New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 513980 =53 (0.850)4 (0.070) 4/252 NT 6.8% intergenic (+14/+63) yhfA/PP_0426 hypothetical protein/membrane protein
?NC_002947 514034 = 60 (1.020)intergenic (+68/+9) yhfA/PP_0426 hypothetical protein/membrane protein

GGCGTGGGCTGAAAGAAGCGCAGGTCAAGCGGGCGGTGGAGCTGTCGGCGGAAAAGTATTGCTCGGCTTCGATCATGCTCGAGCGTGCCGGGGTTGAGATTACCCATGGGTATGAAATCGTAGAGCTGGGTTAAGGCTGAGATTCCGGGGCCGCTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCACCCGCGGCCCGGG‑‑CGAGTTTCAGTTGCGCAGGGCCGGAAGGGCCATCCGCAACCATTGCGGAAGACGGCTTCTTAGCGCCTGGCTCAACCGCTCCCGGCGCTTT  >  NC_002947/513833‑514127
                                                                                                                                                   |                                                                                                                                                      
gtggtgctgaccatgatcgggctgggggttatctggcttggcctggtttaccaaaagcgccgggagcggttgagccaggcgctaagaagccgtcttccgcaatggttgcggatggcccttccggccctgcgcaactgaaactcgcccgg                                                                                                                                                       >  8:169845‑M1/148‑149 (MQ=255)
 gCGTGGGGTGTAAGTATCGCTGGTCAAGCGGGCGGTGGTGCTGTCGTCGGAAAAGTATTGCTCGGCTTCGATCATGCTCGAGCGTGCCGGGGTTGAGATTACCCATTGGTATGAAATCGTAGAGCTGGGTTAAGGCTGAGATTCCggg                                                                                                                                                       <  2:287826/148‑1 (MQ=255)
    tgctgaccatgatcgggctgggggttatctggcttggcctggtttaccaaaagcgccgggagcggttgagccaggcgctaagaagccgtcttccgcaatggttgcggatggcccttccggccctgcgcaactgaaactcgcccGGGCCg                                                                                                                                                   <  1:148598‑M1/6‑1 (MQ=255)
       tgaccatgatcgggctgggggttatctggcttggcctggtttaccaaaagcgccgggagcggttgagccaggcgctaagaagccgtcttccgcaatggttgcggatggcccttccggccctgcgcaactgaaactcgcccGGGCCGCtt                                                                                                                                                <  2:95684‑M1/9‑1 (MQ=255)
        cTGAAAGAAGCGCAGGTCAAGCGGGCGGTGGAGCTGTCGGCGGAAAAGTATTGCTGGGCTTCGATCATGCTCGAGCGTGCCGGGGTTGAGATTACCCATGGGTATGAAATCGTAGAGCTGGGTTAAGGCTGAGATTCCGGGGCCGCttt                                                                                                                                               <  3:273831/149‑1 (MQ=255)
           aaaGAAGCGCAGGTCAAGCGGGCGGTGGAGCTGTCGGCGGAAAAGTATTGCTCGGCTTCGATCATGCTCGAGCGTGCCGGGGTTGAGATTACCCATGGGTATGAAATCGTAGAGCTGGGTTAAGGCTGAGATTCCGGGGCCGCTTTg                                                                                                                                              >  5:299447/1‑147 (MQ=255)
           aaaGAAGCGCAGGTCAAGCGGGCGGTGGAGCTGTCGGCGGAAAAGTATTGCTCGGCTTCGATCATGCTCGAGCGTGCCGGGGTTGAGATTACCCATGGGTATGAAATCGTAGAGCTGGGTTAAGGCTGAGATTCCGGGGCCGCTTTGCa                                                                                                                                            >  4:76315/1‑149 (MQ=255)
           aaaGAAGCGCAGGTCAACCCGGCGGTGGCGCTGCCGGCGGATACCAACTGCTCGGCTTCGATCATGCTGGAGCGGGCCTGGGTTGATATTACCCATGCGTATCAAATCGTACATCGGGCTTACGGCTGAGATTCCGGGCCCGCTTTg                                                                                                                                              <  4:219748/147‑1 (MQ=255)
                   gcAGGTCAAGCGGGCGGTGGAGCTGTCGGCGGAAAAGTATTGCTCGGCTTCGATCATGCTCGAGCGTGCCGGGGTTGAGATTACCCATGGGTATGAAATCGTAGAGCTGGGTTAAGGCTGAGATTCCGGGGCCGCTTTGCAGCCCTtgt                                                                                                                                    <  7:133545/149‑1 (MQ=255)
                   gcAGGTCAAGCGGGCGGTGGAGCTGTCGGCGGAAAAGTATTGCTCGGCTTCGATCATGCTCGAGCGTGCCGGGGTTGAGATTACCCATGGGTATGAAATCGTAGAGCTGGGTTAAGGCTGAGATTCCGGGGCCGCTTTGCAGCCCTtgt                                                                                                                                    >  5:165574/1‑149 (MQ=255)
                           aGCGGGCGGTGGAGCTGTCGGCGGAAAAGTATTGCTCGGCTTCGATCATGCTCGAGCGTGCCGGGGTTGAGATTACCCATGGGTATGAAATCGTAGAGCTGGGTTAAGGCTGAGATTCCGGGGCCGCTTTGCAGCCCTTGTGGAAGCgg                                                                                                                            <  6:299447/149‑1 (MQ=255)
                             cgggcggTGGAGCTGTCGGCGGAAAAGTATTGCTCGGCTTCGATCATGCTCGAGCGTGCCGGGGTTGAGATTACCCATGGGTATGAAATCGTAGAGCTGGGTTAAGGCTGAGATTCCGGGGCCGCTTTGCAGCCCTTGTGGAAGCGGGt                                                                                                                          <  4:234518/149‑1 (MQ=255)
                              atctggcttggcctggtttaccaaaagcgccgggagcggttgagccaggcgctaagaagccgtcttccgcaatggttgcggatggcccttccggccctgcgcaactgaaactcgcccGGGCCGCTTTGCAGCCCTTGTGGAAGCGGGt                                                                                                                          <  4:236208‑M1/31‑1 (MQ=255)
                                 cggTGGAGCTGTCGGCGGAAAAGTATTGCTCGGCTTCGATCATGCTCGAGCGTGCCGGGGTTGAGATTACCCATGGGTATGAAATCGTAGAGCTGGGTTAAGGCTGAGATTCCGGGGCCGCTTTGCAGCCCTTGTGGAAGCGGGTGAAc                                                                                                                      <  8:72023/149‑1 (MQ=255)
                                      gAGCTGTCGGCGGAAAAGTATTGCTCGGCTTCGATCATGCTCGAGCGTGCCGGGGTTGAGATTACCCATGGGTATGAAATCGTAGAGCTGGGTTAAGGCTGAGATTCCGGGGCCGCTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCt                                                                                                                 >  3:281916/1‑149 (MQ=255)
                                       aGCTGTCGGCGGAAAAGTATTGCTCGGCTTCGATCATGCTCGAGCGTGCCGGGGTTGAGATTACCCATGGGTATGAAATCGTAGAGCTGGGTTAAGGCTGAGATTCCGGGGCCGCTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTc                                                                                                                <  7:141850/149‑1 (MQ=255)
                                            tCGGCGGAAAAGTATTGCTCGGCTTCGATCATGCTCGAGCGTGCCGGGGTTGAGATTACCCATGGGTATGAAATCGTAGAGCTGGGTTAAGGCTGAGATTCCGGGGCCGCTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCAcc                                                                                                          >  4:226370/1‑149 (MQ=255)
                                              ggcggAAAAGTATTGCTCGGCTTCGATCATGCTCGAGCGTGCCGGGGTTGAGATTACCCATGGGTATGAAATCGTAGAGCTGGGTTAAGGCTGAGATTCCGGGGCCGCTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCACCcg                                                                                                        >  7:268722/1‑149 (MQ=255)
                                               gcggAAAAGTATTGCTCGGCTTCGATCATGCTCGAGCGTGCCGGGGTTGAGATTACCCATGGGTATGAAATCGTAGAGCTGGGTTAAGGCTGAGATTCCGGGGCCGCTTTGCAGCCCTTGTGGGAGCGGGTTCACCCGCTTCCAcaagg                                                                                                       <  1:234713/149‑5 (MQ=255)
                                                 ggAAAAGTATTGCTCGGCTTCGATCATGCTCGAGCGTGCCGGGGTTGAGATTACCCATGGGTATGAAATCGTAGAGCTGGGTTAAGGCTGAGATTCCGGGGCCGCTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCACCCGCgg                                                                                                     >  5:130144/1‑149 (MQ=255)
                                                 ggAAAAGTATTGCTCGGCTTCGATCATGCTCGAGCGTGCCGGGGTTGAGATTACCCATGGGTATGAAATCGTAGAGCTGGGTTAAGGCTGAGATTCCGGGGCCGCTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCACCCGCgg                                                                                                     >  5:124787/1‑149 (MQ=255)
                                                    aaaagcgccgggagcggttgagccaggcgctaagaagccgtcttccgcaatggttgcggatggcccttccggccctgcgcaactgaaactcgcccGGGCCGCTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCACCCGCGGccc                                                                                                  >  1:95684‑M1/96‑149 (MQ=255)
                                                       agcgccgggagcggttgagccaggcgctaagaagccgtcttccgcaatggttgcggatggcccttccggccctgcgcaactgaaactcgcccGGGCCGCTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCACCCGCGGCCCggg                                                                                               >  3:236208‑M1/93‑149 (MQ=255)
                                                        tATTGCTCGGCTTCGATCATGCTCGAGCGTGCCGGGGTTGAGATTACCCATGGGTATGAAATCGTAGAGCTGGGTTAAGGCTGAGATTCCGGGGCCGCTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCACCCGCGGCCCGGG‑‑c                                                                                            <  5:349669/149‑1 (MQ=255)
                                                          gccgggagcggttgagccaggcgctaagaagccgtcttccgcaatggttgcggatggcccttccggccctgcgcaactgaaactcgcccGGGCCGCTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCACCCGCGGCCCGGG‑‑CGa                                                                                          >  1:197559‑M1/90‑149 (MQ=255)
                                                                   ttCGATCATGCTCGAGCGTGCCGGGGTTGAGATTACCCATGGGTATGAAATCGTAGAGCTGGGTTAAGGCTGAGATTCCGGGGCCGCTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCACCCGCGGCCCGGG‑‑CGAGTTTCAGtt                                                                                 >  5:106847/1‑149 (MQ=255)
                                                                     cGATCATGCTCGAGCGTGCCGGGGTTGAGATTACCCATGGGTATGAAATCGTAGAGCTGGGTTAAGGCTGAGATTCCGGGGCCGCTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCACCCGCGGCCCGGG‑‑CGAGTTTCAGTTgc                                                                               >  2:164628/1‑149 (MQ=255)
                                                                      gATCATGCTCGAGCGTGCCGGGGTTGAGATTACCCATGGGTATGAAATCGTAGAGCTGGGTTAAGGCTGAGATTCCGGGGCCGCTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCACCCGCGGCCCGGG‑‑CGAGTTTCAGTTgcg                                                                              >  4:102578/1‑149 (MQ=255)
                                                                      gATCATGCTCGAGCGTGCCGGGGTTGAGATTACCCATGGGTATGAAATCGTAGAGCTGGGTTAAGGCTGAGATTCCGGGGCCGCTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCACCCGCGGCCCGGG‑‑CGAGTTTCAGTTgcg                                                                              >  6:11239/1‑149 (MQ=255)
                                                                      gATCATGCTCGAGCGTGCCGGGGTTGAGATTACCCATGGGTATGAAATCGTAGAGCTGGGTTAAGGCTGAGATTCCGGGGCCGCTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCACCCGCGGCCCGGG‑‑CGAGTTTCAGTTgcg                                                                              >  6:328584/1‑149 (MQ=255)
                                                                             cTCGAGCGTGCCGGGGTTGAGATTACCCATGGGTATGAAATCGTAGAGCTGGGTTAAGGCTGAGATTCCGGGGCCGCTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCACCCGCGGCCCGGG‑‑CGAGTTTCAGTTGCGCAGGGcc                                                                       >  2:382320/1‑149 (MQ=255)
                                                                              tCGAGCGTGCCGGGGTTGAGATTACCCATGGGTATGAAATCGTAGAGCTGGGTTAAGGCTGAGATTCCGGGGCCGCTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCACCCGCGGCCCGGG‑‑CGAGTTTCAGTTGCGCAGGGCCg                                                                      >  8:212102/1‑149 (MQ=255)
                                                                                gAGCGTGCCGGGGTTGAGATTACCCATGGGTATGAAATCGTAGAGCTGGGTTAAGGCTGAGATTCCGGGGCCGCTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCACCCGCGGCCCGGG‑‑CGAGTTTCAGTTGCGCAGGGCCgg                                                                     >  4:186884/1‑148 (MQ=255)
                                                                                    gTGCCGGGGTTGAGATTACCCATGGGTATGAAATCGGAGAGCTGGGTTAAGGCTGAGAGTCCGGGGCCGCTTTGCAGCCCGTGTGGAAGCGGGTGAACCCGCTCCCACCCGCGGCCCGGG‑‑CGAGTTTCAGTTGCGCAGGGCCGGAAggg                                                                <  3:76315/149‑1 (MQ=255)
                                                                                       ccGGGGTTGAGATTACCCATGGGTATGAAATCGTAGAGCTGGGTTAAGGCTGAGATTCCGGGGCCGCTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCACCCGCGGCCCGGG‑‑CGAGTTTCAGTTGCGCAGGGCCGGAAGGGCCa                                                             <  3:226370/149‑1 (MQ=255)
                                                                                         ggggTTGAGATTACCCATGGGTATGAAATCGTAGAGCTGGGTTAAGGCTGAGATTCCGGGGCCGCTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCACCCCGCGGCCCGGG‑‑CGAGTTTCAGTTGCGCAGGGCCGGAAGGGCCAt                                                            <  1:80530/149‑1 (MQ=255)
                                                                                            gTTGAGATTACCCATGGGTATGAAATCGTAGAGCTGGGTTAAGGCTGAGATTCCGGGGCCGCTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCACCCGCGGCCCGGG‑‑CGAGTTTCAGTTGCGCAGGGCCGGAAGGGCCATCCg                                                         >  5:177740/1‑148 (MQ=255)
                                                                                            gTTGAGATTACCCATGGGTATGAAATCGTAGAGCTGGGTTAAGGCTGAGATTCCGGGGCCGCTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCACCCGCGGCCCGGG‑‑CGAGTTTCAGTTGCGCAGGGCCGGAAGGGCCATCCg                                                         >  7:166513/1‑148 (MQ=255)
                                                                                            gTTGAGATTACCCATGGGTATGAAATCGTAGAGCTGGGTTAAGGCTGAGATTCCGGGGCCGCTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCACACCCGCGGCCCGGG‑‑CGAGTTTCAGTTGCGCAGGGCCGGAAGGGCCATCCg                                                         >  1:357390/1‑148 (MQ=255)
                                                                                               gagaTTACCCATGGGTATGAAATCGTAGAGCTGGGTTAAGGCTGAGATTCCGGGGCCGCTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCACCCGCGGCCCGGG‑‑CGAGTTTCAGTTGCGCAGGGCCGGAAGGGCCATCCGCaa                                                      <  6:165574/148‑1 (MQ=255)
                                                                                               gagaTTACCCATGGGTATGAAATCGTAGAGCTGGGTTAAGGCTGAGATTCCGGGGCCGCTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCACCCGCGGCCCGGG‑‑CGAGTTTCAGTTGCGCAGGGCCGGAAGGGCCATCCGCa                                                       <  4:280891/147‑1 (MQ=255)
                                                                                               gagaTTACCCATGGGTATGAAATCGTAGAGCTGGGTTAAGGCTGAGATTCCGGGGCCGCTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCACCCGCGGCCCGGG‑‑CGAGTTTCAGTTGCGCAGGGCCGGAAGGGCCATCCGCa                                                       >  3:280891/1‑147 (MQ=255)
                                                                                                 gaTTACCCATGGGTATGAAATCGTAGAGCTGGGTTAAGGCTGAGATTCCGGGGCCGCTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCACCCGCGGCCCGGG‑‑CGAGTTTCAGTTGCGCAGGGCCGGAAGGGCCATCCGCAACCa                                                   >  3:354665/1‑149 (MQ=255)
                                                                                                  aTTACCCATGGGTATGAAATCGTAGAGCTGGGTTAAGGCTGAGATTCCGGGGCCGCTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCACCCGCGGCCCGGG‑‑CGAGTTTCAGTTGCGCAGGGCCGGAAGGGCCATCAGCAACCAt                                                  >  2:148598/1‑149 (MQ=255)
                                                                                                      cccATGGGTATGAAATCGTAGAGCTGGGTTAAGGCTGAGATTCCGGGGCCGCTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCACCCGCGGCCCGGG‑‑CGAGTTTCAGTTGCGCAGGGCCGGAAGGGCCATCCGCAACCATTGc                                               <  8:268722/148‑1 (MQ=255)
                                                                                                      cccATGGGTATGAAATCGTAGAGCTGGGTTAAGGCTGAGATTCCGGGGCCGCTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCACCCGCGGCCCGGG‑‑CGAGTTTCAGTTGCGCAGGGCCGGAAGGGCCATCCGCAACCATTGc                                               <  6:124787/148‑1 (MQ=255)
                                                                                                      cccATGGGTATGAAATCGTAGAGCTGGGTTAAGGCTGAGATTCCGGGGCCGCTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCACCCGCGGCCCGGG‑‑CGAGTTTCAGTTGCGCAGGGCCGGAAGGGCCATCCGCAACCATTGc                                               <  6:130144/148‑1 (MQ=255)
                                                                                                      cccATGGGTATGAAATCGTAGAGCTGGGTTAAGGCTGAGATTCCGGGGCCGCTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCACCCGCGGCCCGGG‑‑CGAGTTTCAGTTGCGCAGGGCCGGAAGGGCCATCCGCAACCATTGCg                                              >  2:118570/1‑149 (MQ=255)
                                                                                                         aTGGGTATGAAATCGTAGAGCTGGGTTAAGGCTGAGATTCCGGGGCCGCTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCACCCGCGGCCCGGG‑‑CGAGTTTCAGTTGCGCAGGGCCGGAAGGGCCATCCGCAACCATTGCGGaa                                           <  1:164628/149‑1 (MQ=255)
                                                                                                            ggTATGAAATCGTAGAGCTGGGTTAAGGCTGAGATTCCGGGGCCGCTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCACCCGCGGCCCGGG‑‑CGAGTTTCAGTTGCGCAGGGCCGGAAGGGCCATCCGCAACCATTGCGGAAGa                                         <  2:189045/148‑1 (MQ=255)
                                                                                                             gTATGAAATCGTAGAGCTGGGTTAAGGCTGAGATTCCGGGGCCGCTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCACCCGCGGCCCGGG‑‑CGAGTTTCAGTTGCGCAGGGCCGGAAGGGCCATCCGCAACCATTGCGGAAGACg                                       <  3:186884/149‑1 (MQ=255)
                                                                                                               aTGAAATCGTAGAGCTGGGTTAAGGCTGAGATTCCGGGGCCGCTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCGCACCGGGGGCCCGGGGAGGAATTTAAATTTGCCAGGGCCGGAAGGGCCAAACCCAACCAATGCGGaaacag                                       >  1:125859/1‑145 (MQ=255)
                                                                                                                   aaTCGTAGAGCTGGGTTAAGGCTGAGATTCCGGGGCCGCTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCACCCGCGGCCCGGG‑‑CGAGTTTCAGTTGCGCAGGGCCGGAAGGGCCATCCGCAACCATTGCGGAAGACGGcttct                                 <  5:11239/149‑1 (MQ=255)
                                                                                                                          gagCTGGGTTAAGGCTGAGATTCCGGGGCCGCTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCACCCGCGGCCCGGG‑‑CGAGTTTCAGTTGCGCAGGGCCGGAAGGGCCATCCGCAACCATTGCGGAAGACGGCTTCTTAGCGcc                          <  1:382320/149‑1 (MQ=255)
                                                                                                                          gagCTGGGTTAAGGCTGAGATTCCGGGGCCGCTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCACCCGCGGCCCGGG‑‑CGAGTTTCAGTTGCGCAGGGCCGGAAGGGCCATCCGCAACCATTGCGGAAGACGGCTTCTTAGCGcc                          >  2:232178/1‑149 (MQ=255)
                                                                                                                            gCTGGGTTAAGGCTGAGATTCCGGGGCCGCTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCACCCGCGGCCCGGG‑‑CGAGTTTCAGTTGCGCAGGGCCGGAAGGGCCATCCGCAACCATTGCGGAAGACGGCTTCTTAGCGCCTg                        >  3:14739/1‑149 (MQ=255)
                                                                                                                            gCTGGGTTAAGGCTGAGATTCCGGGGCCGCTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCACCCGCGGCCCGGG‑‑CGAGTTTCAGTTGCGCAGGGCCGGAAGGGCCATCCGCAACCATTGCGGAAGACGGCTTCTTAGCGCCTg                        >  8:123835/1‑149 (MQ=255)
                                                                                                                                ggTTAAGGCTGAGATTCCGGGGCCGCTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCACCCGCGGCCCGGG‑‑CGAGTTTCAGTTGCGCAGGGCCGGAAGGGCCATCCGCCACCATTGCGGAAGACGGCTTCTTAGCGCCTGGCt                     >  4:112041/1‑148 (MQ=255)
                                                                                                                                      ggCTGAGATTCCGGGGCCGCTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCACCCGCGGCCCGGG‑‑CGAGTTTCAGTTGCGCAGGGCCGGAAGGGCCATCCGCAACCATTGCGGAAGACGGCTTCTTAGCGCCTGGCTCAACCGc              <  8:166513/149‑1 (MQ=255)
                                                                                                                                         tGAGATTCCGGGGCCGCTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCACCCGCGGCCCGGG‑‑CGAGTTTCAGTTGCGCAGGGCCAGAAGGGCCATCCGCAACCATTGCGGAAGACGGCTTCTTAGCGCCTGGCTCAACCGCTcc           >  4:69877/1‑149 (MQ=255)
                                                                                                                                             aTTCCGGGGCCGCTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCACCCGCGGCCCGGG‑‑CGAGTTTCAGTTGCGCAGGGCCGGAAGGGCCATCCGCAACCATTGCGGAAGACGGCTTCTTAGCGCCTGGCTCAACCGCTCCCGgc       <  4:281916/149‑1 (MQ=255)
                                                                                                                                                 cGGGGCCGCTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCACCCGCGGCCCGGG‑‑CGAGTTTCAGTTGCGCAGGGCCGGAAGGGCCATCCGCAACCATTGCGGAAGACGGCTTCTTAGCGCCTGGCTCAACCGCTCCCGGCGCtt   <  6:177740/149‑1 (MQ=255)
                                                                                                                                                  ggggCCGCTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCACCCGCGGCCCGGG‑‑CGAGTTTCAGTTGCGCAGGGCCGGAAGGGCCATCCGCAACCATTGCGGAAGACGGCTTCTTAGCGCCTGGCTCAACCGCTCCCGGCGCttt  <  6:106847/149‑1 (MQ=255)
                                                                                                                                                  ggggCCGCTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCACCCGCGGCCCGGG‑‑CGAGTTTCAGTTGCGCAGGGCCAGAAGGGCCATCCGCAACCATTGCGGAAGACGGCTTCTTAGCGCCTGGCTCAACCGCTCCCGGCGCttt  <  3:69877/149‑1 (MQ=255)
                                                                                                                                                   |                                                                                                                                                      
GGCGTGGGCTGAAAGAAGCGCAGGTCAAGCGGGCGGTGGAGCTGTCGGCGGAAAAGTATTGCTCGGCTTCGATCATGCTCGAGCGTGCCGGGGTTGAGATTACCCATGGGTATGAAATCGTAGAGCTGGGTTAAGGCTGAGATTCCGGGGCCGCTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCACCCGCGGCCCGGG‑‑CGAGTTTCAGTTGCGCAGGGCCGGAAGGGCCATCCGCAACCATTGCGGAAGACGGCTTCTTAGCGCCTGGCTCAACCGCTCCCGGCGCTTT  >  NC_002947/513833‑514127

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.