New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	513980 =	53 (0.850)	4 (0.070)	4/252	NT	6.8%	intergenic (+14/+63)	yhfA/PP_0426	hypothetical protein/membrane protein
	?	NC_002947	514034 =	60 (1.020)					intergenic (+68/+9)	yhfA/PP_0426	hypothetical protein/membrane protein

GTATTGCTCGGCTTCGATCATGCTCGAGCGTGCCGGGGTTGAGATTACCCATGGGTATGAAATCGTAGAGCTGGGTTAAGGCTGAGATTCCGGGGCCGCTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCA‑CCCGCGGCCCGGG‑‑CGAGTTTCAGTTGCGCAGGGCCGGAAGGGCCATCCGCAACCATTGCGGAAGACGGCTTCTTAGCGCCTGGCTCAACCGCTCCCGGCGCTTTTGGTAAACCAGGCCAAGCCAGATAACCCCCAGCCCGATCATGGTCAGCACCAC  >  NC_002947/513888‑514180                                                                                                                                                    |                                                                                                                                                     agcgccgggagcggttgagccaggcgctaagaagccgtcttccgcaatggttgcggatggcccttccggccctgcgcaactgaaactcgcccGGGCCGCTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCA‑CCCGCGGCCCggg                                                                                                                                                    >  3:236208‑M1/93‑149 (MQ=255)  tATTGCTCGGCTTCGATCATGCTCGAGCGTGCCGGGGTTGAGATTACCCATGGGTATGAAATCGTAGAGCTGGGTTAAGGCTGAGATTCCGGGGCCGCTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCA‑CCCGCGGCCCGGG‑‑c                                                                                                                                                 <  5:349669/149‑1 (MQ=255)    gccgggagcggttgagccaggcgctaagaagccgtcttccgcaatggttgcggatggcccttccggccctgcgcaactgaaactcgcccGGGCCGCTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCA‑CCCGCGGCCCGGG‑‑CGa                                                                                                                                               >  1:197559‑M1/90‑149 (MQ=255)             ttCGATCATGCTCGAGCGTGCCGGGGTTGAGATTACCCATGGGTATGAAATCGTAGAGCTGGGTTAAGGCTGAGATTCCGGGGCCGCTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCA‑CCCGCGGCCCGGG‑‑CGAGTTTCAGtt                                                                                                                                      >  5:106847/1‑149 (MQ=255)               cGATCATGCTCGAGCGTGCCGGGGTTGAGATTACCCATGGGTATGAAATCGTAGAGCTGGGTTAAGGCTGAGATTCCGGGGCCGCTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCA‑CCCGCGGCCCGGG‑‑CGAGTTTCAGTTgc                                                                                                                                    >  2:164628/1‑149 (MQ=255)                gATCATGCTCGAGCGTGCCGGGGTTGAGATTACCCATGGGTATGAAATCGTAGAGCTGGGTTAAGGCTGAGATTCCGGGGCCGCTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCA‑CCCGCGGCCCGGG‑‑CGAGTTTCAGTTgcg                                                                                                                                   >  6:328584/1‑149 (MQ=255)                gATCATGCTCGAGCGTGCCGGGGTTGAGATTACCCATGGGTATGAAATCGTAGAGCTGGGTTAAGGCTGAGATTCCGGGGCCGCTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCA‑CCCGCGGCCCGGG‑‑CGAGTTTCAGTTgcg                                                                                                                                   >  4:102578/1‑149 (MQ=255)                gATCATGCTCGAGCGTGCCGGGGTTGAGATTACCCATGGGTATGAAATCGTAGAGCTGGGTTAAGGCTGAGATTCCGGGGCCGCTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCA‑CCCGCGGCCCGGG‑‑CGAGTTTCAGTTgcg                                                                                                                                   >  6:11239/1‑149 (MQ=255)                       cTCGAGCGTGCCGGGGTTGAGATTACCCATGGGTATGAAATCGTAGAGCTGGGTTAAGGCTGAGATTCCGGGGCCGCTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCA‑CCCGCGGCCCGGG‑‑CGAGTTTCAGTTGCGCAGGGcc                                                                                                                            >  2:382320/1‑149 (MQ=255)                        tCGAGCGTGCCGGGGTTGAGATTACCCATGGGTATGAAATCGTAGAGCTGGGTTAAGGCTGAGATTCCGGGGCCGCTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCA‑CCCGCGGCCCGGG‑‑CGAGTTTCAGTTGCGCAGGGCCg                                                                                                                           >  8:212102/1‑149 (MQ=255)                          gAGCGTGCCGGGGTTGAGATTACCCATGGGTATGAAATCGTAGAGCTGGGTTAAGGCTGAGATTCCGGGGCCGCTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCA‑CCCGCGGCCCGGG‑‑CGAGTTTCAGTTGCGCAGGGCCgg                                                                                                                          >  4:186884/1‑148 (MQ=255)                              gTGCCGGGGTTGAGATTACCCATGGGTATGAAATCGGAGAGCTGGGTTAAGGCTGAGAGTCCGGGGCCGCTTTGCAGCCCGTGTGGAAGCGGGTGAACCCGCTCCCA‑CCCGCGGCCCGGG‑‑CGAGTTTCAGTTGCGCAGGGCCGGAAggg                                                                                                                     <  3:76315/149‑1 (MQ=255)                                 ccGGGGTTGAGATTACCCATGGGTATGAAATCGTAGAGCTGGGTTAAGGCTGAGATTCCGGGGCCGCTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCA‑CCCGCGGCCCGGG‑‑CGAGTTTCAGTTGCGCAGGGCCGGAAGGGCCa                                                                                                                  <  3:226370/149‑1 (MQ=255)                                   ggggTTGAGATTACCCATGGGTATGAAATCGTAGAGCTGGGTTAAGGCTGAGATTCCGGGGCCGCTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCACCCCGCGGCCCGGG‑‑CGAGTTTCAGTTGCGCAGGGCCGGAAGGGCCAt                                                                                                                 <  1:80530/149‑1 (MQ=255)                                      gTTGAGATTACCCATGGGTATGAAATCGTAGAGCTGGGTTAAGGCTGAGATTCCGGGGCCGCTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCA‑CCCGCGGCCCGGG‑‑CGAGTTTCAGTTGCGCAGGGCCGGAAGGGCCATCCg                                                                                                              >  5:177740/1‑148 (MQ=255)                                      gTTGAGATTACCCATGGGTATGAAATCGTAGAGCTGGGTTAAGGCTGAGATTCCGGGGCCGCTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCA‑CCCGCGGCCCGGG‑‑CGAGTTTCAGTTGCGCAGGGCCGGAAGGGCCATCCg                                                                                                              >  7:166513/1‑148 (MQ=255)                                      gTTGAGATTACCCATGGGTATGAAATCGTAGAGCTGGGTTAAGGCTGAGATTCCGGGGCCGCTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCACA‑CCCGCGGCCCGGG‑‑CGAGTTTCAGTTGCGCAGGGCCGGAAGGGCCATCCg                                                                                                              >  1:357390/1‑148 (MQ=255)                                         gagaTTACCCATGGGTATGAAATCGTAGAGCTGGGTTAAGGCTGAGATTCCGGGGCCGCTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCA‑CCCGCGGCCCGGG‑‑CGAGTTTCAGTTGCGCAGGGCCGGAAGGGCCATCCGCaa                                                                                                           <  6:165574/148‑1 (MQ=255)                                         gagaTTACCCATGGGTATGAAATCGTAGAGCTGGGTTAAGGCTGAGATTCCGGGGCCGCTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCA‑CCCGCGGCCCGGG‑‑CGAGTTTCAGTTGCGCAGGGCCGGAAGGGCCATCCGCa                                                                                                            <  4:280891/147‑1 (MQ=255)                                         gagaTTACCCATGGGTATGAAATCGTAGAGCTGGGTTAAGGCTGAGATTCCGGGGCCGCTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCA‑CCCGCGGCCCGGG‑‑CGAGTTTCAGTTGCGCAGGGCCGGAAGGGCCATCCGCa                                                                                                            >  3:280891/1‑147 (MQ=255)                                           gaTTACCCATGGGTATGAAATCGTAGAGCTGGGTTAAGGCTGAGATTCCGGGGCCGCTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCA‑CCCGCGGCCCGGG‑‑CGAGTTTCAGTTGCGCAGGGCCGGAAGGGCCATCCGCAACCa                                                                                                        >  3:354665/1‑149 (MQ=255)                                            aTTACCCATGGGTATGAAATCGTAGAGCTGGGTTAAGGCTGAGATTCCGGGGCCGCTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCA‑CCCGCGGCCCGGG‑‑CGAGTTTCAGTTGCGCAGGGCCGGAAGGGCCATCAGCAACCAt                                                                                                       >  2:148598/1‑149 (MQ=255)                                                cccATGGGTATGAAATCGTAGAGCTGGGTTAAGGCTGAGATTCCGGGGCCGCTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCA‑CCCGCGGCCCGGG‑‑CGAGTTTCAGTTGCGCAGGGCCGGAAGGGCCATCCGCAACCATTGc                                                                                                    <  6:124787/148‑1 (MQ=255)                                                cccATGGGTATGAAATCGTAGAGCTGGGTTAAGGCTGAGATTCCGGGGCCGCTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCA‑CCCGCGGCCCGGG‑‑CGAGTTTCAGTTGCGCAGGGCCGGAAGGGCCATCCGCAACCATTGc                                                                                                    <  6:130144/148‑1 (MQ=255)                                                cccATGGGTATGAAATCGTAGAGCTGGGTTAAGGCTGAGATTCCGGGGCCGCTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCA‑CCCGCGGCCCGGG‑‑CGAGTTTCAGTTGCGCAGGGCCGGAAGGGCCATCCGCAACCATTGc                                                                                                    <  8:268722/148‑1 (MQ=255)                                                cccATGGGTATGAAATCGTAGAGCTGGGTTAAGGCTGAGATTCCGGGGCCGCTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCA‑CCCGCGGCCCGGG‑‑CGAGTTTCAGTTGCGCAGGGCCGGAAGGGCCATCCGCAACCATTGCg                                                                                                   >  2:118570/1‑149 (MQ=255)                                                   aTGGGTATGAAATCGTAGAGCTGGGTTAAGGCTGAGATTCCGGGGCCGCTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCA‑CCCGCGGCCCGGG‑‑CGAGTTTCAGTTGCGCAGGGCCGGAAGGGCCATCCGCAACCATTGCGGaa                                                                                                <  1:164628/149‑1 (MQ=255)                                                      ggTATGAAATCGTAGAGCTGGGTTAAGGCTGAGATTCCGGGGCCGCTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCA‑CCCGCGGCCCGGG‑‑CGAGTTTCAGTTGCGCAGGGCCGGAAGGGCCATCCGCAACCATTGCGGAAGa                                                                                              <  2:189045/148‑1 (MQ=255)                                                       gTATGAAATCGTAGAGCTGGGTTAAGGCTGAGATTCCGGGGCCGCTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCA‑CCCGCGGCCCGGG‑‑CGAGTTTCAGTTGCGCAGGGCCGGAAGGGCCATCCGCAACCATTGCGGAAGACg                                                                                            <  3:186884/149‑1 (MQ=255)                                                         aTGAAATCGTAGAGCTGGGTTAAGGCTGAGATTCCGGGGCCGCTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCGCA‑CCGGGGGCCCGGGGAGGAATTTAAATTTGCCAGGGCCGGAAGGGCCAAACCCAACCAATGCGGaaacag                                                                                            >  1:125859/1‑145 (MQ=255)                                                             aaTCGTAGAGCTGGGTTAAGGCTGAGATTCCGGGGCCGCTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCA‑CCCGCGGCCCGGG‑‑CGAGTTTCAGTTGCGCAGGGCCGGAAGGGCCATCCGCAACCATTGCGGAAGACGGcttct                                                                                      <  5:11239/149‑1 (MQ=255)                                                                    gagCTGGGTTAAGGCTGAGATTCCGGGGCCGCTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCA‑CCCGCGGCCCGGG‑‑CGAGTTTCAGTTGCGCAGGGCCGGAAGGGCCATCCGCAACCATTGCGGAAGACGGCTTCTTAGCGcc                                                                               <  1:382320/149‑1 (MQ=255)                                                                    gagCTGGGTTAAGGCTGAGATTCCGGGGCCGCTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCA‑CCCGCGGCCCGGG‑‑CGAGTTTCAGTTGCGCAGGGCCGGAAGGGCCATCCGCAACCATTGCGGAAGACGGCTTCTTAGCGcc                                                                               >  2:232178/1‑149 (MQ=255)                                                                      gCTGGGTTAAGGCTGAGATTCCGGGGCCGCTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCA‑CCCGCGGCCCGGG‑‑CGAGTTTCAGTTGCGCAGGGCCGGAAGGGCCATCCGCAACCATTGCGGAAGACGGCTTCTTAGCGCCTg                                                                             >  3:14739/1‑149 (MQ=255)                                                                      gCTGGGTTAAGGCTGAGATTCCGGGGCCGCTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCA‑CCCGCGGCCCGGG‑‑CGAGTTTCAGTTGCGCAGGGCCGGAAGGGCCATCCGCAACCATTGCGGAAGACGGCTTCTTAGCGCCTg                                                                             >  8:123835/1‑149 (MQ=255)                                                                          ggTTAAGGCTGAGATTCCGGGGCCGCTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCA‑CCCGCGGCCCGGG‑‑CGAGTTTCAGTTGCGCAGGGCCGGAAGGGCCATCCGCCACCATTGCGGAAGACGGCTTCTTAGCGCCTGGCt                                                                          >  4:112041/1‑148 (MQ=255)                                                                                ggCTGAGATTCCGGGGCCGCTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCA‑CCCGCGGCCCGGG‑‑CGAGTTTCAGTTGCGCAGGGCCGGAAGGGCCATCCGCAACCATTGCGGAAGACGGCTTCTTAGCGCCTGGCTCAACCGc                                                                   <  8:166513/149‑1 (MQ=255)                                                                                   tGAGATTCCGGGGCCGCTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCA‑CCCGCGGCCCGGG‑‑CGAGTTTCAGTTGCGCAGGGCCAGAAGGGCCATCCGCAACCATTGCGGAAGACGGCTTCTTAGCGCCTGGCTCAACCGCTcc                                                                >  4:69877/1‑149 (MQ=255)                                                                                       aTTCCGGGGCCGCTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCA‑CCCGCGGCCCGGG‑‑CGAGTTTCAGTTGCGCAGGGCCGGAAGGGCCATCCGCAACCATTGCGGAAGACGGCTTCTTAGCGCCTGGCTCAACCGCTCCCGgc                                                            <  4:281916/149‑1 (MQ=255)                                                                                        tcgcccgggccgcgggtgggagcgggttcacccgcttccacaagggctgcaaagcggcccGGG‑‑CGAGTTTCAGTTGCGCAGGGCCGGAAGGGCCATCCGCAACCATTGCGGAAGACGGCTTCTTAGCGCCTGGCTCAACCGCTCCCGgc                                                            >  1:197559‑M2/61‑149 (MQ=255)                                                                                           cccgggccgcgggtgggagcgggttcacccgcttccacaagggctgcaaagcggcccGGG‑‑CGAGTTTCAGTTGCGCAGGGCCGGAAGGGCCATCCGCAACCATTGCGGAAGACGGCTTCTTAGCGCCTGGCTCAACCGCTCCCGGCGCt                                                         >  3:236208‑M2/58‑149 (MQ=255)                                                                                           cGGGGCCGCTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCA‑CCCGCGGCCCGGG‑‑CGAGTTTCAGTTGCGCAGGGCCGGAAGGGCCATCCGCAACCATTGCGGAAGACGGCTTCTTAGCGCCTGGCTCAACCGCTCCCGGCGCtt                                                        <  6:177740/149‑1 (MQ=255)                                                                                            ggggCCGCTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCA‑CCCGCGGCCCGGG‑‑CGAGTTTCAGTTGCGCAGGGCCGGAAGGGCCATCCGCAACCATTGCGGAAGACGGCTTCTTAGCGCCTGGCTCAACCGCTCCCGGCGCttt                                                       <  6:106847/149‑1 (MQ=255)                                                                                            ggggCCGCTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCA‑CCCGCGGCCCGGG‑‑CGAGTTTCAGTTGCGCAGGGCCAGAAGGGCCATCCGCAACCATTGCGGAAGACGGCTTCTTAGCGCCTGGCTCAACCGCTCCCGGCGCttt                                                       <  3:69877/149‑1 (MQ=255)                                                                                              gggccgcgggtgggagcgggttcacccgcttccacaagggctgcaaagcggcccGGG‑‑CGAGTTTCAGTTGCGCAGGGCCGGAAGGGCCATCCGCAACCATTGCGGAAGACGGCTTCTTAGCGCCTGGCTCAACCGCTCCCGGCGCtttt                                                      >  1:95684‑M2/55‑149 (MQ=255)                                                                                              GGCCGCTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCA‑CCCGCGGCCCGGG‑‑CGAGTTTCAGTTGCGCAGGGCCGGAAGGGCCATCCGCAACCATTGCGGAAGACGGCTTCTTAGCGCCTGGCTCAACCGCTCCCGGCGCTTTTg                                                     <  4:140665‑M1/149‑1 (MQ=255)                                                                                              GGCCGCTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCA‑CCCGCGGCCCGGG‑‑CGAGTTTCAGTTGCGCAGGGCCGGAAGGGCCATCCGCAACCATTGCGGAAGACGGCTTCTTAGCGCCTGGCTCAACCGCTCCCGGCGCTTTTg                                                     >  5:328584‑M1/1‑149 (MQ=255)                                                                                              GGCCGCTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCA‑CCCGCGGCCCGGG‑‑CGAGTTTCAGTTGCGCAGGGCCGGAAGGGCCATCCGCAACCATTGCGGAAGACGGCTTCTTAGCGCCTGGCTCAACCGCTCCCGGCGCTTTTg                                                     >  2:357390‑M1/1‑149 (MQ=255)                                                                                                CCGCTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCA‑CCCGCGGCCCGGG‑‑CGAGTTTCAGTTGCGCAGGGCCGGAAGGGCCATCCGCAACCATTGCGGAAGACGGCTTCTTAGCGCCTGGCTCAACCGCTCCCGGCGCTTTTgg                                                    <  4:133014‑M1/148‑1 (MQ=255)                                                                                                  GCTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCA‑CCCGCGGCCCGGG‑‑CGAGTTTCAGTTGCGCAGGGCCGGAAGGGCCATCCGCAACCATTGCGGAAGACGGCTTCTTAGCGCCTGGCTCAACCGCTCCCGGCGCTTTTGGTa                                                  <  6:7922‑M1/148‑1 (MQ=255)                                                                                                        cAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCA‑CCCGCGGCCCGGG‑‑CGAGTTTCAGTTGCGCAGGGCCGGAAGGGCCATCCGCAACCATTGCGGAAGACGGCTTCTTAGCGCCTGGCTCAACCGCTCCCGGCGCTTTTGGTAAACCAg                                            <  2:125859/148‑1 (MQ=255)                                                                                                          gCCCTTGTGGAAGCGGGTGAACCCGCTCCCA‑CCCGCGGCCCGGG‑‑CGAGTTTCAGTTGCTCAGGGCCGGAAGGGCCATCCGCAACCATTGCGGAAGACGGCTTCTTAGCGCCTGGCTCAACCGCTCCCGGAGCTTTTGGTAAACCAGGc                                          >  8:181293/1‑148 (MQ=255)                                                                                                          gCCCTTGTGGAAGCGGGTGAACCCGCTCCCA‑CCCGCGGCCCGGG‑‑CGAGTTTCAGTTGCGCAGGGCCGGAAGGGCCATCCGCAACCATTGCGGAAGACGGCTTCTTAGCGCCTGGCTCAACCGCTCCCGGCGCTTTTGGTAAACCAGGcc                                         <  1:118570/149‑1 (MQ=255)                                                                                                                gtgGAAGCGGGTGAACCCGCTCCCA‑CCCGCGGCCCGGG‑‑CGAGTTTCAGTTGCGCAGGGCCGGAAGGGCCATCCGCAACCATTGCGGAAGACGGCTTCTTAGCGCCTGGCTCAACCGCTCCCGGCGCTTTTGGTAAACCAGGCCAAGc                                     <  3:133014/147‑1 (MQ=255)                                                                                                                gtgGAAGCGGGTGAACCCGCTCCCA‑CCCGCGGCCCGGG‑‑CGAGTTTCAGTTGCGCAGGGCCGGAAGGGCCATCCGCAACCATTGCGGAAGACGGCCTCTTAGCGCCTGGCTCAACCGCTCCCGGCGCTTTTGGTAAACCAGGCCAAGcc                                    <  3:102578/148‑1 (MQ=255)                                                                                                                 tgGAAGCGGGTGAACCCGCTCCCA‑CCCGCGGCCCGGG‑‑CGAGTTTCAGTTGCGCAGGGCCGGAAGGGCCATCCGCAACCATTGCGGAAGACGGCTTCTTAGCGCCTGGCTCAACCGCTCCCGGCGCTTTTGGTAAACCAGGCCAAGcc                                    <  2:310702/147‑1 (MQ=255)                                                                                                                   gAAGCGGGTGAACCCGCTCCCA‑CCCGCGGCCCGGG‑‑CGAGTTTCAGTTgcgc                                                                                                                                  >  5:270555/1‑51 (MQ=255)                                                                                                                   gAAGCGGGTGAACCCGCTCCCA‑CCCGCGGCCCGGG‑‑CGAGTTTCAGTTgcgc                                                                                                                                  <  6:270555/51‑1 (MQ=255)                                                                                                                   gAAGCGGGTGAACCCGCTCCCA‑CCCGCGGCCCGGG‑‑CGAGTTTCAGTTGCGCAGGGCCGGAAGGGCCATCCGCAACCATTGCGGAAGACGGCTTCTTAGCGCCTGGCTCAACCGCTCCCGgcgc                                                          >  1:93337/1‑123 (MQ=255)                                                                                                                   gAAGCGGGTGAACCCGCTCCCA‑CCCGCGGCCCGGG‑‑CGAGTTTCAGTTGCGCAGGGCCGGAAGGGCCATCCGCAACCATTGCGGAAGACGGCTTCTTAGCGCCTGGCTCAACCGCTCCCGgcgc                                                          <  2:93337/123‑1 (MQ=255)                                                                                                                   gAAGCGGGTGAACCCGCTCCCA‑CCCGCGGCCCGGG‑‑CGAGTTTCAGTTGCGCAGGGCCGGAAGGGCCATCCGCAACCATTGCGGAAGACGGCTTCTTAGCGCCTGGCTCAACCGCTCCCGGCGCTTTTGGTAAACCAGGCCAAGCCAGa                                 >  5:254910/1‑148 (MQ=255)                                                                                                                     acccgcttccacaagggctgcaaagcggcccGGG‑‑CGAGTTTCAGTTGCGCAGGGCCGGAAGGGCCATCCGCAACCATTGCGGAAGACGGCTTCTTAGCGCCTGGCTCAACCGCTCCCGGCGCTTTTGGTAAACCAGGCCAAGCCAGAt                                <  4:236208‑M2/117‑1 (MQ=255)                                                                                                                       cGGGTGAACCCGCTCCCA‑CCCGCGGCCCGGG‑‑CGAGTTTCAGTTGCGCAGGGCCGGAAGGGCCATCCGCAACCATTGCGGAAGACGGCTTCTTAGCGCCTGGCTCAACCGCTCCCGGCGCTTTTGGTAAACCAGGCCAAGCCAGATAAcc                            <  1:232178/149‑1 (MQ=255)                                                                                                                        gggTGAACCCGCTCCCA‑CCCGCGGCCCGGG‑‑CGAGTTTCAGTTGCGCAGGGCCGGAAGGGCCATCCGCAACCATTGCGGAAGACGGCTTCTTAGCGCCTGGCTCAACCGCTCCCGGCGCTTTTGGTAAACCAGGCCAAGCCAGATAAccc                           >  7:346317/1‑149 (MQ=255)                                                                                                                            gAACCCGCTCCCA‑CCCGCGGCCCGGG‑‑CGAGTTTCAGTTGCGCAGGGCCGGAAGGGCCATCCGCAACCATTGCGGAAGACGGCTTCTTAGCGCCTGGCTCAACCGCTCCCGGCGCTTTTGGTAAACCAGGCCACGCCAGATAACCCCCAg                       >  2:330014/1‑149 (MQ=255)                                                                                                                                ccGCTCCCA‑CCCGCGGCCCGGG‑‑CGAGTTTCAGTTGCGCAGGGCCGGAAGGGCCATCCGCAACCATTGCGGAAGACGGCTTCTTAGCGCCTGGCTCAACCGCTCCCGGCGCTTTTGGTAAACCAGGCCAAGCCAGATAACCCCCAGc                      >  3:195309/1‑146 (MQ=255)                                                                                                                                ccGCTCCCA‑CCCGCGGCCCGGG‑‑CGAGTTTCAGTTGCGCAGGGCCGGAAGGGCCATCCGCAACCATTGCGGAAGACGGCTTCTTAGCGCCTGGCTCAACCGCTCCCGGCGCTTTTGGTAAACCAGGCCAAGCCAGATAACCCCCAGc                      <  4:195309/146‑1 (MQ=255)                                                                                                                                 cGCTCCCA‑CCCGCGGCCCGGG‑‑CGAGTTTCAGTTGCGCAGGGCCGGAAGGGCCATCCGCAACCATTGCGGAAGACGGCTTCTTAGCGCCTGGCTCAACCGCTCCCGGCGCTTTTGGTAATCCAGGCCAAGCCAGATAACCCCCAGCCCGa                  >  3:273172/1‑149 (MQ=255)                                                                                                                                    tCCCA‑CCCGCGGCCCGGG‑‑CGAGTTTCAGTTGCGCAGGGCCGGAAGGGCCATCCGCAACCATTGCGGAAGACGGCTTCTTAGCGCCTGGCTCAACCGCTCCCGGCGCTTTTGGTAAACCAGGCCAAGCCAGATAACCCCCAGCCCGATCa               >  1:262865/1‑149 (MQ=255)                                                                                                                                    tCCCA‑CCCGCGGCCCGGG‑‑CGAGTTTCAGTTGCGCAGGGCCGGAAGGGCCATCCGCAACCATTGCGGAAGACGGCTTCTTAGCGCCTGGCTCAACCGCTCCCGGCGCTTTTGGTAAACCAGGCCAAGCCAGATAACCCCCAGCCCGATCa               >  7:142736/1‑149 (MQ=255)                                                                                                                                      ccA‑CCCGCGGCCCGGG‑‑CGAGTTTCAGTTGCGCAGGGCCGGAAGGGCCATCCGCAACCATTGCGGAAGACGGCTTCTTAGCGCCTGGCTCAACCGCTCCCGGCGCTTTTGGTAAACCAGGCCAAGCCAGATAACCCCCAGCCCGATCATg             >  3:244069/1‑149 (MQ=255)                                                                                                                                      ccA‑CCCGCGGCCCGGG‑‑CGAGTTTCAGTTGCGCAGGGCCGGAAGGGCCATCCGCAACCATTGCGGAAGACGGCTTCTTAGCGCCTGGCTCAACCGCTCCCGGCGCTTTTGGTAAACCAGGCCAAGCCAGATAACCCCCAGCCCGATCATg             <  2:262865/149‑1 (MQ=255)                                                                                                                                       cA‑CCCGCGGCCCGGG‑‑CGAGTTTCAGTTGCGCAGGGCCGGAAGGGCCATCCGCAACCATTGCGGAAGACGGCTTCTTAGCGCCTGGCTCAACCGCTCCCGGCGCTTTTg                                                     <  2:371551/108‑1 (MQ=255)                                                                                                                                       cA‑CCCGCGGCCCGGG‑‑CGAGTTTCAGTTGCGCAGGGCCGGAAGGGCCATCCGCAACCATTGCGGAAGACGGCTTCTTAGCGCCTGGCTCAACCGCTCCCGGCGCTTTTg                                                     >  1:371551/1‑108 (MQ=255)                                                                                                                                        a‑CCCGCGGCCCGGG‑‑CGAGTTTCAGTTGCGCAGGGCCGGAAGGGCCATCCGCAACCATTGCGGAAGACGGCTTCTTAGCGCCTGGCTCAACCGCTCCCGGCGCTTTTGGTAAACCAGGCCAAGCCAGATAACCCCCAGCCCGATCATGGt           >  8:236358/1‑149 (MQ=255)                                                                                                                                           aagcggcccGGG‑‑CGAGTTTCAGTTGCGCAGGGCCGGAAGGGCCATCCGCAACCATTGCGGAAGACGGCTTCTTAGCGCCTGGCTCAACCGCTCCCGGCGCTTTTGGTAAACCAGGCCAAGCCAGATAACCCCCAGCCCGATCATGGTCa         <  2:95684‑M2/140‑1 (MQ=255)                                                                                                                                              cggcccGGG‑‑CGAGTTTCAGTTGCGCAGGGCCGGAAGGGCCATCCGCAACCATTGCGGAAGACGGCTTCTTAGCGCCTGGCTCAACCGCTCCCGGCGCTTTTGGTAAACCAGGCCAAGCCAGATAACCCCCAGCCCGATCATGGTCAGca      <  1:148598‑M2/143‑1 (MQ=255)                                                                                                                                                  ccGGG‑‑CGAGTTTCAGTTGCGCAGGGCCGGAAGGGCCATCCGCAACCATTGCGGAAGACGGCTTCTTAGCGCCTGGCTCAACCGCTCCCGGCGCTTTTGGTAAACCAGGCCAAGCCAGATAACCCCCAGCCCGATCATGGTCAGcaccac  >  8:169845‑M2/3‑149 (MQ=255)                                                                                                                                                    |                                                                                                                                                     GTATTGCTCGGCTTCGATCATGCTCGAGCGTGCCGGGGTTGAGATTACCCATGGGTATGAAATCGTAGAGCTGGGTTAAGGCTGAGATTCCGGGGCCGCTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCA‑CCCGCGGCCCGGG‑‑CGAGTTTCAGTTGCGCAGGGCCGGAAGGGCCATCCGCAACCATTGCGGAAGACGGCTTCTTAGCGCCTGGCTCAACCGCTCCCGGCGCTTTTGGTAAACCAGGCCAAGCCAGATAACCCCCAGCCCGATCATGGTCAGCACCAC  >  NC_002947/513888‑514180

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.