| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 2390927 | 44 (0.710) | 4 (0.070) | 4/252 | NT | 8.7% | coding (1788/2238 nt) | rlmKL | 23S rRNA (guanine(2445)‑N(2))/(guanine(2069)‑N(7))‑ methyltransferase |
| ? | NC_002947 | = 2390951 | 42 (0.720) | coding (1812/2238 nt) | rlmKL | 23S rRNA (guanine(2445)‑N(2))/(guanine(2069)‑N(7))‑ methyltransferase | |||||
TTTCCAGGAAGTGAACGAAGGTGGCGTCAAGCTGCTGGTCAACCTCACCGACTACCTGGATACCGGGCTGTTCCTCGACCACCGCCCGATGCGTATGCGCATCCAGCGCGAGGCTGCCGGCAAGCGCTTCCTCAACCTGTTCTGCTACACCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2390774‑2390927‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caccgccCTTGGCCGCGTGCACGGTGGCCGTGGCGGTGTAGCAGAACAGGTTGAGGAAGCGCTTGCCGGCAGCCTCGCGCTGGATGCGCATACGCATCGGGCGGTGGTCGAGGAACAGCCCGGTATCCAGGTAGTCGGTGAGGTTGACCAGCAG < NC_002947/2390951‑2390805 TTTCCAGGAAGTGAACGAAGGTGGCGTCAAGCTGCTGGTCAACCTCACCGACTACCTGGATACCGGGCTGTTCCTCGACCACCGCCCGATGCGTATGCGCATCCAGCGCGAGGCTGCCGGCAAGCGCTTCCTCAACCTGTTCTGCTACA > 6:255309/1‑149 TCAACCTCACCGACTACCTGGATACCGGGCTGTTCCTCGACCACCGCCCGATGCGTATGCGCATCCAGCGCGAGGCTGCCGGCAAGCGCTTCCTCAACCTGTTCTGCTACACCGCCCTTGGCCGCGTGCACGGTGGCCGTGGCGGTGTA < 3:84795/149‑1 ACCTCACCGACTACCTGGATACCGGGCTGTTCCTCGACCACCGCCCGATGCGTATGCGCATCCAGCGCGAGGCTGCCGGCAAGCGCTTCCTCAACCTGTTCTGCTACACCGCCCTTGGCCGCGTGCACGGTGGCCGTGGCGGTGTAGCA < 3:225052/149‑1 CCTCACCGACTACCTGGCTACCGGGCTGTTCCTCGACCACCGCCCGATGCGTATGCGCATCCAGCGCGAGGCTGCCGGCAAGCGCTTCCTCAACCTGTTCTGCTACACCGCCCTTGGCCGCGTGCACGGTGGCCGTGGCGG < 4:77678/141‑1 CCTCACCGACTACCTGGATACCGGGCTGTTCCTCGACCACCGCCCGATGCGTATGCGCATCCAGCGCGAGGCTGCCGGCAAGCGCTTCCTCAACCTGTTCTGCTAAACCGCCCTTGGCCGCGTGCACGGTGGCCGTGGCGGTagatcgg > 3:77678/1‑142 ACCGCCCTTGGCCGCGTGCACGGTGGCCGTGGCGGTGTAGCAGAACAGGTTGAGGAAGCGCTTGCCGGCAGCCTCGCGCTGGATGCGCATACGCATCGGGCGGTGGTCGAGGAACAGCCCGGTATCCAGGTAGTCGGTGAGGTTGAC > 7:146727/1‑147 CGCCCTTGGCCGCGTGCACGGTGGCCGTGGCGGTGTAGCAGAACAGGTTGAGGAAGCGCTTGCCGGCAGCCTCGCGCTGGATGCGCATACGCATCGGGCGGTGGTCGAGGAACAGCCCGGTATCCAGGTAGTCGGTGAGGTTGACCAG > 6:378524/1‑148 CCCTTGGCCGCGTGCACGGTGGCCGTGGCGGTGTAGCAGAACAGGTTGAGGAAGCGCTTGCCGGCAGCCTCGCGCTGGATGCGCATACGCATCGGGCGGTGGTCGAGGAACAGCCCGGTATCCAGGTAGTCGGTGAGGTTGACCAGCAG < 1:378011/149‑1 TTTCCAGGAAGTGAACGAAGGTGGCGTCAAGCTGCTGGTCAACCTCACCGACTACCTGGATACCGGGCTGTTCCTCGACCACCGCCCGATGCGTATGCGCATCCAGCGCGAGGCTGCCGGCAAGCGCTTCCTCAACCTGTTCTGCTACACCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2390774‑2390927‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caccgccCTTGGCCGCGTGCACGGTGGCCGTGGCGGTGTAGCAGAACAGGTTGAGGAAGCGCTTGCCGGCAGCCTCGCGCTGGATGCGCATACGCATCGGGCGGTGGTCGAGGAACAGCCCGGTATCCAGGTAGTCGGTGAGGTTGACCAGCAG < NC_002947/2390951‑2390805 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |