New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	513980 =	53 (0.850)	4 (0.070)	4/252	NT	6.8%	intergenic (+14/+63)	yhfA/PP_0426	hypothetical protein/membrane protein
	?	NC_002947	514034 =	60 (1.020)					intergenic (+68/+9)	yhfA/PP_0426	hypothetical protein/membrane protein

TACCAAAAGCGCCGGGAGCGGTTGAGCCAGGCGCTAAGAAGCCGTCTTCCGCAATGGTTGCGGATGGCCCTTCCGGCCCTGCGCAACTGAAACTCGCCCGGGCCGCGGGTGGGAGCGGGTTCACCCGCTTCCACAAGGGCTGCAAAGCGGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/514132‑513980 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcggcccGGGCGAGTTTCAGTTGCGCAGGGCCGGAAGGGCCATCCGCAACCATTGCGGAAGACGGCTTCTTAGCGCCTGGCTCAACCGCTCCCGGCGCTTTTGGTAAACCAGGCCAAGCCAGATAACCCCCAGCCCGATCATGGTCAGCACCAC  >  NC_002947/514034‑514180                                                                                                                                                                                                                                                                                                              TACCAAAAGCGCCGGGAGCGGTTGAGCCAGGCGCTAAGAAGCCGTCTTCCGCAATGGTTGCGGATGGCCCTTCCGGCCCTGCGCAACTGAAACTCGCCCGGGCCGCGGGTGGGAGCGGGTTCACCCGCTTCCACAAGGGCTGCAAAGC                                                                                                                                                          <  6:7922/148‑1   CCAAAAGCGCCGGGAGCGGTTGAGCCAGGCGCTAAGAAGCCGTCTTCCGCAATGGTTGCGGATGGCCCTTCCGGCCCTGCGCAACTGAAACTCGCCCGGGCCGCGGGTGGGAGCGGGTTCACCCGCTTCCACAAGGGCTGCAAAGCGG                                                                                                                                                        <  4:133014/148‑1    CAAAAGCGCCGGGAGCGGTTGAGCCAGGCGCTAAGAAGCCGTCTTCCGCAATGGTTGCGGATGGCCCTTCCGGCCCTGCGCAACTGAAACTCGCCCGGGCCGCGGGTGGGAGCGGGTTCACCCGCTTCCACAAGGGCTGCAAAGCGGCC                                                                                                                                                      >  2:357390/1‑149    CAAAAGCGCCGGGAGCGGTTGAGCCAGGCGCTAAGAAGCCGTCTTCCGCAATGGTTGCGGATGGCCCTTCCGGCCCTGCGCAACTGAAACTCGCCCGGGCCGCGGGTGGGAGCGGGTTCACCCGCTTCCACAAGGGCTGCAAAGCGGCC                                                                                                                                                      <  4:140665/149‑1    CAAAAGCGCCGGGAGCGGTTGAGCCAGGCGCTAAGAAGCCGTCTTCCGCAATGGTTGCGGATGGCCCTTCCGGCCCTGCGCAACTGAAACTCGCCCGGGCCGCGGGTGGGAGCGGGTTCACCCGCTTCCACAAGGGCTGCAAAGCGGCC                                                                                                                                                      >  5:328584/1‑149                                                                                              TCGCCCGGGCCGCGGGTGGGAGCGGGTTCACCCGCTTCCACAAGGGCTGCAAAGCGGCCCGGGCGAGTTTCAGTTGCGCAGGGCCGGAAGGGCCATCCGCAACCATTGCGGAAGACGGCTTCTTAGCGCCTGGCTCAACCGCTCCCGGC                                                            >  1:197559/1‑149                                                                                                 CCCGGGCCGCGGGTGGGAGCGGGTTCACCCGCTTCCACAAGGGCTGCAAAGCGGCCCGGGCGAGTTTCAGTTGCGCAGGGCCGGAAGGGCCATCCGCAACCATTGCGGAAGACGGCTTCTTAGCGCCTGGCTCAACCGCTCCCGGCGCT                                                         >  3:236208/1‑149                                                                                                    GGGCCGCGGGTGGGAGCGGGTTCACCCGCTTCCACAAGGGCTGCAAAGCGGCCCGGGCGAGTTTCAGTTGCGCAGGGCCGGAAGGGCCATCCGCAACCATTGCGGAAGACGGCTTCTTAGCGCCTGGCTCAACCGCTCCCGGCGCTTTT                                                      >  1:95684/1‑149                                                                                                                           ACCCGCTTCCACAAGGGCTGCAAAGCGGCCCGGGCGAGTTTCAGTTGCGCAGGGCCGGAAGGGCCATCCGCAACCATTGCGGAAGACGGCTTCTTAGCGCCTGGCTCAACCGCTCCCGGCGCTTTTGGTAAACCAGGCCAAGCCAGAT                                <  4:236208/148‑1                                                                                                                                                 AAGCGGCCCGGGCGAGTTTCAGTTGCGCAGGGCCGGAAGGGCCATCCGCAACCATTGCGGAAGACGGCTTCTTAGCGCCTGGCTCAACCGCTCCCGGCGCTTTTGGTAAACCAGGCCAAGCCAGATAACCCCCAGCCCGATCATGGTCA         <  2:95684/149‑1                                                                                                                                                    CGGCCCGGGCGAGTTTCAGTTGCGCAGGGCCGGAAGGGCCATCCGCAACCATTGCGGAAGACGGCTTCTTAGCGCCTGGCTCAACCGCTCCCGGCGCTTTTGGTAAACCAGGCCAAGCCAGATAACCCCCAGCCCGATCATGGTCAGCA      <  1:148598/149‑1                                                                                                                                                        CCGGGCGAGTTTCAGTTGCGCAGGGCCGGAAGGGCCATCCGCAACCATTGCGGAAGACGGCTTCTTAGCGCCTGGCTCAACCGCTCCCGGCGCTTTTGGTAAACCAGGCCAAGCCAGATAACCCCCAGCCCGATCATGGTCAGCACCAC  >  8:169845/1‑149                                                                                                                                                                                                                                                                                                              TACCAAAAGCGCCGGGAGCGGTTGAGCCAGGCGCTAAGAAGCCGTCTTCCGCAATGGTTGCGGATGGCCCTTCCGGCCCTGCGCAACTGAAACTCGCCCGGGCCGCGGGTGGGAGCGGGTTCACCCGCTTCCACAAGGGCTGCAAAGCGGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/514132‑513980 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcggcccGGGCGAGTTTCAGTTGCGCAGGGCCGGAAGGGCCATCCGCAACCATTGCGGAAGACGGCTTCTTAGCGCCTGGCTCAACCGCTCCCGGCGCTTTTGGTAAACCAGGCCAAGCCAGATAACCCCCAGCCCGATCATGGTCAGCACCAC  >  NC_002947/514034‑514180

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.