New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2097610 =	63 (1.020)	4 (0.070)	4/250	NT	6.4%	coding (2280/2358 nt)	PP_1875	two‑component system sensor histidine kinase/response regulator
	?	NC_002947	2097650 =	57 (0.980)					coding (2240/2358 nt)	PP_1875	two‑component system sensor histidine kinase/response regulator

AGTGGCCAGGTCAAGCGCTATGCCCCCACCACCAAGCCACAGGCCCTGGAGGCGGACATCGAGCGTTTGCTCAGCCGCTGAAGGGCACCCAATGGTCGACCA‑GGGCCAGTAGCTCTTCGCGGCGGAATGGCTTGGCCAGGTAGTCGTTCATGCCCGCCGCCCGGCAGCGTTCGCGTTCTT‑CGGGCATGGCGTTGGCGGTGAGGGCGACGATGGGCAACTCGGGCCAGCGGCCGCTTTGGCGGATACGCCGGCTGGCCTCGTAGCCGTCCATCACCGGCATGTTGCAGTCCATCAG  >  NC_002947/2097462‑2097756                                                                                                                                                      |                                                                                                                                                    aGTGGCCAGGTCAAGCGCTATGCCCCCACCACCAAGCCACAGGCCCTGGAGGCGGACATCGAGCGTTTGCTCAGCCGCTGAAGGGCACCCAATGGTCGACCA‑GGGCCAGTAGCTCTTCGCGGCGGAATGGCTTGGCCAGGTAGTCGTTc                                                                                                                                                     <  1:9389/149‑1 (MQ=255)   ggcccttgagctgctggcgcgcgaggaattcgacctggtgctgatggactgcaacatgccggtgatggacggctacgaggccagccggcgtatccgccaaagcggccgctggcccgagttgcccatcgtcgccctcaccgccaacgcCa                                                                                                                                                    <  3:256830‑M1/2‑1 (MQ=255)     ggcAGGTCAGGCGCTATGCCCCCACCACCAAGCCACAGGCCCTGGAGGCGGACATCGAGCGTTTGCTCAGCCGCTGAGGGGCACCGCATGGTCGCCCA‑GGGCCAGTAGGTGGTCGCGGGGGTGTGGCTTGGCCCGGTAGGCGTGCATGc                                                                                                                                                 >  4:328640/3‑149 (MQ=255)      ccAGGTCAAGCGCTATGCCCCCACCACCAAGCCACAGGCCCTGGAGGCGGACATCGAGCGTTTGCTCAGCCGCTGAAGGGCACCCAATGGTCGACCA‑GGGCCAGTAGCTCTTCGCGGCGGAATGGCTTGGCCAGGTAGTCGTTCATGcc                                                                                                                                                >  2:279606/1‑149 (MQ=255)          gagctgctggcgcgcgaggaattcgacctggtgctgatggactgcaacatgccggtgatggacggctacgaggccagccggcgtatccgccaaagcggccgctggcccgagttgcccatcgtcgccctcaccgccaacgcTATGCccg                                                                                                                                              >  8:160128‑M1/141‑148 (MQ=255)          gTCAAGCGCTATGCCCCCACCACCAAGCCACAGGCCCTGGAGGCGGACATCGAGCGTTTGCTCAGCCGCTGAAGGGCACCCAATGGTCGACCA‑GGGCCAGTAGCTCTTCGCGGCGGAATGGCTTGGCCAGGTAGTCGTTCATGCccgcc                                                                                                                                            <  4:72171/149‑1 (MQ=255)             aaGCGCTATGCCCCCACCACCAAGCCACAGGCCCTGGAGGCGGACATCGAGCGTTTGCTCAGCCGCTGAAGGGCACCCAACGGTCGACCA‑GGGCCAGTAGCTCTTCGCGGCGGAATGGCTTGGCCAGGTAGTCGTTCATGCCCgccgcc                                                                                                                                         >  1:72178/1‑149 (MQ=255)                  cTATGCCCCAACCACCAAGCCACAGGCCCTGGAGGCGGACATCGAGCGTTTGCTCAGCCGCTGAAGGGCACCCAATGGTCGACCC‑GGGCCAGTAGCTCTTCGCGGCGGAATGGCTTGGCCAGGTAGTCGTTCATGCCCGCCGCCCGGCa                                                                                                                                    <  8:253050/149‑1 (MQ=255)                     tGCCCCCACCACCAAGCAACAGTCCCTGGAGGCGGACATCGAGCGTTTGCGCAGCCGCTGAAGGGCACCCAATGGTCGACCA‑GGGCCAGGAGCTCATCGCGGCGTAATGTCTTGGCCAGGTAGTCGTTCATGCCCGCCGCCCGGCAgc                                                                                                                                  <  1:74598/148‑1 (MQ=255)                        ccccACCACCAAGCCACAGGCCCTGGAGGCGGACATCGAGCGTTTGCTCAGCCGCTGAAGGGCACCCAATGGTCGACCA‑GGGCCAGTAGCTCTTCGCGGCGGAATGGCTTGGCCAGGTAGTCGTTCATGCCCGCCGCCCGGCAgcgttc                                                                                                                              >  3:107427/1‑149 (MQ=255)                          ccaccaccaAGCCACAGGCCCTGGAGGCGGACATCGAGCGTTTGCTCAGCCGCTGAAGGGCACCCAATGGTCGACCA‑GGGCCAGTAGCTCTTCGCGGCGGAATGGCTTGGCCAGGTAGTCGTTCATGCCCGCCGCCCGGCAgcgttcgc                                                                                                                            <  2:124524/149‑1 (MQ=255)                           caccaccaAGCCACAGGCCCTGGAGGCGGACATCGAGCGTTTGCTCAGCCGCTGAAGGGCACCAAATGGTCGACCA‑GGGCCCGTAGCTCTTCGCGGCGGAATGGCTTGGCCAGGTAGTCGTTCATGCCCGCCGCCCGGCAgcgttcgcg                                                                                                                           >  5:169394/1‑149 (MQ=255)                              caccaAGCCACAGGCCCTGGAGGCGGACATCGAGCGTTTGCTCAGCCGCTGAAGGGCACCCAATGGTCGACCA‑GGGCCAGTAGCTCTTCGCGGCGGAATGGCTTGGCCAGGTAGTCGTTCATGCCCTCCGCCCGGCAgcgttcgcgttc                                                                                                                        >  6:267832/1‑149 (MQ=255)                              caccaAGCCACAGGCCCTGGAGGCGGACATCGAGCGTTTGCTCAGCCGCTGAAGGGCACCCAATGGTCGACCA‑GGGCCAGTAGCTCTTCGCGGCGGAATGGCTTGGCCAGGTAGTCGTTCATGCCCGCCGCCCGGCAgcgttcgc                                                                                                                            <  4:165868/145‑1 (MQ=255)                              caccaAGCCACAGGCCCTGGAGGCGGACATCGAGCGTTTGCTCAGCCGCTGAAGGGCACCCAATGGTCGACCA‑GGGCCAGTAGCTCTTCGCGGCGGAATGGCTTGGCCAGGTAGTCGTTCATGCCCGCCGCCCGGCAgcgttcgc                                                                                                                            >  3:165868/1‑145 (MQ=255)                               accaAGCCACAGGCCCTGGAGGCGGACATCGAGCGTTTGCTCAGCCGCTGAAGGGCACCCAATGGTCGACCA‑GGGCCAGTAGCTCTTCGCGGCGGAATGGCTTGGCCAGGTAGTCGTTCATGCCCGCCGCCCGGCAGCGTTCGCGttct                                                                                                                       >  4:252383/1‑149 (MQ=255)                                 caAGCCACAGGCCCTGGAGGCGGACATCGAGCGTTTGCTCAGCCGCTGAAGGGCACCCAATGGTCGACCA‑GGGCCAGTAGCTCTTCGCGGCGGAATGGCTTGGCCAGGTAGTCGTTCATGCCCGCCGCCCGGCAGCGTTCGCGttctt‑c                                                                                                                    >  1:61298/1‑149 (MQ=255)                                   atccACAGGCCCTGGAGGCGGACATCGAGCTTTTGCTCATCCGCTGAAGGGCACCCAATGGTCGACCA‑GGGCCAGTAGCTCTTCGCGGCGGAATTTCTTGGCCAGGTAGTCGTTCATTCCCGCCGCCCGGCATCGTTCGCGTTCTT‑Cgg                                                                                                                  <  2:60341/147‑1 (MQ=255)                                   aGCCACAGGCCCTGGAGGCGGACATCGAGCGTTTGCTCAGCCGCTGAAGGGCACCCAATGGTCGACCA‑GGGCCAGTAGCTCTTCGCGGCGGAATGGCTTGGCCAGGTAGTCGTTCATGCCCGCCGCCCGGCAGCGTTCGCGTTCTT‑Cgg                                                                                                                  <  1:363104/149‑1 (MQ=255)                                        gtgctgatggactgcaacatgccggtgatggacggctacgaggccagccggcgtatccgccaaagcggccgctggcccgagttgcccatcgtcgccctcaccgccaacgcCATGCCCGCCGCCCGGCAGCGTTCGCGTTCTT‑CGGGc                                                                                                                >  6:75349‑M1/111‑147 (MQ=255)                                        caGGCCCTGGAGGCGGACATCGAGCGTTTGCTCAGCCGCTGAAGGGCACCCAATGGTCGACCA‑GGGCCAGTAGCTCTTCGCGGCGGAATGGCTTGGCCAGGTAGTCGTTCATGCCCGCCGCCCGGCAGCGTTCGCGTTCTT‑CGGGCATg                                                                                                             <  5:267832/149‑1 (MQ=255)                                         tgctgatggactgcaacatgccggtgatggacggctacgaggccagccggcgtatccgccaaagcggccgctggcccgagttgcccatcgtcgccctcaccgccaacgcCATGCCCGCCGCCCGGCAGCGTTCGCGTTCTT‑CGGGCATg                                                                                                             >  4:80075‑M1/110‑149 (MQ=255)                                          ggCCCTGGAGGCGGACATCGAGCGTTTGCTCAGCCGCTGAAGGGCACCCAATGGTCGACCA‑GGGCCAGTAGCTCTTCGCGGCGGAATGGCTTGGCCAGGTAGTCGTTCATGCCCGCCGCCCGGCAGCGTTCGCGTTCTT‑CGGGCATGGc                                                                                                           <  4:117544/149‑1 (MQ=255)                                           gCCCTGGAGGCGGACATCGAGCGTTTGCTCAGCCGCTGAAGGGCACCCAATGGTCGACCA‑GGGCCAGTAGCTCTTCGCGGCGGAATGGCTTGGCCAGGTAGTCGTTCATGCCCGCCGCCCGGCAGCGTTCGCGTTCTT‑CGGGCATGGCg                                                                                                          <  6:299797/149‑1 (MQ=255)                                                 gAGGCGGACATCGAGCGTTTGCTCAGCCGCTGAAGGGCACCCAATGGTCGACCA‑GGGCCAGTAGCTCTTCGCGGCGGAATGGCTTGGCCAGGTAGTCGTTCATGCCCGCCGCCCGGCAGCGTTCGCGTTCTT‑CGGGCATGGCGTTGGCg                                                                                                    <  6:79025/149‑1 (MQ=255)                                                       gccATCGAGGGGTTGCTCAGCCGCTGAAGGGCACCCAATGGTCGACCA‑GGCCCAGTAGCTCTTCGCGGCGGAATGGCTTGTCCAGGTAGTCGTTCATGCCCGCCGCCCGGCAGCGTTCGCGTTCTT‑CGGGCATGGCGTTGGCGGTGAgg                                                                                              <  6:169394/147‑1 (MQ=255)                                                       gACATCGAGCGTTTGCTCAGCCGCTGAAGGGCACCCAATGGTCGACCAGGGGCCAGTAGCTCTTCGCGGCGGAATGGCTTGGCCAGGTAGTCGTTCATGCCCGCCGCCCGGCAGCGTTCGCGTTCTT‑CGGGCATGGCGTTGGCGGTGAg                                                                                               >  1:291133/1‑149 (MQ=255)                                                        aCATCGAGCGTTTGCTCAGCCGCTGAAGGGCACCCAATGGTCGACCA‑GGGCCAGTAGCTCTTCGCGGCGGAATGGCTTGGCCAGGTAGTCGTTCATGCCCGCCGCCCGGCAGCGTTCGCGTTCTT‑CGGGCATGGCGTTGGCGGTGAggg                                                                                             <  1:279606/149‑1 (MQ=255)                                                            cGAGCGTTTGCTCAGCCGCTGAAGGGCACCCAATGGTCGACCA‑GGGCCAGTAGCTCTTCGCGGCGGAATGGCTTGGCCAGGTAGTCGTTCATGCCCGCCGCCCGGCAGCGTTCGCGTTCTT‑CGGGCATGGCGTTGGCg                                                                                                    >  7:288390/1‑138 (MQ=255)                                                            cGAGCGTTTGCTCAGCCGCTGAAGGGCACCCAATGGTCGACCA‑GGGCCAGTAGCTCTTCGCGGCGGAATGGCTTGGCCAGGTAGTCGTTCATGCCCGCCGCCCGGCAGCGTTCGCGTTCTT‑CGGGCATGGCGTTGGCg                                                                                                    <  8:288390/138‑1 (MQ=255)                                                             ccggtgatggacggctacgaggccagccggcgtatccgccaaagcggccgctggcccgagttgcccatcgtcgccctcaccgccaacgcCATGCCCGCCGCCCGGCAGCGTTCGCGTTCTT‑Cggg                                                                                                                 >  2:104289‑M1/90‑125 (MQ=255)                                                             ccggtgatggacggctacgaggccagccggcgtatccgccaaagcggccgctggcccgagttgcccatcgtcgccctcaccgccaacgcCATGCCCGCCGCCCGGCAGCGTTCGCGTTCTT‑Cggg                                                                                                                 <  1:104289‑M1/36‑1 (MQ=255)                                                                     gcgcAGCCGCGGCAGGGCACCCAAGGGTCGACCA‑GGGCCAGTAGCTCTTCGCGGCGGAATGGCTGGGGCAGGTAGTCGTTCATGCACGCCGCCCGGCCGCGGTGGCGGTCTG‑CGGGCATGGGGTGGGCGGTGCGGGCGGCGGTGGGCaa                                                                                >  2:11780/4‑149 (MQ=255)                                                                     gCTCAGCCGCTGAAGGGCACCCAATGGTCGACCA‑GGGCCAGTAGCTCTTCGCGGCGGAATGGCTTGGCCAGGTAGTCGTTCATGCCCGCCGCCCGGCAGCGTTCGCGTTCTT‑CGGGCATGGCGTTGGCGGTGAGGGCGACGATGGGCaa                                                                                >  6:220198/1‑149 (MQ=255)                                                                       tCAGCCGCTGAAGGGCACCCAATGGTCGACCA‑GGGCCAGTAGCTCTTCGCGGCGGAATGGCTTGGCCAGGTAGTCGTTCATGCCCGCCGCCCGGCAGCGTTCGCGTTCTT‑CGGGCATGGCGTTGGCGGTGAGGGCGACGATGGGCAACt                                                                              >  5:297529/1‑149 (MQ=255)                                                                       tCAGCCGCTGAAGGGCACCCAATGGTCGACCA‑GGGCCAGTAGCTCTTCGCGGCGGAATGGCTTGGCCAGGTAGTCGTTCATGCCCGCCGCCCGGCAGCGTTCGCGTTCTT‑CGGGCATGGCGTTGGCGGTGAGGGCGACGATGGGCAACt                                                                              >  7:254411/1‑149 (MQ=255)                                                                          gCCGCTGAAGGGCACCCAATGGTCGACCA‑GGGCCAGTAGCTCTTCGCGGCGGAATGGCTTGGCCAGGTAGTCGTTCATGCCCGCCGCCCGGCAGCGTTCGCGTTCTT‑CGGGCATGGCGTTGGCGGTGAGGGCGACGATGGGCAACTCgg                                                                           <  3:328640/149‑1 (MQ=255)                                                                           ccGCTGAAGGGCACCCAATGGTCGACCA‑GGGCCAGTAGCTCTTCGCGGCGGAATGGCTTGGCCAGGTAGTCGTTCATGCCCGCCGCCCGGCAGCGTTCGCGTTCTT‑CGGGCATGGCGTTGGCGGTGAGGGCGACGATGGGCAACTCggg                                                                          >  8:96582/1‑149 (MQ=255)                                                                               tGAAGGGCACCCAATGGTCGACCA‑GGGCCAGTAGCTCTTCGCGGCGGAATGGCTTGGCCAGGTAGTCGTTCATGCCCGCCGCCCGGCAGCGTTCGCGTTCTT‑CGGGCATGGCGTTGGCGGTGAGGGCGACGATGGGCAACTCGGGCCAg                                                                      >  1:381849/1‑149 (MQ=255)                                                                               tGAAGGGCACCCAATGGTCGACCA‑GGGCCAGTAGCTCTTCGCGGCGGAATGGCTTGGCCAGGTAGTCGTTCATGCCCGCCGCCCGCCAGCGTTCGCGTTCTT‑CGGGCATGGCGTTGGCCGTGAGGGCGACGATGGGCAACTCGGGCCac                                                                      >  7:166549/1‑148 (MQ=255)                                                                               tGAAGGGCACCCAATGGTCGACCA‑GGGCCAGTAGCTCTTCGCGGCGGAATGGCTTGGCCAGGTAGTCGTACATGCCCGCCGCCCGGCAGCGTTCGCGTTCTT‑CGGGCATGGCCTTGGCGGTGAGGGCGACGATGGGCAACTCGGGCCAg                                                                      >  6:205042/1‑149 (MQ=255)                                                                                   gggCACCCAATGGTCGACCA‑GGGCCAGTAGCTCTTCGCGGCGGAATGGCTTGGCCAGGTAGTCGTTCATGCCCGCCGCCCGGCAGCGTTCGCGTTCTT‑CGGGCATGGCGTTGGCGGTGAGGGCGACGATGGGCAACTCGGGCCAGCGGc                                                                  >  2:354174/1‑149 (MQ=255)                                                                                    ggCACCCAATGGTCGACCA‑GGGCCAGTAGCTCTTCGCGGCGGAATGGCTTGGCCAGGTAGTCGTTCATGCCCGCCGCCCGGCAGCGTTCGCGTTCTTACGGGCATGGCGTTGGCGGTGAGGGCGACGATGGGCAACTCGGGCCAGCGGc                                                                  <  1:95742/149‑1 (MQ=255)                                                                                       aCCCAATGGTCGACCA‑GGGCCAGTAGCTCTTCGCGGCGGAATGGCTTGGCCAGGTAGTCGATCATGCCCGCCGCCCGGCAGCGTTCGCGTTCTT‑CGGGCATGGCGTTGGCGGTGAGGGCGACGATGGGCAACTCGGGCCAGCGGCCGCt                                                              >  7:92706/1‑149 (MQ=255)                                                                                        cccAATGGTCGACCA‑GGGCCAGTAGCTCTTCGCGGCGGAATGGCTTGGCCAGGTAGTCGTTCATGCCCGCCGCCCGGCAGCGTTCGCGTTCTT‑CGGGCATGGCGTTGGCGGTGAGGGCGACGATGGGCAACTCGGGCCAGCGGCCGc                                                               <  3:2871/147‑1 (MQ=255)                                                                                        cccAATGGTCGACCA‑GGGCCAGTAGCTCTTCGCGGCGGAATGGCTTGGCCAGGTAGTCGTTCATGCCCGCCGCCCGGCAGCGTTCGCGTTCTT‑CGGGCATGGCGTTGGCGGTGAGGGCGACGATGGGCAACTCGGGCCAGCGGCCGc                                                               >  4:2871/1‑147 (MQ=255)                                                                                           aaTGGTCGACCA‑GGGCCAGTAGCTCTTCGCGGCGGAATGGCTTGGCCAGGTAGTCGTTCATGCCCGCCTCCCGGCAGCGTTCGCGTTCTT‑CGGGCATGGCGTTGGCGGTGAGGGCGACGATGGGCAACTCGGGCCAGCGGCCGCTTTgg                                                          >  7:196688/1‑149 (MQ=255)                                                                                            aTGGTCGACCA‑GGGCCAGTAGCTCTTCGCGGCGGAATGGCTTGGCCAGGTAGTCGTTCATGCCCGCCGCCCGGCAGCGTTCGCGTTCTT‑CGGGCATGGCGTTGGCGGTGAGGGCGACGATGGGCAACTCGGGCCAGCGGCCGCTTTGGc                                                         <  8:166549/149‑1 (MQ=255)                                                                                                tCGACCA‑GGGCCAGTAGCTCTTCGCGGCGGAATGGCTTGGCCAGGTAGTCGTTCATGCCCGCCGCCCGGCAGCGTTCGCGTTCTT‑CGGGCATGGCGTTGGCGGTGAGGGCGACGATGGGCAACTCGGGCCAGCGGCCGCTTTGGCGGa                                                      >  6:357785/1‑148 (MQ=255)                                                                                                  gACCA‑GGGCCAGTAGCTCTTCGCGGCGGAATGGCTTGGCCAGGTAGTCGTTCATGCCCGCCGCCCGGCAGCGTTCGCGTTCTT‑CGGGCATGGCGTTGGCGGTGAGGGCGACGATGGGCAACTCGGGCCAGCGGCCGCTTTGGCGGATAc                                                   >  3:250009/1‑149 (MQ=255)                                                                                                   aCCA‑GGGCCAGTAGCTCTTCGCGGCGGAATGGCTTGGCCAGGTAGTCGTTCATGCCCGCCGCCCGGCAGCGTTCGCGTTCTT‑CGGGCATGGCGTTGGCGGTGAGGGCGACGATGGGCAACTCGGGCCAGCGGCCGCTTTGGCGGATACg                                                  >  4:184910/1‑149 (MQ=255)                                                                                                     cA‑GGGCCAGTAGCTCTTCGCGGCGGAATGGCTTGGCCAGGTAGTCGTTCATGCCCGCCGCCCGGCAGCGTTCGCGTTCTT‑CGGGCATGGCGTTGGCGGTGAGGGCGACGATGGGCAACTCGGGCCAGCGGCCGCTTTGGCGGATACGcc                                                >  6:242814/1‑149 (MQ=255)                                                                                                        gggCCAGTAGCTCTTCGCGGCGGAATGGCTTGGCCAGGTAGTCGTTCATGCCCGCCGCCCGGCAGCGTTCGCGTTCTT‑CGGGCATGGCGTTGGCGGTGAGGGCGACGATGGGCAACTCGGGCCAGc                                                                     >  5:298651/1‑126 (MQ=255)                                                                                                        gggCCAGTAGCTCTTCGCGGCGGAATGGCTTGGCCAGGTAGTCGTTCATGCCCGCCGCCCGGCAGCGTTCGCGTTCTT‑CGGGCATGGCGTTGGCGGTGAGGGCGACGATGGGCAACTCGGGCCAGc                                                                     <  6:298651/126‑1 (MQ=255)                                                                                                          gCCAGTAGCTCTTCGCGGCGGAATGGCTTGGCCAGGTAGTCGTTCATGCCCGCCGCCCGGCAGCGTTCGCGTTCTT‑CGGGCATGGCGTTGGCGGTGAGGGCGACGATGGGCAACTCGGGCCAGCGGCCGCTTTGGCGGATACGCCGGCt                                            <  8:254411/149‑1 (MQ=255)                                                                                                                  ctctTCGCGGCGGAATGGCTTGGCCAGGTAGTCGTTCATGCCCGCCGCCCGGCAGCGTTCGCGTTCTT‑CGGGCATGGCGTTGGCGGTGAGGGCGACGATGGGCAACTCGGGCCAGCGGCCGCTTTGGCGGATACGCCGGCTGGCCTCg                                     >  1:95640/1‑148 (MQ=255)                                                                                                                     ttCGCGGCGGAATGGCTTGGCCAGGTAGTCGTTCATGCCCGCCGCCCGGCAGCGTTCGCGTTCTT‑CGGGCATGGCGTTGGCGGTGAGGGCGACGATGGGCAACTCGGGCCAGCGGCCGCTTTGGCGGATACGCCGGCTGGCCTCGTa                                   <  2:95640/147‑1 (MQ=255)                                                                                                                     ttCGCGGCGGAATGGCTTGGCCAGGTAGTCGTTCATGCCCGCCGCCCGGCAGCGTTCGCGTTCTT‑CGGGCATGGCGTTGGCGGTGAGGGCGACGATGGGCAACTCGGGCCAGCGGCCGCTTTGGCGGATACGCCGGCTGGCCTCGTa                                   <  4:250009/147‑1 (MQ=255)                                                                                                                       cgcgGCGGAATGGCTTGGCCAGGTAGTCGTTCATGCCCGCCGCCCGGCAGCGTTCGCGTTCTT‑CGGGCATGGCGTTGGCGGTGAGGGCGACGATGGGCAACTCGGGCCAGCGGCCGCTTTGGCGGATACGCCGGCTGGCCTCGTAGcc                                <  5:220198/148‑1 (MQ=255)                                                                                                                       cgcgGCGGAATGGCTTGGCCAGGTAGTCGTTCATGCCCGCCGCCCGGCAGCGTTCGCGTTCTT‑CGGGCATGGCGTTGGCGGTGAGGGCGACGATGGGCAACTCGGGCCAGCGGCCGCTTTGGCGGATACGCCGGCTGGCCTCGTAGc                                 <  2:72178/147‑1 (MQ=255)                                                                                                                       cgcgGCGGAATGGCTTGGCCAGGTAGTCGTTCATGCCCGCCGCCCGGCAGCGTTCGCGTTCTT‑CGGGCATGGCGTTGGCGGTGAGGGCGACGATGGGCAACTCGGGCCAGCGGCCGCTTTGGCGGATACGCCGGCTGGCCTCGTAGc                                 <  1:354174/147‑1 (MQ=255)                                                                                                                        gcggcgGAATGGCTTGGCCAGGTAGTCGTTCATGCCCGCCGCCCGGCAGCGTTCGCGTTCTT‑CGGGCATGGCGTTGGCGGTGAGGGCGACGATGGGCAACTCGGGCCAGCGGCCGCTTTGGCGGATACGCCGGCTGGCCTCGTAGCCg                               <  5:242814/148‑1 (MQ=255)                                                                                                                         cggcggAATGGCTTGGCCAGGTAGTCGTTCATGCCCGCCGCCCGGCAGCGTTCGCGTTCTT‑CGGGCATGGCGTTGGCGGTGAGGGCGACGATGGGCAACTCGGGCCAGCGGCCGCTTTGGCGGATACGCCGGCTGGCCTCGTAGCCGTc                             <  4:107427/149‑1 (MQ=255)                                                                                                                          ggcggAATGGCTTGGCCAGGTAGTCGTTCATGCCCGCCGCCCGGCAGCGTTCGCGTTCTT‑CGGGCATGGCGTTGGCGGTGAGGGCGACGATGGGCAACTCGGGCCAGCGGCCGCTTTGGCGGATACGCCGGCTGGCCTCGTAGCCGTcc                            <  2:124371/149‑1 (MQ=255)                                                                                                                             ggAATGGCTTGGCCAGGTAGTCGTTCATGCCCGCCGCCCGGCAGCGTTCGCGTTCTT‑CGGGCATGGCGTTGGCGGTGAGGGCGACGATGGGCAACTCGGGCCAGCGGCCGCTTTGGCGGATACGCCGGCTGGCCTCGTAGCCGTCCATc                         >  5:45332/1‑149 (MQ=255)                                                                                                                                aTGGCTTGGCCAGGTAGTCGTTCATGCCCGCCGCCCGGCAGCGTTCGCGTTCTT‑CGGGCATGGCGTTGGCGGTGAGGGCGACGATGGGCAACTCGGGCCAGCGGCCGCTTTGGCGGATACGCCGGCTGGCCTCGTAGCCGTCCATCAcc                      >  7:187903/1‑149 (MQ=255)                                                                                                                                   gCTTGGCCAGGTAGTCGTTCATGCCCGCCGCCCGGCAGCGTTCGCGTTCTT‑CGGGCATGGCGTTGGCGGTGAGGGCGACGATGGGCAACTCGGGCCAGCGGCCGCTTTGGCGGATACGCCGGCTGGCCTCGTAGCCGTCCATCACCgg                    >  6:93898/1‑148 (MQ=255)                                                                                                                                   gCTTGGCCAGGTAGTCGTTCATGCCCGCCGCCCGGCAGCGTTCGCGTTCTT‑CGGGCATGGCGTTGGCGGTGAGGGCGACGATGGGCAACTCGGGCCAGCGGCCGCTTTGGCGGATACGCCGGCTGGCCTCGTAGCCGTCCATCACCgg                    >  4:13086/1‑148 (MQ=255)                                                                                                                                       ggCCAGGTAGTCGTTCATGCCCGCCGCCCGGCAGCGTTCGCGTTCTT‑CGGGCATGGCGTTGGCGGTGAGGGCGACGATGGGCAACTCGGGCCAGCGGCCGCTTTGGCGGATACGCCGGCTGGCCTCGTAGCCGTCCATCACCGGCATg                <  2:61298/148‑1 (MQ=255)                                                                                                                                          cAGGTAGTCGTTCATGCCCGCCGCCCGGCAGCGTTCGCGTTCTT‑CGGGCATGGCGTTGGCGGTGAGGGCGACGATGGGCAACTCGGGCCAGCGGCCGCTTTGGCGGATACGCCGGCTGGCCTCGTAGCCGTCCATCACCGGCATGTTg             >  2:191034/1‑148 (MQ=255)                                                                                                                                           aGGTAGTCGTTCATGCCCGCCGCCCGGCAGCGTTCGCGTTCTT‑CGGGCATGGCGTTGGCGGTGAGGGCGACGATGGGCAACTCGGGCCAGCGGCCGCTTTGGCGGATACGCCGGCTGGCCTCGTAGCCGTCCATCACCGGCATGTTGCa           <  7:96582/149‑1 (MQ=255)                                                                                                                                                   gTTCATGCCCGCCGCCCGGCAGCGTTCGCGTTCTT‑CGGGCATGGCGTTGGCGGTGAGGGCGACGATGGGCAACTCGGGCCAGCGGCCGCTTTGGCGGATACGCCGGCTGGCCTCGTAGCCGTCCATCACCGGCATGTTGCAGTCCAt     >  4:338780/1‑147 (MQ=255)                                                                                                                                                    ttCATGCCCGCCGCCCGGCAGCGTTCGCGTTCTT‑CGGGCATGGCGTTGGCGGTGAGGGCGACGATGGGCAACTCGGGCCAGCGGCCGCTTTGGCGGATACGCCGGCTGGCCTCGTAGCCGTCCATCACCGGCATGTTGCAGTCCATCAg  >  5:107264/1‑149 (MQ=255)                                                                                                                                                    ttCATGCCCGCCGCCCGGCAGCGTTCGCGTTCTT‑CGGGCATGGCGTTGGCGGTGAGGGCGACGATGGGCAACTCGGGCCAGCGGCCGCTTTGGCGGATACGCCGGCTGGCCTCGTAGCCGTCCATCACCGGCATGTTGCAGTCCATCAg  >  4:209788/1‑149 (MQ=255)                                                                                                                                                      |                                                                                                                                                    AGTGGCCAGGTCAAGCGCTATGCCCCCACCACCAAGCCACAGGCCCTGGAGGCGGACATCGAGCGTTTGCTCAGCCGCTGAAGGGCACCCAATGGTCGACCA‑GGGCCAGTAGCTCTTCGCGGCGGAATGGCTTGGCCAGGTAGTCGTTCATGCCCGCCGCCCGGCAGCGTTCGCGTTCTT‑CGGGCATGGCGTTGGCGGTGAGGGCGACGATGGGCAACTCGGGCCAGCGGCCGCTTTGGCGGATACGCCGGCTGGCCTCGTAGCCGTCCATCACCGGCATGTTGCAGTCCATCAG  >  NC_002947/2097462‑2097756

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.