New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 2390927 | 44 (0.710) | 4 (0.070) | 4/252 | NT | 8.7% | coding (1788/2238 nt) | rlmKL | 23S rRNA (guanine(2445)‑N(2))/(guanine(2069)‑N(7))‑ methyltransferase |
? | NC_002947 | = 2390951 | 42 (0.720) | coding (1812/2238 nt) | rlmKL | 23S rRNA (guanine(2445)‑N(2))/(guanine(2069)‑N(7))‑ methyltransferase |
GAAGTGAACGAAGGTGGCGTCAAGCTGCTGGTCAACCTCACCGACTACCTGGATACCGGGCTGTTCCTCGACCACCGCCCGATGCGTATGCGCATCCAGCGCGAGGCTGCCGGCAAGCGCTTCCTCAACCTGTTCTGCTACACCGCCACGGCCACCGTGCACGCGGCCAAGGGCGGTGCGCGC‑AGCACCACCAGCGTCGACCTGTCGAAAACCTACCTGGACTGGGCACGGCGTAACCTGGCGCTCAATGGCTATTCCGAGCGCAACCGCCTGGAGCAGAGCGATGTAATGAC > NC_002947/2390781‑2391073 | gAAGTGAACGAAGGTGGTGTCAAGCTGCTGGTCAACCTCACCGACTACCTGGATACCGGGCTGTTCCTCGACCACCGCCCGATGCGTATGCGCATCCAGCGCGAGGCTGCCGGCAAGCGCTTCCTCAACCTGTTCTGCTACACCGCCAc > 2:385467/1‑149 (MQ=255) gAACGAAGGTGGCGTCAAGCTGCTGGTCAACCTCACCGACTACCTGGATACCGGGCTGTTCCTCGACCACCGCCCGATGCGTATGCGCATCCAGCGCGAGGCTGCCGGCAAGCGCTTCCTCAACCTGTTCTGCTACACCGCCACGGCCa > 7:30780/1‑149 (MQ=255) aaGGTGGCGTCAAGCTGTTGGTCAACCTCACCGACTACCTGGATACCGGGCTGTTCCTCGACCACCGCCCGATGCGTATGCGCATCCAGCGCGAGGCTGCCGGCAAGCGCTTCCTCAACCTGTTCTGCTACACCGCCACGGCCACCGTg < 3:194612/149‑1 (MQ=255) gCGTCAAGCTGCTGGTCAACCTCACCGACTACCTGGATACCGGGCTGTTCCTCGACCACCGCCCGATGCGTATGCGCATCCAGCGCGAGGCTGCCGGCAAGCGCTTCCTCAACCTGTTCTGCTACACCGCCACGGCCACCGTGCAcgcg < 5:255309/149‑1 (MQ=255) cGTCAAGCTGCTGGTCAACTTCACCGACTACCTGGATACCGGGCTGTTCCTCGACCACCGCCCGATGCGTATGCGCATCCAGCGCGAGGCTGCCGGCAAGCGCTTCCTCAACCTGTTCTGCTACACCGCCACGGCCACCGTGCACGCgg > 1:61356/1‑149 (MQ=255) gTCAAGCTGCTGGTCAACCTCACCGACTACCTGGATACCGGGCTGTTCCTCGACCACCGCCCGATGCGTATGCGCATCCAGCGCGAGGCTGCCGGCAAGCGCTTCCTCAACCTGTTCTGCTACACCGCCACGGCCACCGTGCACGCGGc > 5:121374/1‑149 (MQ=255) ctgctgGTCAACCTCACCGACTACCTGGATACCGGGCTGTTCCTCGACCACCGCCCGATGCGTATGCGCATCCAGCGCGAGGCTGCCGGCAAGCGCTTCCTCAACCTGTTCTGCTACACCGCCACGGCCACCGTGCACGCGGCCAAGgg < 1:378011‑M2/149‑3 (MQ=255) ctgGTCAACCTCACCGACTACCTGGATACCGGGCTGTTCCTCGACCACCGCCCGATGCGTATGCGCATCCAGCGCGAGGCTGCCGGCAAGCGCTTCCTCAACCTGTTCTGCTACACCGCCACGGCCACCGTGCACGCGGCCAAGggcg > 6:378524‑M2/1‑144 (MQ=255) gTCAACCTCACCGACTACCTGGATACCGGGCTGTTCCTCGACCACCGCCCGATGCGTATGCGCATCCAGCGCGAGGCTGCCGGCAAGCGCTTCCTCAACCTGTTCTGCTACACCGCCACGGCCACCGTGCACGCGGCCAAGggcggt > 7:146727‑M2/1‑141 (MQ=255) tCAACCTCACCGACTACCTGGATACCGGGCTGTTCCTCGACCACCGCCCGATGCGTATGCGCATCCAGCGCGAGGCTGCCGGCAAGCGCTTCCTCAACCTGTTCTGCTACACCGCCcttggccgcgtgcacggtggccgtggcggtgta < 3:84795‑M1/149‑34 (MQ=255) tCAACCTCACCGACTACCTGGATACCGGGCTGTTCCTCGACCACCGCCCGATGCGTATGCGCATCCAGCGCGAGGCTGCCGGCAAGCGCTTCCTCAACCTGTTCTGCTACACCGCCACGGCCACCGTGCACGCGGCCAAGGGCGGTgcg > 5:291403/1‑149 (MQ=255) aCCTCACCGACTACCTGGATACCGGGCTGTTCCTCGACCACCGCCCGATGCGTATGCGCATCCAGCGCGAGGCTGCCGGCAAGCGCTTCCTCAACCTGTTCTGCTACACCGCCcttggccgcgtgcacggtggccgtggcggtgtagca < 3:225052‑M1/149‑37 (MQ=255) ccTCACCGACTACCTGGCTACCGGGCTGTTCCTCGACCACCGCCCGATGCGTATGCGCATCCAGCGCGAGGCTGCCGGCAAGCGCTTCCTCAACCTGTTCTGCTACACCGCCcttggccgcgtgcacggtggccgtggcgg < 4:77678‑M1/141‑30 (MQ=255) ccTCACCGACTACCTGGATACCGGGCTGTTCCTCGACCACCGCCCGATGCGTATGCGCATCCAGCGCGAGGCTGCCGGCAAGCGCTTCCTCAACCTGTTCTGCTAAACCGCCcttggccgcgtgcacggtggccgtggcggtagatcgg > 3:77678‑M1/1‑112 (MQ=255) aCCGACTACCTGGATACCGGGCTGTTCCTCGACCACCGCCCGATGCGTATGCGCATCCAGCGCGAGGCTGCCGGCAAGCGCTTCCTCAACCTGTTCTGCTACACCGCCACGGCCACCGTGCACGCGGCCAAGGGCGGTGCGCGC‑AGcac > 7:278898/1‑149 (MQ=255) ccTGGATACCGGGCTGTTCCTCGACCACCGCCCGATGCGTATGCGCATCCAGCGCGAGGCTGCCGGCAAGCGCTTCCTCAACCTGTTCTGCTACACCGCCACGGCCACCGTGCACGCGGCCAAGGGCGGTGCGCGC‑AGCACCACCAGCg > 3:335477/1‑149 (MQ=255) cTGGATACCGGGCTGTTCCTCGACCACCGCCCGATGCGTATGCGCATCCAGCGCGAGGCTGCCGGCAAGCGCTTCCTCACCCTGTTCTGCTACACCGCCACGGCCACCGTGCACGCGGCCAAGGGCGGTGCGCGC‑AGCACCACCAGCGt > 8:272382/1‑149 (MQ=255) cTGGATACCGGGCTGTTCCTCGACCACCGCCCGATGCGTATGCGCATCCAGCGCGAGGCTGCCGGCAAGCGCTTCCTCAACCTGTTCTGCTACACCGCCACGGCCACCGTGCACGCGGCCAAGGGCGGTGCGCGC‑AGCACCACCAGCGt > 6:215717/1‑149 (MQ=255) gATACCGGGCTGTTCCTCGACCACCGCCCGATGCGTATGCGCATCCAGCGCGAGGCTGCCGGCAAGCGCTTCCTCAACCTGTTCTGCTACACCGCCACGGCCACCGTGCACGCGGCCAAGGGCGGTGCGCGC‑AGCACCACCAGCGTCg < 8:180096/148‑1 (MQ=255) gATACCGGGCTGTTCCTCGACCACCGCCCGATGCGTATGCGCATCCAGCGCGAGGCTGCCGGCAAGCGCTTCCTCAACCTGTTCTGCTACACCGCCACGGCCACCGTGCACGCGGCCAAGGGCGGTGCGCGC‑AGCACCACCAGCGTCg > 7:180096/1‑148 (MQ=255) aCCGGGCTGTTCCTCGACCACCGCCCGAAGCGTATGCGCATCCAGCGCGACGCTGCCGGCAAGCGCTTCCTCAACCTGTTCTGCTACACCGCCACGGCCACCGTGCACGCGGCCAAGGGCGGTGCGCGC‑AGCACCACCAGCGTCGACCt > 5:214819/1‑149 (MQ=255) ttCCTCGACCACCGCCCGATGCGTATGCGCATCCAGCGCGAGGCTGCCGGCAAGCGCTTCCTCAACCTGTTCTGCTACACCGCCACGGCCACCGTGCACGCGGCCAAGGGCGGTGCGCGC‑AGCACCACCAGCGTCGACCTGTCGaaaa < 5:96278/148‑1 (MQ=255) tCGACCACCGCCCGATGCGTATGCGCATCCAGCGCGAGGCTGCCGGCAAGCGCTTCCTCAACCTGTTCTGCTACACCGCCACGGCCACCGTGCACGCGGCCAAGGGCGGTGCGCGC‑AGCACCACCAGCGTCGACCTGTCGAAAacctac > 3:353013/1‑149 (MQ=255) accGCCCGATGCGTATGCGCATCCAGCGCGAGGCTGCCGGCAAGCGCTTCCTCAACCTGTTCTGCTACACCGCCACGGCCACCGTGCACGCGGCCAAGGGCGGTGCGCGC‑AGCACCACCAGCGTCGACCTGTCGAAAACCTACCTGGAc < 6:121374/149‑1 (MQ=255) cGCCCGATGCGTATGCGCATCCAGCGCGAGGCTGCCGGCAAGCGCTTCCTCAACCTGTTCTGCTACACCGCCACGGCCACCGTGCACGCGGCCAAGGGCGGTGCGCGC‑AGCACCACCAGCGTCGACCTGTCGAAAACCTACCTGGACTg < 4:353013/149‑1 (MQ=255) aTGCGTATGCGCATCCAGCGCGAGGCTGCCGGCAAGCGGTTCCTCAACCTGTTCTGCTACAACGCCACGGCCACCGTGCACGCGGCCAAGGGCGGTTCGCGC‑AGCACCACCAGCGTCGACCTGTCGAAAACCTACCTGGACTGGGCACg > 3:117050/1‑149 (MQ=255) aTGCGTATGCGCATCCAGCGCGAGGCTGCCGGCAAGCGCTTCCTCAACCTGTTCTGCTACACCGCCACGGCCACCGTGCACGCGGCCAAGGGCGGTGCGCGC‑AGCACCACCAGCGTCGACCTGTCGAAAACCTACCTGGACTGGGCACg < 1:385467/149‑1 (MQ=255) tGCGCATCCAGCGCGAGGCTGCCGGCAAGCGCTTCCTCAACCTGTTCTGCTACACCGCCACGGCCACGGTGCACGCGGCCAAGGGCGGTGCGCGC‑AGCACCACCAGCGTCGACCTGTCGAAAACCTACCTGGACTGGGCACGGCGTAAc < 6:214819/149‑1 (MQ=255) gcATCCAGCGCGAGGCTGCCGGCAAGCGCTTCCTCACCCTGTTCTGCTACACCGCCACGGCCACCGTGCACGCGGCCAAGGGCGGTGCGCGC‑AGCACCACCAGCGTCGACCTGTCGAAAACCTACCTGGACTGGGCACGGCGTAACCTg < 7:272382/149‑1 (MQ=255) tCCAGCGCGAGGCTGCCGGCAAGCGCTTCCTCAACCTGTTCTGCTACACCGCCACGGCCACCGTGCACGCGGCCAAGGGCGGTGCGCGC‑AGCACCACCAGCGTCGACCTGTCGAAAACCTACCTGGACTGGGCACGGCGTAACCTGgcg > 7:118338/1‑149 (MQ=255) aGCGCGAGGCTGCCGGCAAGCGCTTCCTCAACCTGTTCTGCTACACCGCCACGGCCACCGTGCACGCGGCCAAGGGCGGTGCGCGC‑AGCACCACCAGCGTCGACCTGTCGAAAACCTACCTGGACTGGGCACGGCGTAACCTGGCGCt > 8:239384/1‑148 (MQ=255) cTGCCGGCAAGCGCTTCCTCAACCTGTTCTGCTACACCGCCACGGCCACCGTGCACGCGGCCAAGGGCGGTGCGCGC‑AGCACCACCAGCGTCGACCTGTCGAAAACCTACCTGGACTGGGCACGGCGTAACCTGGCGCTCAATGGCTAt > 4:320238/1‑149 (MQ=255) ccGGCAAGCGCTTCCTCAACCTGTTCTGCTACACCGCCACGGCCACCGTGCACGCGGCCAAGGGCGGTGCGCGC‑AGCACCACCAGCGTCGACCTGTCGAAAACCTACCTGGACTGGGCACGGCGTAACCTGGCGCTCAATGGCTATTcc > 5:15659/1‑149 (MQ=255) ccGGCAAGCGCTTCCTCAACCTGTTCTGCTACACCGCCACGGCCACCGTGCACGCGGCCAAGGGCGGTGCGCGC‑AGCACCACCAGCGTCGACCTGTCGAAAACCTACCTGGACTGGGCACGGCGTAACCTGGCGCTCAATGGCTATTcc < 8:30780/149‑1 (MQ=255) cAAGCGCTTCCTCAACCTGTTCTGCTACACCGCCACGGCCACCGTGCACGCGGCCAAGGGCGGTGCGCGC‑AGCACCACCAGCGTCGACCTGTCGAAAACCTACCTGGACTGGGCACGGCGTAACCTGGCGCTCAATGGCTATTCCGAgc < 5:215717/149‑1 (MQ=255) cAAGCGCTTCCTCAACCTGTTCTGCTACACCGCCACGGCCACCGTGCACGCGGCCAAGGGCGGTGCGCGC‑AGCACCACCAGCGTCGACCTGTCGAAAACCTACCTGGACTGGGCACGGCGTAACCTGGCGCTCAATGGCTATTCCGAgc < 6:291403/149‑1 (MQ=255) gcgcTTCCTCAACCTGTTCTGCTACACCGCCACGGCCACCGTGCACGCGGCCAAGGGCGGTGCGCGC‑AGCACCACCAGCGTCGACCTGTCGAAAACCTACCTGGACTGGGCACGGCGTAACCTGGCGCTCAATGGCTATTCCGAgcgc > 8:220578/1‑148 (MQ=255) ccTCAACCTGTTCTGCTACACCGCCACGGCCACCGTGCACGCGGCCAAGGGCGGTGCGCGC‑AGCACCACCAGCGTCGACCTGTCGAAAACCTACCTGGACTGGGCACGGCGTAACCTGGCGCTCAATGGCTATTCCGa < 8:113435/138‑1 (MQ=255) ccTCAACCTGTTCTGCTACACCGCCACGGCCACCGTGCACGCGGCCAAGGGCGGTGCGCGC‑AGCACCACCAGCGTCGACCTGTCGAAAACCTACCTGGACTGGGCACGGCGTAACCTGGCGCTCAATGGCTATTCCGa > 7:113435/1‑138 (MQ=255) ccTCAACCTGTTCTGCTACACCGCCACGGCCACCGTGCACGCGGCCAAGGGCGGTGCGCGC‑AGCACCACCAGCGTCGACCTGTCGAAAACCTACCTGGACTGGGCACGGCGTAACCTGGCGCTCAATGGCTATTCCGAGCGCAACCGcc > 1:199972/1‑149 (MQ=255) tCAACCTGTTCTGCTACACCGCCACGGCCACCGTGCACGCGGCCAAGGGCGGTGCGCGC‑AGCACCACCAGCGTCGACCTGTCGAAAACCTACCTGGACTGGGCACGGCGTAACCTGGCGCTCAATGGCTATTCCGAGCGCAACCGCCTg > 2:94093/1‑149 (MQ=255) tCAACCTGTTCTGCTACACCGCCACGGCCACCGTGCACGCGGCCAAGGGCGGTGCGCGC‑AGCACCACCAGCGTCGACCTGTCGAAAACCTACCTGGACTGGGCACGGCGTAACCTGGCGCTCAATGGCTATTCCGAGCGCAACCGCCTg > 4:268266/1‑149 (MQ=255) aaCCTGTTCTGCTACACCGCCACGGCCACCGTGCACGCGGCCAAGGGCGGTGCGCGC‑AGCACCACCAGCGTCGACCTGTCGAAAACCTACCTGGACTGGGCACGGCGTAACCTGGCGCTCAATGGCTATTCCGAGCGCAACCGCCTg > 7:73238/1‑147 (MQ=255) aaCCTGTTCTGCTACACCGCCACGGCCACCGTGCACGCGGCCAAGGGCGGTGCGCGC‑AGCACCACCAGCGTCGACCTGTCGAAAACCTACCTGGACTGGGCACGGCGTAACCTGGCGCTCAATGGCTATTCCGAGCGCAACCGCCTg < 8:118338/147‑1 (MQ=255) aaCCTGTTCTGCTACACCGCCACGGCCACCGTGCACGCGGCCAAGGGCGGTGCGCGC‑AGCACCACCAGCGTCGACCTGTCGAAAACCTACCTGGACTGGGCACGGCGTAACCTGGCGCTCAATGGCTATTCCGAGCGCAACCGCCTg > 7:78477/1‑147 (MQ=255) tGTTCTGCTACACCGCCACGGCCACCGTGCACGCGGCCAAGGGCGGTGCGCGCTTGCACCACCAGCGTCGACCTGTCGAAAACCTACCTGGACTGGGCACGGCGTAACCTGGCGCTCAATGGCTATTCCGAGCGCAACCGCCTGGAg > 1:101258/1‑147 (MQ=255) ttCTGCTACACCGCCACGGCCACCGTGCACGCGGCCAAGGGCGGTGCGCGC‑AGCACCACCAGCGTCGACCTGTAGAAAACCTACCTGGACTGGGCACGGCGTAACCTGGCGCTCAATGTCTATTCCGAGCGCAACCGCCTGGAGCagag < 6:35617/149‑1 (MQ=255) ccgatctaccgccacgGCCACCGTGCACGCGGCCAAGggcggtttagcagaacaggttgaggaagcgcttgccggcagcctcgcgctggatgcgcatacgcatcgggcggtggtcgaggaacagcccggtatccaggtagtcggtgagg > 3:77678‑M2/8‑37 (MQ=255) tGCTACACCGCCACGGCCACCGTGCACGCGGCCAAGggcggtgtagcagaacaggttgaggaagcgcttgccggcagcctcgcgctggatgcgcatacgcatcgggcggtggtcgaggaacagcccggtatccaggtagtcggtgaggt < 3:225052‑M2/149‑114 (MQ=255) cTACACCGCCACGGCCACCGTGCACGCGGCCAAGGGCGGTGCGCGC‑AGCACCACCAGCGTCGACCTGTCGAAAACCTACCTGGACTGGGCACGGCGTAACCTGGCGCTCAATGGCTATTCCGAGCGCAACCGCCTGGAGCAGAGCGATg < 3:73955/149‑1 (MQ=255) tACACCGCCACGGCCACCGTGCACGCGGCCAAGggcggtgtagcagaacaggttgaggaagcgcttgccggcagcctcgcgctggatgcgcatacgcatcgggcggtggtcgaggaacagcccggtatccaggtagtcggtgaggttga < 3:84795‑M2/149‑117 (MQ=255) tACACCGCCACGGCCACCGTGCACGCGGCCAAGGGCGGTGCGCGC‑AGCACCACCAGCGTCGACCTGTCGAAAACCTACCTGGACTGGGCACGGCGTAACCTGgcg > 8:77765/1‑105 (MQ=255) tACACCGCCACGGCCACCGTGCACGCGGCCAAGGGCGGTGCGCGC‑AGCACCACCAGCGTCGACCTGTCGAAAACCTACCTGGACTGGGCACGGCGTAACCTGgcg < 7:77765/105‑1 (MQ=255) tACACCGCCACGGCCACCGTGCACGCGGCCAAGGGCGGTGCGCGC‑AGCACCACCAGCGTCGACCTGTCGAAAACCTACCTGGACTGGGCACGGCGTAACCTGGCGCTCAATGGCTATTCCGAGCGCAACCGCCTGGAGCAGAGCGATg > 3:267883/1‑148 (MQ=255) acCGCCcttggccgcgtgcacggtggccgtggcggtgtagcagaacaggttgaggaagcgcttgccggcagcctcgcgctggatgcgcatacgcatcgggcggtggtcgaggaacagcccggtatccaggtagtcggtgaggttgac > 7:146727‑M1/1‑6 (MQ=255) acCGCCACGGCCACCGTGCACGCGGCCAAGGGCGGTGCGCGC‑AGCACCACCAGCGTCGACCTGTCGAAAACCTACCTGGACTGGGCACGGCGTAACCTGGCGCTCAATGGCTATTCCGAGCGCAACCGCCTGGAGCAGAGCGATGTAAt < 4:335477/149‑1 (MQ=255) ccGCCACGGCCACCGTGCACGCGGCCAAGggcggtgtagcagaacaggttgaggaagcgcttgccggcagcctcgcgctggatgcgcatacgcatcgggcggtggtcgaggaacagcccggtagccaggtagtcggtgagg < 4:77678‑M2/141‑113 (MQ=255) cGCCcttggccgcgtgcacggtggccgtggcggtgtagcagaacaggttgaggaagcgcttgccggcagcctcgcgctggatgcgcatacgcatcgggcggtggtcgaggaacagcccggtatccaggtagtcggtgaggttgaccag > 6:378524‑M1/1‑4 (MQ=255) cccttggccgcgtgcacggtggccgtggcggtgtagcagaacaggttgaggaagcgcttgccggcagcctcgcgctggatgcgcatacgcatcgggcggtggtcgaggaacagcccggtatccaggtagtcggtgaggttgaccagcag < 1:378011‑M1/149‑148 (MQ=255) | GAAGTGAACGAAGGTGGCGTCAAGCTGCTGGTCAACCTCACCGACTACCTGGATACCGGGCTGTTCCTCGACCACCGCCCGATGCGTATGCGCATCCAGCGCGAGGCTGCCGGCAAGCGCTTCCTCAACCTGTTCTGCTACACCGCCACGGCCACCGTGCACGCGGCCAAGGGCGGTGCGCGC‑AGCACCACCAGCGTCGACCTGTCGAAAACCTACCTGGACTGGGCACGGCGTAACCTGGCGCTCAATGGCTATTCCGAGCGCAACCGCCTGGAGCAGAGCGATGTAATGAC > NC_002947/2390781‑2391073 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |