New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1006304	51 (0.820)	3 (0.050)	3/254	NT	6.0%	coding (1234/2430 nt)	PP_0867	FecA‑like outer membrane receptor
	?	NC_002947	= 1006326	46 (0.780)					coding (1256/2430 nt)	PP_0867	FecA‑like outer membrane receptor

GACTACTTCGCGGGCCGGCGCAAGGATGTGTCGTTCAAATGGCAGCGGCAGCTCGACGATGCCACCCAGTTCGAAGTGCTGACCTACTACACCGACAGCTTCCGCGGCAGCACAATAGCCTCGCGGGACATGAAGACGTTGTCGTCGT‑ACCCGCGCAACTACCACACCTTCGCCATTGAACCCCGTGTGTCGCGCATCTTC‑TTTGCCGGCCCAACCACCCAGGAAGTCAGTG‑TCGGTTACCGTTACCTGAAGGAAGCGATGCGCGAACAGTCGACTCGCCTGGCGCTGATCGA  >  NC_002947/1006178‑1006470                                                                                                                                                      |                                                                                                                                                   gACTACTTCGCGGGCCGGCGCAAGGATGTGTCGTTCAAATGGCAGCGGCAGCTCGACGATGCCACCCAGTTCGAAGTGCTGACCTACTACACCGACAGCTTCCGCGGCAGCACAATAGCCTCGCGGGACATGAAGACGTTGTCGTCGT‑a                                                                                                                                                    >  2:148080/1‑149 (MQ=255) gACTACTTCGCGGGCCGGCGCAAGGATGTGTCGTTCAAATGGCAGCGGCAGCTCGACGATGCCACCCAGTTCGAAGTGCTGACCTACTACACCGACAGCTTCCGCGGCAGCACAATAGCCTCGCGGGACATGAAGACGTTGTCGTCGT‑a                                                                                                                                                    >  4:220134/1‑149 (MQ=255)         cgcgGGCCGGCGCAAGGATGTGTCGTTCAAATGGCAGCGGCAGCTCGACGATGCCACCCAGTTCGAAGTGCTGACCTACTACACCGACAGCTTCCGCGGCAGCACAATAGCCTCGCGGGACATGAAGACGTTGTCGTCGT‑ACCCgcgc                                                                                                                                             >  2:202464/1‑148 (MQ=255)          gcgGGCCGGCGCAAGGATGTGTCGTTCAAATGGCAGCGGCAGCTCGACGATGCCACCCAGTTCGAAGTGCTGACCTACTACACCGACAGCTTCCGCGGCAGCACAATAGCCTCGCGGGACATGAAGACGTTGTCGTCGT‑ACCCGCGCa                                                                                                                                            <  7:182440/148‑1 (MQ=255)              gCCGGCGCAAGGATGTGTCGTTCAAATGGCAGCGGCAGCTCGACGATGCCACCCAGTTCGAAGTGCTGACCTACTACACCGACAGCTTCCGCGGCAGCACAATAGCCTCGCGGGACATGAAGACGTTGTCGTCGT‑ACCCGCGCAACTAc                                                                                                                                       >  2:7430/1‑149 (MQ=255)                  gcgcAAGGATGTGTCGTTCAAATGGCAGCGGCAGCTCGACGATGCCACCCAGTTCGAAGTGCTGACCTACTACACCGACAGCTTCCGCGGCAGCACAATAGCCTCGCGGGACATGAAGACGTTGTCGTCGT‑ACCCGCGCAACTACcaca                                                                                                                                   <  5:160184/149‑1 (MQ=255)                    gcAAGGATGTGTCGTTCAAATGGCAGCGGCAGCTCGACGATGCCACCCAGTTCGAAGTGCTGACCTACTACACCGACAGCTTCCGAGGCAGCACAATAGCCTCGCGGGACATGAAGACGTTGTCGTCGT‑ACCCGCGCAACTACCACAcc                                                                                                                                 >  7:282084/1‑149 (MQ=255)                      aaGGATGTGTCGTTCAAATGGCAGCGGCAGCTCGACGATGCCACCCAGTTCGAAGTGCTGACCTACTACACCGACAGCTTCCGCGGCAGCACAATAGCCTCGCGGGACATGAAGACGTTGTCGTCGT‑ACCCGCGCAACTACCACACCtt                                                                                                                               <  1:335228/149‑1 (MQ=255)                             tgtCGTTCAAATGGCAGCGGCAGCTCGACGATGCCACCCAGTTCGAAGTGCTGACCTACTACACCGACAGCTTCCGCGGCAGCACAATAGCCTCGCGGGACATGAAGACGTTGTCGTCGT‑ACCCGCGCAACTACCACACCTTCGCCAtt                                                                                                                        <  1:7430/149‑1 (MQ=255)                             tgtCGTTCAAATGGCAGCGGCAGCTCGACGATGCCACCCAGTTCGAAGTGCTGACCTACTACACCGACAGCTTCCGCGGCAGCACAATAGCCTCGCGGGACATGAAGACGTTGTCGTCGT‑ACCCGCGCAACTACCACACCTTCGCCAt                                                                                                                         <  6:104940/148‑1 (MQ=255)                                 gTTCAAATGGCAGCGGCAGCTCGACGATGCCACCCAGTTCGAAGTGCTGACCTACTACACCGACAGCTTCCGCGGCAGCACAATAGCCTCGCGGGACATGAAGACGTTGTCGTCGT‑ANCCGCGCAACTACCACACCTTCGCCATTGaa                                                                                                                     <  1:36675/148‑1 (MQ=255)                                 gTTCAAATGGCAGCGGCAGCTCGACGATGCCACCCAGTTCGAAGTGCTGACCTACTACACCGACAGCTTCCGCGGCAGCACAATAGCCTCGCGGGACATGAAGACGTTGTCGTCGT‑ACCCGCGCAACTACCACACCTTCGCCATTGAAc                                                                                                                    <  1:148080/149‑1 (MQ=255)                                  ttCAAATGGCAGCGGCAGCTCGACGATGCCACCCAGTTCGAAGTGCTGACCTACTACACCGACAGCTTCCGCGGCAGCACAATAGCCTCGCGGGACATGAAGACGTTGTCGTCGT‑ACCCGCGCAACTACCACACCTTCGCCATTGAAcc                                                                                                                   >  1:306633/1‑149 (MQ=255)                                  ttCAAATGGCAGCGGCAGCTCGACGATGCCACCCAGTTCGAAGTGCTGACCTACTACACCGACAGCTTCCGCGGCAGCACAATAGCCTCGCGGGACATGAAGACGTTGTCGTCGT‑ACCCGCGCAACTACCACACCTTCGCCATTGAAcc                                                                                                                   >  6:204744/1‑149 (MQ=255)                                      aaTGGCAGCGGCAGCTCGACGATGCCACCCAGTTCGAAGTGCTGACCTACTACACCGACAGCTTCCGCGGCAGCACAATAGCCTCGCGGGACATGAAGACGTTGCCGTCGT‑ACCCGCGCAACTACcac                                                                                                                                    >  3:374082/1‑128 (MQ=255)                                      aaTGGCAGCGGCAGCTCGACGATGCCACCCAGTTCGAAGTGCTGACCTACTACACCGACAGCTTCCGCGGCAGCACAATAGCCTCGCGGGACATGAAGACGTTGCCGTCGT‑ACCCGCGCAACTACcac                                                                                                                                    <  4:374082/128‑1 (MQ=255)                                         ggcagcggcagcTCGACGATGCCACCCAGTTCGAAGTGCTGACCTACTACACCGACAGCTTCCGCGGCAGCACAATAGCCTCGCGGGACATGAAGACGTTGTCGTCGT‑ACCCGCGCAACTACCACACCTTCGCCATTGAACCCCgtgtg                                                                                                            >  3:273322/1‑149 (MQ=255)                                                   gcTCGACGATGCCACCCAGTTCGAAGTGCTGACCTACTACACCGACAGCTTCCGCGGCAGCACAATAGCCTCGCGGGACATGAAGACGTTGTCGTCGT‑ACCCGCGCAACTACCACACCTTCGCCATTGAACCCCGTGTGTCGCGCAtct                                                                                                  <  5:169142/149‑1 (MQ=255)                                                    cTCGACGATGCCACCCAGTTCGAAGTGCTGACCTACTACACCGACAGCTTCCGCGGCAGCACAATAGCCTCGCGGGACATGAAGACGTTGTCGTCGT‑ACCCGCGCAACTACCACACCTTCGCCATTGAACCCCGTGTGTCGCGCAtctt                                                                                                 >  5:334619/1‑149 (MQ=255)                                                        acgaTGCCACCCAGTTCGAAGTGCTGACCTACTACACCGACAGCTTCCGCGGCAGCACAATAGCCTCGCGGGACATGAAGACGTTGTCGTCGT‑ACCCGCGCAACTACCACACCTTCGCCATTGAACCCCGTGTGTCGCGCATCTTC‑ttt                                                                                            <  3:220134/149‑1 (MQ=255)                                                         cgaTGCCACCCAGTTCGAAGTGCTGACCTACTACACCGACAGCTTCCGCGGCAGCACAATAGCCTCGCGGGACATGAAGACGTTGTCGTCGT‑ACCCGCGCAACTACCACACCTTCGCCATTGAACCCCGTGTGTCGCGCATCTTC‑TTTg                                                                                           <  5:204744/149‑1 (MQ=255)                                                           aTGCCACCCAGTTCGAAGTGCTGACCTACTACACCGACAGCTTCCGCGGCAGCACAATAGCCTCGCGGGACATGAAGACGTTGTCGTCGTCACCCGCGCAACTACCACACCTTCGCCATTGAACCCCGTGTGTCGCGCATCTTC‑TTTGc                                                                                          <  1:305564/149‑1 (MQ=255)                                                                aCCCAGTTCGAAGTGCTGACCTACTACACCGACAGCTTCCGCGGCAGCACAATAGCCTCGCGGGACATGAAGACGTTGTCGTCGT‑ACCCGCGCAACTACCACACCTTCGCCATTGAACCCCGTGTGTCGCGCATCTTC‑TTTGCCGGcc                                                                                     >  6:142533/1‑148 (MQ=255)                                                                aCCCAGTTCGAAGTGCTGACCTACTACACCGACAGCTTCCGCGGCAGCACAATAGCCTCGCGGGACATGAAGACGTTGTCGTCGT‑ACCCGCGCAACTACCACACCTTCGCCATTGAACCCCGTGTGTCGCGCATCTTC‑TTTGCCGGcc                                                                                     >  1:357239/1‑148 (MQ=255)                                                                  ccAGTTCGAAGTGCTGACCTACTACACCGACAGCTTCCGCGGCAGCACAATAGCCTCGCGGGACATGAAGACGTTGTCGTCGT‑ACCCGCGCAACTACCACACCTTCGCCATTGAACCCCGTGTGTCGCGCATCTTC‑TTTGCCGGCCCaa                                                                                  >  2:184867/1‑149 (MQ=255)                                                                     gTTCGAAGTGCTGACCTACTACACCGACAGCTTCCGCGGCAGCACAATAGCCTCGCGGGACATGAAGACGTTGTCGTCGT‑ACCCGCGCAACTACCACACCTTCGCCATTGAACCCCGTGTGTCGCGCATCTTC‑TTTGCCGGCCCAacca                                                                               >  4:266253/1‑149 (MQ=255)                                                                          aaGTGCTGACCTACTACACCGACAGCTTCCGCGGCAGCACAATAGCCTCGCGGGACATGAAGACGTTGTCGTCGT‑ACCCGCGCAACTACCACACCTTCGCCATTGAACCCCGTGTGTCGCGCATCTTC‑TTTGCCGGCCCAACCACCCAg                                                                          <  4:273322/149‑1 (MQ=255)                                                                            gTGCTGACCTACTACACCGACAGCTTCCGCGGCAGCACAATAGCCTCGCGGGACATGAAGACGTTGTCGTCGT‑ACCCGCGCAACTACCACACCTTCGCCATTGAACCCCGTGTGTCGCGCATCTTC‑TTTGCCGGCCCAACCACCCAgg                                                                         >  5:87899/1‑148 (MQ=255)                                                                                  aCCTACTACACCGACAGCTTCCGCGGCAGCACAATAGCCTCGCGGGACATGAAGACGTTGTCGTCGT‑ACCCGCGCAACTACCACACCTTCGCCATTGAACCCCGTGTGTCGCGCATCTTCTTTTGCCGGCCCAACCACCCAGGAAGt                                                                     <  1:202464/147‑1 (MQ=255)                                                                                  aCCTACTACACCGACAGCTTCCGCGGCAGCACAATAGCCTCGCGGGACATGAAGACGTTGTCGTCGT‑ACCCGCGCAACTACCACACCTTCGCCATTGAACCCCGTGTGTCGCGCATCTTC‑TTTGCCGGCCCAACCACCCAGGAAGTCa                                                                   <  1:184867/148‑1 (MQ=255)                                                                                    ctactaCACCGACAGCTTCCGCGGCAGCACAATAGCCTCGCGGGACATGAAGACGTTGTCGTCGT‑ACCCGCGCAACTACCACACCTTCGCCATTGAACCCCGTGTGTcgcg                                                                                                       >  1:154209/1‑111 (MQ=255)                                                                                    ctactaCACCGACAGCTTCCGCGGCAGCACAATAGCCTCGCGGGACATGAAGACGTTGTCGTCGT‑ACCCGCGCAACTACCACACCTTCGCCATTGAACCCCGTGTGTcgcg                                                                                                       <  2:154209/111‑1 (MQ=255)                                                                                       ctacACCGACAGCTTCCGCGGCAGCACAATAGCCTCGCGGGACATGAAGACGTTGTCGTCGT‑ACCCGCGCAACTACCACACCTTCGCCATTGAACCCCGTGTGTCGCGCATCTTC‑TTTGCCGGCCCAACCACCCAGGAAGTCAgtg‑t                                                              <  2:357239/147‑1 (MQ=255)                                                                                          cacCGACAGCTTCCGCGGCATCACAATAGCCTCGCGGGACATGAAGACGTTGTCGTCGT‑ACCCGCGCAACTACCACACCTTCGCCATTGTACCGCGTGTGTCGCGCATCTTC‑TTTGCCGGCCCAACCACCCAGGAAGTCAGTG‑TCgg                                                           <  8:282084/147‑1 (MQ=255)                                                                                          cacCGACAGCTTCCGCGGCAGCACAATAGCCTCGCGGGACATGAAGACGTTGTCGTCGT‑ACCCGCGCAACTACCACACCTTCGACATTGAACCCCGTGTGTCGCGCATCTTC‑TTTGCCGGCCCAACCACCCAGGAAGTCAGTG‑TCGgt                                                          >  2:83312/1‑148 (MQ=255)                                                                                             cGACAGCTTCCGCGGCAGCACAATAGCCTCGCGGGACATGAAGACGTTGTCGTCGT‑ACCCGCGCAACTACCACACCTTCGCCATTGAACCCCGTGTGTCGCGCATCTTC‑TTTGCCGGCCCAACCACCCAGGAAGTCAGTG‑TCGgttacc                                                      >  7:139295/1‑149 (MQ=255)                                                                                                cAGCTTCCGCGGCAGCACAATAGCCTCGCGGGACATGAAGACGTTGTCGTCGT‑ACCCGCGCAACTACCACACCTTCGCCATTGAACCCCGTGTGTCGCGCATCTTC‑TTTGCCGGCCCAACCACCCAGGAAGTCAGTG‑TCGgttaccgtt                                                   <  6:334619/149‑1 (MQ=255)                                                                                                    ttCCGCGGCAGCACAATAGCCTCGCGGGACATGAAGACGTTGTCGTCGT‑ACCCGCGCAACTACCACACCTTCGCCATTGAACCCCGTGTGTCGCGCATCTTC‑TTTGCCGGCCCAACCACCCAGGAAGTCAGTG‑TCGgttaccgttaccg                                               >  4:116577/1‑148 (MQ=255)                                                                                                    ttCCGCGGCAGCACAATAGCCTCGCGGGACATGAAGACGTTGTCGTCGT‑ACCCGCGCAACTACCACACCTTCGCCATTGAACCCCGTGTGTCGCGCATCTTC‑TTTGCCGGCCCAACCACCCAGGAAGTCAGTG‑TCGGTTACCGTTACCt                                               >  3:161835/1‑149 (MQ=255)                                                                                                            cagcaCAATAGCCTCGCGGGACATGAAGACGTTGTCGTCGT‑ACCCGCGCAACTACCACACCTTCGCCATTGAACCCCGTGTGTCGCGCATCTTC‑TTTGCCGGCCCAACCACCCAGGAAGTCAGTG‑TCGGTTACCGTTACCTgaaggaag                                       >  1:225214/1‑149 (MQ=255)                                                                                                            cagcaCAATAGCCTCGCGGGACATGAAGACGTTGTCGTCGT‑ACCCGCGCAACTACCACACCTTCGCCATTGAACCCCGTGTGTCGCGCATCTTC‑TTTGCCGGCCCAACCACCCAGGAAGTCAGTG‑TCGGTTACCGTTACCTgaaggaag                                       <  2:306633/149‑1 (MQ=255)                                                                                                                   aTAGCCTCGCGGGACATGAAGACGTTGTCGTCGT‑ACCCGCGCAACTACCACACCTTCGCCATTGAACCCCGTGTGTCGCGCATCTTC‑TTTGCCGGCCCAACCACCCAGGAAGTCAGTG‑TCGGTTACCGTTACCTGAAGGAAGCGATgcg                                <  1:83312/149‑1 (MQ=255)                                                                                                                       ccTCGCGGGACATGAAGACGTTGTCGTCGT‑Acccgcgaggctattgtgctgccgcggaagctgtcggtgtagtaggtcagcacttcgaactgggtggcatcgtcgagctgccgctgc                                                              <  4:79968‑M2/117‑87 (MQ=255)                                                                                                                       ccTCGCGGGACATGAAGACGTTGTCGTCGT‑ACCCGCGCAACTACCACACCTTCGCCATTGAACCCCGTGTGTCGCGCATCTTC‑TTTGCCGGCCCAACCACCCAGGAAGTCAGTG‑TCGGTTACCGTTACCTGAAGGAAGCGATGCGCGaa                            >  4:235181/1‑149 (MQ=255)                                                                                                                       ccTCGCCGGACATGAAGACGTTGTCGTCGT‑ACCCGCGCAACTACCACACCTTCGCCATTGAACCCCGTCTGTCGCCCAGCTTC‑TTTGCCGGCCCAACCACCCAGGAAGTCAGTC‑ACGGATACCGTTACATCAAGGAAGCGATGCGCGaa                            >  5:80662/1‑149 (MQ=255)                                                                                                                        cTCGCGGGACATGAAGACGTTGTCGTCGT‑Acccgcgaggctattgtgctgccgcggaagctgtcggtgtagtaggtcagcacttcgaactgggtg                                                                                   <  1:71828‑M2/95‑66 (MQ=255)                                                                                                                        cTCGCGGGACATGAAGACGTTGTCGTCGT‑Acccgcgaggctattgtgctgccgcggaagctgtcggtgtagtaggtcagcacttcgaactgggtg                                                                                   >  2:71828‑M2/1‑30 (MQ=255)                                                                                                                         tCGCGGGACATGAAGACGTTGTCGTCGT‑ACCCGCGCAACTACCACACCTTCGCCATTGAACCCCGTGTGTCGCGCATCTTC‑TTTGCCGGCCCAACCACCCAGGAAGTCAGTG‑TCGGTTACCGTTACCTGAAGGAAGCGATGCGCGAACa                          >  4:197316/1‑149 (MQ=255)                                                                                                                           gcgGGACATGAAGACGTTGTCGTCGT‑ACCCGCGCAACTACCACACCTTCGCCATTGAACCCCGTGTGTCGCGCATCTTC‑TTTGCCGGCCCAACCACCCAGGAAGTCAGTG‑TCGGTTACCGTTACCTGAAGGAAGCGATGCGCGAACAg                         <  2:294914/148‑1 (MQ=255)                                                                                                                              ggACATGAAGACGTTGTCGTCGT‑ACCCGCGCAACTACCACACCTTCGCCATTGAACCCCGTGTGTCGCGCATCTTC‑TTTGCCGGCCCAACCACCCAGGAAGTCAGTG‑TCGGTTACCGTTACCTGAAGGAAGCCATgcg                                >  1:152706/1‑138 (MQ=255)                                                                                                                                   tGAAGACGTTGTCGTCGT‑ACGCGCGCAACTACGACACCTTCGGCATTGATACCCGTGTGTCGCGCATCTTG‑TTTGCCGGCCCAACGACGCTGGATGTCAGTG‑TCGGTTACCGTTACCTGAAGGAAGCGATGCGCGAACAGTCGACTCGc                <  6:80662/149‑1 (MQ=255)                                                                                                                                         cGTTGTCGTCGT‑ACCCGCGCAACTACCACACCTTCGCCATTGAACCCCGTGTGTCGCGCATCTTC‑TTTGCCGGCCCAACCACCCAGGAAGTCAGTG‑TCGGTTACCGTTACCTGAAGGAAGCGATGCGCGAACAGTCGACTCGCCTGgcg          <  6:87899/149‑1 (MQ=255)                                                                                                                                                gtcgt‑ACCCGCGCAACTACCACACCTTCGCCATTGAACCCCGTGTGTCGCGCATCTTC‑TTTTCCGGCCCAACCACCCAGGAAGTCATTGTTCCGTTACCGTTACCTGAAGGAAGCGATGCGCGAACAGTCGACTCGCCTGGCGCTGATc    <  1:107084/149‑1 (MQ=255)                                                                                                                                                 tcgt‑ACCCGCGCAACTACCACACCTTCGCCATTGAACCCCGTGTGTCGCGCATCTTC‑TTTGCCGGCCCAACCACCCAGGAAGTCAGTG‑TCGGTTACCGTTACCTGAAGGAAGCGATGCGCGAACAGTCGACTCGCCTGGCGCTGATCGa  <  8:139295/149‑1 (MQ=255)                                                                                                                                                   gt‑AGCCGCGCAACTACAACAACTTCGCCATTGTACCCCGTGTGTCGCGCATCTTC‑TTTGCCGGCCGAACCAGCCAGGAAGTGAGTG‑TCGGTTACCGTTACCTGAAGGAAGCGATGCGCGAACAGTc                       <  8:339128/126‑1 (MQ=255)                                                                                                                                                      |                                                                                                                                                   GACTACTTCGCGGGCCGGCGCAAGGATGTGTCGTTCAAATGGCAGCGGCAGCTCGACGATGCCACCCAGTTCGAAGTGCTGACCTACTACACCGACAGCTTCCGCGGCAGCACAATAGCCTCGCGGGACATGAAGACGTTGTCGTCGT‑ACCCGCGCAACTACCACACCTTCGCCATTGAACCCCGTGTGTCGCGCATCTTC‑TTTGCCGGCCCAACCACCCAGGAAGTCAGTG‑TCGGTTACCGTTACCTGAAGGAAGCGATGCGCGAACAGTCGACTCGCCTGGCGCTGATCGA  >  NC_002947/1006178‑1006470

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.