New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 5983860 =84 (1.400)4 (0.070) 4/246 NT 5.1% coding (4505/5049 nt) PP_5242 GAF domain‑containing sensor histidine kinase
?NC_002947 5983906 = 71 (1.270)coding (4551/5049 nt) PP_5242 GAF domain‑containing sensor histidine kinase

Only 100 of 103 total aligned reads displayed.

CTGGCGCGCAGTGCGCACTTGCAGGCGATGAATGAGCTGTCAGCGTCCATCGCCCACGAGATCAGCCAGCCGCTCCTGGGCATCGCCTCCAATGCCGCGGCCAGCCTGCGCTGGCTCAAACGCGCCAAACCCGACCTGGAAGAAGCGATTGCCGGCCTGGAAGACATCCGCAACGACAGCGAACGGGCCGGCAACATCGTGCGGGCGCTGCGGTCCCTGGCCAAGCAGTCACCGATGCAACTCAAGGCGGTGAAGCTGGACGAATTGATCCGCGAGGTGGTGCGCCTGACCTCGGCC  >  NC_002947/5983712‑5984008
                                                                                                                                                    |                                                                                                                                                    
cTGGCGCGCAGTGCGCACTTGCAGGCGATGAATGAGCTGTCAGCGTCCATCGCCCACGAGATCAGCCAGCCGCTCCTGGGCATCGCCTCCAATGCCGCGGCCAGCCTGCGCTGGCTCAAACGCGCCAAACCCGACCTGGAAGAAGCGAt                                                                                                                                                      <  6:144088/149‑1 (MQ=255)
cTGGCGCGCAGTGCGCACTTGCAGGCGATGAATGAGCTGTCAGCGTCCATCGCCCACGAGATCAGCCAGCCGCTCCTGGGCATCGCCTCCAATGCCGCGGCCAGCCTGCGCTGGCTCAAACGCGCCAAACCCGACCTGGAAGAAGCGAt                                                                                                                                                      >  7:215243/1‑149 (MQ=255)
   cttcagccgtgtctgcacatccaccttgcccttggcggcgtcggccgaggtcaggcgcaccacctcgcggatcaattcgtccagcttcaccgccttgagttgcatcggtgactgcttggccagggaccgcagcgcccgcacgatgTTGc                                                                                                                                                   >  2:24836‑M1/146‑149 (MQ=255)
   cttcagccgtgtctgcacatccaccttgcccttggcggcgtcggccgaggtcaggcgcaccacctcgcggatcaattcgtccagcttcaccgccttgagttgcatcggtgactgcttggccagggaccgcagcgcccgcacgatgTTGc                                                                                                                                                   >  1:209267‑M1/146‑149 (MQ=255)
   cttcagccgtgtctgcacatccaccttgcccttggcggcgtcggccgaggtcaggcgcaccacctcgcggatcaattcgtccagcttcaccgccttgagttgcatcggtgactgcttggccagggaccgcagcgcccgcacgatgTTGc                                                                                                                                                   >  8:128323‑M1/146‑149 (MQ=255)
    ttcagccgtgtctgcacatccaccttgcccttggcggcgtcggccgaggtcaggcgcaccacctcgcggatcaattcgtccagcttcaccgccttgagttgcatcggtgactgcttggccagggaccgcagcgcccgcacgatgTTGcc                                                                                                                                                  <  7:306878‑M1/5‑1 (MQ=255)
    ttcagccgtgtctgcacatccaccttgcccttggcggcgtcggccgaggtcaggcgcaccacctcgcggatcaattcgtccagcttcaccgccttgagttgcatcggtgactgcttggccagggaccgcagcgcccgcacgatgTTGcc                                                                                                                                                  <  5:213870‑M1/5‑1 (MQ=255)
    cgcgcAGTGCGCACTTGCAGGCGATGAATGAGCTGTCAGCGTCCATCGCCCACGAGATCAGCCAGCCGCTCCTCGGCATCGCCTCCAATGCCGCGGCCAGCCTGCGCTGGCTCAAACGCGCCAAACCCGACCTGGAAGAAGCGATTGcc                                                                                                                                                  <  1:158074/149‑1 (MQ=255)
     tcagccgtgtctgcacatacaccttgcccttggcggcgtcggccgaggtcaggcgcaccacctcgcggatcaattcgtccagcttcaccgccttgagttgcatcggtgactgcttggccagggaccgcagcgcccgcacgatgTTGCCg                                                                                                                                                 <  6:26321‑M1/6‑1 (MQ=255)
     gcgcAGTGCGCACTTGCAGGCGATGAATGAGCTGTCAGCGTCCATCGCCCACGAGCTCAGCCAGCCGCTCCTGGGCATCGCCTCCAATGCCGCGGCCAGCCTGCGCTGGCTCAAACGCGCCAAACCCGACCTGGAAGAAGCGATTGCCg                                                                                                                                                 >  3:112397/1‑149 (MQ=255)
     gcgcAGTGCGCACTTGCAGGCGATGAATGAGCTGTCAGCGTCCATCGCCCACGAGATCAGCCAGCCGCTCCTGGGCATCGCCTCCAATGCCGCGGCCAGCCTGCGCTGGCTCAAACGCGCCAAACCCGACCTGGAAGAAGCGATTGCCg                                                                                                                                                 >  3:353016/1‑149 (MQ=255)
      cagccgtgtctgcacatccaccttgcccttggcggcgtcggccgaggtcaggcgcaccacctcgcggatcaattcgtgcagcttcaccgccttgagttgcatcggtgactgcttggccagggaccgcagcgcccgcacgatgTTGcc                                                                                                                                                  >  2:74567‑M1/143‑147 (MQ=255)
      cagccgtgtctgcacatccaccttgcccttggcggcgtcggccgaggtcaggcgcaccacctcgcggatcaattcgtccagcttcaccgccttgagttgcatcggtgactgcttggccagggaccgcagcgcccgcacgatgTTGCCgg                                                                                                                                                <  3:85912‑M1/7‑1 (MQ=255)
         gcgtgtctgcacatccaccttgcccttggctgcgtcggccgaggtcaggcgcacctcctcgaggatcaattcgtccagcttcagcggcttgagttgcatcggtgactgcttggccagggaccggagcgcccgcacgatgTtgccgtccc                                                                                                                                             >  5:226957‑M1/140‑145 (MQ=255)
         aGTGCGCACTTGCAGGCGATGAATGAGCTGTCAGCGTCCATCGCCCACGAGATCAGCCAGCCGCTCCTGGGCATCGCCTCCAATGCCGCGGCCAGCCTGCGCTGGCTCAAACGCGCCAAACCTGACCTGGAAGAAGCGATTGCCGGCCt                                                                                                                                             <  1:202140/149‑1 (MQ=255)
         aGTGCGCACTTGCAGGCGATGAATGAGCTGTCAGCGTCCATCGCCCACGAGATCAGCCAGCCGCTCCTGGGCATCGCCTCCAATGCCGCGGCCAGCCTGCGCTGGCTCAAACGCGCCAAACCCGACCTGGAAGAAGCGATTGCCGGCCt                                                                                                                                             <  1:120280/149‑1 (MQ=255)
         aGTGCGCACTTGCAGGCGATGAATGAGCTGTCAGCCTCCATCGCCCACGAGATCACCCAGCCGCTCCTGGGCATCGCCTCCAATGCCGCGGCCAGCCTGCGCTGGCTCAAACGCGCCAAACCCGACCTGGAAGAAGCGATTGCCGGCCt                                                                                                                                             <  2:240713/149‑1 (MQ=255)
          gTGCGCACTTGCAGGCGATGAATGAGCTGTCAGCGTCCATCGCCCACGAGATCAGCCAGCCGCTCCTGGGCATCGCCTCCAATGCCGCGGCCAGCCTGCGCTGGCTCAAACGCGCCAAACCCGACCTGGAAGAAGCGATTGCCGGCCTg                                                                                                                                            <  1:128941/149‑1 (MQ=255)
             cgcACTTGCAGGCGATGAATGAGCTGTCAGCGTCCATCGCCCACGAGATCAGCCAGCCGCTCCTGGGCATCGCCTCCAATGCCGCGGCCAGCCTGCGCTGGCTCAAACGCGCCAAACCCGACCTGGAAGAAGCGATTGCCGGCCTGGa                                                                                                                                          <  8:195225/148‑1 (MQ=255)
               cACTTGCAGGCGATGAATGAGCTGTCAGCGTCCATCGCCCACGAGATCAGCCAGCCGCTCCTGGGCATCGCCTCCAATGCCGCGGCCAGCCTGCGCTGGCTCAAACGCGCCAAACCCGACCTGGAAGAAGCGATTGCCGGCCTGGAAGa                                                                                                                                       <  5:185320/149‑1 (MQ=255)
                aCTTGCAGGCGATGAATGAGCTGTCAGCGTCCATCGCCCACGAGATCAGCCAGCCGCTCCTGGGCATCGCCTCCAATGCCGCGGCCAGCCTGCGCTGGCTCAAACGCGCCAAACCCGACCTGGAAGAAGCGATTGCCGGCCTGGAAGa                                                                                                                                       >  5:142800/1‑148 (MQ=255)
                aCTTGCAGGCGATGAATGAGCTGTCAGCGTCCATCGCCCACGAGATCAGCCAGCCGCTCCTGGGCATCGCCTCCAATGCCGCGGCCAGCCTGCGCTGGCTCAAACGCGCCAAACCCGACCTGGAAGAAGCGATTGCCGGCCTGGAAGAc                                                                                                                                      <  1:130673/149‑1 (MQ=255)
                     atccaccttgcccttggcggcgtcggccgaggtcaggcgcaccacctcgcggatcaattcgtccagcttcaccgccttgagttgcatcggtgactgcttggccagggaccgcagcgcccgcacgatgTTGCCGGCCTGGAAGACATCCg                                                                                                                                 <  4:361722‑M1/22‑1 (MQ=255)
                      aGGCGATGAATGAGCTGTCAGCGTCCATCGCCCACGAGATCAGCCAGCCGCTCCTGGGCATCGCCTCCAATGCCGCGGCCAGCCTGCGCTGGCTCAAACGCGCCACACCCGACCTGGAAGAAGCGATTGCCGGCCTGGAAGACATCCg                                                                                                                                 >  5:26321/1‑148 (MQ=255)
                        gCGATGAATGAGCTGTCAGCGTCCATCGCCCACGAGATCAGCCAGCCGCTCCTGGGCATCGCCTCCAATGCCGCGGCCAGCCTGCGCTGGCTCAAACGCGCCAAACCCGACCTGGAAGAAGCGATTGCCGGCCTGGAAGACATCCGCaa                                                                                                                              >  2:363907/1‑149 (MQ=255)
                         cGATGAATGAGCTGTCAGCGTCCATCGCCCACGAGATCAGCCAGCCGCTCCTGGGCATCGCCTCCAATGCCGCGGCCAGCCTGCGCTGGCTCAAACGCGCCAAACCCGACCTGGAAGAAGCGATTGCCGGCCTGGAAGACATCCGCAAc                                                                                                                             <  2:239418/149‑1 (MQ=255)
                          gATGAATGAGCTGTCAGCGTCCATCGCCCACGAGATCAGCCAGCCGCTCCTGGGCATCGCCTCCAATGCCGCGGCCAGCCTGCGCTGGCTCAAACGCGCCAAACCCGACCTGGAAGAAGCGATTGCCGGCCTGGAAGACATCCGCAAc                                                                                                                             >  5:357563/1‑148 (MQ=255)
                          gATGAATGAGCTGTCAGCGTCCATCGCCCACGAGATCAGCCAGCCGCTCCTGGGCATCGCCTCCAATGCCGCGGCCAGCCTGCGCTGGCTCAAACGCGCCAAACCCGACCTGGAAGAAGCGATTGCCGGCCTGGAAGACATCCGCAACg                                                                                                                            >  4:139157/1‑149 (MQ=255)
                              aatgaGCTGTCAGCGTCCATCGCCCACGAGATCAGCCAGCCGCTCCTGGGCATCGCCTCCAATGCCGCGGCCAGCCTGCGCTGGCTCAAACGCGCCAAACCCGACCTGGAAGAAGCGATTGCCGGCCTGGAAGACATCCGCAACGACa                                                                                                                         <  1:295635/148‑1 (MQ=255)
                               atgaGCTGTCAGCGTCCATCGCCCACGAGATCAGCCAGCCGCTCCTGGGCATCGCCTCCAATGCCGCGGCCAGCCTGCGCTGGCTCAAACGCGCCAAACCCGACCTGGAAGAAGCGATTGCCGGCCTGGAAGACATCCGCAACGACAGc                                                                                                                       <  7:228906/149‑1 (MQ=255)
                                tgaGCTGTCAGCGTCCATCGCCCACGAGATCAGCCAGCCGCTCCTGGGCATCGCCTCCAATGCCGCGGCCAGCCTGCGCTGGCTCAAACGCGCCAAACCCGACCTGGAAGAAGCGATTGCCGGCCTGGAAGACATCCGCAACGACAGc                                                                                                                       >  5:48930/1‑148 (MQ=255)
                                tgaGCTGTCAGCGTCCATCGCCCACGAGATCAGCCAGCCGCTCCTGGGCATCGCCTCCAATGCCGCGGCCAGCCTGCGCTGGCTCAAACGCGCCAAACCCGACCTGGAAGAAGCGATTGCCGGCCTGGAAGACATCCGCAACGACAGc                                                                                                                       >  3:18768/1‑148 (MQ=255)
                                   gCTGTCAGCGTCCATCGCCCACGAGATCAGCCAGCCGCTCCTGGGCATCGCCTCCAATGCCGCGGCCAGCCTGCGCTGGCTCAAACTCGCCAAACCCGACCTGGAAGAAGCGATTGACGGCCTGCAAGACATCCGCAACGACAGCGAAc                                                                                                                   >  6:263338/1‑149 (MQ=255)
                                   gCTGTCAGCGTCCATCGCCCACGAGATCAGCCAGCCGCTCCTGGGCATCGCCTCCAATGCCGCGGCCAGCCTGCGCTGGCTCAAACGCGCCAAACCCGACCTGGAAGAAGCGATTGCCGGCCTGGAAGACATCCGCAACGACAGCGAAc                                                                                                                   >  6:249749/1‑149 (MQ=255)
                                    cTGTCAGCGTCCATCGCCCACGAGATCAGCCAGCCGCTCCTGGGCATCGCCTCCAATGCCGCGGCCAGCCTGCGCTGGCTCAAACGCGCCAAACCCGACCTGGAAGAAGCGATTGCCGGCCTGGAAGACATCCGCAACGACAGCGAAcc                                                                                                                  >  1:135808/1‑148 (MQ=255)
                                    cTGTCAGCGTCCATCGCCCACGAGATCAGCCAGCCGCTCCTGGGCATCGCCTCCAATGCCGCGGCCAGCCTGCGCTGGCTCAAACGCGCCAAACCCGACCTGGAAGAAGCGATTGCCGGCCTGGAAGACATCCGCAACGACAGCGAACg                                                                                                                  >  4:232323/1‑149 (MQ=255)
                                     tGTCAGCGTCCATCGCCCACGAGATCAGCCAGCCGCTCCTGGGCATCGCCTCCAATGCCGCGGCCAGCCTGCGCTGGCTCAAACGCGCCAAACCCGACCTGGAAGAAGCGATTGCCGGCCTGGAAGACATCCGCAACGACAGCGAACgg                                                                                                                 >  2:42353/1‑149 (MQ=255)
                                       tCAGCGTCCATCGCCCACGAGATCAGCCAGCCGCTCCTGGGCATCGCCTCCAATGCCGCGGCCAGCCTGCGCTGGCTCAAACGCGCCAAACCCGACCTGGAAGAAGCGATTGCCGGCCTGGAAGACATCCGCAACGACAGCGAACGGGc                                                                                                               <  4:169754/149‑1 (MQ=255)
                                          gCGTCCATCGCCCACGAGATCAGCCAGCCGCTCCTGGGCATCGCCTCCAATGCCGCGGCCAGCCTGCGCTGGCTCAAACGCGCCAAACCCGACCTGGAAGAAGCGATTGCCGGCCTGGAAGACATCCGCAACGACAGCGAACGGGCCgg                                                                                                            <  5:249749/149‑1 (MQ=255)
                                             ggccgaggtcaggcgcaccacctcgcggatcaattcgtccagcttcaccgccttgagttgcatcggtgactgcttggccagggaccgcagcgcccgcacgatgTTGCCGGCCTGGAAGACATCCGCAACGACAGCGAACGGGCCGGCaa                                                                                                         >  3:361722‑M1/104‑149 (MQ=255)
                                               cATCGCCCACGAGATCAGCCAGCCGCTCCTGGGCATCGCCTCCAATGCCGCGGCCAGCCTGCGCTGGCTCAAACGCGCCAAACCCGACCTGGAAGAAGCGATTGCCGGCCTGGAAGACATCCGCAACGACAGCGAACGGGCCGGCAACa                                                                                                       >  7:228836/1‑149 (MQ=255)
                                                aTCGCCCACGAGATCAGCCAGCCGCTCCTGGGCATCGCCTCCAATGCCGCGGCCAGCCTGCGCTGGCTCAAACGCGCCAAACCCGACCTGGAAGAAGCGATTGCCGGCCTGGAAGACATCCGCAACGACAGCGAACGGGCCGGCAACAt                                                                                                      >  5:269234/1‑149 (MQ=255)
                                                aTCGCCCACGAGATCAGCCAGCCGCTCCTGGGCATCGCCTCCAATGCCGCGGCCAGCCTGCGCTGGCTCAAACGCGCCAAACCCGACCTGGAAGAAGCGATTGCCGGCCTGGAAGACATCCGCAACGACAGCGAACGGGCCGGCAACAt                                                                                                      >  6:213870/1‑149 (MQ=255)
                                                   gCCCACGAGATCAGCCAGCCGCTCCTGTGCATCGCCTCCAATGCCGCGGCCAGCCTGCGCTGGCTCAAACGCGCCAAACCCGACCTGGAAGAAGCGATTGCCGGCCTGGAAGACATCCGCAACGACAGCGAACGGGCCGGCAACATCGt                                                                                                   <  4:267090/149‑1 (MQ=255)
                                                    cccACGAGATCAGCCAGCCGCTCCTGGGCATCGCCTCCAATGCCGCGGCCAGCCTGCGCTGGCTCAAACGCGCCAAACCCGACCTGGAAGAAGCGATTGCCGGCCTGGAAGACATCCGCAACGACAGCGAACGGGCCGGCAACATCGTg                                                                                                  <  7:200439/149‑1 (MQ=255)
                                                     tcaggcgcaccacctcgcggatcaattcgtccagcttcaccgccttgagttgcatcggtgactgcttggccagggaccgcagcgcccgcacgatgTTGCCGGCCTGGAAGACATCCGCAACGACAGCGAACGGGCCGGCAACa                                                                                                       >  8:197688‑M1/96‑143 (MQ=255)
                                                     tcaggcgcaccacctcgcggatcaattcgtccagcttcaccgccttgagttgcatcggtgactgcttggccagggaccgcagcgccagcacgatgTTGCCGGCCTGGAAGACATCCGCAACGACAGCGAACGGGCCGGCAACa                                                                                                       <  7:197688‑M1/48‑1 (MQ=255)
                                                     ccACGAGATCAGCCAGCCGCTCCTGGGCATCGCCTCCAATGCCGCGGCCAGCCTGCGCTGGCTCAAACGCGCCAAACCCGACCTGGAAGAAGCGATTGCCGGCCTGGAAGACATCCGCAACGACAGCGAACGGGCCGGCAACATCGTGc                                                                                                 >  6:342643/1‑149 (MQ=255)
                                                       aCGAGATCAGCCAGCCGCTCCTGGGCATCGCCTCCAATGCCGCGGCCAGCCTGCGCTGGCTCAAACGCGCCAAACCCGACCTGGAAGAAGCGATTGCCGGCCTGGAAGACATCCGCAACGACAGCGAACGGGCCGGCAACATCGTGCgg                                                                                               <  1:16363/149‑1 (MQ=255)
                                                        cGAGATCAGCCAGCCGCTCCTGGGCATCGCCTCCAATGCCGCGGCCAGCCTGCGCTGGCTCAAACGCGCCAAACCCGACCTGGAAGAAGCGATTGCCGGCCTGGAAGACATCCGCAACGACAGCGAACGGGCCGGCAACATCGTGCggg                                                                                              <  2:252755/149‑1 (MQ=255)
                                                            gatgcccagccGCTCCTGGGCATCGCCTCCAATGCCGCGGCCAGCCTGCGCTGGCTCAAACGCGCCAAACCCGACCTGGAAGAAGCGATTGCCGGCCTGGAAGACATCCGCAACGACAGCGAACGGGCCGGCAACATCGTGCGGGCGCt                                                                                          >  7:169857/6‑149 (MQ=255)
                                                            aTCAGCCAGCCGCTCCTGGGCATCGCCTCCAATGCCGCGGCCAGCCTGCGCTGGCTCAAACGCGCCAAACCCGACCTGGAAGAAGCGAATGCCGGCCTGGAAGACATCCGCAACGACAGCGAACGGGCCGGCAACATCGTGCGGgcgc                                                                                           <  5:49020/148‑1 (MQ=255)
                                                              cagccagcCGCTCCTGGGCATCGCCTCCAATGCCGCGGCCAGCCTGCGCTGGCTCAAACGCGCCAAACCCGACCTGGAAGAAGCGATTGCCGGCCTGGAAGACATCCGCAACGACAGCGAACGGGCCGGCAACATCGTGCGGGCGCTGc                                                                                        >  7:44572/1‑149 (MQ=255)
                                                                   agccGCTCCTGGGCATCGCCTCCAATGCCGCGGCCAGCCTGCGCTGGCTCAAACGCGCCAAACCCGACCTGGAAGAAGCGATTGCCGGCCTGGAAGACATCCGCAACGACAGCGAACGGGCCGGCAACATCGTGCGGGCGCTGCGGTcc                                                                                   <  3:232323/149‑1 (MQ=255)
                                                                    gccGCTCCTGGGCATCGCCTCCAATGCCGCGGCCAGCCTGCGCTGGCTCAAACGCGCCAAACCCGACCTGGAAGAAGCGATTGCCGGCCTGGAAGACATCCGCAACGACAGCGAACGGACCGGCAACATCGTGCGGGCGCTGCGGTccc                                                                                  >  2:302284/1‑149 (MQ=255)
                                                                     ccGCTCCTGGGCATCGCCTCCAATGCCGCGGCCAGCCTGCGCTGGCTCAAACGCGCCAAACCCGACCTGGAAGAAGCGATTGCCGGCCTGGAAGACATCCGCAACGACAGCGAACGGGCCGGCAACATCGTGCGGGCGCTGCGGTCCCt                                                                                 <  6:244597/149‑1 (MQ=255)
                                                                       gCTCCTGGGCATCGCCTCCAATGCCGCGGCCAGCCTGCGCTGGCTCAAACGCGCCAAACCCGACCTGGAAGAAGCGATTGCCGGCCTGGAAGACATCCGCAACGACAGCGAACGGGCCGGCAACATCGTGCGGGCGCTGCGGTCCCTgg                                                                               <  4:353016/149‑1 (MQ=255)
                                                                        cTCCTGGGCATCGCCTCCAATGCCGCGGCCAGCCTGCGCTGGCTCAAACGCGCCAAACCCGACCTGGAAGAAGCGATTGCCGGCCTGGAAGACATCCGCAACGACAGCGAACGGGCCGGCAACATCGTGCGGGCGCTGCGGTCCCTGGc                                                                              <  1:356276/149‑1 (MQ=255)
                                                                           cTGGGCATCGCCTCCAATGCCGCGGCCAGCCTGCGCTGGCTCAAACGCGCCAAACCCGACCTGGAAGAAGCGATTGCCGGCCTGGAAGACATCCGCAACGACAGCGAACGGGCCGGCAACATCGTGCGGGCGCTGCGGTCCCTGGCCaa                                                                           <  6:357563/149‑1 (MQ=255)
                                                                            tGGGCATCGCCTCCAATGCCGCGGCCAGCCTGCGCTGGCTCAAACGCGCCAAACCCGACCTGGAAGAAGCGATTGCCGGCCTGGAAGACATCCGCAACGACAGCGAACGGGCCGGCAACATCGTGCGGGCGCTGCGGTCCCTGGCCAAg                                                                          >  4:181448/1‑149 (MQ=255)
                                                                            tGGGCATCGCCTCCAATGCCGCGGCCAGCCTGCGCTGGCTCAAACGCGCCAAACCCGACCTGGAAGAAGCGATTGCCGGCCTGGAAGACATCCGCAACGACAGCGAACGGGCCGGCAACATCGTGCGGGCGCTGCGGTCCCTGGCCAAg                                                                          >  8:49778/1‑149 (MQ=255)
                                                                              ggCATCGCCTCCAATGCCGCGGCCAGCCTGCGCTGGCTCAAACGCGCCAAACCCGACCTGGAAGAAGCGATTGCCGGCCTGGAAGACATCCGCAACGACAGCGAACGGGCCGGCAACATCGTGCGGGCGTTGCGGTCCCTGGCCAAGc                                                                         <  5:46322/148‑1 (MQ=255)
                                                                               gCATCGCCTCCAATGCCGCGGCCAGCCTGCGCTGGCTCAAACGCGCCAAACCCGACCTGGAAGAAGCGATTGCCGGCCTGGAAGACATCCGCAACGACAGCGAACGGGCCGGCAACATCGTGCGGGCGCTGCGGTCCCTGGCCAAGCAg                                                                       >  1:242071/1‑149 (MQ=255)
                                                                                cATCGCCTCCAATGCCGCGGCCAGCCTGCGCTGGCTCAAACGCGCCAAACCCGACCTGGAAGAAGCGATTGCCGGCCTGGAAGACATCCGCAACGACAGCGAACGGGCCGGCAACATCGTGCGGGCGCTGCGGTCCCTGGCCAAGCAGt                                                                      <  2:135808/149‑1 (MQ=255)
                                                                                cATCGCCTCCAATGCCGCGGCCAGCCTGCGCTGGCTCAAACGCGCCAAACCCGACCTGGAAGAAGCGATTGCCGGCCTGGAAGACATCCGCAACGACAGCGAACGGGCCGGCAACATCGTGCGGGCGCTGCGGTCCCTGGCCAAGCAGt                                                                      <  6:170485/149‑1 (MQ=255)
                                                                                cATCGCCTCCAATGCCGCGGCCAGCCTGCGCTGGCTCAAACGCGCCAAACCCGACCTGGAAGAAGCGATTGCCGGCCTGGAAGACATCCGCAACGACAGCGAACGGGCCGGCAACATCGTGCGGGCGCTGCGGTCCCTGGCCAAGCAGt                                                                      >  3:7147/1‑149 (MQ=255)
                                                                                 aTCGCCTCCAATGCCGCGGCCAGCCTGCGCTGGCTCAAACGCGCCAAACCCGACCTGGAAGAAGCGATTGCCGGCCTGGAAGACATCCGCAACGACAGCGAACGGGCCGGCAACATCGTGCGGGCGCTGCGGTCCCTGGCCAAGCAGTc                                                                     <  1:42353/149‑1 (MQ=255)
                                                                                  tCGCCTCCAATGCCGCGGCCAGCCTGCGCTGGCTCAAACGCGCCAAACCCGACCTGGAAGAAGCGATTGCCGGCCTGGAAGACATCCGCAACGACAGCGAACGGGCCGGCAACATCGTGCGGGCGCTGCGGTCCCTGGCCAAGCAGTCa                                                                    <  6:48930/149‑1 (MQ=255)
                                                                                    gCCTCCAATGCCGCGGCCAGCCTGCGCTGGCTCAAACGCGCCAAACCCGACCTGGAAGAAGCGATTGCCGGCCTGGAAGACATCCGCAACGACAGCGAACGGGCCGGCAACATCGTGCGGGCGCTGCGGTCCCTGGCCAAGCAGTCAcc                                                                  >  2:168194/1‑149 (MQ=255)
                                                                                     ccTCCAATGCCGCGGCCAGCCTGCGCTGGCTCAAACGCGCCAAACCCGACCTGGAAGAAGCGATTGCCGGCCTGGAAGACATCCGCAACGACAGCGAACGGGCCGGCAACATCGTGCGGGCGCTGCGGTCCCTGGCCAAGCAGTCAcc                                                                  >  2:1560/1‑148 (MQ=255)
                                                                                         cAATGCCGCGGCCAGCCTGCGCTGGCTCAAACTCGCCAAACCCTACCTGGAAGAAGCGATTGCCGGCCTGGAAGACATCCGCAACGACAGCGAACGGGCCGGCAACATCGTGCGGGCGCTGCGGTCCCTGGCCAAGCAGTCACCGATGc                                                             <  6:202408/149‑1 (MQ=255)
                                                                                         cAATGCCGCGGCCAGCCTGCGCTGGCTCAAACGCGCCCAACCCGACCTGGAAGAAGCGATTGCCGGCCTGGAAGACATCCGCAACGACCGCGAACGGGCCGGCAACATCGTGCGGGCGCTGCGGTCCCTGGCCAAGCAGTCACCGATg                                                              >  8:306878/1‑148 (MQ=255)
                                                                                           aTGCCGCGGCCAGCCTGCGCTGGCTCAAACGCGCCAAACCCGACCTGGAAGAAGCGATTGCCGGCCTGGAAGACATCCGCAACGACAGCGAACGGGCCGGCAACATCGTGCGGGCGCTGCGGTCCCTGGCCAAGCAGTCACCGATGCaa                                                           >  3:235592/1‑149 (MQ=255)
                                                                                              ccGCGGCCAGCCTGCGCTGGCTCAAACGCGCCAAACCCGACCTGGAAGAAGCGATTGCCGGCCTGGAAGACATCCGCAACGACAGCGAACGGGCCGGCAACATCGTGCGGGCGCTGCGGTCCCTGGCCAAGCAGTCACCGATGCAACTc                                                        <  3:181448/149‑1 (MQ=255)
                                                                                                gcgGCCAGCCTGCGCTGGCTCAAACGCGCCAAACCCGACCTGGAAGAAGCGATTGCCGGCCTGGAAGACATCCGCAACGACAGCGAACGGGCCGGCAACATCGTGCGGGCGCTGCGGTCCCTGGCCAAGCAGTCACCGATGCAACTc                                                        >  1:226487/1‑147 (MQ=255)
                                                                                                  ggCCAGCCTGCGCTGGCTCAAACGCGCCAAACCCGACCTGGAAGAAGCGATTGCCGGCCTGGAAGACATCCGCAACGACAGCGAACGGGCCGGCAACATCGTGCGGGCGCTGCGGTCCCTGGCCAAGCa                                                                        <  7:69726/129‑1 (MQ=255)
                                                                                                   gCCAGCCTGCGCTGGCTCAAACGCGCCAAACCCGACCTGGAAGAAGCGATTGCCGGCCTGGAAGACATCCGCAACGACAGCGAACGGGCCGGCAACATCGTGCGGGCGCTTCGGTCCCTGGCCAAGCAGTCACCGATGCAACTCAAGGc                                                   <  6:269234/149‑1 (MQ=255)
                                                                                                     cAGCCTGCGCTGGCTCAAACGCGCCAAACCCGACCTGGAAGAAGCGATTGCCGGCCTGGAAGACATCCGCAACGACAGCGAACGGGCCGGCAACATCGTGCGGGCGCTGCGGTCCCTGGCCAAGCAGTCACCGATGCAACTCAAGGCgg                                                 <  4:18768/149‑1 (MQ=255)
                                                                                                             gcTGGCTCAAACGCGCCAAACCCGACCTGGAAGAAGCGATTGCCGGCCTGGAAGACATCCGCAACGACAGAGAACGGGCCGTCAACATCGTGCGGGCGCTGCGGTCCCTGGCCAAGCAGTCACCGATGCAACTCAAGGCGGTGAAGCTg                                         <  5:263338/149‑1 (MQ=255)
                                                                                                              cTGGCTCAAACGCGCCAAACCCGACCTGGAAGAAGCGATTGCCGGCCTGGAAGACATCCGCAACGACAGCGAACGGGCCGGCAACATCGTGCGGGCGCTGCGGTCCCTGGCCAAGCAGTCACCGATGCAACTCAAGGCGGTGAAGCTgg                                        <  5:342643/149‑1 (MQ=255)
                                                                                                                 gCTCAAACGCGCCAAACCCGACCTGGAAGAAGCGATTGCCGGCCTGGAAGACATCCGCAACGACAGCGAACGGGCCGGCAACATCGTGCGGGCGCTGCGGTCCCTGGCCAAGCAGTCACCGATGCAACTCAAGGCGGTGAAGCTGGa                                       <  8:228836/147‑1 (MQ=255)
                                                                                                                   tCAAACGCGCCAAACCCGACCTGGAAGAAGCGATTGCCGGCCTGGAAGACATCCGCAACGACAGCGAACGGGCCGGCAACATCGTGCGGGCGCTGCGGTCCCTGGCCAAGCAGTCACCGATGCAACTCAAGGCGGTGAAGCTGGAc                                      >  6:290487/1‑146 (MQ=255)
                                                                                                                   tCAAACGCGCCAAACCCGACCTGGAAGAAGCGATTGCCGGCCTGGAAGACATCCGCAACGACAGCGAACGGGCCGGCAACATCGTGCGGGCGCTGCGGTCCCTGGCCAAGCAGTCACCGATGCAACTCAAGGCGGTGAAGCTGGAc                                      <  5:290487/146‑1 (MQ=255)
                                                                                                                   tCAAACGCGCCAAACCCGACCTGGAAGAAGCGATTGCCGGCCTGGAAGACATCCGCAACGACAGCGAACGGGCCGGCAACATCGTGCGGGCGCTGCGGTCCCTGGCCAAGCAGTCACCGATGCAACTCAAGGCGGTGAAGCTGGACGaa                                   >  6:299490/1‑149 (MQ=255)
                                                                                                                   tCAAACGCGCCAAACCCGACCTGGAAGAAGCGATTGCCGGCCTGGAAGACATCCGCAACGACAGCGAACGGGCCGGCAACATCGTGCGGGCGCTGCGGTCCCTGGCCAAGCAGTCACCGATGCAACTCAAGGCGGTGAAGCTGGACGaa                                   >  6:208803/1‑149 (MQ=255)
                                                                                                                    cAAACGCGCCAAACCCGACCTGGAAGAACCGATTGCCGGCCTGGAAGACATCCGCAACGACAGCGAACGGGCCGGCAACATCGTGCGGGCGCTGCGGTCCCTGGCCAAGCAGTCACCGATGCAACTCAAGGCGGTGAAGCTGGACGAAt                                  <  8:246813/149‑1 (MQ=255)
                                                                                                                     aaaCGCGCCAAACCCGACCTGGAAGAAGCGATTGCCGGCCTGGAAGACATCCGCAACGACAGCGAACGGGCCGGCAACATCGTGCGGGCGCTGCGGTCCCTGGCCAAGCAGTCACCGATGCAACTCAAGGCGGTGAAGCTGGACGaa                                   <  8:169857/147‑1 (MQ=255)
                                                                                                                         gcgcCAAACCCGACCTGGAAGAAGCGATTGCCGGCCTGGAAGACATCCGCAACGACAGCGAACGGGCCGGCAACATCGTGCGGGCGCTGCGGTCCCTGGCCAAGCAGTCACCGATGCAACTCAAGGCGGTGAAGCTGGACGAATTGATc                             <  1:168194/149‑1 (MQ=255)
                                                                                                                         gcgcCAAACCCGACCTGGAAGAAGCGATTGCCGGCCTGGAAGACATCCGCAACGACAGCGAACGGGCCGGCAACATCGTGCGGGCGCTGCGGTCCCTGGCCAAGCAGTCACCGATGCAACTCAAGGCGGTGAAGCTGGACGAATTGATc                             >  3:137834/1‑149 (MQ=255)
                                                                                                                            ccAAACCCGACCTGGAAGAAGCGATTGCCGGCCTGGAAGACATCCGCAACGACAGCGAACGGGCCGGCAACATCGTGCGGGCGCTGCGGTCCCTGGCCAAGCAGTCACCGATGCAACTCAAGGCGGTGAAGCTGGACGAATTGATCcgc                          >  6:368459/1‑149 (MQ=255)
                                                                                                                                  ccGACCTGGAAGAAGCGATTGCCGGCCTGGAAGACATCCGCAACGACAGCGAACGGGCCGGCAACATCGTGCGGGCGCTGCGGTCCCTGGCCAAGCAGTCACCGATGCAACTCAAGGCGGTGAAGCTGGACGAATTGATCCGCGAggtg                    >  3:85542/1‑149 (MQ=255)
                                                                                                                                  ccGACCTGGAAGAAGCGATTGCCGGCCTGGAAGACATCCGCAACGACAGCGAACGGGCCGGCAACATCGTGCGGGCGCTGCGGTCCCTGGCCAAGCAGTCACCGATGCAACTCAAGGCGGTGAAGCTGGACGAATTGATCCGCGAggtg                    >  6:148204/1‑149 (MQ=255)
                                                                                                                                    gACCTGGAAGAAGCGATTGCCGGCCTGGAAGACATCCGCAACGACAGCGAACGGGCCGCCAACATCGTGCGGGCGCTGCGGTCCATGGCCAAGCAGTCACCCATGCAACTCAAGGCGGTCAAGCTCGACGAATTGAACCGCGAcgtggt                  >  2:230913/1‑149 (MQ=255)
                                                                                                                                       cTGGAAGAAGCGATTGCCGGCCTGGAAGACATCCGCAACGACAGCGAACGGGCCGGCAACATCGTGCGGGCGCTGCGGTCCCTGGCCAAGCAGTCACCGATGCAACTCAAGGCGGTGAAGCTGGACGAATTGATCCGCGAGGTGGTgcg               >  2:195011/1‑149 (MQ=255)
                                                                                                                                         tgaagaaGCGATTGCCGGCATGGAAGAAATAAGCAACGACAGCGAACGGGCCGGCAACATCGTGCGGGCGCTGCGGTCCCTGGCCAAGCAGTCACCGATGCAACTCAAGGCGGTGAAGCTCGACTAATAGATCCGCGAGGTGCTGCGcc             >  8:116922/2‑149 (MQ=255)
                                                                                                                                          gaagaaGCGATTGCCGGCCTGGAAGACATCCGCAACGACAGCGAACGGGCCGGCAACATCGTGCGGGCGCTGCGGTCCCTGGCCAAGCAGTCACCGATGCAACTCAAGGCGGTGAAGCTGGACGAATTGATCCGCGAGGTGGTGCGcc             <  6:142800/148‑1 (MQ=255)
                                                                                                                                             gaagCGATTGCCGGCCTGGAAGACATCCGCAACGACAGCGAACGGGCCGGCAACATCGTGCGGGCGCTGCGGTCCCTGGCCAAGCAGTCACCGATGCAACTCAAGGCGGTGAAGCTGGACGAATTGATCCGCGAGGTGGTGCGCCTGAc         <  8:101492/149‑1 (MQ=255)
                                                                                                                                                gCGATTGCCGGCCTGGAAGACATCCGCAACGACAGCGAACGGGCCGGCAACATCGTGCGGGCGCTGCGGTCCCTGGCCAAGCAGTCACCGATGCAACTCAAGGCGGTGAAGCTGGACGAATTGATCCGCGAGGTGGTGCGCCTGACCTc      >  3:178848/1‑149 (MQ=255)
                                                                                                                                                  gATTGCCGGCCTGGAAGACATCCGCAACGACAGCGAACGGGCCGGCAACATCGTGCGGGCGCTGCGGTCCCTGGCCAAGCAGTCACCGATGCAACTCAAGGCGGTGAAGCTGGACGAATTGATCCGCGAGGTGGTGCGCCTGACCTCgg    <  2:242071/149‑1 (MQ=255)
                                                                                                                                                    TTGCCGGCCTGGAAGACATCCGCAACGACAGCGAACGGGCCGGCAACATCGTGCGGGCGCTGCGGTCCCTGGCCAAGCAGTCACCGATGCAACTCAAGGCGGTGAAGCTGGACGAATTGATCCGCGAGGTGGTGCGCCTGACCTCGGcc  <  4:114897‑M1/149‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                                    
CTGGCGCGCAGTGCGCACTTGCAGGCGATGAATGAGCTGTCAGCGTCCATCGCCCACGAGATCAGCCAGCCGCTCCTGGGCATCGCCTCCAATGCCGCGGCCAGCCTGCGCTGGCTCAAACGCGCCAAACCCGACCTGGAAGAAGCGATTGCCGGCCTGGAAGACATCCGCAACGACAGCGAACGGGCCGGCAACATCGTGCGGGCGCTGCGGTCCCTGGCCAAGCAGTCACCGATGCAACTCAAGGCGGTGAAGCTGGACGAATTGATCCGCGAGGTGGTGCGCCTGACCTCGGCC  >  NC_002947/5983712‑5984008

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.