New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2731942 =	47 (0.760)	3 (0.050)	3/252	NT	6.2%	coding (1279/2361 nt)	polB	DNA polymerase II
	?	NC_002947	2731986 =	47 (0.800)					coding (1323/2361 nt)	polB	DNA polymerase II

GCCCTGCCACACCCGTTCGACGATGGCTGGCAGGCAGTGCTGTGTGCGTGAAAACCGCCCACCGCGAAAGCCCTCGACCGAATGTGCGTCGTCAGGCTGGCGTAGGCCTTCGATCAGCCCGACCGGGTCGATGAGAAAGGTCCGGATGATCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2732094‑2731942 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgatcgaAGGCCTACGCCAGCCTGACGACGCACATTCGGTCGAGGGCTTTCG‑CGGTGG‑‑GCGGTTTTCACGCACACAGCACTGCCTGCCAGCCATCGTCGAACGGGTGTGGCAGGGCAGGGAAGCGGCCAAGCGCGAGGGCAATGCGCCGCTG  >  NC_002947/2731986‑2732130                                                                                                                                                                                                                                                                                                               GCCCTGCCACACCCGTTCGACGATGGCTGGCAGGCAGTGCTGTGTGCGTGAAAACCGCCCACCGCGAAAGCCCTCGACCGAATGTGCGTCGTCAGGCTGGCGTAGGCCTTCGATCAGCCCGACCGGGTCGATGAGAAAGGTCCGGATGA                                                                                                                                                          >  6:369851/1‑149  CCCTGCCACACCCGTTCGACGATGGCTGGCAGGCAGTGCTGTGTGCGTGAAAACCGCCCACCGCGAAAGCCCTCGACCGAATGTGCGTCGTCAGGCTGGCGTAGGCCTTCGATCAGCCCGACCGGGTCGATGAGAAAGGTCCGGATG                                                                                                                                                           <  2:20615/147‑1                                                                                                          gagTTCGATCAGCCCGACCGGGTCGATGAGAAAGGTCCGGATGATCGAAGGCCTACGCCAGCCTGACGACGCACATTCGGTCGAGGGCTTTCG‑CGGGGG‑‑GCGGTTTTCACGCACACAGCACTGCCTGCCAGCCATCGTCGAACGGGTGT                                              <  6:114425/146‑1                                                                                                              TCGATCAGCCCGACCGGGTCGATGAGAAAGGTCCGGATGATCGAAGGCCTACGCCAGCCTGACGACGCACATTCGGTCGAGGGCTTTCGCCGGTGG‑‑GCGGTTTTCACGCACACAGCACTGCCTGCCAGCCATCGTC                                                        <  1:86023/136‑1                                                                                                              TCGATCAGCCCGACCGGGTCGATGAGAAAGGTCCGGATGATCGAAGGCCTACGCCAGCCTGACGACGCACATTCGGTCGAGGGCTTTCG‑CGGTGG‑‑GCGGTTTTCACGCACACAGCACTGCCTGCCAGCCATCGTC                                                        >  2:86023/1‑135                                                                                                                                                     ATCGAAGGCCTACGCCAGCCTGACGACGCACATTCGGTCGAGGGCTTTCG‑CGGTGGGAGCGGTTTTCACGCACACAGCACTGCCTGCCAGCCATCGTCGAACGGGTGTGGCAGGGCAGGGAAGCGGCCAAGCGCGAGGGCAATGCGCCG     >  1:301501/1‑149                                                                                                                                                      TCGAAGGCCTACGCCAGCCTGACGACGCACATTCGGTCGAGGGCTTTCG‑CGGTGG‑‑GCGGTTTTCACGCACACAGCACTGCCTGCCAGCCATCGTCGAACGGGTGTGGCAGGGCAGGGAAGCGGCCAAGCGCGAGGGCAATGCGCCGCTG  <  3:343482/149‑1                                                                                                                                                                                                                                                                                                               GCCCTGCCACACCCGTTCGACGATGGCTGGCAGGCAGTGCTGTGTGCGTGAAAACCGCCCACCGCGAAAGCCCTCGACCGAATGTGCGTCGTCAGGCTGGCGTAGGCCTTCGATCAGCCCGACCGGGTCGATGAGAAAGGTCCGGATGATCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2732094‑2731942 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgatcgaAGGCCTACGCCAGCCTGACGACGCACATTCGGTCGAGGGCTTTCG‑CGGTGG‑‑GCGGTTTTCACGCACACAGCACTGCCTGCCAGCCATCGTCGAACGGGTGTGGCAGGGCAGGGAAGCGGCCAAGCGCGAGGGCAATGCGCCGCTG  >  NC_002947/2731986‑2732130

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.