New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 3183422 = | 51 (0.820) | 4 (0.070) | 4/256 | NT | 7.9% | coding (1082/1173 nt) | PP_2793 | acyl‑CoA dehydrogenase family protein |
? | NC_002947 | 3183457 = | 44 (0.740) | coding (1117/1173 nt) | PP_2793 | acyl‑CoA dehydrogenase family protein |
GCCAAGGTGATCAGCGCCGAGGCGCTGTGGCGGGTGGTCGATCGTTGCGTCCAGGTATTGGGTGGACGCGGGGTGACCGGGGACACCGTGGTGGAGCGGATCTTCCGCGACATTCGCCCGTTCCGCATCTATGACGGCCCGAGCGAAGTGCACCGCATGAGCCTGGCGAAGAAGCTGCTCGACCAGCG‑CCTGGAGGCCCACTGATGCAGCCGAACCTTGCCCGACTGTTCGCCCTCGACGGGCGTCGCGCCCTGGTGACCGGGGCCTCCAGCGGCCTGGGCCGTCACTTCGCCA > NC_002947/3183310‑3183603 | gCCAAGGTGATCAGCGCCGAGGCGCTGTGGCGGGTGGTCGATCGTTGCGTCCAGGTATTGGGTGGACGCGGGGTGACCGGGGACACCGTGGTGGAGCGGATCTTCCGCGACATTCGCCCGTTCCGCATCTATGACGGCCCGAGCGAAGt < 1:23866/149‑1 (MQ=255) ccagggcgcgacgcccgtcgagggcgaacagtcgggcaaggttcggctgcatcagtgggcctccaggcgctggtcgagcagcttcttcgccaggctcatgcggtgcacTTCGCCCGTTCCGCATCTATGACGGCCCGAGCGAAg < 6:10302‑M1/36‑1 (MQ=255) ccagggcgcgacgcccgtcgagggcgaacagtcgggcaaggttcggctgcatcagtgggcctccaggcgctggtcgagcagcttcttcgccaggctcatgcggtgcacTTCGCCCGTTCCGCATCTATGACGGCCCGAGCGAAg > 5:10302‑M1/109‑144 (MQ=255) ggTGATCAGCGCCGAGGCGCTGTGGCGGGTGGTCGATCGTTGCGTCCAGGTATTGGGTGGACGCGGGGTGACCGGGGACACCGTGGTGGAGCGGATCTTCCGCGACATTCGCCCGTTCCGCATCTATGACGGCCCGAGCGAAGTGCAcc > 3:152208/1‑149 (MQ=255) ccgccacAGCGCCTCGGCGCTGTGGCGGGTGGTCGATCGTTGCGTCCAGGTATTGGGTGGACGCGGGGTGACCGGGGACACCGTGGTGGAGCGGATCTTCCGCGACATTCGCCCGTTCCGCATCTATGACGGCCCGAGCGAAGTGCAcc > 8:161622/7‑149 (MQ=255) ccgccacAGCGCCTCGGCGCTGTGGCGGGTGGTCGATCGTTGCGTCCAGGTATTGGGTGGACGCGGGGTGACCGGGGACACCGTGGTGGAGCGGATCTTCCGCGACATTCGCCCGTTCCGCATCTATGACGGCCCGAGCGAAGTGCAcc < 7:161622/143‑1 (MQ=255) gATCAGCGCCGAGGCGCTGTGGCGGGTGGTCGATCGTTGCGTCCAGGTATTGGGTGGACGCGGGGTGACCGGGGACACCGTGGTGGAGCGGATCTTCCGCGACATTCGCCCGTACCGCATCTATGACGGCCCGAGCGAAGTGCACCGCa > 1:25556/1‑149 (MQ=255) aGCGCCGAGGCGCTGTGGCGGGTGGTCGATCGTTGCGTCCAGGTATTGGGTGGACGCGGGGTGACCGGGGACACCGTGGTGGAGCGGATCTTCCGCGACATTCGCCCGTTCCGCATCTATGACGGCCCGAGCGAAg > 8:47417/1‑136 (MQ=255) aGCGCCGAGGCGCTGTGGCGGGTGGTCGATCGTTGCGTCCAGGTATTGGGTGGACGCGGGGTGACCGGGGACACCGTGGTGGAGCGGATCTTCCGCGACATTCGCCCGTTCCGCATCTATGACGGCCCGAGCGAAg < 7:47417/136‑1 (MQ=255) gcCGAGGCGCTGTGGCGGGTGGTCGATCGTTGCGTCCAGGTATTGGGTGGACGCGGGGTGACCGGGGACACCGTGGTGGAGCGGATCTTCCGCGACATTCGCCCGTTCCGCATCTATGACGGCCCGAGCGAAGTGCACCGCATGAGCCt > 3:289101/1‑149 (MQ=255) gcCGAGGCGCTGTGGCGGGTGGTCGATCGTTGCGTCCAGGTATTGGGTGGACGCGGGGTGACCGGGGACACCGTGGTGGAGCGGATCTTCCGCGACATTCGCCCGTTCCGCATCTATGACGGCCCGAGCGAAGTGCACCGCATGAGCCt > 2:201307/1‑149 (MQ=255) cGAGGCGCTGTGGCGGGTGGTCGATCGTTGCGTCCAGGTATTGGGTGGACGCGGGGTGACCGGGGACACCGTGGTGGAGCGGATCTTCCGCGACATTCGCCCGTTCCGCATCTATGACGGCCCGAGCGAAGTGCACCGCATGAGCCTgg < 4:42071/149‑1 (MQ=255) cgcTGTGGCGGGTGGTCGATCGTTGCGTCCAGGTATTGGGTGGACGCGGGGTGACCGGGGACACCGTGGTGGAGCGGATCTTCCGCGACATTCGCCCGTTCCGCATCTATGACGGCCCGAGCGAAGTGCACCGCATGAGCCTGGCgaag < 6:23569/149‑1 (MQ=255) cTGTGGCGGGTGGTCGATCGTTGCGTCCAGGTATTGGGTGGACGCGGGGTGACCGGGGACACCGTGGTGGAGCGGATCTTCCGCGACATTCGCCCGTTCCGCATCTATGACGGCCCGAGCGAAGTGCACCGCATGAGCCTGGCgaagaa < 6:181594/149‑1 (MQ=255) cTGTGGCGGGTGGTCGATCGTTGCGTCCAGGTATTGGGTGGACGCGGGGTGACCGGGGACACCGTGGTGGAGCGGATCTTCCGCGACATTCGCCCGTACCGCATCTATGACGGCCCGAGCGAAGTGCACCGCATGAGCCTGGCgaagaa < 2:25556/149‑1 (MQ=255) tgGCGGGTGGTCGATCGTTGCGTCCAGGTATTGGGTGGACGCGGGGTGACCGGGGACACCGTGGTGGAGCGGATCTTCCGCGACATTCGCCCGTTCCGCATCTATGACGGCCCGAGCGAAGTGCACCGCATGAGCCTGGCGAAGAAgc < 8:308016/148‑1 (MQ=255) tCGATCGTTGCGTCCAGGTATTGGGTGGACGCGGGGTGACCGGGGACACCGTGGTGGAGCGGATCTTCCGCGACATTCGCCCGTTCCGCATCTATGACGGCCCGAGCGAAGTGCACCGCATGAGCCTGGCGAAGAAGCTGCTCGACCAg > 5:364527/1‑149 (MQ=255) cgtcacggTTTTGGTTGGTCGAGTGGTGACCGTGGTCACCGTGGTGGAGCGGATCTTGCGCTACATTCGCCCGTTCCGCATCTATGACGTCCCGAGCGTAGTGCACGGCATGAGCCTGGCGAAGACGCTGCTCGACCAGCG‑CCTGGAg < 3:257450/142‑1 (MQ=255) cGTCCAGGTATTGGGTGGACGCGGGGTGACCGGGGACACCGTGGTGGAGCGGATCTTCCGCGACATTCGCCCGTTCCGCATCTATGATGGCCCGAGCGAAGTGCACCGCATGAGCCTGGCGAAGAAGCTGCTCGACCAGCG‑CCTGGAg < 3:377661/148‑1 (MQ=255) cGTCCAGGTATTGGGTGGACGCGGGGTGACCGGGGACACCGTGGTGGAGCGGATCTTCCGCGACATTCGCCCGTTCCGCATCTATGACGGCCCGAGCGAAGTGCACAGCATGAGCCTGGCGAAGAAGCTGCTCGACCAGCG‑CCTGGAgg > 7:163497/1‑149 (MQ=255) aGGTATTGGGTGGACGCGGGGTGACCGGGGACACCGTGGTGGAGCGGATCTTCCGCGACATTCGCCCGTTCCGCATCTATGACGGCCCGAGCGAAGTGCACCGCATGAGCCTGGCGAAGAAGCTGCTCGACCAGCG‑CCTGGAGGCCCAc > 3:356217/1‑149 (MQ=255) gTATTGGGTGGACGCGGGGTGACCGGGGACACCGTGGTGGAGCGGATCTTCCGCGACATTCGCCCGTTCCGCATCTACGACGGCCCGAGCGAAGTGCACCGCATGAGCCTGGCGAAGAAGCTGCTCGACCAGCG‑CCTGGAGGCCCACt > 4:118787/1‑148 (MQ=255) ttGGGTGGACGCGGGGTGACCGGGGACACCGTGGTGGAGCGGATCTTCCGCGACATTCGCCCGTTCCGCATCTATGACGGCCCGAGCGAAGTGCACCGCATGAGCCTGGCGAAGAAGCTGCTCGACCAGCG‑CCTGGAGGCCCACTGATg < 5:199110/149‑1 (MQ=255) ggTGGACGCGGGGTGACCGGGGACACCGTGGTGGAGCGGATCTTCCGCGACATTCGCCCGTTCCGCATCTATGACGGCCCGAGCGAAGTGCACCGCATGAGCCTGGCGAAGAAGCTGCTCGACCAGCG‑CCTGGAGGCCCACTGATGCAg > 1:197552/1‑149 (MQ=255) gTGGACGCGGGGTGACCGGGGACACCGTGGTGGAGCGGATCTTCCGCGACATTCGCCCGTTCCGCATCTATGACGGCCCGAGCGAAGTGCACCGCATGAGCCTGGCGAAGAAGCTGCTCGACCAGCG‑CCTGGAGGCCCACTGATGCAGc < 6:240414/149‑1 (MQ=255) gTGGACGCGGGGTGACCGGGGACACCGTGGTGGAGCGGATCTTCCGCGACATTCGCCCGTTCCGCATCTATGACGGCCCGAGCGAAGTGCACCGCATGAGCCTGGCGAAGAAGCTGCTCGACCAGCG‑CCTGGAGGCCCACTGATGCAGc < 4:289101/149‑1 (MQ=255) gTGGACGCGGGGTGACCGGGGACACCGTGGTGGAGCGGATCTTCCGCGACATTCGCCCGTTCCGCATCTATGACGGCCAGAGCGAAGTGCACCGCATGAGCCTGGCGAAGAAGCTGCTCGACAAGCG‑CCTGGAGGCCCACTGATGCAga > 7:198555/1‑148 (MQ=255) gcgGGGTGACCGGGGACACCGTGGTGGAGCGGATCTTCCGCGACATTCGCCCGTTCCGCATCTATGACGGCCCGAGCGAAGTGCACCGCATGAGCCTGGCGAAGAAGCTGCTCGACCAGCG‑CCTGGAGGCCCACTGATGCAGCCGAAcc > 5:335659/1‑149 (MQ=255) ggggTGACCGGGGACACCGTGGTGGAGCGGATCTTCCGCGACATTCGCCCGTTCCGCATCTATGACGGCCCGAGCGAAGTGCACCGCATGAGCCTGGCGAAGAAGCTGCTCGACCAGCG‑CCTGGAGGCCCACTGATGCAGCCGAACCtt > 4:251373/1‑149 (MQ=255) ggTGACCGGGGACACCGTGGTGGAGCGGATCTTCCGCGACATTCGCCCGTTCCGCATCTATGACGGCCCGAGCGAAGTGCACCGCATGAGCCTGGCGAAGAAGCTGCTCGACCAGCG‑CCTGGAGGCCCACTGATGCAGCCGAACCTTGc > 1:71383/1‑149 (MQ=255) tGACCGGGGACACCGTGGTGGAGCGGATCTTCCGCGACATTCGCCCGTTCCGCATCTATGACGGCCCGAGCGAAGTGCTCCGCATGAGCCTGGCGAAGAAGCTGCTCGACCAGCG‑CCTGGAGGCCCACTGATGCAGCCGAACCTTGccc > 7:248690/1‑149 (MQ=255) gCGGATCTTCCGCGACATTCGCCCGTTCCGCATCTATGACGGCCCGAGCGAAGTGCACCGCATGAGCCTGGCGAAGAAGCTGCTCGACCAGCG‑CCTGGAGGCCCACTGATGCAGCCGAACCTTGCCCGACTGTTCGCCCTCGACGGGCg > 2:114189/1‑149 (MQ=255) gCGGATCTTCCGCGACATTCGCCCGTTCCGCATCTATGACGGCCCGAGCGAAGTGCACCGCATGAGCCTGGCGAAGAAGCTGCTCGACCAGCG‑CCTGGAGGCCCACTGATGCAGCCGAACCTTGCCCGACTGTTCGCCCTCGACGGGCg > 7:109225/1‑149 (MQ=255) aTCTTCCGCGACATTCGCCCGTTCCGCATCTATGACGGCCCGAGCGAAGTGCACCGCATGAGCCTGGCGAAGAAGCTGCTCGACCAGCG‑CCTGGAGGCCCACTGATGCAGCCGAACCTTGCCCGACTGTTCGCCCTCGACGGGCGTcgc > 5:207270/1‑149 (MQ=255) ccGCGACATTCGCCCGTTCCGCATCTATGACGGCCCGAGCGAAGTGCACCGCATGAGCCTGGCGAAGAAGCTGCTCGACCAGCG‑CCTGGAGGCCCACTGATGCAGCCGAACCTTGCCCGACTGTTCGCCCTCGACGGGCGTcgc < 2:197552/144‑1 (MQ=255) ccGCGACATTCGCCCGTTCCGCATCTATGACGGCCCGAGCGAAGTGCACCGCATGAGCCTGGCGAAGAAGCTGCTCGACCAGCG‑CCTGGAGGCCCACTGATGCAGCCGAACCTTGCCCGACTGTTCGCCCTCGACGGGCGTCGCGcc < 3:251373/147‑1 (MQ=255) cgcgACATTCGCCCGTTCCGCATCTATGACGGCCCGAGCGAAGTGCACCGCATGAGCCTGGCGAAGAAGCTGCTCGACCAGCG‑CCTGGAGGCCCACTGATGCAGCCGAACCTTGCCCGACTGTTCGCCCTCGACGGGCGTCGCGCCCt < 6:364527/148‑1 (MQ=255) cgcgACATTCGCCCGTTCCGCATCTATGACGGCCCGAGCGAAGTGCACCGCATGAGCCTGGCGAAGAAGCTGCTCGACCAGCG‑CCTGGAGGCCCACTGATGCAGCCGAACCTTGCCCGACTGTTCGCCCTCGACGGGCGTCGCGCCCTg < 8:248690/149‑1 (MQ=255) gcgACATTCGCCCGTTCCGCATCTATGACGGCCCGAGCGAAGTGCACCGCATGAGCCTGGCGAAGAAGCTGCTCGACCAGCG‑CCTGGAGGCCCACTGATGCAGCCGAACCTTGCCCGACTGTTCGCCCTCGACGGGCGTCGCGCCCTgg > 1:341854/1‑149 (MQ=255) cttcgctcgggccgtcatagatgcggaacgggcgaaGTGCACCGCATGAGCCTGGCGAAGAAGCTGCTCGACCAGCG‑CCTGGAGGCCCACTGATGCAGCCGAACCTTGCCCGACTGTTCGCCCTCGACGGGCGTCGCGCCCTgg > 5:10302‑M2/37‑144 (MQ=255) cttcgctcgggccgtcatagatgcggaacgggcgaaGTGCACCGCATGAGCCTGGCGAAGAAGCTGCTCGACCAGCG‑CCTGGAGGCCCACTGATGCAGCCGAACCTTGCCCGACTGTTCGCCCTCGACGGGCGTCGCGCCCTgg < 6:10302‑M2/108‑1 (MQ=255) aTTCGCCCGTTCCGCATCTATGACGGCCCGAGCGAAGTGCACCGCATGAGCCTg > 1:82415/1‑54 (MQ=255) aTTCGCCCGTTCCGCATCTATGACGGCCCGAGCGAAGTGCACCGCATGAGCCTg < 2:82415/54‑1 (MQ=255) ttcgctcgggccgtcatagatgcggaacgggcgaaGTGCACCGCATGAGCCTGGCGAAGAAGCTGCTCGACCAGCG‑CCTGGAGGCCCACTGATGCAGCCGAACCTTGCCCGACTGTTCGCCCTCGACGGGCGTCGCGCCCTGGTGACCg > 3:271020‑M2/36‑149 (MQ=255) CGCCCGTTCCGCATCTATGCCGGCCCGAGCGAAGTGCACCGCATGAGCCTGGCGAAGAAGCTGCTCGACCAGCG‑CCTGGAGGCCCACTGCTGCAGCCGAACCTTGCCCGACTGTTCGCCCTCGACGGGCGTCGCGCCCTGGTGACCgg > 3:6187‑M1/1‑148 (MQ=255) CGCCCGTTCCGCATCTATGACGGCCCGAGCGAAGTGCACCGCATGAGCCTGGCGAAGAAGCTGCTCGACCAGCG‑CCTGGAGGCCCACTGATGCAGCCGAACCTTGCCCGACTGTTCGCCCTCGACGGGCGTCGCGCCCTGGTGACCgg > 1:201307‑M1/1‑148 (MQ=255) ctcgggccgtcatagatgcggaacgggcgaaGTGCACCGCATGAGCCTGGCGAAGAAGCTGCTCGACCAGCG‑CCTGGAGGCCCACTGATGCAGCCGAACCTTGCCCGACTGTTCGCCCTCGACGGGCGTCGCGCCCTGGTGACCGGGGc > 1:226707‑M2/32‑149 (MQ=255) ccGCATCTATGCCGGCCCGAGCGAAGTGCACCGCATGAGCCTGGCGAAGAAGCTGCTCGACCAGCG‑CCTGGAGGCCCACTGATGCAGCCGAACCTTGCCCGACTGTTCGCCCTCGACGGGCGTCGCGCCCTGGTGACCGGGGCCTCCa < 6:335659/148‑1 (MQ=255) ccGCATCTATGACGGCCCGAGCGAAGTGCACCGCATGAGCCTGGCGAAGAAGCTGCTCGACCAGCG‑CCTGGAGGCCCACTGATGCAGCCGAACCTTGCCCGACTGTTCGCCCTCGACGGGCGTCGCGCCCTGGTGACCGGGGCCTCCAg > 8:127538/1‑149 (MQ=255) gCATCTATGACGGCCCGAGCGAAGTGCACCGCATGAGCCTGGCGAAGAAGCTGCTCGACCAGCG‑CCTGGAGGCCCACTGATGCAGCCGAACCTTGCCCGACTGTTCGCCCTCGACGGGCGTCGCGCCCTGGTGACCGGGGCCTCCAGCg > 3:200319/1‑149 (MQ=255) gCATCTATGACGGCCCGAGCGAAGTGCACCGCATGAGCCTGGCGAAGAAGCTGCTCGACCAGCG‑CCTGGAGGCCCACTGATGCAGCCGAACCTTGCCCGACTGTTCGCCCTCGACGGGCGTCGCGCCCTGGTGACCGGGGCCTCCAGCg < 2:341854/149‑1 (MQ=255) aTGACGGCCCGAGCGAAGTGCACCGCATGAGCCTGGCGAAGAAGCTGCTCGACCAGCG‑CCTGGAGGCCCACTGATGCAGCCGAACCTTGCCCGACTGTTCGCCCTCGACGGGCGTCGCGCCCTGGTGACCGGGGCCTCCAGCGGCCTgg > 6:76144/1‑149 (MQ=255) aTGACGGCCCGAGCGAAGTGCACCGCATGAGCCTGGCGAAGAAGCTGCTCGACCAGCG‑CCTGGAGGCCCACTGATGCAGCCGAACCTTGCCCGACTGTTCGCCCTCGACGGGCGTCGCGCCCTGGTGACCGGGGCCTCCAGCGGCCTgg > 5:272370/1‑149 (MQ=255) aCGGCCCGAGCGAAGTGCACCGCATGAGCCTGGCGAAGAAGCTGCTCGACCAGCGATCTGGAGGCCCACTGATGCAGCCGAACCTTGCCCGACTGTTCGCCCTCGACGGGCGTCGCGCCCTGGTGACCGGGGCCTCCAGCGGCCTGGGc > 1:301030/1‑149 (MQ=255) gCCCGAGCGAAGTGCACCGCATGAGCCTGGCGAAGAAGCTGCTCGACCAGCG‑CCTGGAGGCCCACTGATGCAGCCGAACCTTGCCCGACTGTTCGCCCTCGACGGGCGTCGCGCCCTGGTGACCGGGGCCTCCAGCGGCCTGGGCCGt > 2:120344/1‑148 (MQ=255) ccGAGCGAAGTGCACCGCATGAGCCTGGCGAAGAAGCTGCTCGACCAGCG‑CCTGGAGGCCCACTGATGCAGCCGAACCTTGCCCGACTGTTCGCCCTCGACGGGCGTCGCGCCCTGGTGACCGGGGCCTCCAGCGGCCTGGGc < 1:86308/143‑1 (MQ=255) ccGAGCGAAGTGCACCGCATGAGCCTGGCGAAGAAGCTGCTCGACCAGCG‑CCTGGAGGCCCACTGATGCAGCCGAACCTTGCCCGACTGTTCGCCCTCGACGGGCGTCGCGCCCTGGTGACCGGGGCCTCCAGCGGCCTGGGc > 2:86308/1‑143 (MQ=255) aGCGAAGTGCACCGCATGACCCTGGCGAAGAAGCTGCGCGACCAGCG‑CCTGGAGGCCCACTGATGCAGCCGAACCTTGCCCGACTGTTCGCCCTCGACGGGCGTCGCGCCCTGGTGACCGGGGCCTCCAGCGGCCTGGGCCGTCACTTc < 5:300597/149‑1 (MQ=255) cgaaGTGCACCGCATGAGCCTGGCGAAGAAGCTGCTCGACCAGCG‑CCTGGAGGCCCACTGATGCAGCCGAACCTTGCCCGACTGTTCGCCCTCGACGGGCGTCGCGCCCTGGTGACCGGGGCCTCCAGCGGCCTGGGCCGTCACTTCGc < 6:207270‑M2/145‑1 (MQ=255) aaGTGCACCGCATGAGCCTGGCGAAGAAGCTGCTCGACCAGCG‑CCTGGAGGCCCACTGATGCAGCCGAACCTTGCCCGACTGTTCGCCCTCGACGGGCGTCGCGCCCTGGTGACCGGGGCCTCCAGCGGCCTGGGCCGTCACTTCGCCa > 8:101705‑M2/3‑149 (MQ=255) | GCCAAGGTGATCAGCGCCGAGGCGCTGTGGCGGGTGGTCGATCGTTGCGTCCAGGTATTGGGTGGACGCGGGGTGACCGGGGACACCGTGGTGGAGCGGATCTTCCGCGACATTCGCCCGTTCCGCATCTATGACGGCCCGAGCGAAGTGCACCGCATGAGCCTGGCGAAGAAGCTGCTCGACCAGCG‑CCTGGAGGCCCACTGATGCAGCCGAACCTTGCCCGACTGTTCGCCCTCGACGGGCGTCGCGCCCTGGTGACCGGGGCCTCCAGCGGCCTGGGCCGTCACTTCGCCA > NC_002947/3183310‑3183603 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |