New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 2731942 = | 47 (0.760) | 3 (0.050) | 3/252 | NT | 6.2% | coding (1279/2361 nt) | polB | DNA polymerase II |
? | NC_002947 | 2731986 = | 47 (0.800) | coding (1323/2361 nt) | polB | DNA polymerase II |
GGCAGCCGGCCGGACGAAGCCAGCCCCGGCGGGTTTGTCATGGATTCGCGGCCAGGGCTTTACGACTCGGTGCTGGTGCTGGACTACAAGAGCCTGTACCCGTCGATCATCCGGACCTTTCTCATCGACCCGGTCGGGCTGATCGAAGGCCTACGCCAGCCTGACGACGCACATTCGGTCGAGGGCTTTCG‑CGGTGG‑‑GCGGTTTTCACGCACACAGCACTGCCTGCCAGCCATCGTCGAACGGGTGTGGCAGGGCAGGGAAGCGGCCAAGCGCGAGGGCAATGCGCCGCTG > NC_002947/2731840‑2732130 | ggCAGCCGGCCGGACGAAGCCAGCCCCGGCGGGTTTGTCATGGATTCGCGGCCAGGGCTTTACGACTCGGTGCTGGTGCTGGACTACAAGAGCCTGTACCCGTCGATCATCCGGACCTTTCTCATCGACCCGGTCGGGCTGATCGaa < 1:225815/147‑1 (MQ=255) acacccgttcgacgatggctggcaggcagtgctgtgtgcgtgaaaaccgccccccgcgaaagccctcgaccgaatgtgcgtcgtcaggctggcgtaggcctTCGATCATCCGGACCTTTCTCATCGACCCGGTCGGGCTGAtcgaactc < 6:114425‑M1/48‑4 (MQ=255) ccggACGAAGCCAGCCCCGGCGGGTTTGTCATGGATTCGCGGCCAGGGCTTTACGACTCGGTGCTGGTGCTGGACTACAAGAGCCTGTACCCGTCGATCATCCGGACCTTTCTCATCGACCCGGTCGGGCTGATCGAAGGCCTACGCCa < 3:10407/149‑1 (MQ=255) gAAGCCAGCCCCGGCGGGTTTGTCATGGATTCGCGGCCAGGGCTTTACGACTCGGTGCTGGTGCTGGACTACAAGAGCCTGTACCCGTCGATCATCCGGACCTTTCTCATCGACCCGGTCGGGCTGATCGAAGGCCTACGCCAGCCTga > 4:256674/1‑149 (MQ=255) cagccCCGGCGGGTTTGTCATGGATTCGCGGCCAGGGCTTTACGCCTCGGTGCTGGTGCTGGACTACAAGAGCCTGTACCCGTCGATCATCCGGACCTTTCTCATCGACCCGGTCGGGCTGATCGAAGGCCGACGCCAGCCTGacgacg > 4:36001/1‑149 (MQ=255) cagccCCGGCGGGTTTGTCATGGATTCGCGGCCAGGGCTTTACGACTCGGTGCTGGTGCTGGACTACAAGAGCCTGTACCCGTCGATCATCCGGCCCTTTCTCATCGACCCGGTCGGGCTGATCGAAGGCCTACGCCAGCCTGacgacg > 2:135568/1‑149 (MQ=255) cagccCCGGCGGGTTTGTCATGGATTCGCGGCCAGGGCTTTACGACTCGGTGCTGGTGCTGGACTACAAGAGCCTGTACCCGTCGATCATCCGGACCTTTCTCATCGACCCGGTCGGGCTGATCGAAGGCCTACGCCAGCCTGacgacg < 3:50362/149‑1 (MQ=255) agccCCGGCGGGTTTGTCATGGATTCGCGGCCAGGGCTTTACGACTCGGTGCTGGTGCTGGACTACAAGAGCCTGTACCCGTCGATCATCCGGACCTTTCTCATCGACCCGGTCGGGCTGATCGAAGGCCTACGCCAGCCTGacgacg > 2:363727/1‑148 (MQ=255) ggTTTGTCATGGATTCGCGGCCAGGGCTTTACGACTCGGTGCTGGTGCTGGACTACAAGAGCCTGTACCCGTCGATCATCCGGACCTTTCTCATCGACCCGGTCGGGCTGATCGAAGGCCTACGCCAGCCTGACGACGCACATTCGGTc > 6:115418/1‑149 (MQ=255) tCATGGATTCGCGGCCAGGGCTTTACGACTCGGTGCTGGTGCTGGACTACAAGAGCCTGTACCCGTCGATCATCCGGACCTTTCTCATCGACCCGGTCGGGCTGATCGAAGGCCTACGCCAGCCTGACGACGCACATTCGGTCGAGGGc > 5:369851/1‑149 (MQ=255) aTGGATTCGCGGCCAGGGCTTTACGACTCGGTGCTGGTGCTGGACTACAAGAGCCTGTACCCGTCGATCATCCGGACCTTTCTCATCGACCCGGTCGGGCTGATCGAAGGCCTACGCCAGCCTGACGACGCACATTCgg < 7:198856/139‑1 (MQ=255) aTGGATTCGCGGCCAGGGCTTTACGACTCGGTGCTGGTGCTGGACTACAAGAGCCTGTACCCGTCGATCATCCGGACCTTTCTCATCGACCCGGTCGGGCTGATCGAAGGCCTACGCCAGCCTGACGACGCACATTCgg > 8:198856/1‑139 (MQ=255) ccAGGGCTTTACGACTCGGTGCTGGTGCTGGACTACAAGAGCCTGTACCCGTCGATCATCCGGACCTTTCTCATCGACCCGGTCGGGCTGATCGAAGGCCTACGCCAGCCTGACGACGCACATTCGGTCGAGGGCTTTCG‑CGGTg < 1:339287/145‑1 (MQ=255) ccAGGGCTTTACGACTCGGTGCTGGTGCTGGACTACAAGAGCCTGTACCCGTCGATCATCCGGACCTTTCTCATCGACCCGGTCGGGCTGATCGAAGGCCTACGCCAGCCTGACGACGCACATTCGGTCGAGGGCTTTCG‑CGGTg > 2:339287/1‑145 (MQ=255) ctgtACGACGCGGTGCTGGTGCTGGACTACAAGAGCCTGTACCCGTCGATCATCCGCTCCTTTCTCATCGACCCGGTCGGGCTGATGGAAGGCCTACGCCAGCCTGACGACGCACATTCGGGCGAGGGCTTTCG‑CGGTGG‑‑GCGGTTTTc < 2:310164/146‑1 (MQ=255) tttACGACTCGGTGCTGGTGCTGGACTACAAGAGCCTGTACCCGTCGATCATCCGGACCTTTCTCATCGACCCGGTCGGGCTGATCGAAGGCCTACGCCAGCCTGACGACGCACATTCGGTCGAGGGCTTTCG‑CGGTGG‑‑GCGGTTTTCa > 2:359678/1‑149 (MQ=255) taggtcTCGGTTCTGGTGCTGGACTAGAAGAGCCTGTACCCGTCGATCATCCGGACCTTTCTCATCGTCCCGGTCGGGCTTATCGAAGGCCTACGCCAGCCTGACGACGCAGATTCGGTCGAGGGCTTTCG‑CGGTGG‑‑GCGGTTTTc < 1:346671/141‑1 (MQ=255) tACGACTCGGTGCTGGTGCTGGACTACAAGAGCCTGTACCCGTCGATCATCCGGACCTTTCTCATCGACCCGGTCGGGCTGATCGAAGGCCTACGCCAGCCTGACGACGCACATTCGGTCGAGGGCTTTCG‑CGGTGG‑‑GCGGTTTTCa < 1:363727/147‑1 (MQ=255) tACGACTCGGTGCTGGTGCTGGACTACAAGAGCCTGTACCCGTCGATCATCCGGACCTTTCTCATCGACCCGGTCGGGCTGATCGAAGGCCTACGCCAGCCTGACGACGCACATTCGGTCGAGGGCTTTCG‑CGGTGG‑‑GCGGTTTTCACg > 3:52376/1‑149 (MQ=255) aCGACTCGGTGCTGGTGCTGGACTACAAGAGCCTGTACCCGTCGATCATCCGGACCTTTCTCATCGACCCGGTCGGGCTGATCGAAGGCCTACGCCAGCCTGACGACGCACATTCGGTCGAGGGCTTTCG‑CGGTGG‑‑GCGGTTTTCACg < 3:337199/148‑1 (MQ=255) gtgctggtgctgGACTACAAGAGCCTGTACCCGTCGATCATCCGGACCTTTCTCATCGACCCGGTCGGGCTGATCGAAGGCCTACGCCAGCCTGACGACGCACATTCGGTCGAGGGCTTTCG‑CGGTGG‑‑GCGGTTTTCACGCACACAGCa > 3:336374/1‑149 (MQ=255) gctggtgctggACTACAAGAGCCTGTACCCGTCGATCATCCGGACCTTTCTCATCGACCCGGTCGGGCTGATCGAAGGCCTACGCCAGCCTGACGACGCACATTCGGTCGAGGGCTTTCG‑CGGTGG‑‑GCGGTTTTCACGCACACAGCAct > 4:244492/1‑149 (MQ=255) ggACTACAAGAGCCTGTACCCGTCGATCATCCGGACCTTTCTCATCGACCCGGTCGGGCTGATCGAAGGCCTACGCCAGCCTGACGACGCACATTCGGTCGAGGGCTTTCG‑CGGTGG‑‑GCGGTTTTCACGCACACAGCACTGCCTgccag > 5:157650/1‑149 (MQ=255) tACAAGAGCCTGTACCCGTCGATCATCCGGACCTTTCTCATCGACCCGGTCGGGCTGATCGAAGGCCTACGCCAGCCTGACGACGCACATTCGGTCGAGGGCTTTCG‑CGGTGG‑‑GCGGTTTTCACGCACACAGCACTGCCTGCCAGCCAt > 5:179282/1‑149 (MQ=255) tACAAGAGCCTGTACCCGTCGATCATCCGGACCTTTCTCATCGACCCGGTCGGGCTGATCGAAGGCCTACGCCAGCCTGACGACGCACATTCGGTCGAGGGCTTTCG‑CGGTGG‑‑GCGGTTTTCACGCACACAGCACTGCCTGCCAGCCAt > 6:68617/1‑149 (MQ=255) tACAAGAGCCTGTACCCGTCGATCATCCGGACCTTTCTCATCGACCCGGTCGGGCTGATCGAAGGCCTACGCCAGCCTGACGACGCACATTCGGTCGAGGGCTTTCG‑CGGTGG‑‑GCGGTTTTCACGCACACAGCACTGCCTGCCAGCCAt > 4:343482/1‑149 (MQ=255) tACAAGAGCCTGTACCCGTCGATCATCCGGACCTTTCTCATCGACCCGGTCGGGCTGATCGAAGGCCTACGCCAGCCTGACGACGCACATTCGGTCGAGGGCTGTCG‑CGGTGG‑‑GCGGTTTTCACGCCCACAGCACTGCCTGCCAGCCAt > 8:129235/1‑149 (MQ=255) catctccTGTACCCGGCGATCATCCGGACCTTTCTCATCGACCCGGTCGGGCTGATCGAAGGCCTACGCCAGCCTGACGACGCACATTCGGTCGAGGGCTTTCG‑CGGTGG‑‑GCGGTTTTCACGCACACAGCACTGCCTGCCAGCCAtcgt < 1:292589/144‑1 (MQ=255) aaGAGCCTGTACCCGTCGATCATCCGGACCTTTCTCATCGACCCGGTCGGGCTGATCGAAGGCCTACGCCAGCCTGACGACGCACATTCGGTCGAGGGCTTTCG‑CGGTGG‑‑GCGGTTTTCACGCACACAGCACTGCCTGCCAGCCAtcgt < 6:157650/149‑1 (MQ=255) gagCCTGTACCCGTCGATCATCCGGACCTTTCTCATCGACCCGGTCGGGCTGATCGAAGGCCTACGCCAGCCTGACGACGCACATTCGGTCGAGGGCTTTCG‑CGGTGG‑‑GCGGTTTTCACGCACACAGCACTGCCTGCCAGCCAtcgtc > 3:344022/1‑148 (MQ=255) cTGTACCCGTCGATCATCCGGACCTTTCTCATCGACCCGGTCGGGCTGATCGAAGGCCTACGCCAGCCTGACGACGCACATTCGGTCGAGGGCTTTCG‑CGGTGG‑‑GCGGTTTTCACGCACACAGCACTGCCTGCCAGCCATCGTCGAACg > 7:239855/1‑149 (MQ=255) tGTACCCGTCGATCATCCGGACCTTTCTCATCGACCCGGTCGGGCTGATCGAAGGCCTACGCCAGCCTGACGACGCACATTCGGTCGAGGGCTTTCG‑Cgg < 3:124693/100‑1 (MQ=255) tGTACCCGTCGATCATCCGGACCTTTCTCATCGACCCGGTCGGGCTGATCGAAGGCCTACGCCAGCCTGACGACGCACATTCGGTCGAGGGCTTTCG‑Cgg > 4:124693/1‑100 (MQ=255) tACCCGTCGATCATCCGGACCTTTCTCATCGACCCGGTCGGGCTGATCGAAGGCCTACGCCAGCCTGACGACGCACATTCGGTCGAGGGCTTTCG‑CGGTGG‑‑GCGGTTTTCACGCACACAGCACTGCCTGCCAGCCATCGTCGAACggg < 4:52376/148‑1 (MQ=255) gagttcgatcagcccgaccgggtcgatgagaaaggtccggatgatcgaAGGCCTACGCCAGCCTGACGACGCACATTCGGTCGAGGGCTTTCG‑CGGGGG‑‑GCGGTTTTCACGCACACAGCACTGCCTGCCAGCCATCGTCGAACGGgtgt < 6:114425‑M2/101‑1 (MQ=255) cccGTCGATCATCCGGACCTTTCTCATCGACCCGGTCGGGCTGATCGAAGGCCTACGCCAGCCTGACGACGCACATTCGGTCGAGGGCTTTCG‑CGGTGG‑‑GCGGTTTTCACGCACACAGCACTGCCTGCCAGCCATCGTCGAACGGgtg < 5:115418/148‑1 (MQ=255) ccGTCGATCATCCGGACCTTTCTCATCGACCCGGTCGGGCTGATCGAAGGCCTACGCCAGCCTGACGACGCACATTCGGTCGAGGGCTTTCG‑CGGTGG‑‑GCGGTTTTCACGCACACAGCACTGCCTGCCAGCCATCGTCGAACGGGtgtg > 8:6819/1‑149 (MQ=255) gTCGATCATCCGGACCTTTCTCATCGACCCGGTCGGGCTGATCGAAGGCCTACGCCAGCCTGACGACGCACATTCGGTCGAGGGCTTTCG‑CGGTGG‑‑GCGGTTTTCACGCACACAGCACTGCCTGCCAGCCATCGTCGAACGGgtgt < 2:383455/146‑1 (MQ=255) gTCGATCATCCGGACCTTTCTCATCGACCCGGTCGGGCTGATCGAAGGCCTACGCCAGCCTGACGACGCACATTCGGTCGAGGGCTTTCG‑CGGTGG‑‑GCGGTTTTCACGCACACAGCACTGCCTGCCAGCCATCGTCGAACGGgtgt > 1:383455/1‑146 (MQ=255) gTCGATCATCCGGACCTTTCTCATCGACCCGGTCGGGCTGATCGAAGGCCTACGCCAGCCTGACGACGCACATTCGGTCGAGGGCTTTCG‑CGGTGG‑‑GCGGTTTTCACGCACACAGCACTGCCTGCCAGCCATCGTCGAACGGGTGTgg > 3:163509/1‑148 (MQ=255) tcgatcagcccgaccgggtcgatgagaaaggtccggatgatcgaAGGCCTACGCCAGCCTGACGACGCACATTCGGTCGAGGGCTTTCGCCGGTGG‑‑GCGGTTTTCACGCACACAGCACTGCCTGCCAGCCAtcgtc < 1:86023‑M2/92‑1 (MQ=255) tcgatcagcccgaccgggtcgatgagaaaggtccggatgatcgaAGGCCTACGCCAGCCTGACGACGCACATTCGGTCGAGGGCTTTCG‑CGGTGG‑‑GCGGTTTTCACGCACACAGCACTGCCTGCCAGCCAtcgtc > 2:86023‑M2/45‑135 (MQ=255) TCATCCGGACCTTTCTCATCGACCCGGTCGGGCTGATCGAAGGCCTACGCCAGCCTGACGACGCACATTCGGTCGAGGGCTTTCG‑CGGTGG‑‑GCGGTTTTCACGCACACAGCACTGCCTGCCAGCCATCGTCGAACGGGTGTggcagggc > 6:369851‑M1/1‑149 (MQ=255) CATCCGGACCTTTCTCATCGACCCGGTCGGGCTGATCGAAGGCCTACGCCAGCCTGACGACGCACATTCGGTCGAGGGCTTTCG‑CGGTGG‑‑GCGGTTTTCACGCACACAGCACTGCCTGCCAGCCATCGTCGAACGGGTGTggcaggg < 2:20615‑M1/147‑1 (MQ=255) tcCGGACCTTTCTCATCGACCCGGTCGGGCTGATCGAAGGCCTACGCCAGCCTGACGACGCACATTCGGTCGAGGGCTTTCG‑CGGTGG‑‑GCGGTTTTCACGCACACAGCACTGCCTGCCAGCCATCGTCGAACGGGTGTGgcagggcagg < 5:68617/149‑1 (MQ=255) ccTTTCTCATCGACCCGGTCGGGCTGATCGAAGGCCTACGCCAGCCTGACGACGCACATTCGGTCGAGGGCTTTCG‑CGGTGG‑‑GCGGTTTTCACGCACACAGCACTGCCTGCCAGCCATCGTCGAACGGGTGTGGCAGGGCAGGGAAGCg < 6:179282/149‑1 (MQ=255) cTTTCTCATCGACCCGGTCGGGCTGATCGAAGGCCTACGCCAGCCTGACGACGCACATTCGGTCGAGGGCTTTCG‑CGGTGG‑‑GCGGTTTTCACGCACACAGCACTGCCTGCCAGCCATCGTCGAACGGGTGTGgcagggcagg < 6:247340/142‑1 (MQ=255) cTTTCTCATCGACCCGGTCGGGCTGATCGAAGGCCTACGCCAGCCTGACGACGCACATTCGGTCGAGGGCTTTCG‑CGGTGG‑‑GCGGTTTTCACGCACACAGCACTGCCTGCCAGCCATCGTCGAACGGGTGTGgcagggcagg > 5:247340/1‑142 (MQ=255) tagcATCGACCAGGTCGGGCTGATCGAAGTCCTAAGCCAGCCTGACTACGCACATTCGGTCTAGGGCTTTCG‑CGGTGG‑‑GCGGTTTTCACGCAAACAGCACTGCATGCCAGCCATCGTCGAACGGGTGTGGCAGGGCAGGGAAGCGGcc < 6:15865/145‑1 (MQ=255) aTCGACCCGGTCGGGCTGATCGAAGGCCTACGCCAGCCTGACGACGCACATTCGGTCGAGGGCTTTCG‑CGGTGG‑‑GCGGTTTTCACGCACACAGCACTGCCTGCCAGCCATCGTCGAACGGGTGTGGCAGGGCAGGGAAGCGGCCaa < 3:256674/146‑1 (MQ=255) aTCGACCCGGTCGGGCTGATCGAAGGCCTACGCCAGCCTGACGACGCACATTCGGTCGAGGGCTTTCG‑CGGTGG‑‑GCGGTTTTCACGCACACAGCACTGCCTGCCAGCCATCGTCGAACGGGTGTGGCAGGGCAGGGAAGCGGCCAAgcg > 1:122808/1‑149 (MQ=255) aTCGACCCGGTCGGGCTGATCGAAGGCCTACGCCAGCCTGACGACGCACATTCGGTCGAGGGCTTTCG‑CGGTGG‑‑GCGGTTTTCACGCACACAGCACTGCCTGCCAGCCATCGTCGAACGGGTGTGGCAGGGCAGGGAAGCGGCCAAgcg > 8:97307/1‑149 (MQ=255) gACCCGGTCGGGCTGATCGAAGGCCTACGCCAGCCTGACGACGCACATTCGGTCGAGGGCTTTCG‑CGGTGG‑‑GCGGTTTTCACGCACACAGCACTGCCTGCCAGCCATCGTCGAACGGGTGTGGCAGGGCAGGGAAGCGGCCAAGCGCGa < 8:239855/149‑1 (MQ=255) ccGGTCGGGCTGATCGAAGGCCTACGCCAGCCTGACGACGCACATTCGGTCGAGGGCTTTCG‑CGGTGG‑‑GCGGTTTTCACGCACACAGCACTGCCTGCCAGCCATCGTCGAACGGGTGTGGCAGGGCAGGGAAGCGGCCAAGCGCGAggg > 2:306247/1‑149 (MQ=255) gCTGATCGAAGGCCTACGCCAGCCTGACGACGCACATTCGGTCGAGGGCTTTCG‑CGGTGG‑‑GCGGTTTTCACGCACACAGCACTGCCTGCCAGCCATCGTCGAACGGGTGTGGCAGGGCAGGGAAGCGGCCAAGCGCGAGGGCAATgcgc < 3:244492/149‑1 (MQ=255) cTGATCGAAGGCCTACGCCAGCCTGACGACGCACATTCGGTCGAGGGCTTTCG‑CGGTGG‑‑GCGGTTTTCACGCACACAGCACTGCCTGCCAGCCATCGTCGAACGGGTGTGGCAGGGCAGGGAAGCGGCCAAGCGCGAGGGCAATGcgcc > 3:283693/1‑149 (MQ=255) atcgaAGGCCTACGCCAGCCTGACGACGCACATTCGGTCGAGGGCTTTCG‑CGGTGGGAGCGGTTTTCACGCACACAGCACTGCCTGCCAGCCATCGTCGAACGGGTGTGGCAGGGCAGGGAAGCGGCCAAGCGCGAGGGCAATGcgccg > 1:301501‑M2/6‑149 (MQ=255) tcgaAGGCCTACGCCAGCCTGACGACGCACATTCGGTCGAGGGCTTTCG‑CGGTGG‑‑GCGGTTTTCACGCACACAGCACTGCCTGCCAGCCATCGTCGAACGGGTGTGGCAGGGCAGGGAAGCGGCCAAGCGCGAGGGCAATGCGCCGCTg < 3:343482‑M2/145‑1 (MQ=255) | GGCAGCCGGCCGGACGAAGCCAGCCCCGGCGGGTTTGTCATGGATTCGCGGCCAGGGCTTTACGACTCGGTGCTGGTGCTGGACTACAAGAGCCTGTACCCGTCGATCATCCGGACCTTTCTCATCGACCCGGTCGGGCTGATCGAAGGCCTACGCCAGCCTGACGACGCACATTCGGTCGAGGGCTTTCG‑CGGTGG‑‑GCGGTTTTCACGCACACAGCACTGCCTGCCAGCCATCGTCGAACGGGTGTGGCAGGGCAGGGAAGCGGCCAAGCGCGAGGGCAATGCGCCGCTG > NC_002947/2731840‑2732130 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |