New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3183422 =	51 (0.820)	4 (0.070)	4/256	NT	7.9%	coding (1082/1173 nt)	PP_2793	acyl‑CoA dehydrogenase family protein
	?	NC_002947	3183457 =	44 (0.740)					coding (1117/1173 nt)	PP_2793	acyl‑CoA dehydrogenase family protein

GACCAGGGCCGGCGCGCCAATGTCGATTCGAGCATGGCCAAGGTGATCAGCGCCGAGGCGCTGTGGCGGGTGGTCGATCGTTGCGTCCAGGTATTGGGTGGACGCGGGGTGACCGGGGACACCGTGGT‑GGAGCGGATCTTCCGCGACATTCGCCCGTTCCGCATCTATGACGGCCCGAGCGAAGTGCACCGCATGAGCCTGGCGAAGAAGCTGCTCGACCAGCGCCTGGAGGCCCACTGATGCAGCCGAACCTTGCCCGACTGTTCGCCCTCGACGGGCGTCGCGCCCTGG  >  NC_002947/3183274‑3183564                                                                                                                                                      |                                                                                                                                               gACCAGGGCCGGCGCGCCAATGTCGAGTCGAGCATGGCCAAGGTGATCAGCGCCGAGGCGCTGTGGAGGGTGGTCGATCGTTGCGTCCAGGTATTGGGTGGAAGCGGGGTGACCGGGGACACCGGGGT‑GGAGCGGCTCGGCCGCGACAt                                                                                                                                                >  4:6187/1‑149 (MQ=255)   tggcgaagtgacggcccaggccgctggaggccccggtcaccagggcgcgacgcccgtcgagggcgaacagtcgggcaaggttcggctgcatcagtgggcctccaggcgctggtcgagcagcttcttcgccaggctcatgcggtgcactt                                                                                                                                               >  8:101705‑M1/148‑149 (MQ=255)    cAGGGCCGGCGCGCCAATGTCGATTCGAGCATGGCCAAGGTGATCAGCGCCGAGGCGCTGTGGCGGGTGGTCGATCGTTGCGTCCAGGTATTGGGTGGACGCGGGGTGACCGGGGACACCGTGGT‑GGAGCGGATCTTCCGCGACATTCg                                                                                                                                             >  2:23866/1‑149 (MQ=255)     gcgaagtgacggcccaggccgctggaggccccggtcaccagggcgcgacgcccgtcgagggcgaacagtcgggcaaggttcggctgcatcagtgggcctccaggcgctggtcgagcagcttcttcgccaggctcatgcggtgcacTTCg                                                                                                                                             <  6:207270‑M1/4‑1 (MQ=255)     aGGGCCGGCGCGCCAATGTCGCTTCGAGCATGGCCAAGGCGATCCGCGCCGAGGCGCTGTGGCGGGTGGTCGATCGTTGCGTCCAGGTATTGGGTGGACGCGGGGTGACCGGGGACACCGTGGT‑GGAGCGGATCTTCCGCGACATTCGc                                                                                                                                            <  4:59420/149‑1 (MQ=255)     aGGGCCGGCGCGCCAATGTCGATTCGAGCATGGCCAAGGTGATCAGCGCCGAGGCGCTGTGGCGGGTGGTCGATCGTTGCGTCCAGGTATTGGGTGGACGCGGGGTGACCGGGGACACCGTGGT‑GGAGCGGATCTTCCGCGACATTCGc                                                                                                                                            <  2:218776/149‑1 (MQ=255)       ggCCGGCGCGCCAATGTCGATTCGAGCATGGCCAAGGTGATCAGCGCCGAGGCGCTGTGGCGGGTGGTCGATCGTTGCGTCCAGGTATTGGGTGGACGCGGGGTGACCGGGGACACCGTGGT‑GGAGCGGATCTTCCGCGACATTCGccc                                                                                                                                          <  8:278871/149‑1 (MQ=255)       ggCCGGCGCGCCAATGTCGATTCGAGCATGGCCAAGGTGATCAGCGCCGAGGCGCTGTGGCGGGTGGTCGATCGTTGCGTCCAGGTATTGGGTGGACGCGGGGTGACCGGGGACACCGTGGT‑GGAGCGGATCTTCCGCGACATTCGccc                                                                                                                                          <  5:284138/149‑1 (MQ=255)          cGGCGCGCCAATGTCGATTCGAGCATGGCCAAGGTGATCAGCGCCGAGGCGCTGTGGCGGGTGGTCGATCGTTGCGTCCAGGTATTGGGTGGACGCGGGGTGACCGGGGACACCGTGGT‑GGAGCGGATCTTCCGCGACATTCGCCCGtt                                                                                                                                       <  3:97267/149‑1 (MQ=255)            gcgcgcCAATGTCGATTCGAGCATGGCCAAGGTGATCAGCGCCGAGGCGCTGTGGCGGGTGGTCGATCGTTGCGTCCAGGTATTGGGTGGACGCGGGGTGACCGGGGACACCGTGGTCGGAGCGGATCTTCCGCGACATTCGCCCGTTc                                                                                                                                      <  1:238322/149‑1 (MQ=255)              gcgcCAATGTCGATTCGAGCATGGCCAAGGTGATCAGCGCCGAGGCGCTCTGGCGGGTGGTCGATCGTTGCGTCCAGGTATTGGGTGGACGCGGGGTGACCGGGGACACCGTGGT‑GGAGCGGATCTTCCGCGACATTCGCCCGTTCCg                                                                                                                                    >  7:281594/1‑148 (MQ=255)                gcCAATGTCGATTCGAGCATGGCCAAGGTGATCAGCGCCGAGGCGCTGTGGCGGGTGGTCGATCGTTGCGTCCAGGTATTGGGTGGACGCGGGGTGACCGGGGACACCGTGGT‑GGAGCGGATCTTCCGCGACATTCGCCCGTTCCGCa                                                                                                                                  >  3:42071/1‑148 (MQ=255)                       tCGATTCGAGCATGGCCAAGGTGATCAGCGCCGAGGCGCTGTGGCGGGTGGTCGATCGTTGCGTCCAGGTATTGGGTGGACGCGGGGTGACCGGGGACACCGTGGT‑GGAGCGGATCTTCCGCGACATTCGCCCGTTCCGCATCTATGa                                                                                                                           <  1:333416/148‑1 (MQ=255)                       tCGATTCGAGCATGGCCAAGGTGATCAGCGCCGAGGCGCTGTGGCGGGTGGTCGATCGTTGCGTCCAGGTATTGGGTGGACGCGGGGTGACCGGGGACACCGTGGT‑GGAGCGGATCTTCCGCGACATTCGCCCGTTCCGCATCTATGAc                                                                                                                          <  4:346472/149‑1 (MQ=255)                                gccccggtcaccagggcgcgacgcccgtcgagggcgaacagtcgggcaaggttcggctgcatcagtgggcctccaggcgctggtcgagcagcttcttcgccaggctcatgcggtgcacTTCGCCCGTTCCGCATCTATGACGGCCCGAg                                                                                                                  >  1:226707‑M1/119‑149 (MQ=255)                                gCATGGCCAAGGTGATCAGCGCCGAGGCGCTGTGGCGGGTGGTCGATCGTTGCGTCCAGGTATTGGGTGGACGCGGGGTGACCGGGGACACCGTGGT‑GGAGCGGATCTTCCGCGACATTCGCCCGTTcc                                                                                                                                     <  3:29785/129‑1 (MQ=255)                                gCATGGCCAAGGTGATCAGCGCCGAGGCGCTGTGGCGGGTGGTCGATCGTTGCGTCCAGGTATTGGGTGGACGCGGGGTGACCGGGGACACCGTGGT‑GGAGCGGATCTTCCGCGACATTCGCCCGTTcc                                                                                                                                     >  4:29785/1‑129 (MQ=255)                                gCATGGCCAAGGTGATCAGCGCCGAGGCGCTGTGGCGGGTGGTCGATCGTTGCGTCCAGGTATTGGGTGGACGCGGGGTGACCGGGGACACCGTGGT‑GGAGCGGATCTTCCGCGACATTCGCCCGTTCCGCATCTATGACGGCCCGAGc                                                                                                                 <  1:114794/149‑1 (MQ=255)                                gCATGGCCAAGGTGATCAGCGCCGAGGCGCTGTGGCGGGTGGTCGATCGTTGCGTCCAGGTATTGGGTGGACGCGGGGTGACCGGGGACACCGTGGT‑GGAGCGGATCTTCCGCGACATTCGCCCGTTCCGCATCTATGACGGCCCGAGc                                                                                                                 <  8:69612/149‑1 (MQ=255)                                 cATGGCCAAGGTGATCAGCGCCGAGGCGCTGTGGCGGGTGGTCGATCGTTGCGTCCAGGTATTGGGTGGACGCGGGGTGACCGGGGACACCGTGGT‑GGAGCGGATCTTCCGCGACATTCGCCCGTTCCGCATCTATGACGGCCCGAGc                                                                                                                 >  5:240414/1‑148 (MQ=255)                                 cATGGCCAAGGTGATCAGCGCCGAGGCGCTGTGGCGGGTGGTCGATCGTTGCGTCCAGGTATTGGGTGGACGCGGGGTGACCGGGGACACCGTGGT‑GGAGCGGATCTTCCGCGACATTCGCCCGTTCCGCATCTATGACGGCCCGAGc                                                                                                                 >  5:23569/1‑148 (MQ=255)                                    cggtcaccagggcgcgacgcccgtcgagggcgaacagtcgggcaaggttcggctgcatcagtgggcctccaggcgctggtcgagcagcttcttcgccaggctcatgcggtgcacTTCGCCCGTTCCGCATCTATGACGGCCCGAGCGaa                                                                                                              >  3:271020‑M1/115‑149 (MQ=255)                                     gCCAAGGTGATCAGCGCCGAGGCGCTGTGGCGGGTGGTCGATCGTTGCGTCCAGGTATTGGGTGGACGCGGGGTGACCGGGGACACCGTGGT‑GGAGCGGATCTTCCGCGACATTCGCCCGTTCCGCATCTATGACGGCCCGAGCGAAGt                                                                                                            <  1:23866/149‑1 (MQ=255)                                          ggTGATCAGCGCCGAGGCGCTGTGGCGGGTGGTCGATCGTTGCGTCCAGGTATTGGGTGGACGCGGGGTGACCGGGGACACCGTGGT‑GGAGCGGATCTTCCGCGACATTCGCCCGTTCCGCATCTATGACGGCCCGAGCGAAGTGCAcc                                                                                                       >  3:152208/1‑149 (MQ=255)                                          ccgccacAGCGCCTCGGCGCTGTGGCGGGTGGTCGATCGTTGCGTCCAGGTATTGGGTGGACGCGGGGTGACCGGGGACACCGTGGT‑GGAGCGGATCTTCCGCGACATTCGCCCGTTCCGCATCTATGACGGCCCGAGCGAAGTGCAcc                                                                                                       <  7:161622/143‑1 (MQ=255)                                          ccgccacAGCGCCTCGGCGCTGTGGCGGGTGGTCGATCGTTGCGTCCAGGTATTGGGTGGACGCGGGGTGACCGGGGACACCGTGGT‑GGAGCGGATCTTCCGCGACATTCGCCCGTTCCGCATCTATGACGGCCCGAGCGAAGTGCAcc                                                                                                       >  8:161622/7‑149 (MQ=255)                                          ccagggcgcgacgcccgtcgagggcgaacagtcgggcaaggttcggctgcatcagtgggcctccaggcgctggtcgagcagcttcttcgccaggctcatgcggtgcacTTCGCCCGTTCCGCATCTATGACGGCCCGAGCGAAg                                                                                                             <  6:10302‑M1/36‑1 (MQ=255)                                          ccagggcgcgacgcccgtcgagggcgaacagtcgggcaaggttcggctgcatcagtgggcctccaggcgctggtcgagcagcttcttcgccaggctcatgcggtgcacTTCGCCCGTTCCGCATCTATGACGGCCCGAGCGAAg                                                                                                             >  5:10302‑M1/109‑144 (MQ=255)                                             gATCAGCGCCGAGGCGCTGTGGCGGGTGGTCGATCGTTGCGTCCAGGTATTGGGTGGACGCGGGGTGACCGGGGACACCGTGGT‑GGAGCGGATCTTCCGCGACATTCGCCCGTACCGCATCTATGACGGCCCGAGCGAAGTGCACCGCa                                                                                                    >  1:25556/1‑149 (MQ=255)                                                 aGCGCCGAGGCGCTGTGGCGGGTGGTCGATCGTTGCGTCCAGGTATTGGGTGGACGCGGGGTGACCGGGGACACCGTGGT‑GGAGCGGATCTTCCGCGACATTCGCCCGTTCCGCATCTATGACGGCCCGAGCGAAg                                                                                                             >  8:47417/1‑136 (MQ=255)                                                 aGCGCCGAGGCGCTGTGGCGGGTGGTCGATCGTTGCGTCCAGGTATTGGGTGGACGCGGGGTGACCGGGGACACCGTGGT‑GGAGCGGATCTTCCGCGACATTCGCCCGTTCCGCATCTATGACGGCCCGAGCGAAg                                                                                                             <  7:47417/136‑1 (MQ=255)                                                    gcCGAGGCGCTGTGGCGGGTGGTCGATCGTTGCGTCCAGGTATTGGGTGGACGCGGGGTGACCGGGGACACCGTGGT‑GGAGCGGATCTTCCGCGACATTCGCCCGTTCCGCATCTATGACGGCCCGAGCGAAGTGCACCGCATGAGCCt                                                                                             >  3:289101/1‑149 (MQ=255)                                                    gcCGAGGCGCTGTGGCGGGTGGTCGATCGTTGCGTCCAGGTATTGGGTGGACGCGGGGTGACCGGGGACACCGTGGT‑GGAGCGGATCTTCCGCGACATTCGCCCGTTCCGCATCTATGACGGCCCGAGCGAAGTGCACCGCATGAGCCt                                                                                             >  2:201307/1‑149 (MQ=255)                                                      cGAGGCGCTGTGGCGGGTGGTCGATCGTTGCGTCCAGGTATTGGGTGGACGCGGGGTGACCGGGGACACCGTGGT‑GGAGCGGATCTTCCGCGACATTCGCCCGTTCCGCATCTATGACGGCCCGAGCGAAGTGCACCGCATGAGCCTgg                                                                                           <  4:42071/149‑1 (MQ=255)                                                           cgcTGTGGCGGGTGGTCGATCGTTGCGTCCAGGTATTGGGTGGACGCGGGGTGACCGGGGACACCGTGGT‑GGAGCGGATCTTCCGCGACATTCGCCCGTTCCGCATCTATGACGGCCCGAGCGAAGTGCACCGCATGAGCCTGGCgaag                                                                                      <  6:23569/149‑1 (MQ=255)                                                             cTGTGGCGGGTGGTCGATCGTTGCGTCCAGGTATTGGGTGGACGCGGGGTGACCGGGGACACCGTGGT‑GGAGCGGATCTTCCGCGACATTCGCCCGTTCCGCATCTATGACGGCCCGAGCGAAGTGCACCGCATGAGCCTGGCgaagaa                                                                                    <  6:181594/149‑1 (MQ=255)                                                             cTGTGGCGGGTGGTCGATCGTTGCGTCCAGGTATTGGGTGGACGCGGGGTGACCGGGGACACCGTGGT‑GGAGCGGATCTTCCGCGACATTCGCCCGTACCGCATCTATGACGGCCCGAGCGAAGTGCACCGCATGAGCCTGGCgaagaa                                                                                    <  2:25556/149‑1 (MQ=255)                                                                tgGCGGGTGGTCGATCGTTGCGTCCAGGTATTGGGTGGACGCGGGGTGACCGGGGACACCGTGGT‑GGAGCGGATCTTCCGCGACATTCGCCCGTTCCGCATCTATGACGGCCCGAGCGAAGTGCACCGCATGAGCCTGGCGAAGAAgc                                                                                  <  8:308016/148‑1 (MQ=255)                                                                          tCGATCGTTGCGTCCAGGTATTGGGTGGACGCGGGGTGACCGGGGACACCGTGGT‑GGAGCGGATCTTCCGCGACATTCGCCCGTTCCGCATCTATGACGGCCCGAGCGAAGTGCACCGCATGAGCCTGGCGAAGAAGCTGCTCGACCAg                                                                       >  5:364527/1‑149 (MQ=255)                                                                                    cgtcacggTTTTGGTTGGTCGAGTGGTGACCGTGGTCACCGTGGT‑GGAGCGGATCTTGCGCTACATTCGCCCGTTCCGCATCTATGACGTCCCGAGCGTAGTGCACGGCATGAGCCTGGCGAAGACGCTGCTCGACCAGCGCCTGGAg                                                              <  3:257450/142‑1 (MQ=255)                                                                                    cGTCCAGGTATTGGGTGGACGCGGGGTGACCGGGGACACCGTGGT‑GGAGCGGATCTTCCGCGACATTCGCCCGTTCCGCATCTATGATGGCCCGAGCGAAGTGCACCGCATGAGCCTGGCGAAGAAGCTGCTCGACCAGCGCCTGGAg                                                              <  3:377661/148‑1 (MQ=255)                                                                                    cGTCCAGGTATTGGGTGGACGCGGGGTGACCGGGGACACCGTGGT‑GGAGCGGATCTTCCGCGACATTCGCCCGTTCCGCATCTATGACGGCCCGAGCGAAGTGCACAGCATGAGCCTGGCGAAGAAGCTGCTCGACCAGCGCCTGGAgg                                                             >  7:163497/1‑149 (MQ=255)                                                                                         aGGTATTGGGTGGACGCGGGGTGACCGGGGACACCGTGGT‑GGAGCGGATCTTCCGCGACATTCGCCCGTTCCGCATCTATGACGGCCCGAGCGAAGTGCACCGCATGAGCCTGGCGAAGAAGCTGCTCGACCAGCGCCTGGAGGCCCAc                                                        >  3:356217/1‑149 (MQ=255)                                                                                           gTATTGGGTGGACGCGGGGTGACCGGGGACACCGTGGT‑GGAGCGGATCTTCCGCGACATTCGCCCGTTCCGCATCTACGACGGCCCGAGCGAAGTGCACCGCATGAGCCTGGCGAAGAAGCTGCTCGACCAGCGCCTGGAGGCCCACt                                                       >  4:118787/1‑148 (MQ=255)                                                                                              ttGGGTGGACGCGGGGTGACCGGGGACACCGTGGT‑GGAGCGGATCTTCCGCGACATTCGCCCGTTCCGCATCTATGACGGCCCGAGCGAAGTGCACCGCATGAGCCTGGCGAAGAAGCTGCTCGACCAGCGCCTGGAGGCCCACTGATg                                                   <  5:199110/149‑1 (MQ=255)                                                                                                 ggTGGACGCGGGGTGACCGGGGACACCGTGGT‑GGAGCGGATCTTCCGCGACATTCGCCCGTTCCGCATCTATGACGGCCCGAGCGAAGTGCACCGCATGAGCCTGGCGAAGAAGCTGCTCGACCAGCGCCTGGAGGCCCACTGATGCAg                                                >  1:197552/1‑149 (MQ=255)                                                                                                  gTGGACGCGGGGTGACCGGGGACACCGTGGT‑GGAGCGGATCTTCCGCGACATTCGCCCGTTCCGCATCTATGACGGCCCGAGCGAAGTGCACCGCATGAGCCTGGCGAAGAAGCTGCTCGACCAGCGCCTGGAGGCCCACTGATGCAGc                                               <  6:240414/149‑1 (MQ=255)                                                                                                  gTGGACGCGGGGTGACCGGGGACACCGTGGT‑GGAGCGGATCTTCCGCGACATTCGCCCGTTCCGCATCTATGACGGCCCGAGCGAAGTGCACCGCATGAGCCTGGCGAAGAAGCTGCTCGACCAGCGCCTGGAGGCCCACTGATGCAGc                                               <  4:289101/149‑1 (MQ=255)                                                                                                  gTGGACGCGGGGTGACCGGGGACACCGTGGT‑GGAGCGGATCTTCCGCGACATTCGCCCGTTCCGCATCTATGACGGCCAGAGCGAAGTGCACCGCATGAGCCTGGCGAAGAAGCTGCTCGACAAGCGCCTGGAGGCCCACTGATGCAga                                               >  7:198555/1‑148 (MQ=255)                                                                                                        gcgGGGTGACCGGGGACACCGTGGT‑GGAGCGGATCTTCCGCGACATTCGCCCGTTCCGCATCTATGACGGCCCGAGCGAAGTGCACCGCATGAGCCTGGCGAAGAAGCTGCTCGACCAGCGCCTGGAGGCCCACTGATGCAGCCGAAcc                                         >  5:335659/1‑149 (MQ=255)                                                                                                          ggggTGACCGGGGACACCGTGGT‑GGAGCGGATCTTCCGCGACATTCGCCCGTTCCGCATCTATGACGGCCCGAGCGAAGTGCACCGCATGAGCCTGGCGAAGAAGCTGCTCGACCAGCGCCTGGAGGCCCACTGATGCAGCCGAACCtt                                       >  4:251373/1‑149 (MQ=255)                                                                                                            ggTGACCGGGGACACCGTGGT‑GGAGCGGATCTTCCGCGACATTCGCCCGTTCCGCATCTATGACGGCCCGAGCGAAGTGCACCGCATGAGCCTGGCGAAGAAGCTGCTCGACCAGCGCCTGGAGGCCCACTGATGCAGCCGAACCTTGc                                     >  1:71383/1‑149 (MQ=255)                                                                                                              tGACCGGGGACACCGTGGT‑GGAGCGGATCTTCCGCGACATTCGCCCGTTCCGCATCTATGACGGCCCGAGCGAAGTGCTCCGCATGAGCCTGGCGAAGAAGCTGCTCGACCAGCGCCTGGAGGCCCACTGATGCAGCCGAACCTTGccc                                   >  7:248690/1‑149 (MQ=255)                                                                                                                                     gCGGATCTTCCGCGACATTCGCCCGTTCCGCATCTATGACGGCCCGAGCGAAGTGCACCGCATGAGCCTGGCGAAGAAGCTGCTCGACCAGCGCCTGGAGGCCCACTGATGCAGCCGAACCTTGCCCGACTGTTCGCCCTCGACGGGCg             >  7:109225/1‑149 (MQ=255)                                                                                                                                     gCGGATCTTCCGCGACATTCGCCCGTTCCGCATCTATGACGGCCCGAGCGAAGTGCACCGCATGAGCCTGGCGAAGAAGCTGCTCGACCAGCGCCTGGAGGCCCACTGATGCAGCCGAACCTTGCCCGACTGTTCGCCCTCGACGGGCg             >  2:114189/1‑149 (MQ=255)                                                                                                                                         aTCTTCCGCGACATTCGCCCGTTCCGCATCTATGACGGCCCGAGCGAAGTGCACCGCATGAGCCTGGCGAAGAAGCTGCTCGACCAGCGCCTGGAGGCCCACTGATGCAGCCGAACCTTGCCCGACTGTTCGCCCTCGACGGGCGTcgc         >  5:207270/1‑149 (MQ=255)                                                                                                                                              ccGCGACATTCGCCCGTTCCGCATCTATGACGGCCCGAGCGAAGTGCACCGCATGAGCCTGGCGAAGAAGCTGCTCGACCAGCGCCTGGAGGCCCACTGATGCAGCCGAACCTTGCCCGACTGTTCGCCCTCGACGGGCGTcgc         <  2:197552/144‑1 (MQ=255)                                                                                                                                              ccGCGACATTCGCCCGTTCCGCATCTATGACGGCCCGAGCGAAGTGCACCGCATGAGCCTGGCGAAGAAGCTGCTCGACCAGCGCCTGGAGGCCCACTGATGCAGCCGAACCTTGCCCGACTGTTCGCCCTCGACGGGCGTCGCGcc      <  3:251373/147‑1 (MQ=255)                                                                                                                                               cgcgACATTCGCCCGTTCCGCATCTATGACGGCCCGAGCGAAGTGCACCGCATGAGCCTGGCGAAGAAGCTGCTCGACCAGCGCCTGGAGGCCCACTGATGCAGCCGAACCTTGCCCGACTGTTCGCCCTCGACGGGCGTCGCGCCCt    <  6:364527/148‑1 (MQ=255)                                                                                                                                               cgcgACATTCGCCCGTTCCGCATCTATGACGGCCCGAGCGAAGTGCACCGCATGAGCCTGGCGAAGAAGCTGCTCGACCAGCGCCTGGAGGCCCACTGATGCAGCCGAACCTTGCCCGACTGTTCGCCCTCGACGGGCGTCGCGCCCTg   <  8:248690/149‑1 (MQ=255)                                                                                                                                                gcgACATTCGCCCGTTCCGCATCTATGACGGCCCGAGCGAAGTGCACCGCATGAGCCTGGCGAAGAAGCTGCTCGACCAGCGCCTGGAGGCCCACTGATGCAGCCGAACCTTGCCCGACTGTTCGCCCTCGACGGGCGTCGCGCCCTgg  >  1:341854/1‑149 (MQ=255)                                                                                                                                                     aTTCGCCCGTTCCGCATCTATGACGGCCCGAGCGAAGTGCACCGCATGAGCCTg                                                                                            >  1:82415/1‑54 (MQ=255)                                                                                                                                                     aTTCGCCCGTTCCGCATCTATGACGGCCCGAGCGAAGTGCACCGCATGAGCCTg                                                                                            <  2:82415/54‑1 (MQ=255)                                                                                                                                                      |                                                                                                                                               GACCAGGGCCGGCGCGCCAATGTCGATTCGAGCATGGCCAAGGTGATCAGCGCCGAGGCGCTGTGGCGGGTGGTCGATCGTTGCGTCCAGGTATTGGGTGGACGCGGGGTGACCGGGGACACCGTGGT‑GGAGCGGATCTTCCGCGACATTCGCCCGTTCCGCATCTATGACGGCCCGAGCGAAGTGCACCGCATGAGCCTGGCGAAGAAGCTGCTCGACCAGCGCCTGGAGGCCCACTGATGCAGCCGAACCTTGCCCGACTGTTCGCCCTCGACGGGCGTCGCGCCCTGG  >  NC_002947/3183274‑3183564

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.