New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5774507	34 (0.560)	3 (0.050)	3/252	NT	7.6%	coding (374/1473 nt)	betB	NAD‑dependent betaine aldehyde dehydrogenase
	?	NC_002947	= 5774533	41 (0.710)					coding (400/1473 nt)	betB	NAD‑dependent betaine aldehyde dehydrogenase

GCCATGCTGGAAACCCTGGACACCGGCAAGTCGTACTCCGAAACCCGCTACGTCGACATCGTTACCGGCGCCGACGTGCTGGAATACTACGCAGGCCTGGTACCGGCCATCGAAGGCGAGCAGATCCCGCTGCGCGAATCGTCCTTCGTCTACACCCGCCGCGAGCCGCTGGGCGTGACCGTGGGTATCGGTGCCTGGAACTACCCGATCCAGATCGCCCTGTGGAAATCTGCCCCGGCCCTGGCCGCTGGCAACGCGATGATCTTCAAACCGTCGGAAGTCACCTCGCT  >  NC_002947/5774392‑5774681                                                                                                                                              |                                                                                                                                                     gCCATGCTGGAAACCCTGGACACCGGCAAGTCGTACTCCGAAACCCGCTACGTCGACATCGTTACCGGCGCCGACGTGCTGGAATACTACGCAGGCCTGGTACCGGCCATCGAAGGCGAGCAGATCCCGCTGCGCGAATCGTCCTTCGt                                                                                                                                               <  8:73429/149‑1 (MQ=255)   cATGCTGGAAACCCTGGACACCGGCAAGTCGTACTCCGAAACCCGCTACGTCGACATCGTTACCGGCGCCGACGTGCTGGAATACTACGCAGGCCTGGTACCGGCCATCGAAGGCGAGCAGATCCCGCTGCGCGAATCGTCCTTCGTc                                                                                                                                              >  5:156452/1‑148 (MQ=255)       cTGGAACCCCTGGACACCGGCAAGTCGGACTCCGAAACCCGCTACGTCGACATCGTTACCGGCGCCGACGTGCTGGAATACTACGCAGGCCTGGTACCGGCCATCGAAGGCGAGCAGATACCGCTGCGCGAATCGTCCTTCTTCTaca                                                                                                                                          <  4:220265/148‑1 (MQ=255)          gAAACCCTGGACACCGGCAAGTCGTACTCCGAAACCCGCTACGTCGACATCGTTACCGGCGCCGACGTGCTGGAATACTACGCAGGCCTGGTACCGGCCATCGAAGGCGAGCAGATCCCGCTGCGCGAATCGTCCTTCGTCTACAccc                                                                                                                                       <  6:112833/148‑1 (MQ=255)          gAAACCCTGGACACCGGCAAGTCGTACTCCGAAACCCGCTACGTCGACATCGTTACCGGCGCCGACGTGCTGGAATACTACGCAGGCCTGGTACCGGCCATCGAAGGCGAGCAGATCCCGCTGCGCGAATCGTCCTTCGTCTACACccg                                                                                                                                      >  4:160297/1‑149 (MQ=255)                     cacCGGCAAGTCGTACTCCGAAACCCGCTACGTCGACATCGTTACCGGCGCCGACGTGCTGGAATACTACGCAGGCCTGGTACCGGCCATCGAAGGCGAGCAGATCCCGCTGCGCGAATCGTCCTTCGTCTACACCCGCCGCGAGCCGc                                                                                                                           >  7:164467/1‑149 (MQ=255)                     cacCGGCAAGTCGTACTCCGAAACCCGCTACGTCGACATCGTTACCGGCGCCGACGTGCTGGAATACTACGCAGGCCTGGTACCGGCCATCGAAGGCGAGCAGATCCCGCTGCGCGAATCGTCCTTCGTCTACACCCGCCGCGAGCCGc                                                                                                                           >  6:271234/1‑149 (MQ=255)                       ccGGCAAGTCGTACTCCGAAACCCCCTACGTCGACCTCGTTACCGGCGCCGACGCGCTGGAATACTACGCAGGCCTGGTACCGGCCATCGAAGGCGAGCAGATCCCGCTGCGCGAATCGTCCTTCGTCTACACCCGCCGCGAGCCGCTg                                                                                                                         <  6:273647/149‑1 (MQ=255)                        cGGCAAGTCGTACTCCGAAACCCGCTACGTCGACATCGTTACCGGCGCCGACGTGCTGGAATACTACGCAGGCCTGGTACCGGCCATCGAAGGCGAGCAGATCCCGCTGCGCGAATCGTc                                                                                                                                                     <  8:67073‑M2/120‑2 (MQ=255)                        cGGCAAGTCGTACTCCGAAACCCGCTACGTCGACATCGTTACCGGCGCCGACGTGCTGGAATACTACGCAGGCCTGGTACCGGCCATCGAAGGCGAGCAGATCCCGCTGCGCGAATCGTCCTTCGTCTACACCCGCCGCGAGCCGCTgg                                                                                                                        >  1:191749/1‑149 (MQ=255)                            aaGTCGTACTCCGAAACCCGCTACGTCGACATCGTTACCGGCGCCGACGTGCTGGAATACTACGCAGGCCTGGTACCGGCCATCGAAGGCGAGCAGATCCCGCTGCGCGAATCGTCCTTCGTCTACACCCGCCGCGAGCCGCTGGGCGt                                                                                                                    <  2:191749/149‑1 (MQ=255)                                  tACTCCGAAACCCGCTACGTCGACATCGTTACCGGCGCCGACGTGCTGGAATACTACGCAGGCCTGGTACCGGCCATCGAAGGCGAGCAGATCCCGCTGCGCGAATCGTCCTTCGTCTACACCCGCCGCGAGCCGCTGGGCGTGACCGt                                                                                                              <  8:163095/149‑1 (MQ=255)                                     tCCGAAACCCGCTACGTCGACATCGTTACCGGCGCCGACGTGCTGGAATACTACGCAGGCCTGGTACCGGCCATCGAAGGCGAGCAGATCCCGCTGCGCGAATCGTCCTTCGTCTACACCCGCCGCGAGCCGCTGGGCGTGACCGTggg                                                                                                           >  4:230577/1‑149 (MQ=255)                                      ccGAAACCCGCTACGTCGACATCGTTACCGGCGCCGACGTGCTGGAATACTACGCAGGCCTGGTACCGGCCATCGAAGGCGAGCAGATCCCGCTGCGCGAATCGTCCTTCGTCTACACCCGCCGCGAGCCGCTGGGCGTGACCGTggg                                                                                                           >  6:72751/1‑148 (MQ=255)                                       cGAAACCCGCTACGTCGACATCGTTACCGGCGCCGCCGTGCTGGAATACTACGCAGGCCTGGTACCGGCCATCGAAGGCGAGCAGATCCCGCTGCGCGAATCGTCCTTCGTCTACACCCGCCGCGAGCCGCTGGGCGTGACCGTGGGTa                                                                                                         >  7:132033/1‑149 (MQ=255)                                          aaCCCGCTACGTCGACATCGTTACCGGCGCCGACGTGCTGGAATACTACGCAGGCCTGGTACCGGCCATCGAAGGCGAGCAGATCCCGCTGCGCGAATCGTCCTTCGTCTACACCCGCCGCGAGCCGCTGGGCGTGACCGTGGGTATCg                                                                                                      <  8:164467/149‑1 (MQ=255)                                           aCCCGCTACGTCGACATCGTTACCGGCGCCGACGTGCTGGAATACTACGCAGGCCTGGTACCGGCCATCGAAGGCGAGCAGATCCCGCTGCGCGAATCGTCCTTCGTCTACACCCGCCGCGAGCCGCTGGGCGTGACCGTGGGTATCgg                                                                                                     >  7:54056/1‑149 (MQ=255)                                           aCCCGCTACGTCGACATCGTTACCGCCGCCGACGTGCTGGAATACTACGCAGGCCTGGTACCGGCCATCGAAGGCGAGCAGATCCCGCTGCGCGAATCGTCCTTCGTCTACACCCGCCGCGAGCCGCTGGGCGTGACCGTGGGTATCgg                                                                                                     <  3:278000/149‑1 (MQ=255)                                             ccGCTACGTCGACATCGTTACCGGCGCCGACGTGCTGGAATACTACGCAGGCCTGGTACCGGCCATCGAAGGCGAGCAGATCCCGCTGCGCGAATCGTCCTTCGTCTACACCCGCCGCGAGCCGCTGGGc                                                                                                                      >  6:284017/1‑130 (MQ=255)                                             ccGCTACGTCGACATCGTTACCGGCGCCGACGTGCTGGAATACTACGCAGGCCTGGTACCGGCCATCGAAGGCGAGCAGATCCCGCTGCGCGAATCGTCCTTCGTCTACACCCGCCGCGAGCCGCTGGGc                                                                                                                      <  5:284017/130‑1 (MQ=255)                                                              ttACCGGCGCCGACGTGCTGGAATACTACGCAGGCCTGGTACCGGCCATCGAAGGCGAGCAGATCCCGCTGCGCGAATCGTCCTTCGTCTACACCCGCCGCGAGCCGCTGGGCGTGACCGTGGGTATCGGTGCCTGGAACTACCCGATc                                                                                  <  4:308565/149‑1 (MQ=255)                                                                    gcgcCGACGTGCTGGAATACTACTCAGGCCTGGTACCGGCCATCGAAGGCGAGCAGATCCCGCTGCGCGAATCGTCCTTCGTCTACACCCGCCGCGAGCCGCTGGGCGTGACCGTgg                                                                                                            <  1:159756/117‑1 (MQ=255)                                                                    gcgcCGACGTGCTGGAATACTACGCAGGCCTGGTACCGGCCATCGAAGGCGAGCAGATCCCGCTGCGCGAATCGTCCTTCGTCTACACCCGCCGCGAGCCGCTGGGCGTGACCGTgg                                                                                                            >  2:159756/1‑117 (MQ=255)                                                                         gACGTGCTTGAATACTACGCAGGCCTGGTACCGGCCATCGAAGGCGAGCAGATCCCGCTGCGCGAATCGTCCTTCGTCTACACCCGCCGCGAGCCGCTGGGCGTGACCGTGGGTATCGGTGCCTGGAACTACCCGATCCAGATCGCCCt                                                                       >  7:348026/1‑149 (MQ=255)                                                                          aCGTGCTGGAATACTACGCAGGCCTGGTACCGGCCATCGAAGGCGAGCAGATCCCGCTGCGCGAATCGTCCTTCGTCTACACCCGCCGCGAGCCGCTGGGCGTGACCGTGGGTATCGGTGCCTGGAACTACCCGATCCAGATCGCCCtg                                                                      <  3:230577/149‑1 (MQ=255)                                                                            gTGCTGGAATACTACGCAGGCCTGGTACCGGCCATCGAAGGCGAGCAGATCCCGCTGCGCGAATCGTCCTTCGTCTACACCCGCCGCGAGCCGCTGGGCGTGACCGTGGGTATCGGTGCCTGGAACTACCCGATCCAGATCGCCCtgtg                                                                    <  3:160297/149‑1 (MQ=255)                                                                                tGGAATACTACGCAGGCCTGGTACCGGCCATCGAAGGCGAGCAGATCCCGCTGCGCGAATCGTCCTTCGTCTACACCCGCCGCGAGCCGCTGGGCGTGACCGTGGGTATCGGTGCCTGGAACTACCCGATCCAGATCGCCCTGTGGaaa                                                                >  5:378266/1‑149 (MQ=255)                                                                                 ggAATACTACGCACGCCTTGTACCGTCCATCGAAGGCGAGCATATCCCGCTGCGCGAATCGTCCTTCGTCTACACCCGCCGCTAGCCGCTGGGCGTGACCGTGGGTATCGGTGCCTGGAACTACCCGATCCAGATCGCCCTGTGGAAAt                                                               <  7:236211/149‑1 (MQ=255)                                                                                  gAATACTACGCAGGCCTGGTACCGGCCATCGAAGGCGAGCAGATCCCGCTGCGCGAATCGTCCTTCGTCTACACCAGCCGCGAGCCGCTGGGCGTGACCGTGGGTATCGGTGCCTGGAACTACCCGATCCAGATCGCCCTGTGGAAATc                                                              >  5:84346/1‑149 (MQ=255)                                                                                       ctacGCAGGCCTGGTACCGGCCATCGAAGGCGAGCAGAGCCCGCTGCGCGAATCGTCCTTCGTCTACACCCGCCGCGAGCCGCTGGGCGTGACCGTGGGTATCGGTGCCTGGAACTACCCGATCCAGATCGCCCTGTGGAAATCTGccc                                                         <  8:132033/149‑1 (MQ=255)                                                                                        tacGCAGGCCTGGTACCGGCCATCGAAGCCGAGCAGATCCCGCTGCGCGAATCGTCCTTCGTCTACACCCGCCGCGAGCCGCTGGGCGTGACCGTGGGTATCGGTGCCTGGAACTACCCGATCCAGATCGCCCTGTGGAAATCTGcccc                                                        >  1:214596/1‑149 (MQ=255)                                                                                                ccTGGTACCGGCCATCGTAGGCGAGCAGATCCCGCTGCGCGAATCGTCCTTCGTCTACACCCGCCGCGAGCCGCTGGGCGTGACCGTGGGTATCGGTGCCTGGAACTACCCGATCCAGATCGCCCTGTGGAAATCTGCCCCGGCCCTgg                                                >  5:182087/1‑149 (MQ=255)                                                                                                        cGGCCATCGAAGGCGAGCAGATCCCGCTGCGCGAATCGTCCTTCGTCTACACCCGCCGCGAGCCGCTGGGCGTGACCGTGGGGATCGGTGCCGGGACCTACCCGATCCAGAGCGCCCTGTGGAAATCTGCCCCGGCCCTGGCCGCggg                                         >  3:195337/1‑148 (MQ=255)                                                                                                         ggCCATCGAAGGCGAGCAGATCCCGCTGCGCGAATCGTccttcgatggccggtaccaggcctgcgtagtattccagcacgtcggcgccggtaacgatgtcgacgtagcgggtttcggagtacgacttgccggtgtccagggtttcca                                         <  2:41539‑M2/147‑110 (MQ=255)                                                                                                         ggCCATCGAAGGCGAGCAGATCCCGCTGCGCGAATCGTccttcgatggccggtaccaggcctgcgtagtattccagcacgtcggcgccggtaacgatgtcgacgtagcgggtttcggagtacgacttgccggtgtccagggtttcca                                         >  1:41539‑M2/1‑38 (MQ=255)                                                                                                              tCGAAGGCGAGCAGATCCCGCTGCGCGAATCGTccttcgatggccggtaccaggcctgcgtagtattccagcacgtcggcgccggtaacgatgtcgacgtagcgggtttcggagtacgacttgccggtgtccagggtttccagcatggc                                  <  3:188003‑M2/149‑117 (MQ=255)                                                                                                                   ggCGAGCAGATCCCGCTGCGCGAATCGTCCTTCGTCTACACCCGCCGCGAGCCGCTGGGCGTGACCGTGGGTATCGGTGCCTGGAACTACCCGATCCAGATCGCCCTGTGGAAATCTGCCCCGGCCCTGGCCGCTGGCAACGCgatgat                             <  4:263868/149‑1 (MQ=255)                                                                                                                    gCGAGCAGATCCCGCTGCGCGAATCGTCCTTCGTCTACACCCGCCGCGAGCCGCTGGGCGTGACCGTGGGTATCGGTGCCTGGAACTACCCGATCCAGATCGCCCTGTGGAAATCTGCCCCGGCCCTGGCCGCTGGCAACGCGATGATc                            <  6:26130/149‑1 (MQ=255)                                                                                                                      gAGCAGATCCCGCTGCGCGAATCGTCCTTCGTCTACACCCGCCGCGAGCCGCTGGGCGTGACCGTGGGTATCGGTGCCTGGAACTACCCGATCCAGATCGCCCTGTGGAAATCTGCCCCGGCCCTGGCCGCTGGCAACGCGATGATCtt                          <  7:54122/149‑1 (MQ=255)                                                                                                                          aGATCCCGCTGCGCGAATCGTCCTTCGTCTACACCCGCCGCGAGCCGCTGGGCGTGACCGTGGGTATCGGTGCCTGGAACTACCCGATCCAGATCGCCCTGTGGAAATCTGCCCCGGCCCTGGCCGCTGGCAACGCGATGATCTTCaaa                      <  5:72751/149‑1 (MQ=255)                                                                                                                            aTCCCGCTGCGCGAATCGTCCTTCGTCTACACCCGCCGCGAGCCGCTGGGCGTGACCGTGGGTATCGGTGCCTGGAACTACCCGATCCAGATCGCCCTGTGGaaa                                                                <  7:267164/105‑1 (MQ=255)                                                                                                                            aTCCCGCTGCGCGAATCGTCCTTCGTCTACACCCGCCGCGAGCCGCTGGGCGTGACCGTGGGTATCGGTGCCTGGAACTACCCGATCCAGATCGCCCTGTGGaaa                                                                >  8:267164/1‑105 (MQ=255)                                                                                                                               ccGCTGCGCGAATCGTCCTTCGTCTACACCCGCCGCGAGCCGCTGGGCGTGACCGTGGGTATCGGTGCCTGGAACTACCCGATCCAGATCGCCCTGTGGAAATCTGCCCCGGCCCTGGCCGCTGGCAACGCGATGATCTTCAAACCGTc                 <  2:214596/149‑1 (MQ=255)                                                                                                                                cGCTGCGCGAATCGTCCTTCGTCTACACCCGCCGCGAGCCGCTGGGCGTGACCGTGGGTATCGGTGCCTGGAACTACCCGATCCAGATCGCCCTGTGGAAATCTGCCCCGGCCCTGGCCGCTGGCAACGCGATGATCTTCAAACCGTCg                >  6:187912/1‑149 (MQ=255)                                                                                                                                 gCTGCGCGCATCGTCCTGCGTCTACACCCGCCGCGAGACGCTGGGCGTGACCGTGGGGATCGGTGCCGGGAACTACCCGATCCAGATCGCCCTGTGGAAATCTGCCCCGGCCCTGGCCGCTGGCAACGCGATGATCTTCAAACCGTCgg               <  4:195337/149‑1 (MQ=255)                                                                                                                                     cgcgAATCGTCCTTCGTCTACACCCGCCGCGAGCCGCTGGGCGTGACCGTGGGTATCGGTGCCTGGAACTACCCGATCCAGATCGCCCTGTGGAAATCTGCCCCGGCCCTGGCCGCTGGCAACGCGATGATCTTCAAACCGTCGGaa             <  6:156452/147‑1 (MQ=255)                                                                                                                                       cgAATCGTCCTTCGTCTACACCCGCCGCGAGCCGCTGGGCGTGACCGTGGGTATCGGTGCCTGGAACTACCCGATCCAGATCGCCCTGTGGAAATCTGCCCCGGCCCTGGCCGCTGGCAACGCGATGATCTTCAAACCGTCGGAAGTCa         <  5:271234/149‑1 (MQ=255)                                                                                                                                              tCCTTCGTCTACACCCGCCGCGAGCCGCTGGGCGTGACCGTGGGTATCGGTGCCTGGAACTACCCGATCCAGATCGCCCTGTGGAAATCTGCCCCGGCCCTGGCCGCTGGCAACGCGATGATCTTCAAACCGTCGGAAGTCACCTCGCt  <  8:348026/149‑1 (MQ=255)                                                                                                                                              |                                                                                                                                                     GCCATGCTGGAAACCCTGGACACCGGCAAGTCGTACTCCGAAACCCGCTACGTCGACATCGTTACCGGCGCCGACGTGCTGGAATACTACGCAGGCCTGGTACCGGCCATCGAAGGCGAGCAGATCCCGCTGCGCGAATCGTCCTTCGTCTACACCCGCCGCGAGCCGCTGGGCGTGACCGTGGGTATCGGTGCCTGGAACTACCCGATCCAGATCGCCCTGTGGAAATCTGCCCCGGCCCTGGCCGCTGGCAACGCGATGATCTTCAAACCGTCGGAAGTCACCTCGCT  >  NC_002947/5774392‑5774681

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.