New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1006304	51 (0.820)	3 (0.050)	3/254	NT	6.0%	coding (1234/2430 nt)	PP_0867	FecA‑like outer membrane receptor
	?	NC_002947	= 1006326	46 (0.780)					coding (1256/2430 nt)	PP_0867	FecA‑like outer membrane receptor

AACCCGTACCAGTCGCTGCGCGATTACGACTACTTCGCGGGCCGGCGCAAGGATGTGTCGTTCAAATGGCAGCGGCAGCTCGACGATGCCACCCAGTTCGAAGTGCTGACCTACTACACCGACAGCTTCCGCGGCAGCACAATAGCCTCGCGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1006151‑1006304 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcgggTACGACGACAACGTCTTCATGTCCCGCGAGG  <  NC_002947/1006326‑1006296                                                                                                                                                                                           AACCCGTACCAGTCGCTGCGCGATTACGACTACTTCGCGGGCCGACGCAAGGATGTGTCGTTCAAATGGCAGCGGCAGCTCGACGATGCCACCCAGTTCGAAGTGCTGACCTACTACACCGACAGCTTCCGCGGCAGCACAATAGCCTC                                      <  7:177770/149‑1    CCGTACCAGTCGCTGCGCGATTACGACTACTTCGCGGGCCGGCGCAAGGATGTGTCGTTCAAATGGCAGCGGCAGCTCGACGATGCCACCCAGTTCGAAGTGCTGACCTACTACACCGACAGCTTCCGCGGCAGCACAATAGCCTCGCG                                   >  8:182440/1‑149      GTACCAGTCGCTGCGCGATTACGACTACTTCGCGGGCCGGCGCAAGGATGTGTCGTTCAAATGGCAGCGGCAGCTCGACGATGCCACCCAGTTCGAAGTGCTGACCTACTACACCGACAGCTTCCGCGGCAGCACAATAGCCTCGCGGG                                 <  7:141287/149‑1                                                                     GCAGCGGCAGCTCGACGATGCCACCCAGTTCGAAGTGCTGACCTACTACACCGACAGCTTCCGCGGCAGCACAATAGCCTCGCGGGTACGACGACAACGTCTTCATGTCCCGCGAGG  <  4:79968/117‑1                                                                                          CACCCAGTTCGAAGTGCTGACCTACTACACCGACAGCTTCCGCGGCAGCACAATAGCCTCGCGGGTACGACGACAACGTCTTCATGTCCCGCGAG   <  1:71828/95‑1                                                                                          CACCCAGTTCGAAGTGCTGACCTACTACACCGACAGCTTCCGCGGCAGCACAATAGCCTCGCGGGTACGACGACAACGTCTTCATGTCCCGCGAG   >  2:71828/1‑95                                                                                                                                                                                           AACCCGTACCAGTCGCTGCGCGATTACGACTACTTCGCGGGCCGGCGCAAGGATGTGTCGTTCAAATGGCAGCGGCAGCTCGACGATGCCACCCAGTTCGAAGTGCTGACCTACTACACCGACAGCTTCCGCGGCAGCACAATAGCCTCGCGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1006151‑1006304 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcgggTACGACGACAACGTCTTCATGTCCCGCGAGG  <  NC_002947/1006326‑1006296

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.