                                                                                                                   aaTGCGCCAGGAACGCTTCTGGCACATAGCCCCGGGCGCCCGCCTGGAAGACCCGCGCATCGCCCGCGCGCCGCGCCAGCGCGACGCCCTCAAGACCCTGGCCCAGCACCCGCACGGCGTGGCCCACAGCCTGCTGGCCAAACTCAAcc                                 <  8:221098/149‑1 (MQ=255)                                                                                                                      gcgcCAGGAACGCTTCTGGCACATAGCCCCGGGCGCCCGCCTGGAAGACCCGCGCATCGCCCGCGCGCCGCGCCAGCGCGACGCCCTCAAGACCCTGGCCCAGCACCCGCACGGCGTGGCCCACAGCCTGCTGGCCAAACTCAACCTg                               >  6:176343/1‑148 (MQ=255)                                                                                                                          cAGGAACGCTTCTGGCACATAGCCCCGggcgcagtagcgtgggcagcgcccagctcagggtatcgcccaggctgtgctggtagtactgggcggtccacaggcacaacttgaacagcgacggggggatgggggacaccgggtcgagcagg                          >  1:214740‑M2/1‑27 (MQ=255)                                                                                                                           aGGAACGCTTCTGGCACATAGCCCCGGGCGCCCGCCTGGAAGACCCGCGCATCGCCCGCGCGCCGCGCCAGCGCGACGCCCTCAAGACCCTGGCCCAGCACCCGCACGGCGTGGCCCACAGCCTGCTGGCCAAACTCAACCTGAACAAg                         <  2:178761/149‑1 (MQ=255)                                                                                                                                cGCTTCTGGCACATAGCCCCGGGCGCCCGCCTGGAAGACCCGCGCATCGCCCGCGCGCCGCGCCAGCGCGACGCCCTCAAGACCCTGGCCCAGCACCCGCACGGCGTgg                                                            >  6:377413/1‑109 (MQ=255)                                                                                                                                cGCTTCTGGCACATAGCCCCGGGCGCCCGCCTGGAAGACCCGCGCATCGCCCGCGCGCCGCGCCAGCGCGACGCCCTCAAGACCCTGGCCCAGCACCCGCACGGCGTgg                                                            <  5:377413/109‑1 (MQ=255)                                                                                                                                   ttCTGGCACATAGCCCCGGGCGCCCGCCTGGAAGACCCGCGCATCGCCCGCGCGCCGCGCCAGCGCGACGCCCTCAAGACCCTGGCCCAGCACCCGCACGGCGTgg                                                            <  3:153792/106‑1 (MQ=255)                                                                                                                                   ttCTGGCACATAGCCCCGGGCGCCCGCCTGGAAGACCCGCGCATCGCCCGCGCGCCGCGCCAGCGCGACGCCCTCAAGACCCTGGCCCAGCACCCGCACGGCGTgg                                                            >  4:153792/1‑106 (MQ=255)                                                                                                                                      tGGCACATAGCCCCGGGCGCCCGCCTGGAAGACCCGCGCATCGCCCGCGCGCCGCGCCAGCGCGACGCCCTCAAGACCCTGGCCCAGCACCCGCACGGCGTGGCCCACAGCCTGCTGGCCAAACTCAACCAGAACAAGGCCAGCCTCgc              >  2:380865/1‑148 (MQ=255)                                                                                                                                      tGGCACATAGCCCCGGGCGCCCGCCTGGAAGACCCGCGCAGCGCCCGCGCGCCGCGCCAGCGCGACGCCCTCAAGACCCTGGCCCAGCACCCGCACGGCGTGGCCCACAGCCTGCTGGCCAAACTCAACCTGAACAAGGACAGCCTCGa              >  3:265919/1‑149 (MQ=255)                                                                                                                                       ggCACATAGCCCCGGGCGCCCGCCTGGAAGACCCGCGCATCGCCCGCGCGCCGCGCCAGCGCGACGCCCTCAAGACCCTGGCCCAGCACCCGCACGGCGTGGCCCACAGCCTGCTGGCCAAACTCAACCTGAACAAGGACAGCCTCGAc             >  5:299517/1‑149 (MQ=255)                                                                                                                                        gCACATAGCCCCGGGCGCCCGCCTGGAAGACCCGCGCATCGCCCGCGCGCCGCGCCAGCGCGACGCCCTCAAGACCCTGGCCCAGCACCCGCACGGCGTGGCCCACAGCCTGCTGGCCAAACTCAACCTGAACAAGGACAGCCTCg               <  2:22797/146‑1 (MQ=255)                                                                                                                                            aTAGCCCCGGGCGCCCGCCTGGAAGACCCGCGCATCGCCCGCGCGCCGCGCCAGCGCGACGCCCTCAAGACCCTGGCCCAGCACCCGCACGGCGTGGCCCACAGCCTGCTGGCCAAACTCAACCTGAACAAGGACAGCCTCGACctgct        <  3:61809/149‑1 (MQ=255)                                                                                                                                             tAGCCCCGGGCGCCCGCCTGGAAGACCCGCGCATCGCCCGCGCGCCGCGCCAGCGCGACGCCCTCAAGACCCTGGCCCAGCACCCGCACGGCGTGGCCCACAGCCTGCTGGCCAAACTCAACCTGAACAAGGACAGCCTCGACctgctg       >  2:352072/1‑149 (MQ=255)                                                                                                                                                   cGGGCGCCCGCCTGGAAGACCCGCGCATCGCCCGCGCGCCGCGCCAGCGCGACGCCCTCAAGACCCTGGCCCAGCACCCGCACGGCGTGGCCCACAGCCTGCTGGCCAAACTCAACCTGAACAAGGACAGCCTCGACCTGCTGCTGGc  >  6:2878/1‑148 (MQ=255)                                                                                                                                                    |                                                                                                                                                   CCCCGCGTCGCTGTTCAAGTTGTGCCTGTGGACCGCCCAGTACTACCAGCACAGCCTGGGCGATACCCTGAGCTGGGCGCTGCCCACGCTACTGCGCCAGGGCGAAGCCGCCGAAATGCGCCAGGAACGCTTCTGGCACATAGCCCCGGGCGCCCGCCTGGAAGACCCGCGCATCGCCCGCGCGCCGCGCCAGCGCGACGCCCTCAAGACCCTGGCCCAGCACCCGCACGGCGTGGCCCACAGCCTGCTGGCCAAACTCAACCTGAACAAGGACAGCCTCGACCTGCTGCTGGC  >  NC_002947/5810903‑5811196

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.