New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5978356 =	82 (1.360)	5 (0.090)	4/252	NT	6.0%	coding (761/993 nt)	PP_5241	LuxR family transcriptional regulator
	?	NC_002947	5978400 =	78 (1.360)					coding (717/993 nt)	PP_5241	LuxR family transcriptional regulator

CGATCTGCCTGGCGATCTGCTTGTGCGACAAGCCGCCTACCACCAGCGAGAAGACCTGGCGCTCACGCTGAGTCAGGCGCTGGTACTTTTCCTCGACCTGCCGCGCCTGCAGCCACTTGTGGCCTTCGGCCACGGCCCGGGCGCGCACTGTCTGCAACAGGGTCAGCAACTGGTCTTCATCGAACGGCTTGGTCAGAAATTCCACCGCCCCGGCGCGCATGGCCTGGACGGTCATCGGGATGGTGCCGAAACCAGTCATGAACACGATCGGCCAGGGCAGCGCCAGCCGGCA  >  NC_002947/5978255‑5978546                                                                                                                                                  |                                                                                                                                                   gcaccatcccgatgaccgtccaggccatgcgcgccggggcggtggaatttctgaccaagccgttcgatgaagaccagttgctgaccctgttgcagacagtgCGCGCCTGCAGCCACTTGTGGCCTTCGGCCACGGCCCGGGCGCGCACt                                                                                                                                                 >  4:166633‑M1/102‑149 (MQ=255) gcaccatcccgatgaccgtccaggccatgcgcgccggggcggtggaatttctgaccaagccgttcgatgaagaccagttgctgaccctgttgcagacagtgCGCGCCTGCAGCCACTTGTGGCCTTCGGCCACGGCCCGGGCGCGCACt                                                                                                                                                 >  5:21762‑M1/102‑149 (MQ=255)   accatcccgatgaccgtccaggccatgcgcgccggggcggtggaatttctgaccaagccgttcgatgaagaccagttgctgaccctgttgcagacagtgCGCGCCTGCAGCCACTTGTGGCCTTCGGCCACGGCCCGGGCGCGCACTGt                                                                                                                                               >  5:48764‑M1/100‑149 (MQ=255)   aTCTGCCTGGCGATCTGCTTGTGCGACAAGCCGCCTACCACCAGCGAGAAGACCTGGCGCTCACGCTGAGTCAGGCGCTGGTACTTTTCCTCGACCTGCCGCGCCTGCAGCCACTTGTGGCCTTCGGCCACGGCCCGGGCGCGCACTGt                                                                                                                                               >  8:3305/1‑149 (MQ=255)       gCCTGGCGATCTGCTTGTGCGACAAGCCGCCTACCACCAGCGAGAAGACCTGGCGCTCACGCTGAGTCAGGCGCTGGTACTTTTCCTCGACCTGCCGCGCCTGCAGCCACTTGTGGCCTTCGGCCACGGCCCGGGCGCGCACTGTCTg                                                                                                                                            >  2:87951/1‑148 (MQ=255)       gCCTGGCGATCTGCTTGTGCGACAAGCCGCCTACCACCAGCGAGAAGACCTGGCGCTCACGCTGAGTCAGGCGCTGGTACTTTTCCTCGACCTGCCGCGCCTGCAGCCACTTGTGGCCTTCGGCCACGGCCCGGGCGCGCACTGTCTg                                                                                                                                            >  1:272622/1‑148 (MQ=255)       gCCTGGCGATCTGCTTGTGCGACAAGCCGCCTACCACCAGCGAGAAGACCTGGCGCTCACGCTGAGTCAGGCGCTGGTACTTTTCCTCGACCTGCCGCGCCTGCAGCCACTTGTGGCCTTCGGCCACGGCCCGGGCGCGCACTGTCTg                                                                                                                                            >  3:259734/1‑148 (MQ=255)        ccTGGCTATCTGCTTGTGCGACAAGCCGCCTACCACCAGCGAGAAGACCTGGCGCTCACGCTGAGTCAGGCGCTGGTACTTTTCCTCGACCTGCCGCGCCTGCAGCCACTTGTGGCCTTCGGCCACGGCCCGGGCGCGCACTGTCt                                                                                                                                             <  6:120802/146‑1 (MQ=255)        ccTGGCGATCTGCTTGTGCGACAAGCCGCCTACCACCAGCGAGAAGACCTGGCGCTCACGCTGAGTCAGGCGCTGGTACTTTTCCTCGACCTGCCGCGCCTGCAGCCACTTGTGGCCTTCGGCCACGGCCCGGGCGCGCACTGTCt                                                                                                                                             <  3:303342/146‑1 (MQ=255)        ccTGGCGATCTGCTTGTGCGACAAGCCGCCTACCACCAGCGAGAAGACCTGGCGCTCACGCTGAGTCAGGCGCTGGTACTTTTCCTCGACCTGCCGCGCCTGCAGCCACTTGTGGCCTTCGGCCACGGCCCGGGCGCGCACTGTCTGc                                                                                                                                           >  4:137988/1‑148 (MQ=255)        ccTGGCGATCTGCTTGTGCGACAAGCCGCCTACCACCAGCGAGAAGACCTGGCGCTCACGCTGAGTCAGGCGCTGGTACTTTTCCTCGACCTGCCGCGCCTGCAGCCACTTGTGGCCTTCGGCCACGGCCCGGGCGCGCACTGTCTGc                                                                                                                                           <  3:9718/148‑1 (MQ=255)        ccTGGCGATCTGCTTGTGCGACAAGCCGCCTACCACCAGCGAGAAGACCTGGCGCTCACGCTGAGTCAGGCGCTGGTACTTTTCCTCGACCTGCCGCGCCTGCAGCCACTTGTGGCCTTCGGCCACGGCCCGGGCGCGCACTGTCTGc                                                                                                                                           <  3:137988/148‑1 (MQ=255)        ccTGGCGATCTGCTTGTGCGACAAGCCGCCTACCACCAGCGAGAAGACCTGGCGCTCACGCTGAGTCAGGCGCTGGTACTTTTCCTCGACCTGCCGCGCCTGCAGCCACTTGTGGCCTTCGGCCACGGCCCGGGCGCGCACTGTCTGc                                                                                                                                           <  4:278556/148‑1 (MQ=255)        ccTGGCGATCTGCTTGTGCGACAAGCCGCCTACCACCAGCGAGAAGACCTGGCGCTCACGCTGAGTCAGGCGCTGGTACTTTTCCTCGACCTGCCGCGCCTGCAGCCACTTGTGGCCTTCGGCCACGGCCCGGGCGCGCACTGTCTGc                                                                                                                                           <  1:188978/148‑1 (MQ=255)         ccgatgaccgtccaggccatgcgcgccggggcggtggaatttctgaccaagccgttcgatgaagaccagttgctgaccctgttgcagacagtgCGCGCCTGCAGCCACTTGTGGCCTTCGGCCACGGCCCGGGCGCGCACTGTCTGCaa                                                                                                                                         >  8:62321‑M1/94‑149 (MQ=255)         cTGGTGATCTGCTTGTGCGACAAGCCGCCTACCACCAGCGAGAAGACCTGGCGCTCACGCTGAGTCAGGCGCTGGTACTTTTCCTCGACCTGCCGCGCCTGCAGCCACTTGTGGCCTTCGGCCACGGCCCGGGCGCGCACTGTCTGCaa                                                                                                                                         <  8:311768/149‑1 (MQ=255)            gCGATCTGCTTGTGCGACAAGCCGCCTACCACCAGCGAGAAGACCTGGCGCTCACGCTGAGTCAGGCGCTGGTACTTTTCCTCGACCTGCCGCGCCTGCAGCCACTTGTGGCCTTCGGCCACGGCCCGGGCGCGCACTGTCTGCAACAg                                                                                                                                      >  4:184611/1‑149 (MQ=255)             cGATCTGCTTGTGCGACAAGCCGCCTACCACCAGCGAGAAGACCTGGCGCTCAGGCTGAGTCAGGCGCTGGTACTTTTCCTCGACCTGCCGCGCCTGCAGCCACTTGTGGCCTTCGGCCACGGCCCGGGCGCGCACTGTCTGCAACAgg                                                                                                                                     <  1:310658/149‑1 (MQ=255)               aTCTGCTTGTGCGACAAGCCGCCTACCACCAGCGAGAAGACCTGGCGCTCACGCTGAGTCAGGCGCTGGTACTTTTCCTCGACCTGCCGCGCCTGCAGCCACTTGTGGCCTTCGGCCACGGCCCGGGCGCGCACTGTCTGCAACAGGGt                                                                                                                                   >  5:59764/1‑149 (MQ=255)                    cTTGTGCGACAAGCCGCCTACCACCAGCGAGAAGACCTGGCGCTCACGCTGAGTCAGGCGCTGGTACTTTTCCTCGACCTGCCGCGCCTGCAGCCACTTGTGGCCTTCGGCCACGGCCCGGGCGCGCACTGTCTGCAACAGGGt                                                                                                                                   <  8:317600/144‑1 (MQ=255)                    cTTGTGCGACAAGCCGCCTACCACCAGCGAGAAGACCTGGCGCTCACGCTGAGTCAGGCGCTGGTACTTTTCCTCGACCTGCCGCGCCTGCAGCCACTTGTGGCCTTCGGCCACGGCCCGGGCGCGCACTGTCTGCAACAGGGTc                                                                                                                                  <  6:158951/145‑1 (MQ=255)                    cTTGTGCGACAAGCCGCCTACCACCAGCGAGAAGACCTGGCGCTCACGCTGAGTCAGGCGCTGGTACTTTTCCTCGACCTGCCGCGCCTGCAGCCACTTGTGGCCTTCGGCCACGGCCCGGGCGCGCACTGTCTGCAACAGGGTCa                                                                                                                                 <  6:59764/146‑1 (MQ=255)                    cTTGTGCGACAAGCCGCCTACCACCAGCGAGAAGACCTGGCGCTCACGCTGAGTCAGGCGCTGGTACTTTTCCTCGACCTGCCGCGCCTGCAGCCACTTGTGGCCTTCGGCCACGGCCCGGGCGCGCACTGTCTGCAACAGGGTCAGc                                                                                                                               >  3:254768/1‑148 (MQ=255)                    cTTGTGCGACAAGCCGCCTACCACCAGCGAGAAGACCTGGCGCTCACGCTGAGTCAGGCGCTGGTACTTTTCCTCGACCTGCCGCGCCTGCAGCCACTTGTGGCCTTCGGCCACGGCCCGGGCGCGCACTGTCTGCAACAGGGTCAGCa                                                                                                                              <  3:65926/149‑1 (MQ=255)                       gtgCGACAAGCCGCCTACCACCAGCGAGAAGACCTGGCGCTCACGCTGAGTCAGGCGCTGGTACTTTTCCTCGACCTGCCGCGCCTGCAGCCACTTGTGGCCTTCGGCCACGGCCCGGGCGCGCACTGTCTGc                                                                                                                                           <  5:69385/133‑1 (MQ=255)                       gtgCGACAAGCCGCCTACCACCAGCGAGAAGACCTGGCGCTCACGCTGAGTCAGGCGCTGGTACTTTTCCTCGACCTGCCGCGCCTGCAGCCACTTGTGGCCTTCGGCCACGGCCCGGGCGCGCACTGTCTGc                                                                                                                                           >  6:69385/1‑133 (MQ=255)                        tgCGACAAGCCGCCTACCACCAGCGAGAAGACCTGGCGCTCACGCTGAGTCAGGCGCTGGTACTTTTCCTCGACCTGCCGCGCCTGCAGCCACTTGTGGCCTTCGGCCACGGCCCGGGCGCGCACTGTCTGCAACAGGGTCAGCAACTg                                                                                                                          >  2:47502/1‑149 (MQ=255)                           gACAAGCCGCCTACCACCAGCGAGAAGACCTGGCGCTCACGCTGAGTCAGGCGCTGGTACTTTTCCTCGACCTGCCGCGCCTGCAGCCACTTGTGGCCTTCGGCCACGGCCCGGGCGCGCACTGTCTGCAACAGGGTCAGCAACTTGTc                                                                                                                       <  1:89593/149‑1 (MQ=255)                           gACAAGCCGCCTACCACCAGCGAGAAGACCTGGCGCTCACGCTGAGTCACGCGCTGGTACATTTCCTCGACCTGCCGCGCCTGCAGCCCCTTGTGGCCTTCGGCCACGGCCCGGGCGCGCACTGTCTGCAACAGGGTCAGCAACTGGTc                                                                                                                       >  7:317058/1‑149 (MQ=255)                                gccgccTACCACCAGCGAGAAGACCTGGCGCTCACGCTGAGTCAGGCGCTGGTACTTTTCCTCGACCTGCCGCGCCTGCAGCCACTTGTGGCCTTCGGCCACGGCCCGGGCGCGCACTGTCTGCAACAGGGTCAGCAACTGGTCTTCAt                                                                                                                  <  2:206202/149‑1 (MQ=255)                                gccgccTACCACCAGCGAGAAGACCTGGCGCTCACGCTGAGTCAGGCGCTGGTACTTTTCCTCGACCTGCCGCGCCTGCAGCCACTTGTGGCCTTCGGCCACGGCCCGGGCGCGCACTGTCTGCAACAGGGTCAGCAACTGGTCTTCAt                                                                                                                  >  1:16420/1‑149 (MQ=255)                                           ccaGCGAGAAGACCTGGCGCTCACGCTGAGTCAGGCGCTGGTACTTTTCCTCGACCTGCCGCGCCTGCAGCCACTTGTGGCCTTCGGCCACGGCCCGGGCGCGCACTGTCTGCAACAGGGTCAGCAACTGGTCTTCATCGAACGGCTTg                                                                                                       <  2:272622/149‑1 (MQ=255)                                           ccaGCGAGAAGACCTGGCGCTCACGCTGAGTCAGGCGCTGGTACTTTTCCTCGACCTGCCGCGCCTGCAGCCACTTGTGGCCTTCGGCCACGGCCCGGGCGCGCACTGTCTGCAACAGGGTCAGCAACTGGTCTTCATCGAACGGCTTg                                                                                                       >  4:9777/1‑149 (MQ=255)                                            caGCGAGAAGACCTGGCGCTCACGCTGAGTCAGGCGCTGGTACTTTTCCTCGACCTGCCGCGCCTGCAGCCACTTGTGGCCTTCGGCCACGGCCCGGGCGCGCACTGTCTGCAACAGGGTCAGCAACTGGTCTTCAt                                                                                                                  <  4:283031/137‑1 (MQ=255)                                            caGCGAGAAGACCTGGCGCTCACGCTGAGTCAGGCGCTGGTACTTTTCCTCGACCTGCCGCGCCTGCAGCCACTTGTGGCCTTCGGCCACGGCCCGGGCGCGCACTGTCTGCAACAGGGTCAGCAACTGGTCTTCAt                                                                                                                  >  3:283031/1‑137 (MQ=255)                                            caGCGAGAAGACCTGGCGCTCACGCTGAGTCAGGCGCTGGTACTTTTCCTCGACCTGCCGCGCCTGCAGCCACTTGTGGCCTTCGGCCACGGCCCGGGCGCGCACTGTCTGCAACAGGGTCAGCAACTGGTCTTCATCGAACGGCTTgg                                                                                                      >  8:292282/1‑149 (MQ=255)                                            caGCGAGAAGACCTGGCGCTCACGCTGAGTCAGGCGCTGGTACTTTTCCTCGACCTGCCGCGCCTGCAGCCACTTGTGGCCTTCGGCCACGGCCCGGGCGCGCACTGTCTGCAACAGGGTCAGCAACTGGTCTTCATCGAACGGCTTgg                                                                                                      >  3:155369/1‑149 (MQ=255)                                               cGAGAAGACCTGGCGCTCACGCTGAGTCAGGCGCTGGTACTTTTCCTCGACCTGCCGCGCCTGCAGCCACTTGTGGCCTTCGGCCACGGCCCGGGCGCGCACTGTCTGCAACAGGGTCAGCAACTGGTCTTCATCGAACGGCTTGGt                                                                                                     >  4:81855/1‑147 (MQ=255)                                                 agaagaCCTGGCGCTCACGCTGAGTCAGGCGCTGGTACTTTTCCTCGACCTGCCGCGCCTGCAGCCACTTGTGGCCTTCGGCCACGGCCCGGGCGCGCACTGTCTGCAACAGGGTCAGCAACTGGTCTTCATCGAACGGCTTGGTCAg                                                                                                  >  5:207348/1‑148 (MQ=255)                                                     gaCCTGGCGCTCACGCTGAGTCAGGCGCTGGTACTTTTCCTCGACCTGCCGCGCCTGCAGCCACTTGTGGCCTTCGGCCACGGCCCGGGCGCGCACTGTCTGCAACAGGGTCAGCAACTGGTCTTCATCGAACGGCTTGGTCAGAAAtt                                                                                             >  6:25707/1‑149 (MQ=255)                                                       ccTGGCGCTCACGCTGAGTCAGGCGCTGGTACTTTTCCTCGACCTGCCGCGCCTTCAGCCACTTGTGGCCTTCGGCCACGGCCCGGGCGCGCACTGTCTGCAACAGGGTCAGCAACTGGTCTTCATCGAACGGCTTGGTCAGAAATTcc                                                                                           <  3:234470/149‑1 (MQ=255)                                                        cTGGCGCTCACGCTGAGTCAGGCGCTGGTACTTTTCCTCGACCTGCCGCGCCTGCAGCCACTTGTGGCCTTCGGCCACGGCCCGGGCGCGCACTGTCTGCAACAGGGTAAGCAACTGGTCTTCATCGAACGGCTTGGTCAGAAATTCCa                                                                                          >  5:151730/1‑149 (MQ=255)                                                         tGGCGCTCACGCTGAGTCAGGCGCTGGTACTTTTCCTCGACCTGCCGCGCCTGCAGCCACTTGTGGCCTTCGGCCACGGCCCGGGCGCGCACTGTCTg                                                                                                                                            >  2:33610/1‑98 (MQ=255)                                                         tGGCGCTCACGCTGAGTCAGGCGCTGGTACTTTTCCTCGACCTGCCGCGCCTGCAGCCACTTGTGGCCTTCGGCCACGGCCCGGGCGCGCACTGTCTg                                                                                                                                            <  1:33610/98‑1 (MQ=255)                                                         tGGCGCTCACGCTGAGTCAGGCGCTGGTACTTTTCCTCGACCTGCCGCGCCTGCAGCCACTTGTGGCCTTCGGCCACGGCCCGGGCGCGCACTGTCTGCAACAGGGTCAGCAACTGGTCTTCATCGAACGGCTTGGTCAGAAATTCCAc                                                                                         >  3:338252/1‑149 (MQ=255)                                                               tCACGCTGAGTCAGGCGCTGGTACTTTTCCACGACCTGCCGCGCCTGCAGCCACTTGTGGCCTTCGGCCACGGCCCGGGCGCGCACTGTCTGCAACAGGGTCAGCAACTGGTCTTCATCGAACGGCTTGGTCAGAAATTCCACCGcccc                                                                                   >  3:113809/1‑149 (MQ=255)                                                                   gCTGAGTCAGGCGCTGGTACTTTTCCTCGACCTGCCGCGCCTGCAGCCACTTGTGGCCTTCGGCCACGGCCCGGGCGCGCACTGTCTGc                                                                                                                                           >  2:84909/1‑89 (MQ=255)                                                                   gCTGAGTCAGGCGCTGGTACTTTTCCTCGACCTGCCGCGCCTGCAGCCACTTGTGGCCTTCGGCCACGGCCCGGGCGCGCACTGTCTGc                                                                                                                                           <  1:84909/89‑1 (MQ=255)                                                                   gCTGAGTCAGGCGCTGGTACTTTTCCTCGACCTGCCGCGCCTGCAGCCACTTGTGGCCTTCGGCCACGGCCCGGGCGCGCACTGTCTGCAACAGGGTCAGCAACTGGTCTTCATCGAACGGCTTGGTCAGAAATTCCACCGCCCCGgcg                                                                               <  5:25707/149‑1 (MQ=255)                                                                     tGAGTCAGGCGCTGGTACTTTTCCTCGACCTGCCGCGCCTGCAGCCACTTGTGGCCTTCGGCCACGGCCCGGGCGCGCACTGTCTGCAACAGGGTCAGCAACTGGTCTTCATCGAACGGCTTGGTCAGAAATTCCACCGCCCCGgcgcg                                                                             >  7:192505/1‑149 (MQ=255)                                                                        gTCAGGCGCTGGTACTTTTCCTCGACCTGCCGCGCCTGCAGCCACTTGTGGCCTTCGGCCACGGCCCGGGCGCGCACTGTCTGCAACAGGGTCAGCAACTGGTCTTCATCGAACGGCTTGGTCAGAAATTCCACCGCCCCGGCGCGCa                                                                           <  7:3305/148‑1 (MQ=255)                                                                               gcTGGTACTTTTCCTCGACCTGCCGCGCCTGCAGCCACTTGTGGCCTTCGGCCACGGCCCGGGCGCGCACTGTCTGCAACAGGGTCAGCAACTGGTCTTCATCGAACGGCTTGGTCAGAAATTCCACCGCCCCGGCGCGCATGGCCTg                                                                    >  1:327686/1‑148 (MQ=255)                                                                                cTGGTACTTTTCCTCGACCTGCCGCGCCTGCAGCCACTTGTGGCCTTCGGCCACGGCCCGGGCGCGCACTGTCTGCAACAGGGTCAGCAACTGGTCTTCATCGAACGGCTTGGTCAGAAATTCCACCGCCCCGGCGCGCATGGCCTGGa                                                                  >  6:31556/1‑149 (MQ=255)                                                                                   gTACTTTTCCTCGACATGCCGCGCCTGCAGCCACTTGTGGCCTTCGGCCACGGCCCGGGCGCGCACTGTCTGCAACAGGGTCAGCAACTGGTCTTCATCGAACGGCTTGGTCAGAAATTCCACCGCCCCGGCGCGCATGGCCTGGACgg                                                               >  8:199373/1‑149 (MQ=255)                                                                                      cTTTTCCTCGACCTGCCGCGCCTGCAGCCACTTGTGGCCTTCGGCCACGGCCCGGGCGCGCACTGTCTGCAACAGGGTCAGCAACTGGTCTTCATCGAACGGCTTGGTCAGAAATTCCACCGCCCCGGCGCGCATGGCCTGGACGGTc                                                             <  3:81855/148‑1 (MQ=255)                                                                                         ttCCTCGACCTGCCGCGCCTGCAGCCACTTGTGGCCTTCGGCCACGGCCCGGGCGCGCACTGTCTGCAACAGGGTCAGCAACTGGTCTTCATTGAACGGCTTGGTCAGAAATTCCACCGCCCCGGCGCGCATGGCCTGGACGGTCATc                                                          <  1:294176/148‑1 (MQ=255)                                                                                          ttgcagacagtgcgcgcccgggccgtggccgaaggccacaagtggctgcaggcgcgCACTGTCTGCAACAGGGTCAGCAACTGGTCTTCATCGAACGGCTTGGTCAGAAATTCCACCGCCCCGGCGCGCATGGCCTGGACGGTCATCgg                                                        >  8:62321‑M2/57‑149 (MQ=255)                                                                                           ccTCGACCTGCCGCGCCTGCAGCCACTTGTGGCCTTCGGCCACGGCCCGGGCGCGCACTGTCTGCAACAGGGTCAGCAACTGGTCTTCATCGAACGGCTTGGTCAGAAATTCCACCGCCCCGGCGCGCATGGCCTGGACGGTCATCgg                                                        <  6:207348/148‑1 (MQ=255)                                                                                            cTCGACCTGCCGCGCCTGCAGCCACTTGTGGCCTTCGGCCACGGCCCGGGCGCGCACTGTCTGCAACAGGGTCAGCAACTGGTCTTCATCGAACGGCTTGGTCAGAAATTCCACCGCCCCGGCGCGCATGGCCTGGACGGTCATCGGGa                                                      <  1:112436/149‑1 (MQ=255)                                                                                            cTCGACCTGCCGCGCCTGCAGCCACTTGTGGCCTTCGGCCACGGCCCGGGCGCGCACTGTCTGCAACAGGGTCAGCAACTGGTCTTCATCGAACGGCTTGGTCAGAAATTCCACCGCCCCGGCGCGCATGGCCTGGACGGTCATCGGGa                                                      <  4:211784/149‑1 (MQ=255)                                                                                             tacaCCTGCAGCGCCTGCAGCCACTTGTGGCCTTCGGCCACCGCCCGGGCGCGCACTGTCTGCAACAGGGTCAGCAACTGGTCTTCATCGAACCGCTTGGTCACAAATTCCACCGCCCCGTCGCGCATGGCCTGGACGGTCATCagg                                                       >  4:137764/4‑147 (MQ=255)                                                                                               gACCTGCCGCGCCTGCAGCCACTTGTGGCCTTCGGCCACGGCCCGGGCGCGCACTGTCTGCAACAGGGTCAGCAACTGGTCTTCATCGAACGGCTTGGTCAGAAATTCCACCGCCCCGGCGCGCATGGCCTGGACGGTCATCGGGAt                                                     <  4:81849/147‑1 (MQ=255)                                                                                                acagtgcgcgcccgggccgtggccgaaggccacaagtggctgcaggcgcgCACTGTCTGCAACAGGGTCAGCAACTGGTCTTCATCGAACGGCTTGGTCAGAAATTCCACCGCCCCGGCGCGCATGGCCTGGACGGTCATCGGGATGGt                                                  >  5:48764‑M2/51‑149 (MQ=255)                                                                                                 ccTGCCGCGCCTGCAGCCACTTGTGGCCTTCGGCCCCGGCCCGGGCGCGCACTGTCTGCAACAGGGTCAGCAACTGGTCTTCATCGAACGGCTTGGTCAGAAATTCCACCGCCCCGGCGCGCATGGCCTGGACGGTCATCGGGATGGTg                                                 >  3:183257/1‑149 (MQ=255)                                                                                                 ccTGCCGCGCCTGCAGCCACTTGTGGCCTTCGGCCACGGCCCGGGCGCGCACTGTCTGCAACAGGGTCAGCAACTGGTCTTCATCGAACGGCTTGGTCAGAAATTCCACCGCCCCGGCGCGCATGGCCTGGACGGTCATCGGGATGGTg                                                 <  2:16420/149‑1 (MQ=255)                                                                                                  cTGCCGCGCCTGCAGCCACTTGTGGCCTTCGGCCACGGCCCGGGCGCGCACTGTCTGCAACAGGGTCAGCAACTGGTCTTCATCGAACGGCTTGGTCAGAAATTCCACCGCCCCGGCGCGCATGGCCTGGACGGTCATCGGGATGGTGc                                                >  3:163495/1‑149 (MQ=255)                                                                                                  agtgcgcgcccgggccgtggccgaaggccacaagtggctgcaggcgcgCACTGTCTGCAACAGGGTCAGCAACTGGTCTTCATCGAACGGCTTGGTCAGAAATTCCACCGCCCCGGCGCGCATGGCCTGGACGGTCATCGGGATGGTGc                                                >  5:21762‑M2/49‑149 (MQ=255)                                                                                                  agtgcgcgcccgggccgtggccgaaggccacaagtggctgcaggcgcgCACTGTCTGCAACAGGGTCAGCAACTGGTCTTCATCGAACGGCTTGGTCAGAAATTCCACCGCCCCGGCGCGCATGGCCTGGACGGTCATCGGGATGGTGc                                                >  4:166633‑M2/49‑149 (MQ=255)                                                                                                       GCGCCTGCAGCCACTTGTGGCCTTCGGCCACGGCCCGGGCGCGCACTGTCTGCAACAGGGTCAGCAACTGGTCTTCATCGAACGGCTTGGTCAGAAATTCCACCGCCCCGGCGCGCATGGCCTGGACGGTCATCGGGATGGTGCCGaaa                                           <  5:49068‑M1/149‑1 (MQ=255)                                                                                                       GCGCCTGCAGCCACTTGTGGCCTTCGGCCACGCCCCGGGCGCGCACTGTCTGCAACAGGGTCAGCAACTGGTCTTCATCGAACGGCTTGGTCAGAAATTCCACCGCCCCGGCGCGCATGGCCTGGAAGGTCATCGGCAAGGTGACGaaa                                           <  8:287293‑M1/149‑1 (MQ=255)                                                                                                          CCTGCAGCCACTTGTGGCCTTCGGCCACGGCCCGGGCGCGCACTGTCTGCAACAGGGTCAGCAACTGGTCTTCATCGAACGGCTTGGTCAGAAATTCCACCGCCCCGGCGCGCATGGCCTGGACGGTCATCGGGATGGTGCCGAAACCa                                        >  3:9777‑M1/1‑149 (MQ=255)                                                                                                          CCTGCAGCCACTTGTGGCCTTCGGCCACGGCCCGGGCGCGCACTGTCTGCAAAAGGGTCAGCAACTGGTCTTCATCGAACGGCTTGGTCAGAAATTCCACCGCCCCGGCGCGCATGGCCTGGACGGTCATCGGGATGGTGCCGAAACCa                                        >  8:43047‑M1/1‑149 (MQ=255)                                                                                                           CTGCAGCCACTTGTGGCCTTCGGCCACGGCCCGGGCGCACACTGTCTGCAACAGGGTCAGCAACTGGTCTTCATCGAACGGCTTGGTCAGAAATTCCACCGCCCCGGCGCGCATGGCCTGGACGGTCATCGGGATGGTGCCGAAACCAg                                       <  6:176492‑M1/149‑1 (MQ=255)                                                                                                             gCAGCCACTTGTGGCCTTCGGACACGGCCCGGGCGCGCACTGTCTGCAACAGGGTCAGCAACTGGTCTTCATCGAACGGCTTGGTCAGAAATTCCACCGCCCCGGCGCGCATGGCCTGGACGGTCATCGGGATGGTGCCGAAACCAGt                                      >  6:15190/1‑148 (MQ=255)                                                                                                              cAGCCACTTGTGGCCTTCGGCCACGGCCCGGGCGCGCACTGTCTGCAACAGGGTCAGCAACTGGTCTTCATCGAACGGCTTGGGCAGAAATTCCACCGCCCCGGCGCGCATGGCCTGGACGGTCATCGGGATGGTGCCGAAACCAGt                                      <  4:254768/147‑1 (MQ=255)                                                                                                               aGCCACTTGTGGCCTTCGGCCACGGCCCGGGCGCGCACTGTCTGCAACAGGGTCAGCAACTGGTCTTCATCGAACGGCTTGGTCAGAAATTCCACCGCCCCGGCGCGCATGGCCTGGACGGTCATCGGGATGGTGCCGAAACCAGTCAt                                   >  8:105928/1‑149 (MQ=255)                                                                                                               aGCCACTTGTGGCCTTCGGCCACGGCCCGGGCGCGCACTGTCTGCAACAGGGTCAGCAACTGGTCTTCATCGAACGGCTTGGTCAGAAATTCCACCGCCCCGGCGCGCATGGCCTGGACGGTCATCGGGATGGTGCCGAAACCAGTCAt                                   <  3:137764/149‑1 (MQ=255)                                                                                                                gCCACTTGTGGCCTTCGGCCACGGCCCGGGCGCGCACTGTCTGCAACAGGGTCAGCAACTGGTCTTCATCGAACGGCTTGGTCAGAAATTCCACCGCCCCGGCGCTCATGGCCTGGACGGTCATCGGGATGGTGCCGAAACCAGTCATg                                  <  8:192505/149‑1 (MQ=255)                                                                                                                   aCTTGTGGCCTTCGGCCACGGCCCGGGCGCGCACTGTCTGCAACAGGGTCAGCAACTGGTCTTCATCGAACGGCTTGGTCAGAAATTCCACCGCCCCGGCGCGCATGGCCTGGACGGTCATCGGGATGGTGCCGAAACCAGTCATgca                                >  3:54503/1‑146 (MQ=255)                                                                                                                        tgGCCTTCGGCCACGGCCCGGGCGCGCACTGTCTGCAACAGGGTCAGCAACTGGTCTTCATCGAACGGCTTGGTCAGAAATTCCACCGCCCCGGCGCGCATGGCCTGGACGGTCATCGGGATGGTGCCGAAACCAGTCATGAacac                             >  4:298181/1‑146 (MQ=255)                                                                                                                        tgGCCTTCGGCCACGGCCCGGGCGCGCACTGTCTGCAACAGGGTCAGCAACTGGTCTTCATCGAACGGCTTGGTCAGAAATTCCACCGCCCCGGCGCGCATGGCCTGGACGGTCATCGGGATGGTGCCGAAACCAGTCATGAacac                             <  3:298181/146‑1 (MQ=255)                                                                                                                          gCCTTCGGCCACGGCCCGGGCGCGCACTGTCTGCAACAGGGTCAGCAACTGGTCTTCATCGAACGGCTTGGTCAGAAATTCCACCGCCCCGGCGCGCATGGCCTGGACGGTCATCGGGATGGTGCCGAAACCAGTCATGAACACGATCg                        <  1:47502/149‑1 (MQ=255)                                                                                                                            cTTCTGCCACGGCCCGGGCGCGCACTGTCTGCAACAGGGTCAGCAACTGGTCTTCATCGAACGGGTTGGTCAGAAATTCCACCGCCCCGGGGCGCATGGCCTGGACGGTCATCGGGTTGGTGCCGAAACCAGTCATGAACACGATCGGc                      <  8:317058/149‑1 (MQ=255)                                                                                                                            cTTCGGCCACGGCCCGGGCGCGCACTGTCTGCAACAGGGTCAGCAACTGGTCTTCATCGAACGGCTTGGTCAGAAATTCCACCGCCCCGGCGCGCATGGCCTGGACGGTCATCGGGATGGt                                                  <  6:8129/121‑1 (MQ=255)                                                                                                                            cTTCGGCCACGGCCCGGGCGCGCACTGTCTGCAACAGGGTCAGCAAATGGTCTTCATCGAACGGCTTGGTCAGAAATTCCACCGCCCCGGCGCGCATGGCCTGGACGGTCATCGGGATGGTGCCGAAACCAGTCATGAACACGATCGGc                      >  8:28314/1‑149 (MQ=255)                                                                                                                                 gCCACGGCCCGGGCGCGCACTGTCTGCAACAGGGTCAGCAACTGGTCTTCATCGAACGGCTTGGTCAGAAATTCCACCGCCCCGGCGCGCATGGCCTGGACGGTCATCGGGATGGTGCCGAAACCAGTCATGAACACGATCGGCCAggg                 <  6:51050/149‑1 (MQ=255)                                                                                                                                 aagtggctgcaggcgcgCACTGTCTGCAACAGGGTCAGCAACTGGTCTTCATCGAACGGCTTGGTCAGAAATTCCACCGCCCCGGCGCGCATGGCCTGGACGGTCATCGGGATGGTGCCGAAACCAGTCATGAACACGATCGGCCAggg                 <  6:21762‑M2/132‑1 (MQ=255)                                                                                                                                   cACGGCCCGGGCGCGCACTGTCTGCAACAGGGTCAGCAACTGGTCTTCATCGAACGGCTTGGTCAGAAATTCCACCGCCCCGGCGCGCATGGCCTGGACGGTCATCGGGATGGTGCCGAAACCAGTCATGAACACGATCGGCCAggg                 >  3:278391/1‑147 (MQ=255)                                                                                                                                     cGGCCCGGGCGCGCACTGTCTGCAACAGGGTCAGCAACTGGTCTTCATCGAACGGCTTGGTCAGAAATTCCACCGCCCCGGCGCGCATGGCCTGGACGGTCATCGGGATGGTGCCGAAACCAGTCATGAACACGATCGGCCAGGGCAgc             <  1:87951/149‑1 (MQ=255)                                                                                                                                      ggCCCGGGCGCGCACTGTCTGCAACAGGGTCAGCAACTGGTCTTCATCGAACGGCTTGGTCAGAAATTCCACCGCCCCGgcgcgc                                                                            <  1:158392/85‑1 (MQ=255)                                                                                                                                      ggCCCGGGCGCGCACTGTCTGCAACAGGGTCAGCAACTGGTCTTCATCGAACGGCTTGGTCAGAAATTCCACCGCCCCGgcgcgc                                                                            >  2:158392/1‑85 (MQ=255)                                                                                                                                      ggCCCGGGCGCGCACTGTCTGCAACAGGGTCAGCAACTGGTCTTCATCGAACGGCTTGGTCAGAAATTCCACCGCCCCGGCGCGCATGGCCTGGACGGTCATCGGGATGGTGCCGAAACCAGTCATGAACACGATCGGCCAGGGCAgcg            <  3:258251/149‑1 (MQ=255)                                                                                                                                       gCCCGGGCGCGCACTGTCTGCAACAGGGTCAGCAACTGGTCTTCATCGAACGGCTTGGTCAGAAATTCCACCGCCCCGGCGCGCATGGCCTGGACGGTCATCGGGATGGTGCCGAAACCAGTCATGAACACGATCGGCCAGGGCAgcgc           <  2:327686/149‑1 (MQ=255)                                                                                                                                        cccGGGCGCGCACTGTCTGCAACAGGGTCAGCAACTGGTCTTCATCGAACGGCTTGGTCAGAAATTCCACCGCCCCGGCGCGCATGGCCTGGACGGTCATCGGGATGGTGCCGAAACCAGTCATGAACACGATCGGCCAGGGCAgcgc           >  6:251236/1‑148 (MQ=255)                                                                                                                                              cgcgCACTGTCTGCAACAGGGTCAGCAACTGGTCTTCATCGAACGGCTTGGTCAGAAATTCCACCGCCCCGGCGCGCATGGCCTGGACGGTCATCGGGATGGTGCCGAAACCAGTCATGAACACGATCGGCCAGGGCAGCGCCAGCCgg    <  7:199373‑M2/145‑1 (MQ=255)                                                                                                                                                 gCACTGTCTGCAACAGGGTCAGCAACTGGTCTTCATCGAACGGCTTGGTCAGAAATTCCACCGCCCCGGCGCGCATGGCCTGGACGGTCATCGGGATGGTGCCGAAACCAGTCATGAACACGATCGGCCAGGGCAGCGCCAGCCGGca  >  6:40732‑M2/2‑148 (MQ=255)                                                                                                                                                  |                                                                                                                                                   CGATCTGCCTGGCGATCTGCTTGTGCGACAAGCCGCCTACCACCAGCGAGAAGACCTGGCGCTCACGCTGAGTCAGGCGCTGGTACTTTTCCTCGACCTGCCGCGCCTGCAGCCACTTGTGGCCTTCGGCCACGGCCCGGGCGCGCACTGTCTGCAACAGGGTCAGCAACTGGTCTTCATCGAACGGCTTGGTCAGAAATTCCACCGCCCCGGCGCGCATGGCCTGGACGGTCATCGGGATGGTGCCGAAACCAGTCATGAACACGATCGGCCAGGGCAGCGCCAGCCGGCA  >  NC_002947/5978255‑5978546

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.