New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1628248	60 (1.000)	4 (0.070)	4/252	NT	6.5%	coding (361/591 nt)	mucA	sigma factor AlgU negative regulator
	?	NC_002947	= 1628296	57 (0.990)					coding (409/591 nt)	mucA	sigma factor AlgU negative regulator

TCTGGCGGTAGCCGCCTCGGTTACCGTCGCGGTACTGGCCGGTGTGCGTATGTACAACCAGGACGAAATCACGGGTGCAGAGCTTGCTGCCCAGCAGC‑CTGTCCAACAGGGCCTGAGTGTGCCACAAGCGCAAGGCCCGGCCGTTTTGGCAGGCTATAGTGAAAGC‑AGTGAGCAACCGACCGGGCCAA‑TGGCCAATGGCGTGCTGCAGAACCAGGCCGGCTGGGATCAGCGTCTGCCAGGCTACCTGCGCCAGCATGCCCAGGAATCTGCGCTCAAGGGCACTGAAACCGCATTGCC  >  NC_002947/1628148‑1628444                                                                                                                                                      |                                                                                                                                                       tCTGGCGGTAGCCGCCTCGGTTACCGTCGCGGTACTGGCCGGTGTGCGTATGTACAACCAGGACGAAATCACGGGTGCAGAGCTTGCTGCCCAGCAGC‑CTGTCCAACAGGGCCTGAGTGTGCCACAAGCGCAAGGCCCGGCCGTTTTgg                                                                                                                                                        <  1:60990/149‑1 (MQ=255)     gCGGTAGCCGCCTCGGTTACCGTCGCGGTACTGGCCGGTGTGCGTATGTACAACCAGGACGAAATCACGGGTGCAGAGCTTGCTGCCCAGCAGC‑CTGTCCAACAGGGCCTGAGTGTGCCACAAGCGCAAGGCCCGGCCGTTTTGGca                                                                                                                                                      >  5:72874‑M2/1‑145 (MQ=255)           gccgccTCGGTTACCGTCGCGGTACTGGCCGGTGTGCGTATGTACAACCAGGACGAAATCACGGGTGCAGAGCTTGCTGCCCAGCAGC‑CTGTCCAACAGGGCCTGAGTGTGCCACAAGCGCAAGGCCCGGCCGTTTTGGCAGGCtata                                                                                                                                               <  6:126422/148‑1 (MQ=255)           gccgccTCGGTTACCGTCGCGGTACTGGCCGGTGTGCGTATGTACAACCAGGACGAAATCACGGGTGCAGAGCTTGCTGCCCAGCAGC‑CTGTCCAACAGGGCCTGAGTGTGCCACAAGCGCAAGGCCCGGCCGTTTTGGCAGGCTATAg                                                                                                                                              <  3:193001/149‑1 (MQ=255)               ccTCGGTTACCGTCGCGGTACTGGCCGGTGTGCGTATGTACAACCAGGACGAAATCACGGGTGCAGAGCTTGCTGCCCAGCAGC‑CTGTCCAACAGGGCCTGAGTGTGCCAGAAGCGCAAGGCCCGGCCGTTTTGGCAGGCTATAGTGaa                                                                                                                                          <  6:269606/149‑1 (MQ=255)                 tCGGTTACCGTCGCGGTACTGGCCGGTGTGCGTATGTACAACCAGGACGAAATCACGGGTGCAGAGCTTGCTGCCCAGCAGC‑CTGTCCAACAGGGCCTGAGTGTGCCACAAGCGCAAGGCCCGGCCGTTTTGGCAGGCTATAGTGAAAg                                                                                                                                        >  4:174336/1‑149 (MQ=255)                  cGGTTACCGTCGCGGTACTGGCCGGTGTGCGTATGTACAACCAGGACGAAATCACGGGTGCAGAGCTTGCTGCCCAGCAGC‑CTGTCCAACAGGGCCTGAGTGTGCCACAAGCGCAAGGCCCGGCCGTTTTGGCAGGCTATAGTGAAAg                                                                                                                                        >  5:214643/1‑148 (MQ=255)                        ccGTCGCGGTACTGGCCGGTGTGCGTATGTACAACCAGGACGAAATCACGGGTGCAGAGCTTGCTGCCCAGCAGC‑CTGTCCAACAGGGCCTGAGTGTGCCACAAGCGCAAGGCCCGGCCGTTTTGGCAGGCTATAGTGAAAGC‑AGTGa                                                                                                                                 <  1:246561/148‑1 (MQ=255)                        ccGTCGCGGTACTGGCCGGTGTGCGTATGTACAACCAGGACGAAATCACGGGTGCAGAGCTTGCTGCCCAGCAGC‑CTGTCCAACAGGGCCTGAGTGTGCCACAAGCGCAAGGCCCGGCCGTTTTGGCAGGCTATAGTGAAAGC‑AGTGa                                                                                                                                 <  4:199203/148‑1 (MQ=255)                        ccGTCGCGGTACTGGCCGGTGTGCGTATGTACAACCAGGACGAAATCACGGGTGCAGAGCTTGCTGCCCAGCAGC‑CTGTCCAACAGGGCCTGAGTGTGCCACAAGCGCAAGGCCCGGCCGTTTTGGCAGGCTATAGTGAAAGC‑AGTGAg                                                                                                                                <  6:207830/149‑1 (MQ=255)                         cGTCGCGGTACTGGCCGGTGTGCGTATGTACAACCAGGACGAAATCACGGGTGCAGAGCTTGCTGCCCAGCAGC‑CTGTCCAACAGGGCCTGAGTGTGCCACAAGCGCAAGGCCCGGCCGTTTTGGCAGGCTATAGTGAAAGC‑AGTGAg                                                                                                                                >  5:35622/1‑148 (MQ=255)                          gTCGCGGTACTGGCCGGTGTGCGTATGTACAACCAGGACGAAATCACGGGTGCAGAGCTTGCTGCCCAGCAGC‑CTGTCCAACAGGGCCTGAGTGTGCCACAAGCGCAAGGCCCGGCCGTTTTGGCAGGCTATAGTGAAAGC‑AGTGAGc                                                                                                                               >  1:139752/1‑148 (MQ=255)                          gTCGCGGTACTGGCCGGTGTGCGTATGTACAACCAGGACGAAATCACGGGTGCAGAGCTTGCTGCCCAGCAGC‑CTGTCCAACAGGGCCTGAGTGTGCCACAAGCGCAAGGCCCGGCCGTTTTGGCAGGCTATAGTGAAAGC‑AGTGAGCa                                                                                                                              <  7:331798/149‑1 (MQ=255)                          gTCGCGGTACTGGCCGGTGTGCGTATGTACAACCAGGACGAAATCACGGGTGCAGAGCTTGCTGCCCAGCAGC‑CTGTCCAACAGGGCCTGAGTGTGCCACAAGCGCAAGGCCCGGCCGTTTTGGCAGGCTATAGTGAAAGC‑AGTGAGCa                                                                                                                              <  6:35622/149‑1 (MQ=255)                             gcgGTACTGGCCGGTGTGCGTATGTACAACCAGGACGAAATCACGGGTGCAGAGCTTGCTGCCCAGCAGC‑CTGTCCAACAGGGCCTGAGTGTGCCACAAGCGCAAGGCCCGGCCGTTTTGGCAGGCTATAGTGAAAGC‑AGTGAGCAacc                                                                                                                           <  1:64067/149‑1 (MQ=255)                                gTACTGGCCGGTGTGCGTATGTACAACCAGGACGAAATCACGGGTGCAGAGCTTGCTGCCCAGCAGC‑CTGTCCAACAGGGCCTGAGTGTGCCACAAGCGCAAGGCCCGGCCGTTTTGGCAGGCTATAGTGAAAGC‑AGTGAGCAaccgac                                                                                                                        >  3:207472/1‑149 (MQ=255)                                 tACTGGCCGGTGTGCGTATGTACAACCAGGACGAAATCACGGGTGCAGAGCTTGCTGCCCAGCAGC‑CTGTCCAACAGGGCCTGAGTGTGCCACAAGCGCAAGGCCCGGCCGTTTTGGCAGGCTATAGTGAAAGC‑AGTGAGCAaccgacc                                                                                                                       >  6:62917/1‑149 (MQ=255)                                          gtgtGCGTATGTACAACCAGGACGAAATCACGGGTGCAGAGCTTGCTGCCCAGCAGC‑CTGTCCAACAGGGCCTGAGTGTGCCACAAGCGCAAGGCCCGGCCGTTTTGGCAGGCTATAGTGAAAGC‑AGTGAGCAACCGACCGggccaa‑tg                                                                                                             <  4:207472/149‑1 (MQ=255)                                                gTATGTACAACCAGGACGAAATCACGGGTGCAGAGCTTGCTGCCCAGCAGC‑CTGTCCAACAGGGCCTGAGTGTGCCACAAGCGCAAGGCCCGGCCGTTTTGGCAGGCTATAGTGAAAGC‑AGTGCGCAACCGACCGggccaa‑tggccaat                                                                                                       >  6:79990/1‑149 (MQ=255)                                                gTATGTACAACCAGGAAGAAATAAAGTCTGCAGAGCTTGCTGCCCAGCAGC‑CTGTCCAACAGGGCCTGAGTGTTCCACAAGAGCAAGGCCCGGCCGTTTTGGCAGGCTATAGTGAAAGC‑AGTGAGCAACCGACCGggccaa‑tggccaat                                                                                                       >  3:253906/1‑149 (MQ=255)                                                     tACAACCAGGACGAAATCACGGGTGCAGAGCTTGCTGCCCAGCAGC‑CTGTCCAACAGGGCCTGAGTGTGCCACAAGCGCAAGGCCCGGCCGTTTTGGCAGGCTATAGTGAAAGC‑AGTGAGCAACCGACCGGGCCAA‑TGGCCAATGGCGt                                                                                                  >  7:154895/1‑149 (MQ=255)                                                        aaCCAGGACGAAATCACGGGTGCAGAGCTTGCTGCCCAGCAGC‑CTGTCCAACAGGGCCTGAGTGTGCCACAAGCGCAAGGCCCGGCCGTTTTGGCAGGCTATAGTGAAAGC‑AGTGAGCAACCGACCGGGCCAA‑TGGCCAATGGCGtgct                                                                                               >  7:289222/1‑149 (MQ=255)                                                         aCCAGGACGAAATCACGGGTGCAGAGCTTGCTGCCCAGCAGC‑CTGTCCAACAGGGCCTGAGTGTGCCACAAGCGCAAGGCCCGGCCGTTTTGGCAGGCTATAGTGAAAGC‑AGTGAGCAACCGACCGGGCCAA‑TGGCCAATGGCGtgctg                                                                                              <  4:316294/149‑1 (MQ=255)                                                            aGGACGAAATCACGGGTGCAGAGCTTGCTGCCCAGCAGC‑CTGTCCAACAGGGCCTGAGTGTGCCACAAGCGCAAGGCCCGGCCGTTTTGGCAGGCTATAGTGAAAGC‑AGTGAGCAACCGACCGGGCCAA‑TGGCCAATGGCGtgctg                                                                                              >  8:290434/1‑146 (MQ=255)                                                             ggACGAAATCACGGGTGCAGAGCTTGCTGCCCAGCAGC‑CTGTCCAACAGGGCCTGAGTGTGCCACAAGCGCAAGGCCCGGCCGTTTTGGCAGGCTATAGTGAAAGC‑AGTGAGCAACCGACCGGGCCAA‑TGGCCAATGGCGTGCTGCata                                                                                          <  7:153807/149‑3 (MQ=255)                                                             ggACGAAATCACGGCTGCAGAGCTTGCTGCCCAGCAGC‑CTGTCCAACAGGGCCTGAGTGTGCCACAAGCGCAAGGCCCGGCCGTTTTGGCAGGCTATAGTGAACGC‑AGTGAGCAAACGACAGGGCCAA‑TGGCCAATGGCGTGcagcag                                                                                           >  7:142275/1‑148 (MQ=255)                                                              gACGAAATCACGGGTGCAGAGCTTGCTGCCCAGCAGC‑CTGTCCAACAGGGCCTGAGTGTGCCACAAGCGCAAGGCCCGGCCGTTTTGGCAGGCTATAGTGAAAGC‑AGTGAGCAACCGACCGGGCCAA‑TGGCCAATGGCGTGCTGCAGaa                                                                                         <  3:174336/149‑1 (MQ=255)                                                               aCGAAATCACGGGTGCAGAGCTTGCTGCCCAGCAGC‑CTGTCCAACAGGGCCTGAGTGTGCCACAAGCGCAAGGCCCGGCCGTTTTGGCAGGCTATAGTGAAAGC‑AGTGAGCAACCGACCGGGCcaa‑tggccaatggc                                                                                                    <  2:3453/137‑1 (MQ=255)                                                               aCGAAATCACGGGTGCAGAGCTTGCTGCCCAGCAGC‑CTGTCCAACAGGGCCTGAGTGTGCCACAAGCGCAAGGCCCGGCCGTTTTGGCAGGCTATAGTGAAAGC‑AGTGAGCAACCGACCGGGCcaa‑tggccaatggc                                                                                                    >  1:3453/1‑137 (MQ=255)                                                                   aaTCACGGGTGCAGAGCTTGCTGCCCAGCAGCTCTGTCCAACAGGGCCTGAGTGTGCCACAAGCGCAAGGCCCGGCCGTTTTGGCAGGCTATAGTGAAAGC‑AGTGAGCAACCGACCGGGCCAA‑TGGCCAATGGCGTGCTGCAGAACCAg                                                                                     >  1:46238/1‑149 (MQ=255)                                                                   aaTCACGGGTGCAGAGCTTGCTGCCCAGCAGC‑CTGTCCAACAGGGCCTGAGTGTGCCACAAGCGCAAGGCCCGGCCGTTTTGGCAGGCTATAGTGAAAGC‑AGTGAGCAACCGACCGGGCCAA‑TGGCCAATGGCGAGCTGCAGAACCAgg                                                                                    >  2:293487/1‑149 (MQ=255)                                                                       aCGGGTGCAGAGCTTGCTGCCCAGCAGC‑CTGTCCAACAGGGCCTGAGTGTGCCACAAGCGCAAGGCCCGGCCGTTTTGGCAGGCTATAGTGAAAGC‑AGTGAGCAACCGACCGGGCCAA‑TGGCCAATGGCGTGCTGCAGAACCAGGCCgg                                                                                <  7:144647/149‑1 (MQ=255)                                                                       aCGGGTGCAGAGCTTGCTGCCCAGCAGC‑CTGTCCAACAGGGCCTGAGTGTGCCACAAGCGCAAGGCCCGGCCGTTTTGGCAGGCTATAGTGAAAGC‑AGTGAGCAACCGACCGGGCCAA‑TGGCCAATGGCGTGCTGCAGAACCAGGCCg                                                                                 <  3:236621/148‑1 (MQ=255)                                                                        cGGGTGCAGAGCTTGCTGCCCAGCAGC‑CTGTCCAACAGGGCCTGAGTGTGCCACAAGCGCAAGGCCCGGCCGTTTTGGCAGGCTATAGTGAAAGC‑AGTGAGCAACCGACCGGGCCAA‑TGGCCAATGGCGTGCTGCAGAACCAGGCCGGc                                                                               >  7:11221/1‑149 (MQ=255)                                                                           gTGCAGAGCTTGCTGCCCAGCAGC‑CTGTCCAACAGGGCCTGAGTGTGCCACAAGCGCAAGGCCCGGCCGTTTTGGCAGGCTATAGTGAAAGC‑AGTGAGCAACCGACCGGGCCAA‑TGGCCAATGGCGTGCTGCAGAACCAGGCCGGCTgg                                                                            <  8:154895/149‑1 (MQ=255)                                                                           gTGCAGAGCTTGCTGCCCAGCAGC‑CTGTCCAACAGGGCCTGAGTGTGCCACAAGCGCAAGGCCCGGCCGTTTTGGCAGGCTATAGTGAAAGC‑AGTGAGCAACCGACCGGGCCAA‑TGGCCAATGGCGTGCTGCAGAACCAGGCCGGCTgg                                                                            <  2:139752/149‑1 (MQ=255)                                                                                  gCTTGCTGCCCAGCAGC‑CTGTCCAACAGGGCCTGAGTGTGCCACAAGCGCAAGGCCCGGCCGTTTTGGCAGGCTATAGTGAAAGC‑AGTGAGCAACCGACCGGGCCAA‑TGGCCAATGGCGTGCTGCAGAACCAGGCCGGCTGGGATCAGc                                                                     <  7:288491/149‑1 (MQ=255)                                                                                      gctgcCCAGCAGC‑CTGTCCAACAGGGCCTGAGTGTGCCACAAGCGCAAGGCCCGGCCGTTTTGGCAGGCTATAGTGAAAGC‑AGTGAGCAACCGACCGGGCCAA‑TGGCCAATGGCGTGCTGCAGAACCAGGCCGGCTGGGATCAGCGt                                                                   <  6:214643/147‑1 (MQ=255)                                                                                        tgcCCAGCAGC‑CTGTCCAACAGGGCCTGAGTGTGCCACAAGCGCAAGGCCCGGCCGTTTTGGcaggctgctgggcagcaagctctgcacccgtgatttcgtcctggttgtacatacgcacaccggccagtaccgcgacggtaaccgagg                                                                 <  4:227343‑M2/149‑88 (MQ=255)                                                                                        tgcCCAGCAGC‑CTGTCCAACAGGGCCTGAGTGTGCCACAAGCGCAAGGCCCGGCCGTTTTGGCAGGCTATAGTGAAAGC‑AGTGAGCAACCGACCGGGCCAA‑TGGCCAATGGCGTGCTGCAGAACCAGGCCGGCTGGGATCAGCGTCTGc                                                               >  8:121865/1‑149 (MQ=255)                                                                                             agcagc‑CTGTCCAACAGGGCCTGAGTGTGCCACAAGCGCAAGGCCCGGCCGTTTTGGcaggctgctgggcagcaagctctgcacccgtgatttcgtcctggttgtacatacgcacaccggccagtaccgcgacggtaaccgaggcggc                                                             <  7:72211‑M2/148‑92 (MQ=255)                                                                                             agcagc‑CTGTCCAACAGGGCCTGAGTGTGCCACAAGCGCAAGGCCCGGCCGTTTTGGCAGGCTATAGTGAAAGC‑AGTGAGCAACCGACCGGGCCAA‑TGGCCAATGGCGTGCTGCAGAACCAGGCCGGCTGGGATCAGCGTCTGCCAGGc                                                          >  8:169466/1‑149 (MQ=255)                                                                                                agc‑CTGTCCAACAGGGCCTGAGTGTGCCACAAGCGCAAGGCCCGGCCGTTTTGGcaggctgctgggcagcaagctctgcacccgtgatttcgtcctggttgtacatacgcacaccggccagtaccgcgacggtaaccgaggcggctacc                                                         <  1:258017‑M2/149‑96 (MQ=255)                                                                                                  ggcTGTCCAACCGGGCCGGAGTGTGCCACAAGCGCAAGGCCCGGCCGTTTTTGCAGGCTATAGTGCAAGC‑AGTGAGCAACCGACCGGGCCAATTGGCCAATGGCGTGCTGCAGAACCAGGCCGGCTGGGATCAGCGTCTGCCAGGCTAc                                                       <  1:293487/147‑1 (MQ=255)                                                                                                       tCCAACAGGGCCTGAGTGTGCCACAAGCGCAAGGCCCGGCCGTTTTGGCAGGCTATAGTGAAAGC‑AGTGAGCAACCGACAGGGCCAA‑TGGCCAATTGCGTGCTGCAGAACCAGGCCGGCTGGGATAAGCGACTTCCAGCCTACCTgcgc                                                 >  7:232675/1‑149 (MQ=255)                                                                                                          aaCAGGGCCTGAGTGTGCCACAAGCGCAAGGCCCGGCCGTTTTGGCAGGCTATAGTGAAAGC‑AGTGAGCAACCGACCGGGCCAA‑TGGCCAATGGCGTGCTGCAGAACCAGGCCGGCTGGGATCAGCGTCTGc                                                               >  2:92368/1‑132 (MQ=255)                                                                                                          aaCAGGGCCTGAGTGTGCCACAAGCGCAAGGCCCGGCCGTTTTGGCAGGCTATAGTGAAAGC‑AGTGAGCAACCGACCGGGCCAA‑TGGCCAATGGCGTGCTGCAGAACCAGGCCGGCTGGGATCAGCGTCTGc                                                               <  1:92368/132‑1 (MQ=255)                                                                                                          aaCAGGGCCTGAGTGTGCCACAAGCGCAAGGCCCGGCCGTTTTGGCAGGCTATAGTGAAAGC‑AGTGAGCAACCGACCGGGCCAA‑TGGCCAATGGCGTGCTGCAGAACCAGGCCGGCTGGGATCAGCGTCTGCCAGGCTACCTGCGCCAg                                              >  2:239325/1‑149 (MQ=255)                                                                                                                gCCTGAGTGTGCCACAAGCGCAAGGCCCGGCCGTTTTGGGAGGCTATAGTGAAAGC‑AGTGAGCAACCGACCGGGCCAA‑TGGCCAATGGCGTGCTGCAGAACCAGGCCGGCTGGGATCAGCGTCTGCCAGGCTACCTGCGCCAGCATGcc                                        <  2:46238/149‑1 (MQ=255)                                                                                                                  cTGAGTGTGCCACAAGCGCAAGGCCCGGCCGTTTTGGCAGGCTATAGTGAAAGC‑AGTGAGCAACCGACCGGGCCAA‑TGGCCAATGGCGTGCTGCAGAACCAGGCCGGCTGGGATCAGCGTCTGCCAGGCTACCTGCGCCAGCATGCCCa                                      <  5:62917/149‑1 (MQ=255)                                                                                                                     aGTGTGCCACAAGCGCAAGGCCCGGCCGTTTTGGCAGGCTATAGTGAAAGC‑AGTGAGCAACCGACCGGGCCAA‑TGGCCAATGGCGTGCTGCAGAACCAGGCCGGCTGGGATCAGCGTCTGCCAGGCTACCTGCGCCAGCATGCCCAg                                     <  8:11221/147‑1 (MQ=255)                                                                                                                      gtgtGCCACAAGCGCAAGGCCCGGCCGTGTTGGCAGGCTATAGTGAAAGC‑AGTGAGCAACCGACCGGGCCAA‑TGGCCAATGGCGTGCTGCAGACCCAGGCCGGCTGGGATCAGCGTCTGCCAGGCTACCTGCGCCAGCATGCCCAGGaa                                  <  4:253906/149‑1 (MQ=255)                                                                                                                           ccACAAGCGCAAGGCCCGGCCGTTTTGGCAGGCTATAGTGAAAGC‑AGTGAGCAACCGACCGGGCCAA‑TGGCCAATGGCGTGCTGCAGAACCAGGCCGGCTGGGATCAGCGTCTGCCAGGCTACCTGCGCCAGCATGCCCAGGAATCTgc                             >  5:285147/1‑149 (MQ=255)                                                                                                                             acaAGCGCAAGGCCCGGCCGTTTTGGCAGGCTATAGTGAAAGC‑AGTGAGCAACCGACCGGGCCAA‑TGGCCAATGGCGTGCTGCAGAACCAGGCCGGCTGGGATCAGCGTCTGCCAGGCTACCTGCGCCAGCATGCCCAGGAATCTgcgc                           >  2:122479/1‑149 (MQ=255)                                                                                                                             acaAGCGCAAGGCCCGGCCGTTTTGGCAGGCTATAGTGAAAGC‑AGTGAGCAACCGACCGGGCCAA‑TGGCCAATGGCGTGCGGCAGAACCAGGCCGGCTGGGATCAGCGTCTGCCAGGCTACCTGCGCCAGCATGCCCAGGAATCTgcgc                           <  5:79990/149‑1 (MQ=255)                                                                                                                               aaGCGCAAGGCCCGGCCGTTTTGGCAGGCTATAGTGAAAGC‑AGTGAGCAACCGACCGGGCCAA‑TGGCCAATGGCGTGCTGCAGAACCAGGCCGGCTGGGATCAGCGTCTGCCAGGCTACCTGCGCCAGCATGCCCAGGAATCTGCGCt                          >  1:153861/1‑148 (MQ=255)                                                                                                                                  cgcAAGGCCCGGCCGTTTTGGCAGGCTATAGTGAAAGC‑AGTGAGCAACCGACCGGGCCAA‑TGGCCAATGGCGTGCTGCAGAACCAGGCCGGCTGGGATCAGCGTCTGCCAGGCTACCTGCGCCAGCATGCCCAGGAATCTGCGCTCAAg                      >  6:151572/1‑149 (MQ=255)                                                                                                                                   gcAAGGCCCGGCCGTTTTGGCAGGCTATAGTGAAAGC‑AGTGAGCAACCGACCGGGCCAA‑TGGCCAATGGCGTGCTGCAGAACCAGGCCGGCTGGGATCAGCGTCTGCCAGGCTACCTGCGCCAGCATGCCCAGGAATCTGCGCTCAAgg                     <  5:270706/149‑1 (MQ=255)                                                                                                                                    cAAGGCCCGGCCGTTTTGGTAGGCTATAGTGAAAGC‑AGTGAGCACCCGACCGGGCCAA‑TGGCCAATGGCGTGCTGCAGAACCAGGCCGGCTGGGATCAGCGTCTGCCAGGCTACCTGCGCCAGCATGCCCAGGAATCTGCGCTCAAggg                    >  1:59877/1‑149 (MQ=255)                                                                                                                                       ggCCCGGCCGTTTTGGCAGGCTATAGTGAAAGCTAGTGAGCAACCGACCGGGCCAA‑TGGCCAATGGCGTGCTGCAGAACCAGGCCGGCTGGGATCAGCGTCTGCCAGGCTAc                                                       >  1:237292/1‑112 (MQ=255)                                                                                                                                       ggCCCGGCCGTTTTGGCAGGCTATAGTGAAAGC‑AGTGAGCAACCGACCGGGCCAA‑TGGCCAATGGCGTGCTGCAGAACCAGGCCGGCTGGGATCAGCGTCTGCCAGGCTAc                                                       <  2:237292/111‑1 (MQ=255)                                                                                                                                        gCCCGGCCGTTTTGGCAGGCTATAGTGAAAGC‑AGTGAGCAACCGACCGGGCCAA‑TGGCCAATGGCGTGCTGCAGAACCAGGCCGGCTGGGATCAGCGTCTGCCAGGCTACCTGCGCCAGCATGCCCAGGAATCTGCGCTCAAGGGCACt                >  7:179014/1‑149 (MQ=255)                                                                                                                                             gCCGTTTTGGcaggctgctgggcagcaagctctgcacccgtgatttcgtcctggttgtacatacgcacaccggccagtaccgcgacggtaaccgaggcggctaccgccagacggccaatgctgcgccaagggcctttcttgaccttggc             >  3:227343‑M2/1‑10 (MQ=255)                                                                                                                                                 ttttGGCAGGCTATAGTGAAAGC‑AGTGAGCAACCGACCGGGCCAA‑TGGCCAATGGCGTGCTGCAGAACCAGGCCGGCTGGGATCAGCGTCTGCCAGGCTACCTGCGCCAGCATGCCCAGGAATCTGCGCTCAAGGGCACTGAAACCGCa       <  8:289222/149‑1 (MQ=255)                                                                                                                                                 ttttGGCAGGCTATAGTGAAAGC‑AGTGAGCAACCGAACGGGCCAA‑TGGCCAATGGCGTGCTGCAGAACCAGGCCGGCTGGGATCAGCGTCTGCCACGCTACCTGCGCCAGCATGCACAGGAATCTGCGCTCAAGGGCACTGAAACCGCa       >  1:368655/1‑149 (MQ=255)                                                                                                                                                      gCAGGCTATAGTGAAAGG‑AGTGAGCAACCGACCGGGCCAA‑TGGCCAATGGCGTGCTGCAGAACCAGGCCGGCTGGGATCAGCGTCTGCCAGGCTACCTGCGCCAGCATGCCCAGGAATCTGCGCTCAAGGGCACTGAAACCGCATTGcc  <  8:142275/149‑1 (MQ=255)                                                                                                                                                      gCAGGCTATAGTGAAAGC‑AGTGAGCAACCGACCGGGCCAA‑TGGCCAATGGCGTGCTGCAGAACCAGGCCGGCTGGGATCAGCGTCTGCCAGGCTACCTGCGCCAGCATGCCCAGGAATCTGCGCTCAAGGGCACTGAAACCGCATTGcc  <  5:151572/149‑1 (MQ=255)                                                                                                                                                      |                                                                                                                                                       TCTGGCGGTAGCCGCCTCGGTTACCGTCGCGGTACTGGCCGGTGTGCGTATGTACAACCAGGACGAAATCACGGGTGCAGAGCTTGCTGCCCAGCAGC‑CTGTCCAACAGGGCCTGAGTGTGCCACAAGCGCAAGGCCCGGCCGTTTTGGCAGGCTATAGTGAAAGC‑AGTGAGCAACCGACCGGGCCAA‑TGGCCAATGGCGTGCTGCAGAACCAGGCCGGCTGGGATCAGCGTCTGCCAGGCTACCTGCGCCAGCATGCCCAGGAATCTGCGCTCAAGGGCACTGAAACCGCATTGCC  >  NC_002947/1628148‑1628444

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.