New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 2293084 | 56 (0.900) | 4 (0.070) | 4/252 | NT | 7.8% | coding (1479/2400 nt) | PP_2019 | RND family multidrug transporter |
? | NC_002947 | = 2293146 | 41 (0.700) | coding (1541/2400 nt) | PP_2019 | RND family multidrug transporter |
CCTTCGCCGGTGGCCTGTGGTACAGCCAGAACCTGAAGATCGGCGACCTCGACCAGGGCGCACCGGAGCTGCGCCCCGACTCGCGCTACAACCAGGACAACAACTTCATCATCAGCAACTACTCGACCAGTTCCGATGTGCTGGTGATCATGGTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2292930‑2293084 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑catggtcCACATCAGCTCGTCGATCGGCGCCATGGTCGAGTGGACCGAGCACTTCTCCGACGGCGTCTTGACCATGATCACCAGCACATCGGAACTGGTCGAGTAGTTGCTGATGATGAAGTTGTTGTCCTGGTTGTAGCGCGAGTCGGGGCGC < NC_002947/2293146‑2293000 CCTTCGCCGGTGGCCTGTGGTACAGCCAGAACCTGAAGATCGGCGACCTCGACCAGGGCGCACCGGAGCTGCGCCCCGACTCGCGCTACAACCAGGACAACAACTTCATCATCAGCAACTACTCGACCAGTTCCGATGTGCTGGTGATC < 6:122417/149‑1 CGCCGGTGGCCTGTGGTACAGCCAGAACCTGAAGATCGGCGACCTCGACCAGGGCGCACCGGAGCTGCGCCCCGACTCGCGCTACAACCAGGACAACAACTTCATCATCAGCAACTACTCGACCAGTTCCGATGTGCTGGTGATCATG < 5:135948/148‑1 GCCGGTGGCCTGTGGTACAGCCAGAACCTGAAGATCGGCGACCTCGACCAGGGCGCACCGGAGCTGCGCCCCGACTCGCGCTACAACCAGGACAACAACTTCATCATCAGCAACTACTCGACCAGTTCCGATGTGCTGGTGATCATGG < 7:13638/148‑1 CCTGAAGATCGGCGACCTCGACCAGGGCGCACCGGAGCTGCGCCCCGACTCGCGCTACAACCAGGACAACAACTTCATCATCAGCAACTACTCGACCAGTTCCGATGTGCTGGTGATCATGGTC < 7:270098/124‑1 CCTGAAGATCGGCGACCTCGACCAGGGCGCACCGGAGCTGCGCCCCGACTCGCGCTACAACCAGGACAACAACTTCATCATCAGCAACTACTCGACCAGTTCCGATGTGCTGGTGATCATGGTC > 8:270098/1‑124 TGAAGATCGGCGACCTCGACCAGGGCGCACCGGAGCTGCGCCCCGACTCGCGCTACAACCAGGACAACAACTTCATCATCAGCAACTACTCGACCAGTTACGATGTGCTGGTGATCATGGTCCACATCAGCTCGTCGATCGGCGCCATG > 4:16655/1‑149 GCGCTACAACCAGGACAACAACTTCATCATCAGCAACTACTCGACCAGTTCCGATGTGCTGGTGATCATGGTCCACATCAGCTCGTCGATCGGCGCCATGGTCGAGTGGACCGAGCACTTCTCCGACGGCGTCTTGACCATGATCACCA < 3:16655/149‑1 TCAGCAACTACTCGACCAGTTCCGATGTGCTGGTGATCATGGTCCACATCAGCTCGTCGATCGGCGCCATGGTCGAGTGGACCGAGCACTTCTCCGACGGCGTCTTGACC > 3:29232/1‑110 TCAGCAACTACTCGACCAGTTCCGATGTGCTGGTGATCATGGTCCACATCAGCTCGTCGATCGGCGCCATGGTCGAGTGGACCGAGCACTTCTCCGACGGCGTCTTGACC < 4:29232/110‑1 CATGGTCCACATCAGCTCGTCGATCGGCGCCATGGTCGAGTGGACCGAGCACTTCTCCGACGGCGTCTTGACCATGATCACCAGCACATCGGAACTGGTCGAGTAGTTGCTGATGATGAAGTTGTTGTCCTGGTTGTAGCGCGAGTCG < 1:103044/148‑1 CATGGTCCACATCAGCTCGTCGATCGGCGCCATGGTCGAGTGGACCGAGCACTTCTCCGACGGCGTCTTGACCATGATCACCAGCACATCGGAACTGGTCGAGTAGTTGCTGATGATGAAGTTGTTGTCCTGGTTGTAGCGCGAGTCG < 1:165038/148‑1 GTCCACATCAGCTCGTCGATCGGCGCCATGGTCGAGTGGACCGAGCACTTCTCCGACGGCGTCTTGACCATGATCACCAGCACATCGGAACTGGTCGAGTAGTTGCTGATGATGAAGTTGTTGTCCTGGTTGTAGCGCGAGTCGGGGC < 1:93794/148‑1 TCCACATCAGCTCGTCGATCGGCGCCATGGTCGAGTGGACCGAGCACTTCTCCTACGGCGTCTTGACCATGATCACCAGCACATCGGAACTGGTCGAGTAGTTGCTGATGATGAAGTTGTTGTCCTGGTTGTAGCGCGAGTCGGGGCGC < 8:33965/149‑1 TCCACATCAGCTCGTCGATCGGCGCCATGGTCGAGTGGACCGAGCACTTCTCCGACGGCGTCTTGACCATGATCACCAGCACATCGGAACTGGTCGAGTAGTTGCTGATGATGAAGTTGTTGTCCTGGTTGTAGCGCGAGTCGGGGCGC < 1:357636/149‑1 CCTTCGCCGGTGGCCTGTGGTACAGCCAGAACCTGAAGATCGGCGACCTCGACCAGGGCGCACCGGAGCTGCGCCCCGACTCGCGCTACAACCAGGACAACAACTTCATCATCAGCAACTACTCGACCAGTTCCGATGTGCTGGTGATCATGGTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2292930‑2293084 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑catggtcCACATCAGCTCGTCGATCGGCGCCATGGTCGAGTGGACCGAGCACTTCTCCGACGGCGTCTTGACCATGATCACCAGCACATCGGAACTGGTCGAGTAGTTGCTGATGATGAAGTTGTTGTCCTGGTTGTAGCGCGAGTCGGGGCGC < NC_002947/2293146‑2293000 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |