New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2097610 =	63 (1.020)	4 (0.070)	4/250	NT	6.4%	coding (2280/2358 nt)	PP_1875	two‑component system sensor histidine kinase/response regulator
	?	NC_002947	2097650 =	57 (0.980)					coding (2240/2358 nt)	PP_1875	two‑component system sensor histidine kinase/response regulator

GGCCCTGGAGGCGGACATCGAGCGTTTGCTCAGCCGCTGAAGGGCACCCAATGGTCGACCA‑GGGCCAGTAGCTCTTCGCGGCGGAATGGCTTGGCCAGGTAGTCGTTCATGCCCGCCGCCCGGCAGCGTTCGCGTTCTT‑CGGGCATGGCGTTGGCGGTGAGGGCGACGATGGGCAACTCGGGCCAGCGGCCGCTTTGGCGGATACGCCGGCTGGCCTCGTAGCCGTCCATCACCGGCATGTTGCAGTCCATCAGCACCAGGTCGAATTCCTCGCGCGCCAGCAGCTCAAGGGCC  >  NC_002947/2097503‑2097796                                                                                                                                                      |                                                                                                                                                   ggCCCTGGAGGCGGACATCGAGCGTTTGCTCAGCCGCTGAAGGGCACCCAATGGTCGACCA‑GGGCCAGTAGCTCTTCGCGGCGGAATGGCTTGGCCAGGTAGTCGTTCATGCCCGCCGCCCGGCAGCGTTCGCGTTCTT‑CGGGCATGGc                                                                                                                                                   <  4:117544/149‑1 (MQ=255)  gCCCTGGAGGCGGACATCGAGCGTTTGCTCAGCCGCTGAAGGGCACCCAATGGTCGACCA‑GGGCCAGTAGCTCTTCGCGGCGGAATGGCTTGGCCAGGTAGTCGTTCATGCCCGCCGCCCGGCAGCGTTCGCGTTCTT‑CGGGCATGGCg                                                                                                                                                  <  6:299797/149‑1 (MQ=255)        gAGGCGGACATCGAGCGTTTGCTCAGCCGCTGAAGGGCACCCAATGGTCGACCA‑GGGCCAGTAGCTCTTCGCGGCGGAATGGCTTGGCCAGGTAGTCGTTCATGCCCGCCGCCCGGCAGCGTTCGCGTTCTT‑CGGGCATGGCGTTGGCg                                                                                                                                            <  6:79025/149‑1 (MQ=255)              gccATCGAGGGGTTGCTCAGCCGCTGAAGGGCACCCAATGGTCGACCA‑GGCCCAGTAGCTCTTCGCGGCGGAATGGCTTGTCCAGGTAGTCGTTCATGCCCGCCGCCCGGCAGCGTTCGCGTTCTT‑CGGGCATGGCGTTGGCGGTGAgg                                                                                                                                      <  6:169394/147‑1 (MQ=255)              gACATCGAGCGTTTGCTCAGCCGCTGAAGGGCACCCAATGGTCGACCAGGGGCCAGTAGCTCTTCGCGGCGGAATGGCTTGGCCAGGTAGTCGTTCATGCCCGCCGCCCGGCAGCGTTCGCGTTCTT‑CGGGCATGGCGTTGGCGGTGAg                                                                                                                                       >  1:291133/1‑149 (MQ=255)               aCATCGAGCGTTTGCTCAGCCGCTGAAGGGCACCCAATGGTCGACCA‑GGGCCAGTAGCTCTTCGCGGCGGAATGGCTTGGCCAGGTAGTCGTTCATGCCCGCCGCCCGGCAGCGTTCGCGTTCTT‑CGGGCATGGCGTTGGCGGTGAggg                                                                                                                                     <  1:279606/149‑1 (MQ=255)                   cGAGCGTTTGCTCAGCCGCTGAAGGGCACCCAATGGTCGACCA‑GGGCCAGTAGCTCTTCGCGGCGGAATGGCTTGGCCAGGTAGTCGTTCATGCCCGCCGCCCGGCAGCGTTCGCGTTCTT‑CGGGCATGGCGTTGGCg                                                                                                                                            <  8:288390/138‑1 (MQ=255)                   cGAGCGTTTGCTCAGCCGCTGAAGGGCACCCAATGGTCGACCA‑GGGCCAGTAGCTCTTCGCGGCGGAATGGCTTGGCCAGGTAGTCGTTCATGCCCGCCGCCCGGCAGCGTTCGCGTTCTT‑CGGGCATGGCGTTGGCg                                                                                                                                            >  7:288390/1‑138 (MQ=255)                            gcgcAGCCGCGGCAGGGCACCCAAGGGTCGACCA‑GGGCCAGTAGCTCTTCGCGGCGGAATGGCTGGGGCAGGTAGTCGTTCATGCACGCCGCCCGGCCGCGGTGGCGGTCTG‑CGGGCATGGGGTGGGCGGTGCGGGCGGCGGTGGGCaa                                                                                                                        >  2:11780/4‑149 (MQ=255)                            gCTCAGCCGCTGAAGGGCACCCAATGGTCGACCA‑GGGCCAGTAGCTCTTCGCGGCGGAATGGCTTGGCCAGGTAGTCGTTCATGCCCGCCGCCCGGCAGCGTTCGCGTTCTT‑CGGGCATGGCGTTGGCGGTGAGGGCGACGATGGGCaa                                                                                                                        >  6:220198/1‑149 (MQ=255)                              tCAGCCGCTGAAGGGCACCCAATGGTCGACCA‑GGGCCAGTAGCTCTTCGCGGCGGAATGGCTTGGCCAGGTAGTCGTTCATGCCCGCCGCCCGGCAGCGTTCGCGTTCTT‑CGGGCATGGCGTTGGCGGTGAGGGCGACGATGGGCAACt                                                                                                                      >  7:254411/1‑149 (MQ=255)                              tCAGCCGCTGAAGGGCACCCAATGGTCGACCA‑GGGCCAGTAGCTCTTCGCGGCGGAATGGCTTGGCCAGGTAGTCGTTCATGCCCGCCGCCCGGCAGCGTTCGCGTTCTT‑CGGGCATGGCGTTGGCGGTGAGGGCGACGATGGGCAACt                                                                                                                      >  5:297529/1‑149 (MQ=255)                                 gCCGCTGAAGGGCACCCAATGGTCGACCA‑GGGCCAGTAGCTCTTCGCGGCGGAATGGCTTGGCCAGGTAGTCGTTCATGCCCGCCGCCCGGCAGCGTTCGCGTTCTT‑CGGGCATGGCGTTGGCGGTGAGGGCGACGATGGGCAACTCgg                                                                                                                   <  3:328640/149‑1 (MQ=255)                                  ccGCTGAAGGGCACCCAATGGTCGACCA‑GGGCCAGTAGCTCTTCGCGGCGGAATGGCTTGGCCAGGTAGTCGTTCATGCCCGCCGCCCGGCAGCGTTCGCGTTCTT‑CGGGCATGGCGTTGGCGGTGAGGGCGACGATGGGCAACTCggg                                                                                                                  >  8:96582/1‑149 (MQ=255)                                      tGAAGGGCACCCAATGGTCGACCA‑GGGCCAGTAGCTCTTCGCGGCGGAATGGCTTGGCCAGGTAGTCGTTCATGCCCGCCGCCCGGCAGCGTTCGCGTTCTT‑CGGGCATGGCGTTGGCGGTGAGGGCGACGATGGGCAACTCGGGCCAg                                                                                                              >  1:381849/1‑149 (MQ=255)                                      tGAAGGGCACCCAATGGTCGACCA‑GGGCCAGTAGCTCTTCGCGGCGGAATGGCTTGGCCAGGTAGTCGTTCATGCCCGCCGCCCGCCAGCGTTCGCGTTCTT‑CGGGCATGGCGTTGGCCGTGAGGGCGACGATGGGCAACTCGGGCCac                                                                                                              >  7:166549/1‑148 (MQ=255)                                      tGAAGGGCACCCAATGGTCGACCA‑GGGCCAGTAGCTCTTCGCGGCGGAATGGCTTGGCCAGGTAGTCGTACATGCCCGCCGCCCGGCAGCGTTCGCGTTCTT‑CGGGCATGGCCTTGGCGGTGAGGGCGACGATGGGCAACTCGGGCCAg                                                                                                              >  6:205042/1‑149 (MQ=255)                                          gggCACCCAATGGTCGACCA‑GGGCCAGTAGCTCTTCGCGGCGGAATGGCTTGGCCAGGTAGTCGTTCATGCCCGCCGCCCGGCAGCGTTCGCGTTCTT‑CGGGCATGGCGTTGGCGGTGAGGGCGACGATGGGCAACTCGGGCCAGCGGc                                                                                                          >  2:354174/1‑149 (MQ=255)                                           ggCACCCAATGGTCGACCA‑GGGCCAGTAGCTCTTCGCGGCGGAATGGCTTGGCCAGGTAGTCGTTCATGCCCGCCGCCCGGCAGCGTTCGCGTTCTTACGGGCATGGCGTTGGCGGTGAGGGCGACGATGGGCAACTCGGGCCAGCGGc                                                                                                          <  1:95742/149‑1 (MQ=255)                                              aCCCAATGGTCGACCA‑GGGCCAGTAGCTCTTCGCGGCGGAATGGCTTGGCCAGGTAGTCGATCATGCCCGCCGCCCGGCAGCGTTCGCGTTCTT‑CGGGCATGGCGTTGGCGGTGAGGGCGACGATGGGCAACTCGGGCCAGCGGCCGCt                                                                                                      >  7:92706/1‑149 (MQ=255)                                               cccAATGGTCGACCA‑GGGCCAGTAGCTCTTCGCGGCGGAATGGCTTGGCCAGGTAGTCGTTCATGCCCGCCGCCCGGCAGCGTTCGCGTTCTT‑CGGGCATGGCGTTGGCGGTGAGGGCGACGATGGGCAACTCGGGCCAGCGGCCGc                                                                                                       <  3:2871/147‑1 (MQ=255)                                               cccAATGGTCGACCA‑GGGCCAGTAGCTCTTCGCGGCGGAATGGCTTGGCCAGGTAGTCGTTCATGCCCGCCGCCCGGCAGCGTTCGCGTTCTT‑CGGGCATGGCGTTGGCGGTGAGGGCGACGATGGGCAACTCGGGCCAGCGGCCGc                                                                                                       >  4:2871/1‑147 (MQ=255)                                                  aaTGGTCGACCA‑GGGCCAGTAGCTCTTCGCGGCGGAATGGCTTGGCCAGGTAGTCGTTCATGCCCGCCTCCCGGCAGCGTTCGCGTTCTT‑CGGGCATGGCGTTGGCGGTGAGGGCGACGATGGGCAACTCGGGCCAGCGGCCGCTTTgg                                                                                                  >  7:196688/1‑149 (MQ=255)                                                   aTGGTCGACCA‑GGGCCAGTAGCTCTTCGCGGCGGAATGGCTTGGCCAGGTAGTCGTTCATGCCCGCCGCCCGGCAGCGTTCGCGTTCTT‑CGGGCATGGCGTTGGCGGTGAGGGCGACGATGGGCAACTCGGGCCAGCGGCCGCTTTGGc                                                                                                 <  8:166549/149‑1 (MQ=255)                                                       tCGACCA‑GGGCCAGTAGCTCTTCGCGGCGGAATGGCTTGGCCAGGTAGTCGTTCATGCCCGCCGCCCGGCAGCGTTCGCGTTCTT‑CGGGCATGGCGTTGGCGGTGAGGGCGACGATGGGCAACTCGGGCCAGCGGCCGCTTTGGCGGa                                                                                              >  6:357785/1‑148 (MQ=255)                                                         gACCA‑GGGCCAGTAGCTCTTCGCGGCGGAATGGCTTGGCCAGGTAGTCGTTCATGCCCGCCGCCCGGCAGCGTTCGCGTTCTT‑CGGGCATGGCGTTGGCGGTGAGGGCGACGATGGGCAACTCGGGCCAGCGGCCGCTTTGGCGGATAc                                                                                           >  3:250009/1‑149 (MQ=255)                                                          aCCA‑GGGCCAGTAGCTCTTCGCGGCGGAATGGCTTGGCCAGGTAGTCGTTCATGCCCGCCGCCCGGCAGCGTTCGCGTTCTT‑CGGGCATGGCGTTGGCGGTGAGGGCGACGATGGGCAACTCGGGCCAGCGGCCGCTTTGGCGGATACg                                                                                          >  4:184910/1‑149 (MQ=255)                                                            cA‑GGGCCAGTAGCTCTTCGCGGCGGAATGGCTTGGCCAGGTAGTCGTTCATGCCCGCCGCCCGGCAGCGTTCGCGTTCTT‑CGGGCATGGCGTTGGCGGTGAGGGCGACGATGGGCAACTCGGGCCAGCGGCCGCTTTGGCGGATACGcc                                                                                        >  6:242814/1‑149 (MQ=255)                                                               gggCCAGTAGCTCTTCGCGGCGGAATGGCTTGGCCAGGTAGTCGTTCATGCCCGCCGCCCGGCAGCGTTCGCGTTCTT‑CGGGCATGGCGTTGGCGGTGAGGGCGACGATGGGCAACTCGGGCCAGc                                                                                                             <  6:298651/126‑1 (MQ=255)                                                               gggCCAGTAGCTCTTCGCGGCGGAATGGCTTGGCCAGGTAGTCGTTCATGCCCGCCGCCCGGCAGCGTTCGCGTTCTT‑CGGGCATGGCGTTGGCGGTGAGGGCGACGATGGGCAACTCGGGCCAGc                                                                                                             >  5:298651/1‑126 (MQ=255)                                                                 gCCAGTAGCTCTTCGCGGCGGAATGGCTTGGCCAGGTAGTCGTTCATGCCCGCCGCCCGGCAGCGTTCGCGTTCTT‑CGGGCATGGCGTTGGCGGTGAGGGCGACGATGGGCAACTCGGGCCAGCGGCCGCTTTGGCGGATACGCCGGCt                                                                                    <  8:254411/149‑1 (MQ=255)                                                                         ctctTCGCGGCGGAATGGCTTGGCCAGGTAGTCGTTCATGCCCGCCGCCCGGCAGCGTTCGCGTTCTT‑CGGGCATGGCGTTGGCGGTGAGGGCGACGATGGGCAACTCGGGCCAGCGGCCGCTTTGGCGGATACGCCGGCTGGCCTCg                                                                             >  1:95640/1‑148 (MQ=255)                                                                            ttCGCGGCGGAATGGCTTGGCCAGGTAGTCGTTCATGCCCGCCGCCCGGCAGCGTTCGCGTTCTT‑CGGGCATGGCGTTGGCGGTGAGGGCGACGATGGGCAACTCGGGCCAGCGGCCGCTTTGGCGGATACGCCGGCTGGCCTCGTa                                                                           <  4:250009/147‑1 (MQ=255)                                                                            ttCGCGGCGGAATGGCTTGGCCAGGTAGTCGTTCATGCCCGCCGCCCGGCAGCGTTCGCGTTCTT‑CGGGCATGGCGTTGGCGGTGAGGGCGACGATGGGCAACTCGGGCCAGCGGCCGCTTTGGCGGATACGCCGGCTGGCCTCGTa                                                                           <  2:95640/147‑1 (MQ=255)                                                                              cgcgGCGGAATGGCTTGGCCAGGTAGTCGTTCATGCCCGCCGCCCGGCAGCGTTCGCGTTCTT‑CGGGCATGGCGTTGGCGGTGAGGGCGACGATGGGCAACTCGGGCCAGCGGCCGCTTTGGCGGATACGCCGGCTGGCCTCGTAGcc                                                                        <  5:220198/148‑1 (MQ=255)                                                                              cgcgGCGGAATGGCTTGGCCAGGTAGTCGTTCATGCCCGCCGCCCGGCAGCGTTCGCGTTCTT‑CGGGCATGGCGTTGGCGGTGAGGGCGACGATGGGCAACTCGGGCCAGCGGCCGCTTTGGCGGATACGCCGGCTGGCCTCGTAGc                                                                         <  1:354174/147‑1 (MQ=255)                                                                              cgcgGCGGAATGGCTTGGCCAGGTAGTCGTTCATGCCCGCCGCCCGGCAGCGTTCGCGTTCTT‑CGGGCATGGCGTTGGCGGTGAGGGCGACGATGGGCAACTCGGGCCAGCGGCCGCTTTGGCGGATACGCCGGCTGGCCTCGTAGc                                                                         <  2:72178/147‑1 (MQ=255)                                                                               gcggcgGAATGGCTTGGCCAGGTAGTCGTTCATGCCCGCCGCCCGGCAGCGTTCGCGTTCTT‑CGGGCATGGCGTTGGCGGTGAGGGCGACGATGGGCAACTCGGGCCAGCGGCCGCTTTGGCGGATACGCCGGCTGGCCTCGTAGCCg                                                                       <  5:242814/148‑1 (MQ=255)                                                                                cggcggAATGGCTTGGCCAGGTAGTCGTTCATGCCCGCCGCCCGGCAGCGTTCGCGTTCTT‑CGGGCATGGCGTTGGCGGTGAGGGCGACGATGGGCAACTCGGGCCAGCGGCCGCTTTGGCGGATACGCCGGCTGGCCTCGTAGCCGTc                                                                     <  4:107427/149‑1 (MQ=255)                                                                                 ggcggAATGGCTTGGCCAGGTAGTCGTTCATGCCCGCCGCCCGGCAGCGTTCGCGTTCTT‑CGGGCATGGCGTTGGCGGTGAGGGCGACGATGGGCAACTCGGGCCAGCGGCCGCTTTGGCGGATACGCCGGCTGGCCTCGTAGCCGTcc                                                                    <  2:124371/149‑1 (MQ=255)                                                                                    ggAATGGCTTGGCCAGGTAGTCGTTCATGCCCGCCGCCCGGCAGCGTTCGCGTTCTT‑CGGGCATGGCGTTGGCGGTGAGGGCGACGATGGGCAACTCGGGCCAGCGGCCGCTTTGGCGGATACGCCGGCTGGCCTCGTAGCCGTCCATc                                                                 >  5:45332/1‑149 (MQ=255)                                                                                       aTGGCTTGGCCAGGTAGTCGTTCATGCCCGCCGCCCGGCAGCGTTCGCGTTCTT‑CGGGCATGGCGTTGGCGGTGAGGGCGACGATGGGCAACTCGGGCCAGCGGCCGCTTTGGCGGATACGCCGGCTGGCCTCGTAGCCGTCCATCAcc                                                              >  7:187903/1‑149 (MQ=255)                                                                                          gCTTGGCCAGGTAGTCGTTCATGCCCGCCGCCCGGCAGCGTTCGCGTTCTT‑CGGGCATGGCGTTGGCGGTGAGGGCGACGATGGGCAACTCGGGCCAGCGGCCGCTTTGGCGGATACGCCGGCTGGCCTCGTAGCCGTCCATCACCgg                                                            >  4:13086/1‑148 (MQ=255)                                                                                          gCTTGGCCAGGTAGTCGTTCATGCCCGCCGCCCGGCAGCGTTCGCGTTCTT‑CGGGCATGGCGTTGGCGGTGAGGGCGACGATGGGCAACTCGGGCCAGCGGCCGCTTTGGCGGATACGCCGGCTGGCCTCGTAGCCGTCCATCACCgg                                                            >  6:93898/1‑148 (MQ=255)                                                                                              ggCCAGGTAGTCGTTCATGCCCGCCGCCCGGCAGCGTTCGCGTTCTT‑CGGGCATGGCGTTGGCGGTGAGGGCGACGATGGGCAACTCGGGCCAGCGGCCGCTTTGGCGGATACGCCGGCTGGCCTCGTAGCCGTCCATCACCGGCATg                                                        <  2:61298/148‑1 (MQ=255)                                                                                                 cAGGTAGTCGTTCATGCCCGCCGCCCGGCAGCGTTCGCGTTCTT‑CGGGCATGGCGTTGGCGGTGAGGGCGACGATGGGCAACTCGGGCCAGCGGCCGCTTTGGCGGATACGCCGGCTGGCCTCGTAGCCGTCCATCACCGGCATGTTg                                                     >  2:191034/1‑148 (MQ=255)                                                                                                  aGGTAGTCGTTCATGCCCGCCGCCCGGCAGCGTTCGCGTTCTT‑CGGGCATGGCGTTGGCGGTGAGGGCGACGATGGGCAACTCGGGCCAGCGGCCGCTTTGGCGGATACGCCGGCTGGCCTCGTAGCCGTCCATCACCGGCATGTTGCa                                                   <  7:96582/149‑1 (MQ=255)                                                                                                          gTTCATGCCCGCCGCCCGGCAGCGTTCGCGTTCTT‑CGGGCATGGCGTTGGCGGTGAGGGCGACGATGGGCAACTCGGGCCAGCGGCCGCTTTGGCGGATACGCCGGCTGGCCTCGTAGCCGTCCATCACCGGCATGTTGCAGTCCAt                                             >  4:338780/1‑147 (MQ=255)                                                                                                           ttCATGCCCGCCGCCCGGCAGCGTTCGCGTTCTT‑CGGGCATGGCGTTGGCGGTGAGGGCGACGATGGGCAACTCGGGCCAGCGGCCGCTTTGGCGGATACGCCGGCTGGCCTCGTAGCCGTCCATCACCGGCATGTTGCAGTCCATCAg                                          >  5:107264/1‑149 (MQ=255)                                                                                                           ttCATGCCCGCCGCCCGGCAGCGTTCGCGTTCTT‑CGGGCATGGCGTTGGCGGTGAGGGCGACGATGGGCAACTCGGGCCAGCGGCCGCTTTGGCGGATACGCCGGCTGGCCTCGTAGCCGTCCATCACCGGCATGTTGCAGTCCATCAg                                          >  4:209788/1‑149 (MQ=255)                                                                                                              catgcccgaagaacgcgaacgctgccgggcggcgggcatgGCGTTGGCGGTGAGGGCGACGATGGGCAACTCGGGCCAGCGGCCGCTTTGGCGGATACGCCGGCTGGCCTCGTAGCCGTCCATCACCGGCATGTTGCAGTCCATCAGCa                                        >  4:80075‑M2/41‑149 (MQ=255)                                                                                                              ATGCCCGCCGCCCGGCAGCGTTCGCGTTCTT‑CGGGCATGGCGTTGGCGGTGAGGGCGACGATGGGCAACTCGGGCCAGCGGCCGCTTTGGCGGATACGCCGGCTGGCCTCGTAGCCGTCCATCACCGGCATGTTGCAGTCCATCAGCAc                                       <  8:11414‑M1/149‑1 (MQ=255)                                                                                                              ATGCCCGCCGCCCGGCAGCGTTCGCGTTCTT‑CGGGCATGGCGTTGGCGGTGAGGGCGACGATGGGCAACTCGGGCCAGCGGCCGCTTTGGCGGATACGCCGGCTGGCCTCGTAGCCGTCCATCACCGGCATGTTGCAGTCCATCAGCAc                                       <  2:104353‑M1/149‑1 (MQ=255)                                                                                                              ATGCCCGCCGCCCGGCAGCGTTCGCGTTCTT‑CGGGCATGGCGTTGGCGGTGAGGGCGACGATGGGCAACTCGGGCCAGCGGCCGCTTTGGCGGATACGCCGGCTGGCCTCGTAGCCGTCCATCACCGGCATGTTGCAGTCCATCAGCAc                                       >  2:381849‑M1/1‑149 (MQ=255)                                                                                                                GCCCGCCGCCCGGCAGCGTTCGCGTTCTT‑CGGGCATGGCGTTGGCGGTGAGGGCGACGATGGGCAACTCGGGCCAGCGGCCGCTTTGGCGGATACGCCGGCTGGCCTCGTAGCCGTCCATCACCGGCATGTTGCAGTCCATCAGCAc                                       <  2:162865‑M1/147‑1 (MQ=255)                                                                                                                 gcccgaagaacgcgaacgctgccgggcggcgggcatgGCGTTGGCGGTGAGGGCGACGATGGGCAACTCGGGCCAGCGGCCGCTTTGGCGGATACGCCGGCTGGCCTCGTAGCCGTCCATCACCGGCATGTTGCAGTCCATCAGCAc                                       >  6:75349‑M2/38‑147 (MQ=255)                                                                                                                  cccgaagaacgcgaacgctgccgggcggcgggcatgGCGTTGGCGGTGAGGGCGACGATGGGCAACTCGGGCCAGCGGCCGCTTTGGCGGATACGCCGGCTGGCCTCGTAGCCGTCCATCACCgg                                                            <  1:104289‑M2/89‑1 (MQ=255)                                                                                                                  cccgaagaacgcgaacgctgccgggcggcgggcatgGCGTTGGCGGTGAGGGCGACGATGGGCAACTCGGGCCAGCGGCCGCTTTGGCGGATACGCCGGCTGGCCTCGTAGCCGTCCATCACCgg                                                            >  2:104289‑M2/37‑125 (MQ=255)                                                                                                                  CCGCCGCCCGGCAGCGTTCGCGTTCTT‑CGGGCATGGCGTTGGCGGTGAGGGCGACGATGGGCAACTCGGGCCAGCGGCCGCTTTGGCGGATACGCCGGCTGGCCTCGTAGCCGTCCATCACCGGCATGTTGCAGTCCATCAGCACCAgg                                   <  1:337931‑M1/149‑1 (MQ=255)                                                                                                                  CCGCCGCCCGGCAGCGTTCGCGTTCTT‑CGGGCATGGCGTTGGCGGTGAGGGCGACAATGGGCAACTCGGGCCTGCGGCCGCTTTGGCGGATACGCCGGCTGGCCTCGTAGCCATCCATCACCGGCATGTTGCAGTCCATCAGCACCAgg                                   <  2:185538‑M1/149‑1 (MQ=255)                                                                                                                   CGCCGCCCGGCAGCGTTCGCGTTCTT‑CGGGCATGGCGTTGGCGGTGAGGGCGACGATGGGCAACTCGGGCCAGCGGCCGCTTTGGCGGATACGCCGGCTGGCCTCCTAGCCGTCCATCCCAGGCATGTAGCAGTCCATCAGCACCaggg                                  <  4:300208‑M1/149‑2 (MQ=255)                                                                                                                    GCCGCCCGGCAGCGTTCGCGTTCTT‑CGGGCATGGCGTTGGCGGTGAGGGCGACGATGGGCAACTCGGGCCAGCGGCCGCTTTGGCGGATACGCCGGCTGGCCTCGTAGCCGTCCATCACCGGCATGTTGCAGTCCATCAGCACCAGGTc                                 <  4:221856‑M1/149‑1 (MQ=255)                                                                                                                              aGCGTTCGCGTTCTT‑CGGGCATGGCGTTGGCGGTGAGGGCGACGATGGGCAACTCGGGCCAGCGGCCGCTTTGGCGGATACGCCGGCTGGCCTCGTAGCCGTCCATCACCGGCATGTTGCAGTCCATCAGCACCAGGTCGAATTCCTcg                       >  2:350601/1‑149 (MQ=255)                                                                                                                              aGCGTTCGCGTTCTT‑CGGGCATGGCGTTGGCGGTGAGGGCGACGATGGGCAACTCGGGCCAGCGGCCGCTTTGGCGGATACGCCGGCTGGCCTCGTAGCCGTCCATCACCGGCATGTTGCAGTCCATCAGCACCAGGTCGAATTCCTcg                       <  5:357785/149‑1 (MQ=255)                                                                                                                               gcgttcgcgttcTT‑CGGGCATGGCGTTGGCGGTGAGGGCGACGATGGGCAACTCGGGCCAGCGGCCGCTTTGGCGGATACGCCGGCTGGCCTCGTAGCCGTCCATCACCGGCATGTTGCAGTCCATCAGCACCAGGTCGAATTCCTcgc                      <  6:45332/149‑1 (MQ=255)                                                                                                                                 gttcgcgttcTT‑CGGGCATGGCGTTGGCGGTGAGGGCGACGATGGGCAACTCGGGCCAGCGGCCGCTTTGGCGGATACGCCGGCTGGCCTCGTAGCCGTCCATCACCGGCATGTTGCAGTCCATCAGCACCAGGTCGAATTCCTcgcgc                    >  4:256830/1‑149 (MQ=255)                                                                                                                                 gttcgcgttcTT‑CGGGCATGGCGTTGGCGGTGAGGGCGACGATGGGCAACTCGGGCCAGCGGCCGCTTTGGCGGATACGCCGGCTGGCCTCGTAGCCGTCCATCACCGGCATGTTGCAGTCCATCAGCACCAGGTCGAATTCCTcgcgc                    <  3:13086/149‑1 (MQ=255)                                                                                                                                  ttcgcgttcTT‑CGGGCATGGCGTTGGCGGTGAGGGCGACGATGGGCAACTCGGGCCAGCGGCCGCTTTGGCGGATACGCCGGCTGGCCTCGTAGCCGTCCATCACCGGCATGTTGCAGTCCATCAGCACCAGGTCGAATTCCTcgcgcg                   >  3:111929/1‑149 (MQ=255)                                                                                                                                     gcgttcTT‑CGGGCATGGCGTTGGCGGTGAGGGCGACGATGGGCAACTCGGGCCAGCGGCCGCTTTGGCGGATACGCCGGCTGGCCTCGTAGCCGTCCATCACCGGCATGTTGCAGTCCATCAGCa                                        <  5:220224/125‑1 (MQ=255)                                                                                                                                     gcgttcTT‑CGGGCATGGCGTTGGCGGTGAGGGCGACGATGGGCAACTCGGGCCAGCGGCCGCTTTGGCGGATACGCCGGCTGGCCTCGTAGCCGTCCATCACCGGCATGTTGCAGTCCATCAGCa                                        >  6:220224/1‑125 (MQ=255)                                                                                                                                     gcgttcTT‑CGGGCATGGCGTTGGCGGTGAGGGCGACGATGGGCAACTCGGGCCAGCGGCCGCTTTGGCGGATACGCCGGCTGGCCTCGTAGCCGTCCATCACCGGCATGTTGCAGTCCATCAGCACCAGGTCGACTTCCTCgcgcgc                  >  2:115593/1‑147 (MQ=255)                                                                                                                                          ctt‑cGGGCATGGCGTTGGCGGTGAGGGCGACGATGGGCAACTCGGGCCAGCGGCCGCTTTGGCGGATACGCCGGCTGGCCTCGTAGCCGTCCATCACCGGCATGTTGCAGTCCATCAGCACCAGGTCGAATTCCTCGCGCGCCagcagc           >  3:235018/1‑149 (MQ=255)                                                                                                                                              cgggcataGCGTTGGCGGTGAGGGCGACGATGGGCAACTCGGGCCAGCGGCCGCTTTGGCGGATACGCCGGCTGGCCTCGTAGCCGTCCATCACCGGCATGTTGCAGTCCATCAGCACCAGGTCGAATTCCTCGCGCGCCAGCAGCTc         >  8:160128‑M2/9‑148 (MQ=255)                                                                                                                                                    tgGCGTTGGCGGTGAGGGCGACGATGGGCAACTCGGGCCAGCGGCCGCTTTGGCGGATACGCCGGCTGGCCTCGTAGCCGTCCATCACCGGCATGTTGCAGTCCATCAGCACCAGGTCGAATTCCTCGCGCGCCAGCAGCTCAAGGGcc  <  3:256830‑M2/147‑1 (MQ=255)                                                                                                                                                      |                                                                                                                                                   GGCCCTGGAGGCGGACATCGAGCGTTTGCTCAGCCGCTGAAGGGCACCCAATGGTCGACCA‑GGGCCAGTAGCTCTTCGCGGCGGAATGGCTTGGCCAGGTAGTCGTTCATGCCCGCCGCCCGGCAGCGTTCGCGTTCTT‑CGGGCATGGCGTTGGCGGTGAGGGCGACGATGGGCAACTCGGGCCAGCGGCCGCTTTGGCGGATACGCCGGCTGGCCTCGTAGCCGTCCATCACCGGCATGTTGCAGTCCATCAGCACCAGGTCGAATTCCTCGCGCGCCAGCAGCTCAAGGGCC  >  NC_002947/2097503‑2097796

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.