New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 1499507 =17 (0.280)10 (0.180) 4/240 NT 17.6% intergenic (+84/‑80) trpS/zapE tryptophan‑‑tRNA ligase/nucleoside triphosphate hydrolase domain‑containing protein
?NC_002947 = 6060505 78 (1.420)intergenic (+141/+40) PP_5311/PP_5312 signal transduction protein/hypothetical protein

Only 100 of 104 total aligned reads displayed.

CGCATTAAGCATTAACACATAGCCTGCGGGAGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGA‑‑CTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCG‑CGTC‑GCTTGT‑TTCG‑CGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACCACATCACCAGCGCCGGGTTGCCCTTGATCTGGATGTGCTTGTCCTGAATCCCTTGCATGA  >  NC_002947/6060357‑6060651
                                                                                                                                                          |                                                                                                                                                  
cGCATTAAGCATTAACACATAGCCTGCGGGAGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGA‑‑CTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCG‑CGTC‑GCTTGT‑TTCG‑CGGGCACGc                                                                                                                                                    <  3:227409/149‑1 (MQ=255)
 gcattaagcattaaCACATAGCCTGCGGGAGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGA‑‑CTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCG‑CGTC‑GCTTGT‑TTCG‑CGGGCACGCc                                                                                                                                                   >  4:290816‑M2/1‑148 (MQ=255)
    ttaagcattaaCACATAGCCTGCGGGAGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGA‑‑CTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGCAGCCCGTGCCATGCACCC‑CGTA‑GCGTGT‑TTAG‑CGGGCACGCcccg                                                                                                                                                <  4:3912‑M2/149‑5 (MQ=255)
         cattaaCACATAGCCTGCGGGAGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGA‑‑CTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCG‑CGTC‑GCTTGT‑TTCG‑CGGGCACGCccgctccca                                                                                                                                           >  1:54125‑M2/1‑140 (MQ=255)
          attaaCACATAGCCTGCGGGAGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGAGGCTGTGGGAGCGGGCTTGCCAGCGAACACCGGCGAAGCCGGTGCCATGCACCG‑CGTC‑GCTTGT‑TTCG‑CGGGCACGCccgctcc                                                                                                                                             <  1:302954‑M2/148‑8 (MQ=255)
          attaaCACATAGCCTGCGGGAGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGA‑‑CTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCG‑CGTC‑GCTTGT‑TTCG‑CGGGCACGCccgctcccac                                                                                                                                          >  2:325499‑M2/1‑139 (MQ=255)
           ttaaCACATAGCCTGCGGGAGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGA‑‑CTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCG‑CGTC‑GCTTGT‑TTCG‑CGGGCACGCccgctccca                                                                                                                                           <  4:114308‑M2/147‑10 (MQ=255)
                acaTAGCCTGCGGGAGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGA‑‑CTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCG‑CGTC‑GCTTGT‑TTCG‑CGGGCACGCCCGCTCCCACAGGTa                                                                                                                                     >  2:93293/1‑148 (MQ=255)
                acaTAGCCTGCGGGAGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGA‑‑CTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCG‑CGTC‑GCTTGT‑TTCG‑CGGGCACGCCCGCTCCCACAGGTa                                                                                                                                     >  3:172992/1‑148 (MQ=255)
                acaTAGCCTGCGGGAGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGA‑‑CTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCG‑CGTC‑GCTTGT‑TTCG‑CGGGCACGCCCGCTCCCACAGGTa                                                                                                                                     >  1:70987/1‑148 (MQ=255)
                   tAGCCTGCGGGAGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGA‑‑CTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCG‑CGTC‑GCTTGT‑TTCG‑CGGGCACGCCCGCTCCCACAGGTAAAGc                                                                                                                                 <  3:42081/149‑1 (MQ=255)
                      ccTGCTGGAGCAACTGTCTTGCTCAATTGCTACCAGCTGGCGCGATTTTGGA‑‑CTGGGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCG‑CGTC‑GCTTGT‑TTCG‑CGGGCACGCCCGCTCCCACAGGTAAAGCGtc                                                                                                                              <  4:121405/149‑1 (MQ=255)
                       cTGCGGGAGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGA‑‑CTGTGGGAGCGGGCTTTCCCGCGAACACCGGCGAAGCCGGTGCCATTCACCG‑CGTA‑GCTTTT‑TTAG‑CGGGCACCCCCGCTCCCACAGGTAAAGCGtc                                                                                                                              >  8:229689/1‑148 (MQ=25)
                        tGCGGGAGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGA‑‑CTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCG‑CGTC‑GCTTGT‑TTCG‑CGGGCACGCCCGCTCCCACAGGTAAAGCGtca                                                                                                                             >  1:170975/1‑148 (MQ=255)
                          cGGGAGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGA‑‑CTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCG‑CGTC‑GCTTGT‑TTCG‑CGGGCACGCCCGCTCCCACAGGTAAAGCGtcatc                                                                                                                           <  3:3912/148‑1 (MQ=255)
                               gCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGA‑‑CTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCG‑CGTC‑GCTTGT‑TTCG‑CGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATcccc                                                                                                                     >  8:85140/1‑149 (MQ=255)
                               gCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGA‑‑CTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCG‑CGTC‑GCTTGT‑TTCG‑CGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATcccc                                                                                                                     <  7:164932/149‑1 (MQ=255)
                                 aaCTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGA‑‑CTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCG‑CGTC‑GCTTGT‑TTCG‑CGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGt                                                                                                                   >  8:42807/1‑149 (MQ=255)
                                 aaCTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGA‑‑CTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCG‑CGTC‑GCTTGT‑TTCG‑CGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGt                                                                                                                   >  7:95229/1‑149 (MQ=255)
                                    tGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGA‑‑CTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCG‑CGTC‑GCTTGT‑TTCG‑CGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCgg                                                                                                                >  7:147195/1‑149 (MQ=255)
                                           cTCAATTTCTAACAGCTGGCGCGATTTTGGA‑‑CTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCG‑CGTC‑GCTTGT‑TTCGTCGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCa                                                                                                          <  1:93293/149‑1 (MQ=255)
                                            tCAATTTCTAACAGCTGGCGCGATTTTGGA‑‑CTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCG‑CGTC‑GCTTGT‑TTCG‑CGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGc                                                                                                        >  6:94908/1‑149 (MQ=255)
                                            tCAATTTCTAACAGCTGGCGCGATTTTGGA‑‑CTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCG‑CGTC‑GCTTGT‑TTCG‑CGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGc                                                                                                        >  3:46674/1‑149 (MQ=255)
                                            tCAATTTCTAACAGCTGGCGCGATTTTGGA‑‑CTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCG‑CGTC‑GCTTGT‑TTCG‑CGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGc                                                                                                        >  5:79662/1‑149 (MQ=255)
                                            tCAATTTCTAACAGCTGGCGCGATTTTGGA‑‑CTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCG‑CGTC‑GCTTGT‑TTCG‑CGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGc                                                                                                        >  7:143866/1‑149 (MQ=255)
                                            tCAATTTCTAACAGCTGGCGCGATTTTGGA‑‑CTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCG‑CGTC‑GCTTGT‑TTCG‑CGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGc                                                                                                        >  1:333246/1‑149 (MQ=255)
                                              aaTTTCTAACAGCTGGCGCGATTTTGGA‑‑CTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCG‑CGTC‑GCTTGT‑TTCG‑CGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGc                                                                                                        <  1:36557/147‑1 (MQ=255)
                                               aTTTCTAACAGCTGGCGCGATTTTGGA‑‑CTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCG‑CGTC‑GCTTGT‑TTCG‑CGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCtt                                                                                                     >  5:79487/1‑149 (MQ=255)
                                                tttCTAACAGCTGGCGCGATTTTGGA‑‑CTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCG‑CGTC‑GCTTGT‑TTCG‑CGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAACCtt                                                                                                     >  4:110884/1‑148 (MQ=255)
                                                  tCTAACAGCTGGCGCGATTTTGGA‑‑CTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCG‑CGTC‑GCTTGT‑TTCG‑CGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTttc                                                                                                   <  4:32934/148‑1 (MQ=255)
                                                    tAACAGCTGGCGCGATTTTGGA‑‑CTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCG‑CGTC‑GCTTGT‑TTCG‑CGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGCCTTCAGCCTttcttc                                                                                                >  4:97182/1‑149 (MQ=255)
                                                      aCAGCTGGCGCGATTTTGGA‑‑CTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCG‑CGTC‑GCTTGT‑TTCG‑CGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTttctt                                                                                                 <  4:176117/146‑1 (MQ=255)
                                                      aCAGCTGGCGCGATTTTGGA‑‑CTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCG‑CGTC‑GCTTGT‑TTCG‑CGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTtcttct                                                                                               <  4:60640/148‑1 (MQ=255)
                                                      aCAGCTGGCGCGATTTTGGA‑‑CTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCG‑CGTC‑GCTTGT‑TTCG‑CGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTcttctt                                                                                              <  3:322504/149‑1 (MQ=255)
                                                       ctgCTGGCGCGATTTTGGA‑‑CTGTGGGAGCGTGCTTACCCGCGAACTCGGGCGAAGCCGGTGCCATGCACCG‑CGTC‑GCTTGT‑TTCG‑CGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTcttctt                                                                                              <  3:263642/146‑1 (MQ=255)
                                                       ctgCTGGAGCGTTTTTGGA‑‑CTGTGGGAGCGGGCTTGCGCGCGAACTCCGGCGAAGCCGTTGCCATGCACCG‑CGTC‑GCTTGT‑TTCG‑CGGGCACGCCGGCTCCCACAGGTAATGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCttt                                                                                             <  8:314591/147‑1 (MQ=255)
                                                       cAGCTGGCGCGATTTTGGA‑‑CTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCG‑CGTC‑GCTTGT‑TTCG‑CGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCttt                                                                                             <  5:19989/149‑1 (MQ=255)
                                                       cAGCTGGCGCGATTTTGGA‑‑CTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCG‑CGTC‑GCTTGT‑TTCG‑CGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCttt                                                                                             <  4:46674/149‑1 (MQ=255)
                                                              cgcgATTTTGGA‑‑CTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCG‑CGTC‑GCTTGT‑TTCG‑CGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCa                                                                                      <  2:302954/149‑1 (MQ=255)
                                                              cgcgATTTTGGA‑‑CTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCG‑CGTC‑GCTTGT‑TTCG‑CGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCa                                                                                      <  7:85140/149‑1 (MQ=255)
                                                               gcgATTTTGGA‑‑CTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCG‑CGTC‑GCTTGT‑TTCG‑CGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAg                                                                                     <  2:333246/149‑1 (MQ=255)
                                                               gcgATTTTGGA‑‑CTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCG‑CGTC‑GCTTGT‑TTCG‑CGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAg                                                                                     <  2:108964/149‑1 (MQ=255)
                                                                   ttttGGA‑‑CTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCG‑CGTC‑GCTTGT‑TTCG‑CGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTAt                                                                                 <  8:147195/149‑1 (MQ=255)
                                                                      tGGA‑‑CTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCG‑CGTC‑GCTTGT‑TTCG‑CGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGt                                                                                   <  1:159887/144‑1 (MQ=255)
                                                                      tGGA‑‑CTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCG‑CGTC‑GCTTGT‑TTAG‑CGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGt                                                                                   >  2:159887/1‑144 (MQ=255)
                                                                       ggA‑‑CTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCG‑CGTC‑GCTTGT‑TTCG‑CGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTtc                                                                              <  8:24056/148‑1 (MQ=255)
                                                                        gA‑‑CTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCG‑CGTC‑GCTTGT‑TTCG‑CGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTtcat                                                                            <  3:293698/149‑1 (MQ=255)
                                                                        gA‑‑CTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCG‑CGTC‑GCTTGT‑TTCG‑CGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTtca                                                                             <  8:143866/148‑1 (MQ=255)
                                                                         a‑‑CTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCG‑CGTC‑GCTTGT‑TTCG‑CGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTtcatc                                                                           <  2:170975/149‑1 (MQ=255)
                                                                             tgtgGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCG‑CGTC‑GCTTGT‑TTCG‑CGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCaa                                                                         >  4:263021/1‑149 (MQ=255)
                                                                               tgGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCG‑CGTC‑GCTTGT‑TTCG‑CGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAAc                                                                        <  2:374148/148‑1 (MQ=255)
                                                                               tgGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCG‑CGTC‑GCTTGT‑TTCG‑CGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCAGCAAcc                                                                       >  4:106855/1‑149 (MQ=255)
                                                                                 ggAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCG‑CGTC‑GCTTGT‑TTCG‑CGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAAcccc                                                                     >  2:223122/1‑149 (MQ=255)
                                                                                  gAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCG‑CGTC‑GCTTGT‑TTCG‑CGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCt                                                                    <  4:336734/149‑1 (MQ=255)
                                                                                  gAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCG‑CGTC‑GCTTGT‑TTCG‑CGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCt                                                                    <  6:22945/149‑1 (MQ=255)
                                                                                  gAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCG‑CGTC‑GCTTGT‑TTCG‑CGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCt                                                                    <  7:229689/149‑1 (MQ=255)
                                                                                  gAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCG‑CGTC‑GCTTGT‑TTCG‑CGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACACCt                                                                    >  7:165680/1‑149 (MQ=255)
                                                                                    gCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCG‑CGTC‑GCTTGT‑TTCG‑CGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTg                                                                   >  1:53548/1‑148 (MQ=255)
                                                                                      gggCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCG‑CGTC‑GCTTGA‑TTCG‑CGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGaa                                                                <  1:128873/149‑1 (MQ=255)
                                                                                       ggCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCG‑CGTC‑GCTTGT‑TTCG‑CGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTtc                                                                              >  5:219344/1‑134 (MQ=255)
                                                                                       ggCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCG‑CGTC‑GCTTGT‑TTCG‑CGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTtc                                                                              <  6:219344/134‑1 (MQ=255)
                                                                                        gCGTGCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCG‑CGGC‑GCCTGT‑TTCG‑CGGGCACGCccgctcccacagactgattgccattaagcgggcctatcgctacagtgccggcccggtttttgttgcctcgctaacgaatcatgact                                                              <  7:191629‑M2/149‑87 (MQ=255)
                                                                                          ttGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCG‑CGTC‑GCTTGT‑TTCG‑CGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACcac                                                            <  1:278139/149‑1 (MQ=255)
                                                                                              ccGCGAACACCGGCGAAGCCGGTGCCATGCACCG‑CGTC‑GCTTGT‑TTCG‑CGGGCACGCCCGCTCCCCCAGGTAAAGCGTCATCATCCCCCTCGGGCTTCAGCCTTTCTTCTTTGGTATCAGGTATTTCATCAACCACTGGAACCacaaca                                                        >  1:142661/1‑149 (MQ=37)
                                                                                              ccGCGAACACCGGCGAAGCCGGTGCCATGCACCG‑CGTC‑GCTTGT‑TTCG‑CGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACCACATCa                                                        >  3:363185/1‑149 (MQ=255)
                                                                                               cgcgAACACCGGCGAAGCCGGTGCCATGCACCG‑CGTC‑GCTTGT‑TTCG‑CGTGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAACCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACCACATCAc                                                       <  3:110884/149‑1 (MQ=255)
                                                                                               cgcgAACACCGGCGAAGCCGGTGCCATGCACCG‑CGTC‑GCTTGT‑TTCG‑CGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACCACATCAc                                                       >  6:176117/1‑149 (MQ=255)
                                                                                                gcgAACACCGGCGAAGCCGGTGCCATGCACCG‑CGTC‑GCTTGT‑TTCG‑CGGGCACGCCCGCTCCCGCAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACCACATCAc                                                       >  5:165053/1‑148 (MQ=255)
                                                                                                 cgAACACCGGCGAAGCCGGTGCCATGCACCG‑CGTC‑GCTTGT‑TTCG‑CGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACCACATCACCa                                                     <  3:114308/149‑1 (MQ=255)
                                                                                                 cgAACACCGGCAAAGCCGGTGCCATGCACCG‑CGGC‑GCCTGT‑TTCG‑CGGGCACGCccgctcccacagactgattgccattaagcgggcctatcgctacagtgacggcccgttttttgttgcctcgctaacgaatcatgactcccttagaa                                                     <  1:317476‑M2/149‑96 (MQ=255)
                                                                                                 cgAACACAGGCGAAGCCGGTGCCATGCACCG‑CGTC‑GCTTCT‑TTCG‑AGGGCACGCCCGCTCCCACAGGTAAAGCCTCATCATCCCAGTCGGGCATCAGCCTTTCTTCATTGGTATCAGCTATTTCATCAACCCCTGGAACCACATAAc                                                       >  5:145334/1‑147 (MQ=37)
                                                                                                  tggcacCGGCTTCGCCGGTGCCATGCACCG‑CGTC‑GCTTGT‑TTCG‑CGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACCACATCACCAg                                                    >  7:321113/4‑149 (MQ=255)
                                                                                                  gAACACCGGCAAAGCCGGTGCCATGCACCG‑CGGC‑GCCTGT‑TTCG‑CGGGCACGCccgctcccacagactgattgccattaagcgggcctatcgctacagtgacggcccgttttttgttgcctcgctaacgaatcatgactcccttagaac                                                    <  3:305016‑M2/149‑97 (MQ=255)
                                                                                                       ccGGCAAAGCCGGTGCCATGCACCG‑CGGC‑GCCTGT‑TTCG‑CGGGCACGCccgctcccacagactgattgccattaagcgggcctatcgctacagtgacggcccgttttttgttgcctcgctaacgaatcatgactcccttagaacgctat                                               >  2:317476‑M2/1‑48 (MQ=255)
                                                                                                        cGGCGAAGCCGGTGCCATGCACCG‑CGTC‑GCTTGT‑TTCG‑CGGGCACGCCCGCTCCCACAGGTAAAGCGTCCTCATCCCCGTCGGGCTTCAGCCTTTCATCTTTGGTTTCAGGAATTTCATCAACCCCTGGAACCACATCACCAGCGCCgg                                              >  3:282152/1‑149 (MQ=255)
                                                                                                        cGGCGAAGCCGGTGCCATGCACCG‑CGTC‑GCTTGT‑TTCG‑CGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACCACATCACCAGCGCCgg                                              >  7:323356/1‑149 (MQ=255)
                                                                                                            gAAGCCGGTGCCATGCACCG‑CGTC‑GCTTGT‑TTCG‑CGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACCACATCACCAGCGCCGGGTTg                                          >  1:152133/1‑149 (MQ=255)
                                                                                                            caccccggtgCCATGCACCG‑CGGC‑GCCTGT‑TTCG‑CGGGCACGCccgctcccacagactgattgccattaagcgggcctatcgctacagtgacggcccgttttttgttgcctcgctaacgaatcatgactcccttagaacgctatcaag                                           >  8:52161‑M2/5‑43 (MQ=255)
                                                                                                            aaagCCGGTGCCATGCACCG‑CGGCAGCCTGT‑TTCG‑CGGGCACGCccgctcccacagactgattgccattaagcgggcctatcgctacagtgacggcccgttttttgttgcctcgctaacgaatcatgactcccttagaacgctatcaag                                           <  7:52161‑M2/148‑106 (MQ=255)
                                                                                                               gCCGGTGCCATGCACCGGCTTT‑GCCGGTGTTCG‑CGGGCACGCcgcgctcccacagactgattgccattaagcgggcctatcgctacagtgacggcccgttttttgttgcctcgctaacgaatcatgactcccttagaacgctatcaag                                          <  1:72447‑M2/148‑107 (MQ=255)
                                                                                                                      ccATGCACCG‑CGTC‑GCTTGT‑TTCG‑CGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACCACATCACCAGCGCCGGGTTGCCCTTGATCt                                <  6:79662/149‑1 (MQ=255)
                                                                                                                       cATGCACCG‑CGTC‑GCTTGT‑TTCG‑CGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACCACATCACCAGCGCCGGGTTGCCCTTGATCTg                               <  4:363185/149‑1 (MQ=255)
                                                                                                                        aTGCACCG‑CGTC‑GCTTGT‑TTCG‑CGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACCACATCACCAGCGCCGGGTTGCCCTTGATCTg                               >  5:303152/1‑148 (MQ=255)
                                                                                                                        aTGCACCG‑CGTC‑GCTTGT‑TTCG‑CGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCGTCAGCCGTTCTTCTTTGGTTTCAGGTATTTCATCACCCCCTGGAACCACATCACCAGCGCCGGGTTGCCCTTGATCTg                               >  5:308168/1‑148 (MQ=255)
                                                                                                                            aCCG‑CGTC‑GCTTGT‑TTCG‑CGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACCACATCACCAGCGCCGGGTTGCCCTTGATCTGGAtgt                          >  3:230231/1‑149 (MQ=255)
                                                                                                                            aCCG‑CGTC‑GCTTGT‑TTCG‑CGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACCACATCACCAGCGCCGGGTTGCCCTTGATCTGGAtgt                          <  3:97182/149‑1 (MQ=255)
                                                                                                                            aCCG‑CGTC‑GCTTGT‑TTCG‑CGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACCACATCACCAGCGCCGGGTTGCCCTTGATCTGGAtgt                          <  4:299810/149‑1 (MQ=255)
                                                                                                                              cg‑cgTC‑GCTTGT‑TTCG‑CGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACCACATCACCAGCGCCGGGTTGCCCTTGATCTGGATGTGc                        <  1:223122/149‑1 (MQ=255)
                                                                                                                              cg‑cgTC‑GCTTGT‑TTCG‑CGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACCACATCACCAGCGCCGGGTTGCCCTTGATCTGGATGTGc                        <  4:186817/149‑1 (MQ=255)
                                                                                                                              cg‑cgTC‑GCTTGT‑TTCG‑CGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACCACATCACCAGCGCCGGGTTGCCCTTGATCTGGATGTGc                        <  6:165053/149‑1 (MQ=255)
                                                                                                                                       cTTGT‑TTCG‑CGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACCACATCACCAGCGCCGGGATGCGATTGATCTGGATGTGCTTGTCCt                 >  6:249908/1‑149 (MQ=255)
                                                                                                                                         ggtgttcg‑cgGGCACGCccgctcccacagactgattgccattaagcgggcctatcgctacagtgacggcccgttttttgttgcctcgctaacgaatcatgactcccttagaacgctatcaagcagatctgaaacgtcccgacttcttcc                >  7:225549‑M2/5‑17 (MQ=255)
                                                                                                                                          gT‑TTCG‑CGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACCACATCACCAGCGCCGGGTTGCCCTTGATCTGGATGTGCTTGTCCTg                <  7:42807/147‑1 (MQ=255)
                                                                                                                                             ggag‑cgggcGTGCccgctcccacagactgattgccattaagcgggcctatcgctacagtgacggcccgttttttgttgactcgctaacgaatcatgactcccttagaacgctatcaagcagatctgaaacgtcccgacttcttcaatga            <  5:262252‑M2/146‑137 (MQ=255)
                                                                                                                                               cg‑cgGGCACGCccgctcccacagactgattgccattaagcgggcctatcgctacagtgacggcccgttttttgttgcctcgctaacgaatcaggactcccttagaacgctatctagcagagctgaaacgtcccgacttcttccatgacg          <  5:235527‑M2/149‑139 (MQ=255)
                                                                                                                                                  cgGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACCACATCACCAGCGCCGGGTTGCCCTTGATCTGGATGTGCTTGTCCTGAATCCCtt        <  3:249941/149‑1 (MQ=255)
                                                                                                                                                       ccGCCCGCTCCCACAGGTAAAGCGTAATCATCACCTTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACCACATCACCAGCGCCGGGTTGCCCTTGATCTGGATGTGCTTGTCCTGAATCCCTTGCATg   <  6:308168/148‑1 (MQ=255)
                                                                                                                                                       aCGCccgctcccacagactgattgccattaagcgggcctatcgctacagtgacggcccgttttttgttgcctcgctaacgaatcatgactcccttagaacgctatcaagcagatctgaaacgtcccgacttcttccatgacgcggcgca   >  3:27905‑M2/1‑4 (MQ=255)
                                                                                                                                                         gCccgctcccacagactgattgccattaagcgggcctatcgctacagtgacggcccgttttttgttgcctcgctaacgaatcatgactcccttagaacgctatcaagcagatctgaaacgtcccgacttcttccatgacgcggcgcag  <  6:347509‑M2/148‑147 (MQ=255)
                                                                                                                                                         gCccgctcccacagactgattgccattaagcgggcctatcgctacagtgacggcccgttttttgttgcctcgctaacgaatcatgactcccttagaacgctatcaagcagatctgaaacgtacctcattcttccatgacgcggcgcag  <  3:228207‑M2/148‑147 (MQ=255)
                                                                                                                                                          |                                                                                                                                                  
CGCATTAAGCATTAACACATAGCCTGCGGGAGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGA‑‑CTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCG‑CGTC‑GCTTGT‑TTCG‑CGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACCACATCACCAGCGCCGGGTTGCCCTTGATCTGGATGTGCTTGTCCTGAATCCCTTGCATGA  >  NC_002947/6060357‑6060651

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.