| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 3183422 = | 51 (0.820) | 4 (0.070) | 4/256 | NT | 7.9% | coding (1082/1173 nt) | PP_2793 | acyl‑CoA dehydrogenase family protein |
| ? | NC_002947 | 3183457 = | 44 (0.740) | coding (1117/1173 nt) | PP_2793 | acyl‑CoA dehydrogenase family protein | |||||
CCGGTCACCAGGGCGCGACGCCCGTCGAGGGCGAACAGTCGGGCAAGGTTCGGCTGCATCAGTGGGCCTCCAGGCGCTGGTCGAGCAGCTTCTTCGCCAGGCTCATGCGGTGCACTTCGCTCGGGCCGTCATAGATGCGGAACGGGCGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3183571‑3183422‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgaaGTGCACCGCATGAGCCTGGCGAAGAAGCTGCTCGACCAGCGCCTGGAGGCCCACTGATGCAGCCGAACCTTGCCCGACTGTTCGCCCTCGACGGGCGTCGCGCCCTGGTGACCGGGGCCTCCAGCGGCCTGGGCCGTCACTTCGCCA > NC_002947/3183457‑3183603 CCGGTCACCAGGGCGCGACGCCCGTCGAGGGCGAACAGTCGGGCAAGGTTCGGCTGCATCAGTGGGCCTCCAGGCGCTGGTCGAGCAGCTTCTTCGCCAGGCTCATGCGGTGCACTTCGCTCGGGCCGTCATAGATGCGGAACGGGCG > 1:201307/1‑148CCGGTCACCAGGGCGCGACGCCCGTCGAGGGCGAACAGTCGGGCAAGGTTCGGCTGCAGCAGTGGGCCTCCAGGCGCTGGTCGAGCAGCTTCTTCGCCAGGCTCATGCGGTGCACTTCGCTCGGGCCGGCATAGATGCGGAACGGGCG > 3:6187/1‑148 CTTCGCTCGGGCCGTCATAGATGCGGAACGGGCGAAGTGCACCGCATGAGCCTGGCGAAGAAGCTGCTCGACCAGCGCCTGGAGGCCCACTGATGCAGCCGAACCTTGCCCGACTGTTCGCCCTCGACGGGCGTCGCGCCCTGG > 5:10302/1‑144 CTTCGCTCGGGCCGTCATAGATGCGGAACGGGCGAAGTGCACCGCATGAGCCTGGCGAAGAAGCTGCTCGACCAGCGCCTGGAGGCCCACTGATGCAGCCGAACCTTGCCCGACTGTTCGCCCTCGACGGGCGTCGCGCCCTGG < 6:10302/144‑1 TTCGCTCGGGCCGTCATAGATGCGGAACGGGCGAAGTGCACCGCATGAGCCTGGCGAAGAAGCTGCTCGACCAGCGCCTGGAGGCCCACTGATGCAGCCGAACCTTGCCCGACTGTTCGCCCTCGACGGGCGTCGCGCCCTGGTGACCG > 3:271020/1‑149 CTCGGGCCGTCATAGATGCGGAACGGGCGAAGTGCACCGCATGAGCCTGGCGAAGAAGCTGCTCGACCAGCGCCTGGAGGCCCACTGATGCAGCCGAACCTTGCCCGACTGTTCGCCCTCGACGGGCGTCGCGCCCTGGTGACCGGGGC > 1:226707/1‑149 CGAAGTGCACCGCATGAGCCTGGCGAAGAAGCTGCTCGACCAGCGCCTGGAGGCCCACTGATGCAGCCGAACCTTGCCCGACTGTTCGCCCTCGACGGGCGTCGCGCCCTGGTGACCGGGGCCTCCAGCGGCCTGGGCCGTCACTTCGC < 6:207270/149‑1 AAGTGCACCGCATGAGCCTGGCGAAGAAGCTGCTCGACCAGCGCCTGGAGGCCCACTGATGCAGCCGAACCTTGCCCGACTGTTCGCCCTCGACGGGCGTCGCGCCCTGGTGACCGGGGCCTCCAGCGGCCTGGGCCGTCACTTCGCCA > 8:101705/1‑149 CCGGTCACCAGGGCGCGACGCCCGTCGAGGGCGAACAGTCGGGCAAGGTTCGGCTGCATCAGTGGGCCTCCAGGCGCTGGTCGAGCAGCTTCTTCGCCAGGCTCATGCGGTGCACTTCGCTCGGGCCGTCATAGATGCGGAACGGGCGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3183571‑3183422‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgaaGTGCACCGCATGAGCCTGGCGAAGAAGCTGCTCGACCAGCGCCTGGAGGCCCACTGATGCAGCCGAACCTTGCCCGACTGTTCGCCCTCGACGGGCGTCGCGCCCTGGTGACCGGGGCCTCCAGCGGCCTGGGCCGTCACTTCGCCA > NC_002947/3183457‑3183603 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |