New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2097610 =	63 (1.020)	4 (0.070)	4/250	NT	6.4%	coding (2280/2358 nt)	PP_1875	two‑component system sensor histidine kinase/response regulator
	?	NC_002947	2097650 =	57 (0.980)					coding (2240/2358 nt)	PP_1875	two‑component system sensor histidine kinase/response regulator

GACCTGGTGCTGATGGACTGCAACATGCCGGTGATGGACGGCTACGAGGCCAGCCGGCGTATCCGCCAAAGCGGCCGCTGGCCCGAGTTGCCCATCGTCGCCCTCACCGCCAACGCCATGCCCGAAGAACGCGAACGCTGCCGGGCGGCGGGCATG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2097765‑2097610 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgggcatgGCGTTGGCGGTGAGGGCGACGATGGGCAACTCGGGCCAGCGGCCGCTTTGGCGGATACGCCGGCTGGCCTCGTAGCCGTCCATCACCGGCATGTTGCAGTCCATCAGCACCAGGTCGAATTCCTCGCGCGCCAGCAGCTCAAGGGCC  >  NC_002947/2097650‑2097796                                                                                                                                                                                                                                                                                                                 GACCTGGTGCTGATGGACTGCAACATGCCGGTGATGGACGGCTACGAGGCCAGCCGGCGTATCCGCCAAAGCGGCCGCTGGCCCGAGTTGCCCATCGTCGCCCTCACCGCCAACGCCATGCCCGAAGAACGCGAACGCTGCCGGGCGGC                                                                                                                                                            <  4:221856/149‑1  cCCTGGTGCTGATGGACTGCTACATGCCTGGGATGGACGGCTAGGAGGCCAGCCGGCGTATCCGCCAAAGCGGCCGCTGGCCCGAGTTGCCCATCGTCGCCCTCACCGCCAACGCCATGCCCGAAGAACGCGAACGCTGCCGGGCGGCG                                                                                                                                                           <  4:300208/148‑1   CCTGGTGCTGATGGACTGCAACATGCCGGTGATGGATGGCTACGAGGCCAGCCGGCGTATCCGCCAAAGCGGCCGCAGGCCCGAGTTGCCCATTGTCGCCCTCACCGCCAACGCCATGCCCGAAGAACGCGAACGCTGCCGGGCGGCGG                                                                                                                                                          <  2:185538/149‑1   CCTGGTGCTGATGGACTGCAACATGCCGGTGATGGACGGCTACGAGGCCAGCCGGCGTATCCGCCAAAGCGGCCGCTGGCCCGAGTTGCCCATCGTCGCCCTCACCGCCAACGCCATGCCCGAAGAACGCGAACGCTGCCGGGCGGCGG                                                                                                                                                          <  1:337931/149‑1       GTGCTGATGGACTGCAACATGCCGGTGATGGACGGCTACGAGGCCAGCCGGCGTATCCGCCAAAGCGGCCGCTGGCCCGAGTTGCCCATCGTCGCCCTCACCGCCAACGCCATGCCCGAAGAACGCGAACGCTGCCGGGCGGCGGGCAT                                                                                                                                                      <  2:104353/149‑1       GTGCTGATGGACTGCAACATGCCGGTGATGGACGGCTACGAGGCCAGCCGGCGTATCCGCCAAAGCGGCCGCTGGCCCGAGTTGCCCATCGTCGCCCTCACCGCCAACGCCATGCCCGAAGAACGCGAACGCTGCCGGGCGGCGGGCAT                                                                                                                                                      >  2:381849/1‑149       GTGCTGATGGACTGCAACATGCCGGTGATGGACGGCTACGAGGCCAGCCGGCGTATCCGCCAAAGCGGCCGCTGGCCCGAGTTGCCCATCGTCGCCCTCACCGCCAACGCCATGCCCGAAGAACGCGAACGCTGCCGGGCGGCGGGCAT                                                                                                                                                      <  8:11414/149‑1       GTGCTGATGGACTGCAACATGCCGGTGATGGACGGCTACGAGGCCAGCCGGCGTATCCGCCAAAGCGGCCGCTGGCCCGAGTTGCCCATCGTCGCCCTCACCGCCAACGCCATGCCCGAAGAACGCGAACGCTGCCGGGCGGCGGGC                                                                                                                                                        <  2:162865/147‑1                                                                                                                     CATGCCCGAAGAACGCGAACGCTGCCGGGCGGCGGGCATGGCGTTGGCGGTGAGGGCGACGATGGGCAACTCGGGCCAGCGGCCGCTTTGGCGGATACGCCGGCTGGCCTCGTAGCCGTCCATCACCGGCATGTTGCAGTCCATCAGCA                                        >  4:80075/1‑149                                                                                                                        GCCCGAAGAACGCGAACGCTGCCGGGCGGCGGGCATGGCGTTGGCGGTGAGGGCGACGATGGGCAACTCGGGCCAGCGGCCGCTTTGGCGGATACGCCGGCTGGCCTCGTAGCCGTCCATCACCGGCATGTTGCAGTCCATCAGCAC                                       >  6:75349/1‑147                                                                                                                         CCCGAAGAACGCGAACGCTGCCGGGCGGCGGGCATGGCGTTGGCGGTGAGGGCGACGATGGGCAACTCGGGCCAGCGGCCGCTTTGGCGGATACGCCGGCTGGCCTCGTAGCCGTCCATCACCGG                                                            <  1:104289/125‑1                                                                                                                         CCCGAAGAACGCGAACGCTGCCGGGCGGCGGGCATGGCGTTGGCGGTGAGGGCGACGATGGGCAACTCGGGCCAGCGGCCGCTTTGGCGGATACGCCGGCTGGCCTCGTAGCCGTCCATCACCGG                                                            >  2:104289/1‑125                                                                                                                                                     CGGGCATAGCGTTGGCGGTGAGGGCGACGATGGGCAACTCGGGCCAGCGGCCGCTTTGGCGGATACGCCGGCTGGCCTCGTAGCCGTCCATCACCGGCATGTTGCAGTCCATCAGCACCAGGTCGAATTCCTCGCGCGCCAGCAGCTC         >  8:160128/1‑148                                                                                                                                                           TGGCGTTGGCGGTGAGGGCGACGATGGGCAACTCGGGCCAGCGGCCGCTTTGGCGGATACGCCGGCTGGCCTCGTAGCCGTCCATCACCGGCATGTTGCAGTCCATCAGCACCAGGTCGAATTCCTCGCGCGCCAGCAGCTCAAGGGCC  <  3:256830/149‑1                                                                                                                                                                                                                                                                                                                 GACCTGGTGCTGATGGACTGCAACATGCCGGTGATGGACGGCTACGAGGCCAGCCGGCGTATCCGCCAAAGCGGCCGCTGGCCCGAGTTGCCCATCGTCGCCCTCACCGCCAACGCCATGCCCGAAGAACGCGAACGCTGCCGGGCGGCGGGCATG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2097765‑2097610 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgggcatgGCGTTGGCGGTGAGGGCGACGATGGGCAACTCGGGCCAGCGGCCGCTTTGGCGGATACGCCGGCTGGCCTCGTAGCCGTCCATCACCGGCATGTTGCAGTCCATCAGCACCAGGTCGAATTCCTCGCGCGCCAGCAGCTCAAGGGCC  >  NC_002947/2097650‑2097796

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.