New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5358776 =	71 (1.180)	4 (0.070)	4/252	NT	5.8%	intergenic (‑16/+12)	infB/nusA	translation initiation factor IF‑2/transcription termination/antitermination factor L
	?	NC_002947	5358816 =	63 (1.100)					coding (1454/1482 nt)	nusA	transcription termination/antitermination factor L

GTGCGGCAGACCTGCCTCACGCATCTGCTGCAGCAGGCGCTCTACCGGTGCCTCGACCTCTTGGGCCAGTTCTTTCACCGTGACTTGCGTCATGCACTTCTCTCCTCAGGCCGCGCCTAATTACTCGAACCAGTGGGCTCGGGCGGCCATGATCAACTTGCCGGCACGCTCTTCGTCGATGCCGTCGATGTCGAGCAGATCGTCGATCGACTGCTCGGCCAGGTCTTCGCGGTTAACCACGCCGCGCACCGCCAGTTCAGCCGCCAGGTCTTTGTCCATGCCCTCAAGGGAGAGCAG  >  NC_002947/5358668‑5358964                                                                                                                                                     |                                                                                                                                                     gtgCGGCAGACCTGCCTCACGCATCTGCTGCAGCAGGCGCTCTACCGGTGCCTCGACCTCTTGGGCCAGTTCTTTCACCGTGACTTGCGTCATGCACTTCTCTCCTCAGGCCGCGCCTAATTACTCGAACCAGTGGGCTCGGGCGGCCa                                                                                                                                                      >  7:36845/1‑149 (MQ=255) actggcggtgcgcggcgtggttaaccgcgaagacctggccgagcagtcgatcgacgatctgctcgacatcgacggcatcgacgaagagcgtgccggcaagttgatcatGGCCGCGCCTAATTACTCGAACCAGTGGGCTCGGGCGGCCa                                                                                                                                                      >  2:68994‑M1/109‑149 (MQ=255)  tgCGGCAGACCTGCCTCACGCATCTGCTGCAGCAGGCGCTCTACCGGTGCCTCGACCTCTTGGGCCAGTTCTTTCACCGTGACTTGCGTCATGCACTTCTCTCCTCAGGCCGCGCCTAATTACTCGAACCAGTGGGCTCGGGCGGCCAt                                                                                                                                                     >  5:29274/1‑149 (MQ=255)  tgCGGCAGACCTGCCTCACGCATCTGCTGCAGCAGGCGCTCTACCGGTGCCTCGACCTCTTGGGCCAGTTCTTTCACCGTGACTTGCGTCATGCACTTCTCTCCTCAGGCCGCGCCTAATTACTCGAACCAGTGGGCTCGGGCGGCCAt                                                                                                                                                     <  3:184800/149‑1 (MQ=255)  ctggcggtgcgcggcgtggttaaccgcgaagacctggccgagcagtcgatcgacgatctgctcgacatcgacggcatcgacgaagagcgtgccggcaagttgatcatGGCCGCGCCTAATTACTCGAACCAGTGGGCTCGGGCGGCCAt                                                                                                                                                     >  1:190131‑M1/108‑149 (MQ=255)     gcggtgcgctgcttggttaacggcgaagacctggccgagcagtcgatcgacgatctgctcgacatcgacggcatcgacgaagagcgtgccggcaagttgatcatGGCCGCGCCTAATTACTCGAACCAGTGGGCTCGGGCGGCCATGAt                                                                                                                                                  >  8:279568‑M1/105‑149 (MQ=255)         gACCTGCCTCACGCATCTGCTGCAGCAGGCGCTCTACCGGTGCCTCGACCTCTTGGGCCAGTTCTTTCACCGTGACTTGCGTCATGCACTTCTCTCCTCAGGCCGCGCCTAATTACTCGAACCAGTGGGCTCGGGCGGCCATGATCAAc                                                                                                                                              <  6:85652/149‑1 (MQ=255)               ccTCACGCATCTGCTGCAGCAGGCGCTCTACCGGTGCCTCGACCTCTTGGGCCAGTTCTTTCACCGTGACTTGCGTCATGCACTTCTCTCCTCAGGCCGCGCCTAATTACTCGAACCAGTGGGCTCGGGCGGCCATGa                                                                                                                                                   <  5:298568/138‑1 (MQ=255)               ccTCACGCATCTGCTGCAGCAGGCGCTCTACCGGTGCCTCGACCTCTTGGGCCAGTTCTTTCACCGTGACTTGCGTCATGCACTTCTCTCCTCAGGCCGCGCCTAATTACTCGAACCAGTGGGCTCGGGCGGCCATGa                                                                                                                                                   >  6:298568/1‑138 (MQ=255)               ccTCACGCATCTGCTGCAGCAGGCGCTCTACCGGTGCCTCGACCTCTTGGGCCAGTTCTTTCACCGTGACTTGCGTCATGCACTTCTCTCCTCAGGCCGCGCCTAATTACTCGAACCAGTGGGCTCGGGCGGCCATGATCAACTTGCCg                                                                                                                                        <  5:61426/149‑1 (MQ=255)                   aCGCATCTGCTGCAGCAGGCGCTCTACCGGTGCCTCGACCTCTTGGGCCAGTTCTTTCACCGTGACTTGCGTCATGCACTTCTCTCCTCAGGCCGCGCCTAATTACTCGAACCAGTGGGCTCGGGCGGCCATGATCAACTTGCCGGCAc                                                                                                                                    >  5:192976/1‑149 (MQ=255)                     gCATCTGCTGCAGCAGGCGCTCTACCGGTGCCTCGACCTCTTGGGCCAGTTCTTTCACCGTGACTTGCGTCATGCACTTCTCTCCTCAGGCCGCGCCTAATTACTCGAACCAGTGGGCTCGGGCGGCCATGATCAACTTGCCGGCACGc                                                                                                                                  >  6:144001/1‑149 (MQ=255)                       aTCTGCTGCAGCAGGCGCTCTACCGGTGCCTCGACCTCTTGGGCCAGTTCTTTCACCGTGACTTGCGTCATGCACTTCTATCCTCAGGCCGCGCCTAATTACTCGAACCAGTGGGCTCGGGCGGCCATGATCAACTTGCCGGCACGctc                                                                                                                                >  5:354009/1‑149 (MQ=255)                            ctgcAGCAGGCGCTCTACCGGTGCCTCGACCTCTTGGGCCAGTTCTTTCACCGTGACTTGCGTCATGCACTTCTCTCCTCAGGCCGCGCCTAATTACTCGAACCAGTGGGCTCGGGCGGCCATGATCAACTTGCCGGCACGCTCTtc                                                                                                                             <  1:208621/147‑1 (MQ=255)                                           tACCGGTGCCTCGACCTCTTGGGCCAGTTCTTTCACCGTGACTTGCGTCATGCACTTCTCTCCTCAGGCCGCGCCTAATTACTCGAACCAGTGGGCTCGGGCGGCCATGATCAACTTGCCGGCACGCTCTTCGTCGATGCCGTCGATGt                                                                                                            >  5:255277/1‑149 (MQ=255)                                                    cTCGACCTCTTGGGCCAGTTCTTTCACCGTGACTTGCGTCATGCACTTCTCTCCTCAGGCCGCGCCTAATTACTCGAACCAGTGGGCTCGGGCGGCCATGATCAACTTGCCGGCACGCTCTTCGTCGATGCCGTCGATGTCGAGCAgtc                                                                                                   >  8:240620/1‑147 (MQ=255)                                                      cGACCTCTTGGGCCAGTTCTTTCACCGTGACTTGCGTCATGCACTTCTCTCCTCAGGCCGCGCCTAATTACTCGAACCAGTGGGCTCGGGCGGCCATGATCAACTTGCCGGCACGCTCTTCGTCGATGCCGTCGATGTCGAGCAGAtcg                                                                                                 <  6:192976/149‑1 (MQ=255)                                                       gACCTCTTGGGCCAGTTCTTTCACCGTGACTTGCGTCATGCACTTCTCTCCTCAGGCCGCGCCTAATTACTCGAACCAGTGGGCTCGGGCGGCCATGATCAACTTGCCGGCACGCTCTTCGTCGATGCCGTCGATGTCGAGCAGAtcgt                                                                                                <  2:269382/149‑1 (MQ=255)                                                        aCCTCTTGGGCCAGTTCTTTCACCGTGACTTGCGTCATGCACTTCTCTCCTCAGGCCGCGCCTAATTACTCGAACCAGTGGGCTCGGGCGGCCATGATCAACTTGCCGGCACGCTCTTCGTCGATGCCGTCGATGTCGAGCAGAtcgtc                                                                                               >  3:192792/1‑149 (MQ=255)                                                          ctctTGGGCCAGTTCTTTCACCGTGACTTGCGTCATGCACTTCTCTCCTCAGGCCGCGCCTAATTACTCGAACCAGTGGGCTCGGGCGGCCATGATCAACTTGCCGGCACGCTCTTCGTCGATGCCGTCGATGTCGAGCAGATCGtcga                                                                                             >  6:111346/1‑149 (MQ=255)                                                           tctTGGGCCAGTTCTTTCACCGTGACTTGCGTCATGCACTTCTCTCCTCAGGCCGCGCCTAATTACTCGAACCAGTGGGCTCGGGCGGCCATGATCAACTTGCCGGCACGCTCTTCGTCGATGCCGTCGATGTCGAGCAGATCGtcgat                                                                                            >  4:319187/1‑149 (MQ=255)                                                            ctTGGGCCAGTTCTTTCACCGTGACTTGCGTCATGCACTTCTCTCCTCAGGCCGCGCCTAATTACTCGAACCAGTGGGCTCGGGCGGCCATGATCAACTTGCCGGCACGCTCTTCGTCGATGCCGTCGATGTCGAGCAGATCGtcgatc                                                                                           <  7:163312/149‑1 (MQ=255)                                                                ggCCAGTTCTTTCACCGTGACTTGCGTCATGCACTTCTCTCCTCAGGCCGCGCCTAATTACTCGAACCAGTGGGCTCGGGCGGCCATGATCAACTTGCCGGCACGCTCTTCGTCGATGCCGTCGATGTCGAGCAGATCGTCGATCGACt                                                                                       >  3:336141/1‑149 (MQ=255)                                                                  ccAGTTCTTTCACCGTGACTTGCGTCACGCACTTCTCTCCTCAGGCCGCGCCTAATTACTCGAACCAGTGGGCTCGGGCGGCCATGATCAACTTGCCGGCACGCTCTTCGTCGATGCCGTCGATGTCGAGCAGATCGTCGATCGACTg                                                                                      >  8:314170/1‑148 (MQ=255)                                                                   cAGTTCTTTCACCGTGACTTGCGTCATGCACTTCTCTCCTCAGGCCGCGCCTAATTACTCGAACCAGTGGGCTCGGGCGGCCATGATCAACTTGCCGGCACGCTCTTCGTCGATGCCGTCGATGTCGAGCAGATCGTCGATCGACTGCt                                                                                    <  8:36845/149‑1 (MQ=255)                                                                      ttCTTTCACCGTGACTTGCGTCATGCACTTCTCTCCTCAGGCCGCGCCTAATTACTCGAACCAGTGGGCTCGGGCGGCCATGATCAACTTGCCGGCACGCTCTTCGTCGATGCCGTCGATGTCGAGCAGATCGTCGATCGACTGCTCgg                                                                                 >  2:353137/1‑149 (MQ=255)                                                                         tttCACCGTGACTTGCGTCATGCACTTCTCTCCTCAGGCCGCGCCTAATTACTCGAACCAGTGGGCTCGGGCGGCCATGATCAACTTGCCGGCACGCTCTTCGTCGATGCCGTCGATGTCGAGCAGATCGTCGATCGACTGCTCg                                                                                  <  1:19976/145‑1 (MQ=255)                                                                         tttCACCGTGACTTGCGTCATGCACTTCTCTCCTCAGGCCGCGCCTAATTACTCGAACCAGTGGGCTCGGGCGGCCATGATCAACTTGCCGGCACGCTCTTCGTCGATGCCGTCGATGTCGAGCAGATCGTCGATCGACTGCTCg                                                                                  >  2:19976/1‑145 (MQ=255)                                                                           tCACCGTGACTTGCGTCATGCACTTCTCTCCTCAGGCCGCGCCTAATTACTCGAACCAGTGGGCTCGGGCGGCCATGATCAACTTGCCGGCACGCTCTTCGTCGATGCCGTCGATGTCGAGCAGATCGTCGATCGACTGCTCGGCCa                                                                              <  5:261343/147‑1 (MQ=255)                                                                             agcGTGACTTGCGTCATGCTCTTCTCTCCTCAGGCCGCGCCTAATTACTCGACCCAGTGGGCTCGGGCGGCCATGATCAACTTGCCGGCACGCTCTTCGTCGATGCCGTCGATGTCGAGCAGATCGGCGATCGACTGCTCGGCCAGGt                                                                           <  5:377249/146‑1 (MQ=255)                                                                             aCCGTGACTTGCGTCATGCACTTCTCTCCTCAGGCCGCGCCTAATTACTCGAACCAGTGGGCTCGGGCGGCCATGATCAACTTTCCGGCACGCTCTTCGTCGATGCCGTCGATGTCGAGCAGATCGTCGATCGACTGCTCGGCCAGGTc                                                                          >  4:317329/1‑149 (MQ=255)                                                                             aCCGTGACTTGCGTCATGCACTTCTCTCCTCAGGCCGCGCCTAATTACTCGAACCAGTGGGCTCGGGCGGCCATGATCAACTTGCCGGCACGCTCTTCTTCGATGCCGTCGATGTCGAGCAGATCGTCGATCGACTGCTCGGCCAGGt                                                                           <  5:372134/148‑1 (MQ=255)                                                                             aCCGTGACTTGCGTCATGCACTTCTCTCCTCAGGCCGCGCCTAATTACTCGAACCAGTGGGCTCGGGCGGCCATGATCAACTTGCCGGCACGCTCTTCGTCGATGCCGTCGATGTCGAGCAGATCGTCGATCGACTGCTCGGCCAGGt                                                                           <  5:72663/148‑1 (MQ=255)                                                                             aCCGTGACTTGCGTCATGCACTTCTCTCCTCAGGCCGCGCCTAATTACTCGAACCAGTGGGCTCGGGCGGCCATGATCAACTTGCCGGCACGCTCTTCGTCGATGCCGTCGATGTCGAGCAGATCGTCGATCGACTGCTCGGCCAGGTc                                                                          >  2:169259/1‑149 (MQ=255)                                                                               cGTGACTTGCGTCATGCACTTCTCTCCTCAGGCCGCGCCTAATTACTCGAACCAGTGGGCTCGGGCGGCCATGATCAACTTGCCGGCACGCTCTTCGTCGATGCCGTCGATGTCGAGCAGATCGTCGATCGACTGCTCGGCCAGGTCtt                                                                        >  7:67401/1‑149 (MQ=255)                                                                                   aCTTGCGTCATGCACTTCTCTCCTCAGGCCGCGCCTAATTACTCGAACCAGTGGGCTCGGGCGGCCATGATCAACTTGCCGGCACGCTCTTCGTCGATGCCGTCGATGTCGAGCAGATCGTCGATCGACTGCTCGGCCAGGTCTTcgcg                                                                    >  2:20615/1‑149 (MQ=255)                                                                                    cTTGCGTCATGCACTTCTCTCCTCAGGCCGCGCCTAATTACTCGAACCAGTGGGCTCGGGCGGCCATGATCAACTTGCCGGCACGCTCTTCGTCGATGCCGTCGATGTCGAGCAGATCGTCGATCGACTGCTCGGCCAGGTCTTCGCgg                                                                   <  4:192792/149‑1 (MQ=255)                                                                                     ttGCGTCATGCACTTCTCTCCTCAGGCCGCGCCTAATTACTCGAACCAGTGGGCTCGGGCGGCCATGATCAACTTGCCGGCACGCTCTTCGTCGATGCCGTCGATGTCGAGCAGATCGTCGATCGACTGCTCGGCCAGGTCTTcgcg                                                                    <  7:158789/147‑1 (MQ=255)                                                                                     ttGCGTCATGCACTTCTCTCCTCAGGCCGCGCCTAATTACTCGAACCAGTGGGCTCGGGCGGCCATGATCAACTTGCCGGCACGCTCTTCGTCGATGCCGTCGATGTCGAGCAGATCGTCGATCGACTGCTCGGCCAGGTCTTcgcg                                                                    >  8:158789/1‑147 (MQ=255)                                                                                     ttGCGTCATGCACTTCTCTCCTCAGGCAGCGCCTAATTACTCGAACCAGTGGGCTCGGGCGGCCATGATCAACTTGCCGGCACGCTCTTCGTCGATGCCGTCGATGTCGAGCAGATCGTCGATCGACTGCTCGGCCAGGTCTTCGCGGt                                                                  >  8:154358/1‑149 (MQ=255)                                                                                       gCGTCATGCACTTCTCTCCTCAGGCCGCGCCTAATTACTCGAACCAGTGGGCTCGGGCGGCCATGATCAACTTGCCGGCACGCTCTTCGTCGATGCCGTCGATGTCGAGCAGATCGTCGATCGACTGCTCGGCCAGGTCTTCGCGGt                                                                  <  5:111346/147‑1 (MQ=255)                                                                                       gCGTCACGCACTTCTCTCCTCAGGCCGCGCCTAATTACTCGAACCAGTGGGCTCGGGCGGCCATGATCAACTTGCCGGCACGCTCTTCGTCGATGCCGTCGATGTCGAGCAGATCGTCGATCGACTGCTCGGCCAGGTCTTCGCGGtt                                                                 <  7:314170/148‑1 (MQ=255)                                                                                        cGTCATGCACTTCTCTCCTCAGGCCGCGCCTAATTACTCGAACCAGTGGGCTCGGGCGGCCATGATCAACTTGCCGGCACGCTCTTCGTCGATGCCGTCGATGTCGAGCAGATCGTCGATCGACTGCTCGGCCa                                                                              <  6:349852/134‑1 (MQ=255)                                                                                        cGTCATGCACTTCTCTCCTCAGGCCGCGCCTAATTACTCGAACCAGTGGGCTCGGGCGGCCATGATCAACTTGCCGGCACGCTCTTCGTCGATGCCGTCGATGTCGAGCAGATCGTCGATCGACTGCTCGGCCAGGTCTTCGCGGTTa                                                                <  1:353137/148‑1 (MQ=255)                                                                                            aTGCACTTCTCTCCTCAGGCCGCGCCTAATTACTCGAACCAGTGGGCTCGGGGGGCATTGATCAACTTGCCGGCACGCTCTTCTTCTATGCCGATGATGTCGAGCAGATCGTCGATCGACTGCTCGGCCAGGTCTTCGCGGTTAACCAc                                                           <  1:103996/149‑1 (MQ=255)                                                                                            aTGCACTTCTCTCCTCAGGCCGCGCCTAATTACTCGAACCAGTGGGATAGGGCGGCCATGATCAACTTGCCGGCAAGCTCTTCGTCGATGCCGTCGATGTCGAGCAGATCGTCGATCGACTGCTCGGCCAGGTCTTCGCGGTTAACCAc                                                           >  5:158954/1‑149 (MQ=255)                                                                                               cACTTCTCTCCTCAGGCCGCGCCTAATTACTCGAACCAGTGGGCTCGGGCGGCCATGATCAACTTGCCGGCACGCTCTTCGTCGATGCCGTCGATGTCGAGCAGATCGTCGATCGACTGCTCGGCCAGGTCTTCGCGGTTAACCAcgcc                                                        <  1:12473/149‑1 (MQ=255)                                                                                                aCTTCTCTCCTCAGGCCGCGCCTAATTACTCGAACCAGTGGGCTCGGGCGGCCATGATCAACTTGCCGGCACGCTCTTCGTCGATGCCGTCGATGTCGAGCAGATCGTCGATCGACTGCTCGGCCAGGTCTTCGCGGTTAACCAcgccg                                                       >  3:335935/1‑149 (MQ=255)                                                                                                 cTTCTCTCCTCAGGCCGCGCCTAATTACTCGAACCAGTGGGCTCGGGCGGCCATGATCAACTTGCCGGCACGCTCTTCGTCGATGCCGTCGATGTCGAGCAGATCGTCGATCGACTGCTCGGCCAg                                                                             >  5:234491/1‑126 (MQ=255)                                                                                                 cTTCTCTCCTCAGGCCGCGCCTAATTACTCGAACCAGTGGGCTCGGGCGGCCATGATCAACTTGCCGGCACGCTCTTCGTCGATGCCGTCGATGTCGAGCAGATCGTCGATCGACTGCTCGGCCAg                                                                             <  6:234491/126‑1 (MQ=255)                                                                                                  ttCTCTCCTCAGGCCGCGCCTAATTACTCGAACCAGTGGGCTCGGGCGGCCATGATCAACTTGCCGGCACGCTCTTCGTCGATGCCGTCGATGTCGAGCAGATCGTCGATCGACTGCTCGGCCAGGTCTTCGCGGTTAACCACGCcgcg                                                     >  2:270775/1‑149 (MQ=255)                                                                                                      ctcctcAGGCCGCGCCTAATTACTCGAACCAGTGGGCTCGGGCGGCCATGATCAACTTGCCGGCGCGCTCTTCGTCGATGCCGTCGATGTCGAGCAGATCGTCGATCGACTGCTCGGCCAGGTCTTCGCGGTTCACCACGCCGCGCAcc                                                 >  6:325901/1‑149 (MQ=255)                                                                                                       tcctcAGGCCGCGCCTAATTACTCGAACCAGTGGGCTCGGGCGGCCATGATCAACTTGCCGGCACGCTCTTCGTCGATGCCGTCGATGTCGAGCAGATCGTCGATCGACTGCTCGGCCAGGTCTTCGCGGTTAAc                                                              >  4:229671/1‑135 (MQ=255)                                                                                                       tcctcAGGCCGCGCCTAATTACTCGAACCAGTGGGCTCGGGCGGCCATGATCAACTTGCCGGCACGCTCTTCGTCGATGCCGTCGATGTCGAGCAGATCGTCGATCGACTGCTCGGCCAGGTCTTCGCGGTTAAc                                                              <  3:229671/135‑1 (MQ=255)                                                                                                       tcctcAGGCCGCGCCTAATTACTCGAACCAGTGGGCTCGGGCGGCCATGATCAACTTGCCGGCACGCTCTTCGTCGATGCCGTCGATGTCGAGCAGATCGTCGATCGACTGCTCGGCCAGGTCTTCGCGGTTAACCACGCCGCGCACCg                                                >  2:226477/1‑149 (MQ=255)                                                                                                        atcatggccgcccgagcccactggttcgagtaattaggcgcggccATGATCAACTTGCCGGCACGCTCTTCGTCGATGCCGTCGATGTCGAGCAGATCGTCGATCGACTGCTCGGCCAGGTCTTCGCCGTTAACCAAGCAGCGCACCGc                                               >  8:279568‑M2/46‑149 (MQ=255)                                                                                                           atggccgcccgagcccactggttcgagtaattaggcgcggccATGATCAACTTGCCGGCACGCTCTTCGTCGATGCCGTCGATGTCGAGCAGATCGTCGATCGACTGCTCGGCCAGGTCTTCGCGGTTAACCACGCCGCGCACCGCCAg                                            >  1:190131‑M2/43‑149 (MQ=255)                                                                                                            tggccgcccgagcccactggttcgagtaattaggcgcggccATGATCAACTTGCCGGCACGCTCTTCGTCGATGCCGTCGATGTCGAGCAGATCGTCGATCGACTGCTCGGCCAGGTCTTCGCGGTTAACCACGCCGCGCACCGCCAGt                                           >  2:68994‑M2/42‑149 (MQ=255)                                                                                                                CGCGCCTAATTACTCGAACCAGTGGGCTCGGGCGGCCATGATCAACTTGCCGGCACGCTCTTCGTCGATGCCGTCGATGTCGAGCAGATCGTCGATCGACTGCTCGGCCAGGTCTTCGCGGTTAACCACGCCGCGCACCGCCAGTTCAg                                       <  6:183388‑M1/149‑1 (MQ=255)                                                                                                                   gcCTAATTACTCGAACCAGTGGGCTCGGGCGGCCATGATCAACTTGCCGGCGCGCTCTTCGTCGATGCCGTCGATGTCGAGCAGATCGTCGATCGACTGCTCGGCCAGGTCTTCGCGGTTCACCACGCCGCGCACCGCCAGTTCAgccg                                    <  5:325901/149‑1 (MQ=255)                                                                                                                     cTAATTACTCGAACCAGTGGGCTCGGGCGGCCATGATCAACTTGCCGGCACGCTCTTCGTCGATGCCGTCGATGTCGAGCAGATCGTCGATCGACTGCTCGGCCAGGTCTTCGCGGTTAACCACGCCGCGCACCGCCAGTTCAgccgc                                   >  4:224827/1‑148 (MQ=255)                                                                                                                            cTCGAACCAGTGGGCTCGGGCGGCCATGATCCACTTGCCGGCACGCTCTTCGTCGATGCCGTCGATGTCGAGCAGATCGTCGATCGACTGCTCGGCCAGGTCTTCGCGGTTAACCACGCCGCGCACCGCCAGTTCAGCCGCCAGGTCt                            <  6:15125/148‑1 (MQ=255)                                                                                                                            cTCGAACCAGTGGGCTCGGGCGGCCATGATCAACTTGCCGGCACGCTCTTCGTCGATGCCGTCGATGTCGAGCAGATCGTCGATCGACTGCTCGGCCAGGTCTTCGCGGTTAACCACGCCGCGCACCGCCAGTTCAGCCGCCAGGTCtt                           >  6:3565/1‑149 (MQ=255)                                                                                                                             tCGAACCAGTGGGCTCGGGCGGCCATGATCAACTTGCCGGCACGCTCTTCGTCGATGCCGTCGATGTCGAGCAGATCGTCGATCGACTGCTCGGCCAGGTCTTCGCGGTTAACCACGCCGCGCACCGCCAGTTCa                                        <  3:284239/135‑1 (MQ=255)                                                                                                                             tCGAACCAGTGGGCTCGGGCGGCCATGATCAACTTGCCGGCACGCTCTTCGTCGATGCCGTCGATGTCGAGCAGATCGTCGATCGACTGCTCGGCCAGGTCTTCGCGGTTAACCACGCCGCGCACCGCCAGTTCa                                        >  4:284239/1‑135 (MQ=255)                                                                                                                             tCGAACCAGTGGGCTCGGGCGGCCATGATCAACTTGCCGGCACGCTCTTCGTCGATGCCGTCGATGTCGAGCAGATCGTCGATCGACTGCTCGGCCAGGTCTTCGCGGTTAACCACGCCGCGCACCGCCAGTTCAGCCGCCAGGTCttt                          >  3:172514/1‑149 (MQ=255)                                                                                                                               gAACCAGTGGGCTCGGGCGGCCATGATCAACTTGCCGGCACGCTCTTCGTCGATGCCGTCGATGTCGAGCAGATCGTCGATCGACTGCTCGGCCAGGTCTTCGCGGTTAACCACGCCGCGCACCGCCAGTTCAGCCGCCAGGTCTTTGt                        >  2:20681/1‑149 (MQ=255)                                                                                                                                 aCCAGTGGGCTCGGGCGGCCATGATCAACTTGCCGGCACGCTCTTCGTCGATGCCGTCGATGTCGAGCAGATCGTCGATCGACTGCTCGGCCAGGTCTTCGCGGTTAACCACGCTGCGCACCGCCAGTTCAGCCGCCAGGTCTTTGTc                       >  4:77894/1‑148 (MQ=255)                                                                                                                                 aCCAGTGGGCTCGGGCGGCCATGATCAACTTGCCGGCACGCTCTTCGTCGATGCCGTCGATGTCGAGCAGATCGTCGATCGACTGCTCGGCCAGGTCTTCGCGGTTAACCACGCCGCGCACCGCCAGTTCAGCCGCCAGGTCTTTGTc                       >  1:83284/1‑148 (MQ=255)                                                                                                                                     gtaattaggcgcggccATGATCAACTTGCCGGCACGCTCTTCGTCGATGCCGTCGATGTCGAGCAGATCGTCGATCGACTGCTCGGCCAGGTCTTCGCGGTTAACCACGCCGCGCACCGCCAGTTCAGCCGCCAGGTCTTTGTCCATGc                  <  7:279568‑M2/133‑1 (MQ=255)                                                                                                                                     gTGGGCTCGGGCGGCCATGATCAACTTGCCGGCACGCTCTGCGTCGATGCCGTCGATGTCGAGCAGAGCGTCGATCGACTGCTCGGCCAGGTCTTCGCGGTTAACCCCGCCGCGCACCGCCAGTTCAGCCGCCAGGTCTTTGTCCATGc                  <  6:354009/149‑1 (MQ=255)                                                                                                                                      tGGGCTCGGGCGGCCATGATCAACTTGCC‑GCACGCTCTTCGTCGATGCCGTCGATGTCGAGCAGATCGTCGATCGACTGCTCGGCCAGGTCTTCGCGGTTAACCACGCCGCGCACCGCCAGTTCAGCCGCCAGGTCTTTGTCCATGccc                <  6:29274/149‑1 (MQ=255)                                                                                                                                       gggCTCGGGCGGCCATGATCAACTTGCCGGCACGCTCTTCGTCGATGCCGTCGATGTCGAGCAGATCGTCGATCGACTGCTCGGCCAGGTCTTCGCGGTTAACCACGCCGCGCACCGCCAGTTCAGCCGCCAGGTCTTTGt                        <  5:272665/141‑1 (MQ=255)                                                                                                                                       gggCTCGGGCGGCCATGATCAACTTGCCGGCACGCTCTTCGTCGATGCCGTCGATGTCGAGCAGATCGTCGATCGACTGCTCGGCCAGGTCTTCGCGGTTAACCACGCCGCGCACCGCCAGTTCAGCCGCCAGGTCTTTGt                        >  6:272665/1‑141 (MQ=255)                                                                                                                                         gCTCGGGCGGCCATGATCAACTTGCCGGCACGCTCTTCGTCGATGCCGTCGATGTCGa                                                                                                         >  7:239824/1‑58 (MQ=255)                                                                                                                                         gCTCGGGCGGCCATGATCAACTTGCCGGCACGCTCTTCGTCGATGCCGTCGATGTCGa                                                                                                         <  8:239824/58‑1 (MQ=255)                                                                                                                                           tCGGGCGGCCATGATCAACTTGCCGGCACGCTCTTCGCCGATGCCGTCGATGTCGAGCAGATCGTCGATCGACTGCTCGGCCAGGTCTTCGCGGTTAACCACGCCGCGCACCGCCAGTTCAGCCGCCAGGTCTTTGTCCATGCCCTc              >  8:138876/1‑147 (MQ=255)                                                                                                                                             gggCGGCCATGATCAACTTGCCGGCACGCTCTTCGTCGATGCCGTCGATGTCGAGCAGATCGTCGATCGACTGCTCGGCCAGGTCTTCGCGGTTAACCACGCCGCGCACCGCCAGTTCAGCCGCCAGGTCTTTGTCCATGCCCTCAAgg          <  5:183388/149‑1 (MQ=255)                                                                                                                                             gggCGGCCATGATCAACTTGCCGGCACGCTCTTCGTCGATGCCGTCGATGTCGAGCAGATCGTCGATCGACTGCTCGGCCAGGTCTTCGCGGTTAACCACGCCGCGCACCGCCAGTTCAGCCGCCAGGTCTTTGTCCATGCCCTCAAgg          <  1:20615/149‑1 (MQ=255)                                                                                                                                             gggCGGCCATGATCAACTTGCCGGCACGCTCTTCGTCGATGCCGTCGATGTCGAGCAGATCGTCGATCGACTGCTCGGCCAGGTCTTCGCGGTTAACCACGCCGCGCACCGCCAGTTCAGCCGCCAGGTCTTTGTCCATGCCCTCAAg           <  1:169259/148‑1 (MQ=255)                                                                                                                                               gcggccATGATCAACTTGCCGGCACGCTCTTCGTCGATGCCGTCGATGTCGAGCAGATCGTCGATCGACTGCTCGGCCAGGTCTTCGCGGTTAACCACGCCGCGCACCGCCAGTTCAGCCGCCAGGTCTTTGTCCATGCCCTCAAGGga        <  8:67401‑M2/143‑1 (MQ=255)                                                                                                                                                  gccATGATCAACTTGCCGGCACGCTCTTCGTCGATGCCGTCGATGTCGAGCAGATCGTCGATCGACTGCTCGGCCAGGTCTTCGCGGTTAACCACGCCGCGCACCGCCAGTTCAGCCGCCAGGTCTTTGTCCATGCCCTCAAGGGagag     >  6:56446‑M2/4‑149 (MQ=255)                                                                                                                                                    cATGATCAACTTGCCGGCACGCTCTTCGTCGATGCCGTCGATGTCGAGCAGATCGTCGATCGACTGCTCGGCCAGGTCTTCGCGGTTAACCACGCCGCGCACCGCCAGTTCAGCCGCCAGGTCTTTGTCCATGCCCTCAAGGGAGAGCa   <  7:154358‑M2/148‑1 (MQ=255)                                                                                                                                                     aTGATCAACTTGCCGGCACGCTCTTCGTCGATGCCGTCGATGTCGAGCAGATCGTCGATCGACTGCTCGGCCAGGTCTTCGCGGTTAACCACGCCGCGCACCGCCAGTTCAGCCGCCAGGTCTTTGTCCATGCCCTCAAGGGAGAGCAg  <  6:255277/149‑1 (MQ=255)                                                                                                                                                     aTGATCAACTTGCCGGCACGCTCTTCGTCGATGCCGTCGATGTCGAGCAGATCGTCGATCGACTGCTCGGCCAGGTCTTCGCGGTTAACCACGCCGCGCACCGCCAGTTCAGCCGCCAGGTCTTTGTCCATGCCCTCAAGGGAGAGCAg  <  4:335935/149‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                     GTGCGGCAGACCTGCCTCACGCATCTGCTGCAGCAGGCGCTCTACCGGTGCCTCGACCTCTTGGGCCAGTTCTTTCACCGTGACTTGCGTCATGCACTTCTCTCCTCAGGCCGCGCCTAATTACTCGAACCAGTGGGCTCGGGCGGCCATGATCAACTTGCCGGCACGCTCTTCGTCGATGCCGTCGATGTCGAGCAGATCGTCGATCGACTGCTCGGCCAGGTCTTCGCGGTTAACCACGCCGCGCACCGCCAGTTCAGCCGCCAGGTCTTTGTCCATGCCCTCAAGGGAGAGCAG  >  NC_002947/5358668‑5358964

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.