New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4135852	56 (0.930)	4 (0.070)	3/246	NT	6.7%	coding (61/921 nt)	PP_3640	AraC family transcriptional regulator
	?	NC_002947	= 4135878	59 (1.050)					coding (87/921 nt)	PP_3640	AraC family transcriptional regulator

TATAAGAACTACCCTCCATATTCGTCAGTCGCCTTTCCTTGCTCCTGAGTCTTTGCATTAGATGATTTCGTCCAGCCCGCTTGTCGATTGGTTATTAGAAAGCCTGGAGCTCGATGCCAGCCTGTTTCATGTAGGCCGCTATTGCGGCGGCTGGCATGCCAGTACCCAAGGCATGGGCCGGGCCAGCTTTCATCTGGTGGTGCAAGGCCATTGCTGGCTGCACATTGACGGCCAGCCGCAGGCCATTTGCCTGGAGAAAGGTGATGCCGTGTTCCTGCTGCGTGACCTG  >  NC_002947/4135731‑4136019                                                                                                                                                    |                                                                                                                                              tataAGAACTACCCTCCATATTCGTCAGTCGCCTTTCCTTGCTCCTGAGTCTTTGCATTAGATGATTTCGTCCAGCCCGCTTGTCGATTGGTTATTAGAAAGCCTGGAGCTCGATGCCAGCCTGTTTCATGTAGGCCGCTATTGCGGCg                                                                                                                                              <  1:129216‑M2/149‑2 (MQ=255)     aGAACTACCCTCCATATTCGTCAGTCGCCTTTCCTTGCTCCTGAGTCTTTGCATTCGATGATTTCGTCCAGCCCGCTTGTCGATTGGTTATTAGAAAGCCTGGAGCTCGATGCCAGCCTGTTTCATGTAGGCCGCTATTGCGGCggctg                                                                                                                                          >  8:178876‑M2/1‑144 (MQ=255)        aCTACCCTCCATATTCGTCAGTCGCCTTTCCTTGCTCCTGAGTCTTTGCATTAGATGATTTCGTCCAGCCCGCTTGTCGATTGGTTATTAGAAAGCCTGGAGCTCGATGCCAGCCTGTTTCATGTAGGCCGCTATTGCGGCggctggca                                                                                                                                       >  4:182788‑M2/1‑141 (MQ=255)           aCCCTCCATATTCGTCAGTCGCCTTTCCTTGCTCCTGAGTCTTTGCATTAGATGATTTCGTCCAGCCCGCTTGTCGATTGGTTATTAGAAAGCCTGGAGCTCGATGCCAGCCTGTTTCATGTAGGCCGCTATTGCGGCGGCTGGCATGc                                                                                                                                    >  1:213600/1‑149 (MQ=255)            cccTCCATAATCCTCAGTCGCCTTTCCTTGCTCCTGACTCTTTGCATTAGATGATTTCGTCCAGCCCGCTTGTCGATTGGTTATTAGAAAGCCTGGAGCTCGATGCCAGCCTGTTTCATGTAGGCCGCTATTGCGGCGGCTGGCATGc                                                                                                                                    <  2:375141/148‑1 (MQ=255)             ccTCCATATTCGTCAGTCGCCTTTCCTTGCTCCTGAGTCTTTGCATTAGATGATTTCGTCCAGCCCGCTTGTCGATTGGTTATTAGAAAGCCTGGAGCTCGATGCCAGCCTGTTTCATGTAGGCCGCTATTGCGGCGGCTGGCATGCCa                                                                                                                                  <  2:122795/149‑1 (MQ=255)                    atTCGTCAGTCGCCTTTCCTTGCTCCTGAGTCTTTGCATTAGATGATTTCGTCCAGCCCGCTTGTCGATTGGTTATTAGAAAGCCTGGAGCTCGATGCCAGCCTGTTTCATGTAGGCCGCTATTGCGGCGGCTGGCATGCCAGTAccc                                                                                                                            >  3:348006/1‑148 (MQ=255)                    atTCGTCAGTCGCCTTTCCTTGCTCCTGAGTCTTTGCATTAGATGATTTCGTCCAGCCCGCTTGTCGATTGGTTATTAGAAAGCCTGGAGCTCGATGCCAGCCTGTTTCATGTAGCCCGCTATTGCGGCGGCTGGCATGCCAGTAccc                                                                                                                            >  4:45511/1‑148 (MQ=255)                        gTCAGTCGCCTTTCCTTGCTCCTGAGTCTTTGCATTAGATGATTTCGTCCAGCCCGCTTGTCGATTGGTTATTAGAAAGCCTGGAGCTCGATGCCAGCCTGTTTCATGTAGGCCGCTATTGCGGCGGCTGGCATGCCAGTACCCAAgg                                                                                                                        >  7:52088/1‑148 (MQ=255)                                       ttGCTCCTGAGTCTTTGCATTAGATGATTTCGTCCAGCCCGCTTGTCGATTGGTTATTAGAAAGCCTGGAGCTCGATGCCAGCCTGTTTCATGTAGGCCGCTATTGCGGCGGCTGGCATGCCAGTACCCAAGGCATGGGCCGGGCCAGc                                                                                                        >  3:120353/1‑149 (MQ=255)                                         gCTCCTGAGTCTTTGCATTAGATGATTTCGTCCAGCCCGCTTGTCGATTGGTTATTAGAAAGCCTGGAGCTCGATGCCAGCCTGTTTCATGTAGGCCGCTATTGCGGCGGCTGGCATGCCAGTACCCAAGGCACGGGCCGGGCCAGCt                                                                                                       <  7:319468/148‑1 (MQ=255)                                               gAGTCTTTGCATTAGATGATTTCGTCCAGCCCGCTTGTCGATTGGTTATTAGAAAGCCTGGAGCTCGATGCCAGCCTGTTTCATGTAGGCCGCTATTGCGGCGGCTGGCATGCCAGTACCCAAGGCATGGGCCGGGCCAGCTTTCATCt                                                                                                >  5:505/1‑149 (MQ=255)                                                  tCTTTGCATTAGATGATTTCGTCCAGCCCGCTTGTCGATTGGTTATTAGAAAGCCTGGAGCTCGATGCCAGCCTGTTTCATGTAGGCCGCTATTGCGGCGGCTGGCATGCCAGTACCCAAGGCATGGGCCGGGCCAGCTTTCATCtggt                                                                                             <  1:335006/149‑1 (MQ=255)                                                     ttGCATTAGATGATTTCGTCCAGCCCGCTTGTCGATTGGTTATTAGAAAGCCTGGAGCTCGATGCCAGCCTGTTTCATGTAGGCCGCTATTGCGGCGGCTGGCATGCCAGTACCCAAGGCATGGGCCGGGCCAGCTTTCATCTggtggt                                                                                          >  5:168021/1‑149 (MQ=255)                                                      tGCATTAGATGATTTCGTCCAGCCCGCTTGTCGATTGGTTATTAGAAAGCCTGGAGCTCGATGCCAGCCTGTTTCATGTAGGCCGCTATTGCGGCGGCTGGCATGCCAGTACCCAAGGCATGGGCCGGGCCAGCTTTCATCTggtggt                                                                                          <  7:64465/148‑1 (MQ=255)                                                         aTTAGATGATTTCGTCCAGCCCGCTTGTCGATTGGTTATTAGAAAGCCTGGAGCTCGATGCCAGCCTGTTTCATGTAGGCCGCTATTGCGGCGGCTGGCATGCCAGTACCCAAGGCATGGGCCGGGCCAGCTTTCATCTGGTGGTGc                                                                                        >  1:363721/1‑147 (MQ=255)                                                         aTTAGATGATTTCGTCCAGCCCGCTTGTCGATTGGTTATTAGAAAGCCTGGAGCTCGATGCCAGCCTGTTTCATGTAGGCCGCTATTGCGGCGGCTGGCATGCCAGTACCCAAGGCATGGGCCGGGCCAGCTTTCATCTGGTGGTGc                                                                                        >  5:121955/1‑147 (MQ=255)                                                          ttAGATGATTTCGTCCAGCCCGCTTGTCGATTGGTTATTAGAAAGCCTGGAGCTCGATGCCAGCCTGTTTCATGTAGGCCGCTATTGCGGCGGCTGGCATGCCAGTACCCAAGGCATGGGCCGGGCCAGCTTTCATCTGGTGGTGCAAg                                                                                     >  4:13253/1‑149 (MQ=255)                                                          ttAGATGATTTCGTCCAGCCCGCTTGTCGATTGGTTATTAGAAAGCCTGGAGCTCGATGCCAGCCTGTTTCATGTAGGCCGCTATTGCGGATGCTGGAATGCCAGTACCCAAGGCATGCGCCGGGCCAGCTTTCATCTGGTGGTGAAAg                                                                                     >  7:77176/1‑149 (MQ=255)                                                           tAGATGATTTCGTCCAGCCCGCTTGTCGATTGGTTATTAGAAAGCCTGGAGCTCGATGCCAGCCTGTTTCATGTAGGCCGCTATTGCGGCGGCTGGCATGCCAGTACCCAAGGCATGGGCCGGGCCAGCTTTCATCTGGTGGTGCAAgg                                                                                    >  4:299813/1‑149 (MQ=255)                                                                gatTTCGTCCAGCCCGCTTGTCGATTGGTTATTAGAAAGCCTGGAGCTCGATGCCAGGCTGTTTCATGTAGGCCGCTATTGCGGCGGCTGGCATGCCAGTACCCAAGGCATGGGCCGGGCCAGCTTTCATCTGGTGGTGCAAGGCCAtt                                                                               >  7:64141/1‑149 (MQ=255)                                                                 atTTCGTCCAGGCCGCTTGTCGATTGGTTATTAGAAAGCCTGGAGCTCGATGCCAGCCTGTTTCATGTAGCCCGCTATTGCGGCGGCTGGCATGCCAGTACCCAAGGCATGGGCCGGGCCAGCTTTCATCTGGTGGTGCAAGGCCATTg                                                                              <  3:45511/149‑1 (MQ=255)                                                                 atTTCGTCCAGCCCGCTTGTCGATTGGTTATTAGAAAGCCTGGAGCTCGATGCCAGCCTGTTTCATGTAGGCCGCTATTGCGGCGGCTGGCATGCCAGTACCCAAGGCATGGGCCGGGCCAGCTTTCATCTGGTGGTGCAAGGCCAtt                                                                               <  8:28699/148‑1 (MQ=255)                                                                  tttCGTCCAGCCCGCTTGTCGATTGGTTATTAGAAAGCCTGGAGCTCGATGCCAGCCTGTTTCATGTAGGCCGCTATTGCGGCGGCTGGCATGCCAGTACCCAAGGCATGGGCCGGGCCAGCTTTCATCTGGTGGTGCAAGGCCAtt                                                                               <  5:70647/147‑1 (MQ=255)                                                                  tttCGTCCAGCCCGCTTGTCGATTGGTTATTAGAAAGCCTGGAGCTCGATGCCAGCCTGTTTCATGTAGGCCGCTATTGCGGCGGCTGGCATGCCAGTACCCAAGGCATGGGCCGGGCCAGCTTTCATCTGGTGGTGCAAGGCCAtt                                                                               >  6:70647/1‑147 (MQ=255)                                                                      gTCCAGCCCGCTTGTCGATTGGTTATTAGAAAGCCTGGAGCTCGATGCCAGCCTGTTTCATGTAGGCCGCTATTGCGGCGGCTGGCATGCCAGTACCCAAGGCATGGGCCGGGCCAGCTTTCATCTGGTGGTGCAAGGCCATTgctggc                                                                         >  2:49049/1‑149 (MQ=255)                                                                      gTCCAGCCCGCTTGTCGATTGGTTATTAGAAAGCCTGGAGCTCGATGCCAGCCTGTTTCATGTAGGCCGCTATTGCGGCGGCTGGCATGCCAGTACCCAAGGCATGGGCCGGGCCAGCTTTCATCTGGTGGTGCAAGGCCATTgctgg                                                                          <  4:120353/148‑1 (MQ=255)                                                                       tCCAGCCCGCTTGTCGATTGGTTATTAGAAAGCCTGGAGCTCGATGCCAGCCTGTTTCATGTAGGCCGCTATTGCGGCGGCTGGCATGCCAGTACCCAAGGCATGGGCCGGGCCAGCTTTCATCTGGTGGTGCAAGGCCATTgctggct                                                                        >  6:211508/1‑149 (MQ=255)                                                                          aGCCCGCTTGTCGATTGGTTATTAGAAAGCCTGGAGCTCGATGCCAGCCTGTTTCATGTAGGCCGCTATTGCGGCGGCTGGCATGCCAGTACCCAAGGCATGGGCCGGGCCAGCTTTCATCTGGTGGTGCAAGGCCATTGCTGGCTGca                                                                     >  8:27529/1‑149 (MQ=255)                                                                           gCCCGCTTGTCGATTGGTTATTAGAAAGCCTGGAGCTCGATGCCAGCCTGTTTCATGTAGGCCGCTATTGCGGCGGCTGGCATGCCAGTACCCAAGGCATGGGCCGGGCCAGCTTTCATCTGGTGGTGCAAGGCCATTGCTGGCTGca                                                                     >  3:43011/1‑148 (MQ=255)                                                                            cccGCTTGTCGATTGGTTATTAGAAAGCCTGGAGCTCGATGCCAGCCTGTTTCATGTAGGCCGCTATTGCGGCGGCTGGCATGCCAGTACCCAAGGCATGGGCCGGGCCAGCTTTCATCTGGTGGTGCAAGGCCATTGCTGGCTGcaca                                                                   <  7:27529/149‑1 (MQ=255)                                                                                   gTCGATTGGTTATTAGAAAGCCTGGAGCTCGATGCCAGCCTGTTTCATGTAGGCCGCTATTGCGGCGGCTGGCATGCCAGTACCCAAGGCATGGGCCGGGCCAGCTTTCATCTGGTGGTGCAAGGCCATTGCTGGCTGCACATTGACg                                                             <  5:59368/148‑1 (MQ=255)                                                                                       aTTGGTTATTAGAAAGCCTGGAGCTCGATGCCAGCCTGTTTCATGTAGGCCGCTATTGCGGCGGCTGGCATGCCAGTACCCAAGGCATGGGCCGGGCCAGCTTTCATCTGGTGGTGCAAGGCCATTGCTGGCTGCACAt                                                                  >  5:243287/1‑139 (MQ=255)                                                                                       aTTGGTTATTAGAAAGCCTGGAGCTCGATGCCAGCCTGTTTCATGTAGGCCGCTATTGCGGCGGCTGGCATGCCAGTACCCAAGGCATGGGCCGGGCCAGCTTTCATCTGGTGGTGCAAGGCCATTGCTGGCTGCACAt                                                                  <  6:243287/139‑1 (MQ=255)                                                                                              attaGAAAGCCTGGAGCTCGATGCCAGCCTGTTTCATGTAGGCCGCTATTGCGGCGGCTGGCATGCCAGTACCCAAGGCATGGGCCGGGCCAGCTTTCATCTGGTGGTGCAAGGCCATTGCTGGCTGCACATTGACGGCCAGCCGCAgg                                                 >  6:283080/1‑149 (MQ=255)                                                                                                  gAAAGCCTGGAGCTCGATGCCAGCCTGTTTCATGTAGGCCGCTATTGCGGCGGCTGGCATGCCAGTACCCAAGGCATGGGCCGGGCCAGCTTTCATCTGGTGGTGCAAGGCCATTGCTGGCTGCACATTGACGGCCAGCCGCAg                                                  >  1:170880/1‑144 (MQ=255)                                                                                                  gAAAGCCTGGAGCTCGATGCCAGCCTGTTTCATGTAGGCCGCTATTGCGGCGGCTGGCATGCCAGTACCCAAGGCATGGGCCGGGCCAGCTTTCATCTGGTGGTGCAAGGCCATTGCTGGCTGCACATTGACGGCCAGCCGCAg                                                  <  2:170880/144‑1 (MQ=255)                                                                                                  gAAAGCCTGGAGCTCGATGCCAGCCTGTTTCATGTAGGCCGCTATTGCGGCGGCTGGCATGCCAGTACCCAAGGCATGGGCCGGGCCAGCTTTCATCTGGTGGTGCAAGGCCATTGCTGGCTGCACATTGACGGCCAGCCGCAGGCCAt                                             >  5:65998/1‑149 (MQ=255)                                                                                                  gAAAGCCTGGAGCTCGATGCCAGCCTGTTTCATGTAGGCCGCTATTGCGGCGGCTGGCATGCCAGTACCCAAGGCATGGGCCGGGCCAGCTTTCATCTGGTGGTGCAAGGCCATTGCTGGCTGCACATTGACGGCCAGCCGCAGGCCAt                                             >  6:19640/1‑149 (MQ=255)                                                                                                    aaGCCTGGAGCTCGATGCCAGCCTGTTTCATGTAGGCCGCTATTGCGGCGGCTGGCATGCCAGTACCCAAGGCATGGGCCGGGCAAGCTTTCATCTGGTGGTGCAAGGCCATTGCTGGCTGCACATTGACGGCCAGCCGCAGGCCAttt                                           >  3:219805/1‑149 (MQ=255)                                                                                                      gCCTGGAGCTCGATGCGAGCCTGTTTCATGTAGGCCGCTATTGCGGCGGCTGGCATGCCAGTACCCAAGGCATGGGCCGGGCCAGCTTTCATCTGGTGGTGCAAGGCCATTGCTGGCTGCACATTGACGGCCAGCCGCAGGCCATTTGc                                         <  2:363721/149‑1 (MQ=255)                                                                                                        cTGGAGCTCGATGCCAGCCTGTTTCATGTAGGCCGCTATTGCGGCGGCTGGCATGCCAGTACCCAAGGCATGGGCCGGGCCAGCTTTCATCTGGTGGTGCAAGGCCATTGCTGGCTGCACATTGACGGCCAGCCGCAGGCCATTTGCCt                                       <  3:299813/149‑1 (MQ=255)                                                                                                           gAGCTCGATGCCAGCCTGTTTCATGTAGGCCGCTATTGCGGCGGCTGGCATGCCAGTACCCAAGGCATGGGCCGGGCCAGCTTTCATCTGGTGGTGCAAGGCCATTGCTGGCTGCACATTGACGGCCAGCCGCAGGCCATTTGCCTgg                                     <  5:339050/148‑1 (MQ=255)                                                                                                           gAGCTCGATGCCAGCCTGTTTCATGTAGGCCGCTATTGCGGCGGCTGGCATGCCAGTACCCAAGGCATGGGCCGGGCCAGCTTTCATCTGGTGGTGCAAGGCCATTGCTGGCTGCACATTGACGGCCAGCCGCAGGCCATTTGCCTGga                                    <  1:49049/149‑1 (MQ=255)                                                                                                           gAGCTCGATGCCAGCCTGTTTCATGTAGGCCGCTATTGCGGCGGCTGGCATGCCAGTACCCAAGGCATGGGCCGGGCCAGCTTTCATCTGGTGGTGCAAGGCCATTGCTGGCTGCACATTGACGGCCAGCCGCAGGCCATTTGCCTGga                                    <  5:283080/149‑1 (MQ=255)                                                                                                           gAGCTCGATGCCAGCCTGTTTCATGTAGGCCGCTATTGCGGCGGCTGGCATGCCAGTACCCAAGGCATGGGCCGGGCCAGCTTTCATCTGGTGGTGCAAGGCCATTGCTGGCTGCACATTGACGGCCAGCCGCAGGCCATTTGCCTGga                                    <  6:140472/149‑1 (MQ=255)                                                                                                           gAGCTCGAAGCCAGCCTGTTTCATGTAGGCCGCTATTGCGGCGGCTGGCATGCCAGTACCCAAGGCATGGGCCGGGCCAGCTTTCATCTGGTGGTGCGAGGCCATTGCTGGCTGCACATTGACGGCCAGCCGCAGGCCATTTGCCTg                                      <  3:33029/147‑1 (MQ=255)                                                                                                            aGCTCGATGCCAGCCTGTTTCATGTAGGCCGCTATTGCGGCGGCTGGCATGCCAGTACCCAAGGCATGGGCCGGGCCAGCTTTCATCTGGTGGTGCAAGGCCATTGCTGGCTGCACATTGACGGCCAGCCGCAGGCCATTTGCCTGga                                    <  6:121955/148‑1 (MQ=255)                                                                                                               tCGATGCCAGCCTGTTTCATGTAGGCCGCTATTGCGGCGGCTGGCATGCCAGTACCCAAGGCATGGGCCGGGCCAGCTTTCATCTGGTGGTGCAAGGCCATTGCTGGCTGCACATTGACGGCCAGCCGCAGGCCATTTGCCTg                                      <  1:38045/143‑1 (MQ=255)                                                                                                               tCGATGCCAGCCTGTTTCATGTAGGCCGCTATTGCGGCGGCTGGCATGCCAGTACCCAAGGCATGGGCCGGGCCAGCTTTCATCTGGTGGTGCAAGGCCATTGCTGGCTGCACATTGACGGCCAGCCGCAGGCCATTTGCCTg                                      >  2:38045/1‑143 (MQ=255)                                                                                                                 gATGCCAGCCTGTTTCATGTAGGCCGCTATTGCGGCGGCTGGCATGCCAGTACCCAAGGCATGGGCCGGGCCAGCTTTCATCTGGTGGTGCAAGGCCATTGCTGGCTGCACATTGACGGCCAGCCGCAGGCCATTTGCCTGGAGAAAgg                              >  2:125574/1‑149 (MQ=255)                                                                                                                   tGCCAGCCTGTTTCATGTAGGCCGCTATTGCGGCggctggcatcgagctccaggctttctaataaccaatcgacaagcgggctggacgaaatcatctaatgcaaagactcaggagcaaggaaaggcgactgacgaatatggagggtagt                            <  1:291995‑M2/149‑116 (MQ=255)                                                                                                                   tGCCAGCCTGTTTCATGTAGGCCGCTATTGCGGCggctggcatcgagctccaggctttctaataaccaatcgacaagcgggctggacgaaatcatctaatgcaaagactcaggagcaaggaaaggcgactgacgaatatggagggtagt                            <  5:303069‑M2/149‑116 (MQ=255)                                                                                                                   tGCCAGCCTGTTTCATGTAGGCCGCTATTGCGGCGGCTGGCATGCCAGTACCCAAGGCATGGGCCGGGCCAGCTTTCATCTGGTGGTGCAAGGCCATTGCTGGCTGCACATTGACGGCCAGCCGCAGGCCATTTGCCTGGAGAAAGGt                             <  6:505/148‑1 (MQ=255)                                                                                                                    atctgCCTGTTTCATGTAGGCCGCTATTGCGGCGGCTGGCATGCCAGTACCCAAGGCATGGGCCGGGCCAGCTTTCATCTGGTGGTGCAAGGCCATTGCTGGCTGCACATTGACGGCCAGCCGCAGGCCATTTGCCTGGAGAAAGGt                             <  5:279140/143‑1 (MQ=255)                                                                                                                     ccAGCCTGTTTCATGTAGGCCGCTATTGCGGCggctggcatcgagctccaggctttctaataaccaatcgacaagcgggctggacgaaatcatctaatgcaaagactcaggagcaaggaaaggcgactgacgaatatggagggtagttc                          >  3:311588‑M2/1‑32 (MQ=255)                                                                                                                     ccAGCCTGTTTCATGTAGGCCGCTATTGCGGCggctggcatcgagctccaggctttctaataaccaatcgacaagcgggctggacgaaatcatctaatgcaaagactcaggagcaaggaaaggcgactgacgaaaatggagggtagttc                          <  4:311588‑M2/149‑118 (MQ=255)                                                                                                                     ccAGCCTGTTTCATGTAGGCCGCTATTGCGGCGGCTGGCATGCCAGTACCCAAGGCATGGGCCGGGCCAGCTTTCATCTGGTGGTGCAAGGCCATTGCTGGCTGCACATTGACGGCCAGCCGCAGGCCATTTGCCTGGAGAAAGGTGa                           <  5:19640/148‑1 (MQ=255)                                                                                                                       aGCCTGTTTCATGTAGGCCGCTATTGCGGCGGCTGGCATGCCAGTACCCAAGGCATGGGCCGGGCCAGCTTTCATCTGGTGGTGCAAGGCCATTGCTGGCTGCACATTGACGGCCAGCCGCAGGCCATTTGCCTGGAGAAAGGTGATGc                        >  5:248770/1‑149 (MQ=255)                                                                                                                         ccTGTTTCATGTAGGCCGCTATTGCGGCGGCTGGCATGCCAGTACCCAAGGCATGGGCCGGGCCAGCTTTCATCTGGTGGTGCAAGGCCATTGCTGGCTGCACATTGACGGCCAGCCGCAGGCCATTTGCCTGGAGAAAGGt                             >  6:279140/1‑142 (MQ=255)                                                                                                                           tGTTTCATGTAGGCCGCTATTGCGGCGGCTGGCATGCCAGTACCCAAGGCATGGGCCGGGCCAGCTTTCATCTGGTGGTGCAAGGCCATTGCTGGCTGCACATTGACGGCCAGCCGCAGGCCATTTGCCTGGAGAAAGGTGATGCCgtg                    >  1:289303/1‑149 (MQ=255)                                                                                                                             tttCATGTAGGCCGCTATTGCGGCGGCTGGCATGCCAGTACCCAAGGCATGGGCCGGGCCAGCTTTCATCTGGTGGTGCAAGGCCATTGCTGGCTGCACATTGACGGCCAGCCGCAGGCCATTTGCCTGGAGAAAGGTGATGCCGTGtt                  >  7:339410/1‑149 (MQ=255)                                                                                                                                  cagccgCCGCAATAGCGGCGGCTGGCATGCCAGTACCCAAGGCATGGGCCGGGCCAGCTTTCATCTGGTGGTGCAAGGCCATTGCTGGCTGCACATTGACGGCCAGCCGCAGGCCATTTGCCTGGAGAAAGGTGATGCCGTGTTCctgc             >  4:214005/6‑149 (MQ=255)                                                                                                                                  cagccgCCGCAATAGCGGCGGCTGGCATGCCAGTACCCAAGGCATGGGCCGGGCCAGCTTTCATCTGGTGGTGCAAGGCCATTGCTGGCTGCACATTGACGGCCAGCCGCAGGCCATTTGCCTGGAGAAAGGTGATGCCGTGTTCctgc             >  7:338934/6‑149 (MQ=255)                                                                                                                                    tAGGCCGCTATTGCGGCGGCTGGCATGCCAGTACCCAAGGCATGGGCCGGGCCAGCTTTCATCTGGTGGTGCAAGGCCATTGCTGGCTGCACATTGACGGCCAGCCGCAGGCCATTTGCCTGGAGAAAGGTGATGCCGTGTTCctgct            <  2:213600/148‑1 (MQ=255)                                                                                                                                    tAGGCCGCTATTGCGGCGGCTGGCATGCCAGTACCCAAGGCATGGGCCGGGCCAGCTTTCATCTGGTGGTGCAAGGCCATAGCTGGCTGCACATTGACGGCCAGCCGCAGGCCATTTGCCTGGAGAAAGGTGATGCCGTGTTCctgctg           >  3:187840/1‑149 (MQ=255)                                                                                                                                      ggCCGCTATTGCGGCGGCTGGCATGCCAGTACCCAAGGCATGGGCCGGGCCAGCTTTCATCTGGTGGTGCAAGGCCATTGCTGGCTGCACATTGACGGCCAGCCGCAGGCCATTTGCCTGGAGAAAGGTGATGCCGTGTTCCtgctgc          <  8:77176/148‑1 (MQ=255)                                                                                                                                       gCCGCTATTGCGGCGGCTGGCATGCCAGTACCCAAGGCATGGGCCGGGCCAGCTTTCATCTGGTGGTGCAAGGCCATTGCTGGCTGCACATTGACGGCCAGCCGCAGGCCATTTGCCTGGAGAAAGGTGATGCCGTGTTCCTGCTGCGt        <  4:348006/149‑1 (MQ=255)                                                                                                                                              ttGCGGCGGCTGGCATGCCAGTACCCAAGGCATGGGCCGGGCCAGCTTTCATCTGGTGGTGCAAGGCCATTGCTGGCTGCACATTGACGGCCAGCCGCAGGCCATTTGCCTGGAGAAAGGTGATGCCGTGTTCCTGCTGCGTGACCTg  <  6:31175/148‑1 (MQ=255)                                                                                                                                                    |                                                                                                                                              TATAAGAACTACCCTCCATATTCGTCAGTCGCCTTTCCTTGCTCCTGAGTCTTTGCATTAGATGATTTCGTCCAGCCCGCTTGTCGATTGGTTATTAGAAAGCCTGGAGCTCGATGCCAGCCTGTTTCATGTAGGCCGCTATTGCGGCGGCTGGCATGCCAGTACCCAAGGCATGGGCCGGGCCAGCTTTCATCTGGTGGTGCAAGGCCATTGCTGGCTGCACATTGACGGCCAGCCGCAGGCCATTTGCCTGGAGAAAGGTGATGCCGTGTTCCTGCTGCGTGACCTG  >  NC_002947/4135731‑4136019

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.