New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5983860 =	84 (1.400)	4 (0.070)	4/246	NT	5.1%	coding (4505/5049 nt)	PP_5242	GAF domain‑containing sensor histidine kinase
	?	NC_002947	5983906 =	71 (1.270)					coding (4551/5049 nt)	PP_5242	GAF domain‑containing sensor histidine kinase

CATCGCCCACGAGATCAGCCAGCCGCTCCTGGGCATCGCCTCCAATGCCGCGGCCAGCCTGCGCTGGCTCAAACGCGCCAAACCCGACCTGGAAGAAGCGATTGCCGGCCTGGAAGACATCCGCAACGACAGCGAACGGGCCGGCAACATCGTGCGGGCGCTGCGGTCCCTGGCCAAGCAGTCACCGATGCAACTCAAGGCGGTGAAGCTGGACGAATTGATCCGCGAGGTGGTGCGCCTGACCTCGGCCGACGCCGCCAAGGGCAAGGTGGATGTGCAGACACGGCTGAAGGCCG  >  NC_002947/5983759‑5984054                                                                                                                                                    |                                                                                                                                                     cATCGCCCACGAGATCAGCCAGCCGCTCCTGGGCATCGCCTCCAATGCCGCGGCCAGCCTGCGCTGGCTCAAACGCGCCAAACCCGACCTGGAAGAAGCGATTGCCGGCCTGGAAGACATCCGCAACGACAGCGAACGGGCCGGCAACa                                                                                                                                                     >  7:228836/1‑149 (MQ=255)  aTCGCCCACGAGATCAGCCAGCCGCTCCTGGGCATCGCCTCCAATGCCGCGGCCAGCCTGCGCTGGCTCAAACGCGCCAAACCCGACCTGGAAGAAGCGATTGCCGGCCTGGAAGACATCCGCAACGACAGCGAACGGGCCGGCAACAt                                                                                                                                                    >  5:269234/1‑149 (MQ=255)  aTCGCCCACGAGATCAGCCAGCCGCTCCTGGGCATCGCCTCCAATGCCGCGGCCAGCCTGCGCTGGCTCAAACGCGCCAAACCCGACCTGGAAGAAGCGATTGCCGGCCTGGAAGACATCCGCAACGACAGCGAACGGGCCGGCAACAt                                                                                                                                                    >  6:213870/1‑149 (MQ=255)     gCCCACGAGATCAGCCAGCCGCTCCTGTGCATCGCCTCCAATGCCGCGGCCAGCCTGCGCTGGCTCAAACGCGCCAAACCCGACCTGGAAGAAGCGATTGCCGGCCTGGAAGACATCCGCAACGACAGCGAACGGGCCGGCAACATCGt                                                                                                                                                 <  4:267090/149‑1 (MQ=255)      cccACGAGATCAGCCAGCCGCTCCTGGGCATCGCCTCCAATGCCGCGGCCAGCCTGCGCTGGCTCAAACGCGCCAAACCCGACCTGGAAGAAGCGATTGCCGGCCTGGAAGACATCCGCAACGACAGCGAACGGGCCGGCAACATCGTg                                                                                                                                                <  7:200439/149‑1 (MQ=255)       tcaggcgcaccacctcgcggatcaattcgtccagcttcaccgccttgagttgcatcggtgactgcttggccagggaccgcagcgcccgcacgatgTTGCCGGCCTGGAAGACATCCGCAACGACAGCGAACGGGCCGGCAACa                                                                                                                                                     >  8:197688‑M1/96‑143 (MQ=255)       tcaggcgcaccacctcgcggatcaattcgtccagcttcaccgccttgagttgcatcggtgactgcttggccagggaccgcagcgccagcacgatgTTGCCGGCCTGGAAGACATCCGCAACGACAGCGAACGGGCCGGCAACa                                                                                                                                                     <  7:197688‑M1/48‑1 (MQ=255)       ccACGAGATCAGCCAGCCGCTCCTGGGCATCGCCTCCAATGCCGCGGCCAGCCTGCGCTGGCTCAAACGCGCCAAACCCGACCTGGAAGAAGCGATTGCCGGCCTGGAAGACATCCGCAACGACAGCGAACGGGCCGGCAACATCGTGc                                                                                                                                               >  6:342643/1‑149 (MQ=255)         aCGAGATCAGCCAGCCGCTCCTGGGCATCGCCTCCAATGCCGCGGCCAGCCTGCGCTGGCTCAAACGCGCCAAACCCGACCTGGAAGAAGCGATTGCCGGCCTGGAAGACATCCGCAACGACAGCGAACGGGCCGGCAACATCGTGCgg                                                                                                                                             <  1:16363/149‑1 (MQ=255)          cGAGATCAGCCAGCCGCTCCTGGGCATCGCCTCCAATGCCGCGGCCAGCCTGCGCTGGCTCAAACGCGCCAAACCCGACCTGGAAGAAGCGATTGCCGGCCTGGAAGACATCCGCAACGACAGCGAACGGGCCGGCAACATCGTGCggg                                                                                                                                            <  2:252755/149‑1 (MQ=255)              gatgcccagccGCTCCTGGGCATCGCCTCCAATGCCGCGGCCAGCCTGCGCTGGCTCAAACGCGCCAAACCCGACCTGGAAGAAGCGATTGCCGGCCTGGAAGACATCCGCAACGACAGCGAACGGGCCGGCAACATCGTGCGGGCGCt                                                                                                                                        >  7:169857/6‑149 (MQ=255)              aTCAGCCAGCCGCTCCTGGGCATCGCCTCCAATGCCGCGGCCAGCCTGCGCTGGCTCAAACGCGCCAAACCCGACCTGGAAGAAGCGAATGCCGGCCTGGAAGACATCCGCAACGACAGCGAACGGGCCGGCAACATCGTGCGGgcgc                                                                                                                                         <  5:49020/148‑1 (MQ=255)                cagccagcCGCTCCTGGGCATCGCCTCCAATGCCGCGGCCAGCCTGCGCTGGCTCAAACGCGCCAAACCCGACCTGGAAGAAGCGATTGCCGGCCTGGAAGACATCCGCAACGACAGCGAACGGGCCGGCAACATCGTGCGGGCGCTGc                                                                                                                                      >  7:44572/1‑149 (MQ=255)                     agccGCTCCTGGGCATCGCCTCCAATGCCGCGGCCAGCCTGCGCTGGCTCAAACGCGCCAAACCCGACCTGGAAGAAGCGATTGCCGGCCTGGAAGACATCCGCAACGACAGCGAACGGGCCGGCAACATCGTGCGGGCGCTGCGGTcc                                                                                                                                 <  3:232323/149‑1 (MQ=255)                      gccGCTCCTGGGCATCGCCTCCAATGCCGCGGCCAGCCTGCGCTGGCTCAAACGCGCCAAACCCGACCTGGAAGAAGCGATTGCCGGCCTGGAAGACATCCGCAACGACAGCGAACGGACCGGCAACATCGTGCGGGCGCTGCGGTccc                                                                                                                                >  2:302284/1‑149 (MQ=255)                       ccGCTCCTGGGCATCGCCTCCAATGCCGCGGCCAGCCTGCGCTGGCTCAAACGCGCCAAACCCGACCTGGAAGAAGCGATTGCCGGCCTGGAAGACATCCGCAACGACAGCGAACGGGCCGGCAACATCGTGCGGGCGCTGCGGTCCCt                                                                                                                               <  6:244597/149‑1 (MQ=255)                         gCTCCTGGGCATCGCCTCCAATGCCGCGGCCAGCCTGCGCTGGCTCAAACGCGCCAAACCCGACCTGGAAGAAGCGATTGCCGGCCTGGAAGACATCCGCAACGACAGCGAACGGGCCGGCAACATCGTGCGGGCGCTGCGGTCCCTgg                                                                                                                             <  4:353016/149‑1 (MQ=255)                          cTCCTGGGCATCGCCTCCAATGCCGCGGCCAGCCTGCGCTGGCTCAAACGCGCCAAACCCGACCTGGAAGAAGCGATTGCCGGCCTGGAAGACATCCGCAACGACAGCGAACGGGCCGGCAACATCGTGCGGGCGCTGCGGTCCCTGGc                                                                                                                            <  1:356276/149‑1 (MQ=255)                             cTGGGCATCGCCTCCAATGCCGCGGCCAGCCTGCGCTGGCTCAAACGCGCCAAACCCGACCTGGAAGAAGCGATTGCCGGCCTGGAAGACATCCGCAACGACAGCGAACGGGCCGGCAACATCGTGCGGGCGCTGCGGTCCCTGGCCaa                                                                                                                         <  6:357563/149‑1 (MQ=255)                              tGGGCATCGCCTCCAATGCCGCGGCCAGCCTGCGCTGGCTCAAACGCGCCAAACCCGACCTGGAAGAAGCGATTGCCGGCCTGGAAGACATCCGCAACGACAGCGAACGGGCCGGCAACATCGTGCGGGCGCTGCGGTCCCTGGCCAAg                                                                                                                        >  8:49778/1‑149 (MQ=255)                              tGGGCATCGCCTCCAATGCCGCGGCCAGCCTGCGCTGGCTCAAACGCGCCAAACCCGACCTGGAAGAAGCGATTGCCGGCCTGGAAGACATCCGCAACGACAGCGAACGGGCCGGCAACATCGTGCGGGCGCTGCGGTCCCTGGCCAAg                                                                                                                        >  4:181448/1‑149 (MQ=255)                                ggCATCGCCTCCAATGCCGCGGCCAGCCTGCGCTGGCTCAAACGCGCCAAACCCGACCTGGAAGAAGCGATTGCCGGCCTGGAAGACATCCGCAACGACAGCGAACGGGCCGGCAACATCGTGCGGGCGTTGCGGTCCCTGGCCAAGc                                                                                                                       <  5:46322/148‑1 (MQ=255)                                 gCATCGCCTCCAATGCCGCGGCCAGCCTGCGCTGGCTCAAACGCGCCAAACCCGACCTGGAAGAAGCGATTGCCGGCCTGGAAGACATCCGCAACGACAGCGAACGGGCCGGCAACATCGTGCGGGCGCTGCGGTCCCTGGCCAAGCAg                                                                                                                     >  1:242071/1‑149 (MQ=255)                                  cATCGCCTCCAATGCCGCGGCCAGCCTGCGCTGGCTCAAACGCGCCAAACCCGACCTGGAAGAAGCGATTGCCGGCCTGGAAGACATCCGCAACGACAGCGAACGGGCCGGCAACATCGTGCGGGCGCTGCGGTCCCTGGCCAAGCAGt                                                                                                                    <  6:170485/149‑1 (MQ=255)                                  cATCGCCTCCAATGCCGCGGCCAGCCTGCGCTGGCTCAAACGCGCCAAACCCGACCTGGAAGAAGCGATTGCCGGCCTGGAAGACATCCGCAACGACAGCGAACGGGCCGGCAACATCGTGCGGGCGCTGCGGTCCCTGGCCAAGCAGt                                                                                                                    <  6:176099/149‑1 (MQ=255)                                  cATCGCCTCCAATGCCGCGGCCAGCCTGCGCTGGCTCAAACGCGCCAAACCCGACCTGGAAGAAGCGATTGCCGGCCTGGAAGACATCCGCAACGACAGCGAACGGGCCGGCAACATCGTGCGGGCGCTGCGGTCCCTGGCCAAGCAGt                                                                                                                    >  3:7147/1‑149 (MQ=255)                                  cATCGCCTCCAATGCCGCGGCCAGCCTGCGCTGGCTCAAACGCGCCAAACCCGACCTGGAAGAAGCGATTGCCGGCCTGGAAGACATCCGCAACGACAGCGAACGGGCCGGCAACATCGTGCGGGCGCTGCGGTCCCTGGCCAAGCAGt                                                                                                                    <  2:135808/149‑1 (MQ=255)                                   aTCGCCTCCAATGCCGCGGCCAGCCTGCGCTGGCTCAAACGCGCCAAACCCGACCTGGAAGAAGCGATTGCCGGCCTGGAAGACATCCGCAACGACAGCGAACGGGCCGGCAACATCGTGCGGGCGCTGCGGTCCCTGGCCAAGCAGTc                                                                                                                   <  1:42353/149‑1 (MQ=255)                                    tCGCCTCCAATGCCGCGGCCAGCCTGCGCTGGCTCAAACGCGCCAAACCCGACCTGGAAGAAGCGATTGCCGGCCTGGAAGACATCCGCAACGACAGCGAACGGGCCGGCAACATCGTGCGGGCGCTGCGGTCCCTGGCCAAGCAGTCa                                                                                                                  <  6:48930/149‑1 (MQ=255)                                      gCCTCCAATGCCGCGGCCAGCCTGCGCTGGCTCAAACGCGCCAAACCCGACCTGGAAGAAGCGATTGCCGGCCTGGAAGACATCCGCAACGACAGCGAACGGGCCGGCAACATCGTGCGGGCGCTGCGGTCCCTGGCCAAGCAGTCAcc                                                                                                                >  2:168194/1‑149 (MQ=255)                                       ccTCCAATGCCGCGGCCAGCCTGCGCTGGCTCAAACGCGCCAAACCCGACCTGGAAGAAGCGATTGCCGGCCTGGAAGACATCCGCAACGACAGCGAACGGGCCGGCAACATCGTGCGGGCGCTGCGGTCCCTGGCCAAGCAGTCAcc                                                                                                                >  2:1560/1‑148 (MQ=255)                                           cAATGCCGCGGCCAGCCTGCGCTGGCTCAAACTCGCCAAACCCTACCTGGAAGAAGCGATTGCCGGCCTGGAAGACATCCGCAACGACAGCGAACGGGCCGGCAACATCGTGCGGGCGCTGCGGTCCCTGGCCAAGCAGTCACCGATGc                                                                                                           <  6:202408/149‑1 (MQ=255)                                           cAATGCCGCGGCCAGCCTGCGCTGGCTCAAACGCGCCCAACCCGACCTGGAAGAAGCGATTGCCGGCCTGGAAGACATCCGCAACGACCGCGAACGGGCCGGCAACATCGTGCGGGCGCTGCGGTCCCTGGCCAAGCAGTCACCGATg                                                                                                            >  8:306878/1‑148 (MQ=255)                                             aTGCCGCGGCCAGCCTGCGCTGGCTCAAACGCGCCAAACCCGACCTGGAAGAAGCGATTGCCGGCCTGGAAGACATCCGCAACGACAGCGAACGGGCCGGCAACATCGTGCGGGCGCTGCGGTCCCTGGCCAAGCAGTCACCGATGCaa                                                                                                         >  3:235592/1‑149 (MQ=255)                                                ccGCGGCCAGCCTGCGCTGGCTCAAACGCGCCAAACCCGACCTGGAAGAAGCGATTGCCGGCCTGGAAGACATCCGCAACGACAGCGAACGGGCCGGCAACATCGTGCGGGCGCTGCGGTCCCTGGCCAAGCAGTCACCGATGCAACTc                                                                                                      <  3:181448/149‑1 (MQ=255)                                                  gcgGCCAGCCTGCGCTGGCTCAAACGCGCCAAACCCGACCTGGAAGAAGCGATTGCCGGCCTGGAAGACATCCGCAACGACAGCGAACGGGCCGGCAACATCGTGCGGGCGCTGCGGTCCCTGGCCAAGCAGTCACCGATGCAACTc                                                                                                      >  1:226487/1‑147 (MQ=255)                                                    ggCCAGCCTGCGCTGGCTCAAACGCGCCAAACCCGACCTGGAAGAAGCGATTGCCGGCCTGGAAGACATCCGCAACGACAGCGAACGGGCCGGCAACATCGTGCGGGCGCTGCGGTCCCTGGCCAAGCa                                                                                                                      <  7:69726/129‑1 (MQ=255)                                                    ggCCAGCCTGCGCTGGCTCAAACGCGCCAAACCCGACCTGGAAGAAGCGATTGCCGGCCTGGAAGACATCCGCAACGACAGCGAACGGGCCGGCAACATCGTGCGGGCGCTGCGGTCCCTGGCCAAGCa                                                                                                                      >  8:69726/1‑129 (MQ=255)                                                     gCCAGCCTGCGCTGGCTCAAACGCGCCAAACCCGACCTGGAAGAAGCGATTGCCGGCCTGGAAGACATCCGCAACGACAGCGAACGGGCCGGCAACATCGTGCGGGCGCTTCGGTCCCTGGCCAAGCAGTCACCGATGCAACTCAAGGc                                                                                                 <  6:269234/149‑1 (MQ=255)                                                       cAGCCTGCGCTGGCTCAAACGCGCCAAACCCGACCTGGAAGAAGCGATTGCCGGCCTGGAAGACATCCGCAACGACAGCGAACGGGCCGGCAACATCGTGCGGGCGCTGCGGTCCCTGGCCAAGCAGTCACCGATGCAACTCAAGGCgg                                                                                               <  4:18768/149‑1 (MQ=255)                                                               gcTGGCTCAAACGCGCCAAACCCGACCTGGAAGAAGCGATTGCCGGCCTGGAAGACATCCGCAACGACAGAGAACGGGCCGTCAACATCGTGCGGGCGCTGCGGTCCCTGGCCAAGCAGTCACCGATGCAACTCAAGGCGGTGAAGCTg                                                                                       <  5:263338/149‑1 (MQ=255)                                                                cTGGCTCAAACGCGCCAAACCCGACCTGGAAGAAGCGATTGCCGGCCTGGAAGACATCCGCAACGACAGCGAACGGGCCGGCAACATCGTGCGGGCGCTGCGGTCCCTGGCCAAGCAGTCACCGATGCAACTCAAGGCGGTGAAGCTgg                                                                                      <  5:342643/149‑1 (MQ=255)                                                                   gCTCAAACGCGCCAAACCCGACCTGGAAGAAGCGATTGCCGGCCTGGAAGACATCCGCAACGACAGCGAACGGGCCGGCAACATCGTGCGGGCGCTGCGGTCCCTGGCCAAGCAGTCACCGATGCAACTCAAGGCGGTGAAGCTGGa                                                                                     <  8:228836/147‑1 (MQ=255)                                                                     tCAAACGCGCCAAACCCGACCTGGAAGAAGCGATTGCCGGCCTGGAAGACATCCGCAACGACAGCGAACGGGCCGGCAACATCGTGCGGGCGCTGCGGTCCCTGGCCAAGCAGTCACCGATGCAACTCAAGGCGGTGAAGCTGGAc                                                                                    <  5:290487/146‑1 (MQ=255)                                                                     tCAAACGCGCCAAACCCGACCTGGAAGAAGCGATTGCCGGCCTGGAAGACATCCGCAACGACAGCGAACGGGCCGGCAACATCGTGCGGGCGCTGCGGTCCCTGGCCAAGCAGTCACCGATGCAACTCAAGGCGGTGAAGCTGGAc                                                                                    >  6:290487/1‑146 (MQ=255)                                                                     tCAAACGCGCCAAACCCGACCTGGAAGAAGCGATTGCCGGCCTGGAAGACATCCGCAACGACAGCGAACGGGCCGGCAACATCGTGCGGGCGCTGCGGTCCCTGGCCAAGCAGTCACCGATGCAACTCAAGGCGGTGAAGCTGGACGaa                                                                                 >  6:208803/1‑149 (MQ=255)                                                                     tCAAACGCGCCAAACCCGACCTGGAAGAAGCGATTGCCGGCCTGGAAGACATCCGCAACGACAGCGAACGGGCCGGCAACATCGTGCGGGCGCTGCGGTCCCTGGCCAAGCAGTCACCGATGCAACTCAAGGCGGTGAAGCTGGACGaa                                                                                 >  6:299490/1‑149 (MQ=255)                                                                      cAAACGCGCCAAACCCGACCTGGAAGAACCGATTGCCGGCCTGGAAGACATCCGCAACGACAGCGAACGGGCCGGCAACATCGTGCGGGCGCTGCGGTCCCTGGCCAAGCAGTCACCGATGCAACTCAAGGCGGTGAAGCTGGACGAAt                                                                                <  8:246813/149‑1 (MQ=255)                                                                       aaaCGCGCCAAACCCGACCTGGAAGAAGCGATTGCCGGCCTGGAAGACATCCGCAACGACAGCGAACGGGCCGGCAACATCGTGCGGGCGCTGCGGTCCCTGGCCAAGCAGTCACCGATGCAACTCAAGGCGGTGAAGCTGGACGaa                                                                                 <  8:169857/147‑1 (MQ=255)                                                                        aaCGCGCCAAACCCGACCTGGAAGAAGCGATTGCCGGCCTGGAAGACATCCGCAACGACAGCGAACGGGCCGGCAACATCGTGCGGGCGCTGCGGTCCCTGGCCAAGCAGTCACCGATGCAACTCAAGGCGGTGAAGCTGGACGAAtt                                                                               >  3:23453/1‑148 (MQ=255)                                                                           gcgcCAAACCCGACCTGGAAGAAGCGATTGCCGGCCTGGAAGACATCCGCAACGACAGCGAACGGGCCGGCAACATCGTGCGGGCGCTGCGGTCCCTGGCCAAGCAGTCACCGATGCAACTCAAGGCGGTGAAGCTGGACGAATTGATc                                                                           >  3:137834/1‑149 (MQ=255)                                                                           gcgcCAAACCCGACCTGGAAGAAGCGATTGCCGGCCTGGAAGACATCCGCAACGACAGCGAACGGGCCGGCAACATCGTGCGGGCGCTGCGGTCCCTGGCCAAGCAGTCACCGATGCAACTCAAGGCGGTGAAGCTGGACGAATTGATc                                                                           <  1:168194/149‑1 (MQ=255)                                                                              ccAAACCCGACCTGGAAGAAGCGATTGCCGGCCTGGAAGACATCCGCAACGACAGCGAACGGGCCGGCAACATCGTGCGGGCGCTGCGGTCCCTGGCCAAGCAGTCACCGATGCAACTCAAGGCGGTGAAGCTGGACGAATTGATCcgc                                                                        >  6:368459/1‑149 (MQ=255)                                                                                    ccGACCTGGAAGAAGCGATTGCCGGCCTGGAAGACATCCGCAACGACAGCGAACGGGCCGGCAACATCGTGCGGGCGCTGCGGTCCCTGGCCAAGCAGTCACCGATGCAACTCAAGGCGGTGAAGCTGGACGAATTGATCCGCGAggtg                                                                  >  6:148204/1‑149 (MQ=255)                                                                                    ccGACCTGGAAGAAGCGATTGCCGGCCTGGAAGACATCCGCAACGACAGCGAACGGGCCGGCAACATCGTGCGGGCGCTGCGGTCCCTGGCCAAGCAGTCACCGATGCAACTCAAGGCGGTGAAGCTGGACGAATTGATCCGCGAggtg                                                                  >  3:85542/1‑149 (MQ=255)                                                                                      gACCTGGAAGAAGCGATTGCCGGCCTGGAAGACATCCGCAACGACAGCGAACGGGCCGCCAACATCGTGCGGGCGCTGCGGTCCATGGCCAAGCAGTCACCCATGCAACTCAAGGCGGTCAAGCTCGACGAATTGAACCGCGAcgtggt                                                                >  2:230913/1‑149 (MQ=255)                                                                                         cTGGAAGAAGCGATTGCCGGCCTGGAAGACATCCGCAACGACAGCGAACGGGCCGGCAACATCGTGCGGGCGCTGCGGTCCCTGGCCAAGCAGTCACCGATGCAACTCAAGGCGGTGAAGCTGGACGAATTGATCCGCGAGGTGGTgcg                                                             >  2:195011/1‑149 (MQ=255)                                                                                           tgaagaaGCGATTGCCGGCATGGAAGAAATAAGCAACGACAGCGAACGGGCCGGCAACATCGTGCGGGCGCTGCGGTCCCTGGCCAAGCAGTCACCGATGCAACTCAAGGCGGTGAAGCTCGACTAATAGATCCGCGAGGTGCTGCGcc                                                           >  8:116922/2‑149 (MQ=255)                                                                                            gaagaaGCGATTGCCGGCCTGGAAGACATCCGCAACGACAGCGAACGGGCCGGCAACATCGTGCGGGCGCTGCGGTCCCTGGCCAAGCAGTCACCGATGCAACTCAAGGCGGTGAAGCTGGACGAATTGATCCGCGAGGTGGTGCGcc                                                           <  6:142800/148‑1 (MQ=255)                                                                                               gaagCGATTGCCGGCCTGGAAGACATCCGCAACGACAGCGAACGGGCCGGCAACATCGTGCGGGCGCTGCGGTCCCTGGCCAAGCAGTCACCGATGCAACTCAAGGCGGTGAAGCTGGACGAATTGATCCGCGAGGTGGTGCGCCTGAc                                                       <  8:101492/149‑1 (MQ=255)                                                                                                  gCGATTGCCGGCCTGGAAGACATCCGCAACGACAGCGAACGGGCCGGCAACATCGTGCGGGCGCTGCGGTCCCTGGCCAAGCAGTCACCGATGCAACTCAAGGCGGTGAAGCTGGACGAATTGATCCGCGAGGTGGTGCGCCTGACCTc                                                    >  3:178848/1‑149 (MQ=255)                                                                                                    tgttgccggcccgttcgctgtcgttgcggatgtcttccaggccggcaaCATCGTGCTGGCGCTGCGGTCCCTGGCCAAGCAGTCACCGATGCAACTCAAGGCGGTGAAGCTGGACGAATTGATCCGCGAGGTGGTGCGCCTGa                                                        <  7:197688‑M2/95‑1 (MQ=255)                                                                                                    tgttgccggcccgttcgctgtcgttgcggatgtcttccaggccggcaaCATCGTGCGGGCGCTGCGGTCCCTGGCCAAGCAGTCACCGATGCAACTCAAGGCGGTGAAGCTGGACGAATTGATCCGCGAGGTGGTGCGCCTGa                                                        >  8:197688‑M2/49‑143 (MQ=255)                                                                                                    gATTGCCGGCCTGGAAGACATCCGCAACGACAGCGAACGGGCCGGCAACATCGTGCGGGCGCTGCGGTCCCTGGCCAAGCAGTCACCGATGCAACTCAAGGCGGTGAAGCTGGACGAATTGATCCGCGAGGTGGTGCGCCTGACCTCgg                                                  <  2:242071/149‑1 (MQ=255)                                                                                                      ttgccggcccgttcgctgtcgttgcggatgtcttccaggccggcaaCATCGTGCGGGCGCTGCGGTCCCTGGCCAAGCAGTCACCGATGCAACTCAAGGCGGTGAAGCTGGACGAATTGATCCGCGAGGTGGTGCGCCTGACCTCGGcc                                                >  3:361722‑M2/47‑149 (MQ=255)                                                                                                      TTGCCGGCCTGGAAGACATCCGCAACGACAGCGAACGGGCCGGCAACATCGTGCGGGCGCTGCGGTCCCTGGCCAAGCAGTCACCGATGCAACTCAAGGCGGTGAAGCTGGACGAATTGATCCGCGAGGTGGTGCGCCTGACCTCGGcc                                                <  4:114897‑M1/149‑1 (MQ=255)                                                                                                        GCCGGCCTGGAAGACATCCGCAACGACAGCGAACGGGCCGGCAACATCGTGCGGGCGCTGCGGTCCCTGGCCAAGCAGTCACCGATGCAACTCAAGGCGGTg                                                                                             >  3:57499‑M1/1‑102 (MQ=255)                                                                                                        GCCGGCCTGGAAGACATCCGCAACGACAGCGAACGGGCCGGCAACATCGTGCGGGCGCTGCGGTCCCTGGCCAAGCAGTCACCGATGCAACTCAAGGCGGTg                                                                                             <  4:57499‑M1/102‑1 (MQ=255)                                                                                                            GCCTGGAAGACATCCGCAACGACAGCGAACGGGCCGGCAACATCGTGCGGGCGCTGCGGTCCCTGGCCAAGCAGTCACCGATGCAACTCAAGGCGGTGAAGCTGGACGAATTGATCCGCGAGGTGGTGCGCCTGACCTCGGCCGAcgcc                                          >  8:215243‑M1/1‑149 (MQ=255)                                                                                                                 gAAGACATCCGCAACGACAGCGAACGGGCCGGCAACATCGTGCGGGCGCTGCGGTCCCTGGCCAAGCAGTCACCGATGCAACTCAAGGCGGTGAAGCTGGACGAATTGATCCGCGAGGTGGTGCGCCTGACCTCGGCCGACGCCGCCaa                                     <  1:363907/149‑1 (MQ=255)                                                                                                                 gAAGACATCCGCAACGACAGCGAACGGGCCGGCAACATCGTGCGGGCGCTGCGGTCCCTGGCCAAGCAGTCACCGATGCAACTCAAGGCGGTGAAGCTGGACGAATTGATCCGCGAGGTGGTGCGCCTGACCTCGGCCGACGCCGCCaa                                     <  5:208803/149‑1 (MQ=255)                                                                                                                  aaGACATCCGCAACGACAGCGAACGGGCCGGCAACATCGTGCGGGCGCTGCGGTCCCTGGCCAAGCAGTCACCGATGCAACTCAAGGCGGTGAAGCTGGACGAATTGATCCGCGAGGTGGTGCGCCTGACCTCGGCCGACGCCGCCAAg                                    <  7:49778/149‑1 (MQ=255)                                                                                                                   aGACATCCGCAACGACAGCGAACGGGCCGGCAACATCGTGCGGGCGCTGCGGTCCCTGGCCAAGCAGTCACCGATGCAACTCAAGGCGGTGAAGCTGGACGAATTGATCCGCGAGGTGGTGCGCCTGACCTCGGCCGACGCCGCCAAgg                                   <  1:195011/149‑1 (MQ=255)                                                                                                                       aTCCGCAACGACAGCGAACGGGCCGGCAACATCGTGCGGGCGCTGCGGTCCCTGGCCAAGCAGTCACCGATGCAACTCAAGGCGGTGAAGCTGGACGAATTGATCCGCGAGGTGGTGCGCCTGACCTCGGCCGACGCCGCCAAGGGc                                 >  3:72068/1‑147 (MQ=255)                                                                                                                       aTCCGCAACGACAGCGAACGGGCCGGCAACATCGTGCGGGCGCTGCGGTCCCTGGCCAAGCAGTCACCGATGCAACTCAAGGCGGTGAAGCTGGACGAATTGATCCGCGAGGTGGTGCGCCTGACCTCGGCCGACGCCACCAAGGGCaa                               <  4:85542/149‑1 (MQ=255)                                                                                                                        tCCGCAACGACAGCGAACGGGCCGGCAACATCGTGCGGGCGCTGCGGTCCCTGGCCAAGCAGTCACCGATGCAACTCAAGGCGGTGAAGCTGGACGAATTGATCCGCGAGGTGGTGCGCCTGACCTCGGCCGACGCCGCCAAGGGCAAg                              >  4:85912/1‑149 (MQ=255)                                                                                                                         ccGCAACGACAGCGAACGGGCCGGCAACATCGTGCGGGCGCTGCGGTCCCTGGCCAAGCAGTCACCGATGCAACTCAAGGCg                                                                                                >  4:240140/1‑82 (MQ=255)                                                                                                                         ccGCAACGACAGCGAACGGGCCGGCAACATCGTGCGGGCGCTGCGGTCCCTGGCCAAGCAGTCACCGATGCAACTCAAGGCg                                                                                                <  3:240140/82‑1 (MQ=255)                                                                                                                          cGCAACGACAGCGAACGGGCCGGCAACATCGTGCGGGCGCTGCGGTCCCTGGCCAAGCAGTCACCGATGCAACTCAAGGCGGTGAAGCTGGACGAATTGATCCGCGAGGTGGTGCGCCTGACCTCGGCCGACGCCGCCAAGGGCAAGGt                            <  4:137834/149‑1 (MQ=255)                                                                                                                           gCAACGACAGCGAACGGGCCGGCAACATCGTGCGGGCGCTGCGGTCCCTGGCCAAGCAGTCACCGATGCAACTCAAGGCGGTGAAGCTGGACGAATTGATCCGCGAGGTGGTGCGCCTGACCTCGGCCGACGCCGCCAAGGGCAAGGTg                           <  1:1560/149‑1 (MQ=255)                                                                                                                           gCAACGACAGCGAACGGGCCGGCAACATCGTGCGGGCGCTGCGGTCCCTGGCCAAGCAGTCACCGATGCAACTCAAGGCGGTGAAGCTGGACGAAATGATCCGCGAGGTGGTGCGCCTGACCTCGGCCGACGCCGCCAAGGGCAAGGTg                           >  5:173537/1‑149 (MQ=255)                                                                                                                             aaCGACAGCGAACGGGCCGGCAACATCGTGCGGGCGCTGCGGTCCCTGGCCAAGCAGTCACCGATGCAACTCAAGGCGGTGAAGCTGGACGAATTGATCCGCGAGGTGGTGCGCCTGACCTCGGCCGACGCCGCCAAGGGCAAGGTGGa                         >  5:210187/1‑149 (MQ=255)                                                                                                                              cggatgtcttccaggccggcaaCATCGTGCGGGCGCTGCGGTCCCTGGCCAAGCAGTCACCGATGCAACTCAAGGCGGTGAAGCTGGACGAATTGATCCGCGAGGTGGTGCGCCTGACCTCGGCCGACGCCGCCAAGGGCAAGGTGGAt                        <  4:361722‑M2/127‑1 (MQ=255)                                                                                                                              aCGACAGCGAACGGGCCGGCAACATCGTGCGGGCGCTGCGGTCCCTGGCCAAGCAGTCACCGATGCAACTCAAGGCGGTGAAGCTGGACGAATTGATCCGCGAGGTGGTGCGCCTGACCTCGGCCGACGCCGCCAAGGGCAAGGTGGAt                        <  5:233411/149‑1 (MQ=255)                                                                                                                                      gAACGGGCCGGCAACATCGTGCGGGCGCTGCGGTCCATGGCCAAGCAGTCACCGATGCAACTCAAGGCGGTGAAGCTGGACGAATTGATCCGCGAGGTGGTCCGCCTGACCTCGGCCGACGCCTCCAAGGGCAAGGTGGATGTGCAGa                 >  7:219129/1‑148 (MQ=255)                                                                                                                                          gggacggcaaCATCGTGCGGGCGCTCCGGTCCCTGGCCAAGCAGTCACCGATGCAACTCAAGCCGCTGAAGCTGGACGAATTGATCCTCGAGGAGGTGCGCCTGACCTCGGCCGACGCAGCCAAGGGCAAGGTGGATGTGCAGACAcgc            >  5:226957‑M2/11‑148 (MQ=255)                                                                                                                                          gggCCGGCAACATCGTGCGGGCGCTGCGGTCCCTGGCCAAGCAGTCACCGATGCAACTCAAGGCGGTGAAGCTGGACGAATTGATCCGCGAGGTGGTGCGCCTGGCCTCGGCCGACGCCGCCAAGGGCAAGGTGGATGTGCAGACACgg            <  4:23453/149‑1 (MQ=255)                                                                                                                                             ccggcaaCATCGTGCGGGCGCTGCGGTCCCTGGCCAAGCAGTCACCGATGCAACTCAAGGCGGTGAAGCTGGACGAATTGATCCGCGAGGTGGTGCGCCTGACCTCGGCCGACGCCGCCAAGGGCAAGGTGGATGTGCAGACACGGCTg         <  3:85912‑M2/142‑1 (MQ=255)                                                                                                                                              cggcaaCATCGTGCGGGCGCTGCGGTCCCTGGCCAAGCAGTCACCGATGCAACTCAAGGCGGTGAAGCTGGACGAATTGATCCGCGAGGTGGTGCGCCTGACCTCGGCCGACGCCGCCAAGGGCAAGGTGTATGTGCAGACACGGCTGa        <  6:26321‑M2/143‑1 (MQ=255)                                                                                                                                               ggcaaCATCGTGCGGGCGCTGCGGTCCCTGGCCAAGCAGTCACCGATGCAACTCAAGGCGGTGAAGCTGGACGAATTGATCCGCGAGGTGGTGCGCCTGACCTCGGCCGACGCCGCCAAGGGCAAGGTGGATGTGCAGACACGGCTGaa       <  5:213870‑M2/144‑1 (MQ=255)                                                                                                                                               ggcaaCATCGTGCGGGCGCTGCGGTCCCTGGCCAAGCAGTCACCGATGCAACTCAAGGCGGTGAAGCTGGACGAATTGATCCGCGAGGTGGTGCGCCTGACCTCGGCCGACGCCGCCAAGGGCAAGGTGGATGTGCAGACACGGCTGaa       <  7:306878‑M2/144‑1 (MQ=255)                                                                                                                                               ggcaaCATCGTGCGGGCGCTGCGGTCCCTGGCCAAGCAGTCACCGATGCAACTCAAGGCGGTGAAGCTGCACGAATTGATCCGCGAGGTGGTGCGCCTGACCTCGGCCGACGCCGCCAAGGGCAAGGTGGATGTGCAGACACGGCTg         >  2:74567‑M2/6‑147 (MQ=255)                                                                                                                                                gcaaCATCGTGCGGGCGCTGCGGTCCCTGGCCAAGCAGTCACCGATGCAACTCAAGGCGGTGAAGCTGGACGAATTGATCCGCGAGGTGGTGCGCCTGACCTCGGCCGACGCCGCCAAGGGCAAGGTGGATGTGCAGACACGGCTGAAg      >  8:128323‑M2/5‑149 (MQ=255)                                                                                                                                                gcaaCATCGTGCGGGCGCTGCGGTCCCTGGCCAAGCAGTCACCGATGCAACTCAAGGCGGTGAAGCTGGACGAATTGATCCGCGAGGTGGTGCGCCTGACCTCGGCCGACGCCGCCAAGGGCAAGGTGGATGTGCAGACACGGCTGAAg      >  1:209267‑M2/5‑149 (MQ=255)                                                                                                                                                gcaaCATCGTGCGGGCGCTGCGGTCCCTGGCCAAGCAGTCACCGATGCAACTCAAGGCGGTGAAGCTGGACGAATTGATCCGCGAGGTGGTGCGCCTGACCTCGGCCGACGCCGCCAAGGGCAAGGTGGATGTGCAGACACGGCTGAAg      >  2:24836‑M2/5‑149 (MQ=255)                                                                                                                                                    cATCGTGCGGGCGCTGCGGTCCCTGGCCAAGCAGTCACCGATGCAACTCAAGGCGGTGAAGCTGGACGAATTGATCCGCGAGGTGGTGCGCCTGACCTCGGCCGACGCCGCCAAGGGCAAGGTGGATGTGCAGACACGGCTGAAGGCCg  <  4:178848/149‑1 (MQ=255)                                                                                                                                                    |                                                                                                                                                     CATCGCCCACGAGATCAGCCAGCCGCTCCTGGGCATCGCCTCCAATGCCGCGGCCAGCCTGCGCTGGCTCAAACGCGCCAAACCCGACCTGGAAGAAGCGATTGCCGGCCTGGAAGACATCCGCAACGACAGCGAACGGGCCGGCAACATCGTGCGGGCGCTGCGGTCCCTGGCCAAGCAGTCACCGATGCAACTCAAGGCGGTGAAGCTGGACGAATTGATCCGCGAGGTGGTGCGCCTGACCTCGGCCGACGCCGCCAAGGGCAAGGTGGATGTGCAGACACGGCTGAAGGCCG  >  NC_002947/5983759‑5984054

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.