New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3543866 =	49 (0.790)	3 (0.050)	3/254	NT	5.6%	coding (1569/2607 nt)	PP_3130	hypothetical protein
	?	NC_002947	3543902 =	55 (0.930)					coding (1533/2607 nt)	PP_3130	hypothetical protein

CGACCTGACCTGGCGTGCCTGGGAGCATGGGCCGTCGAAGCTGTTGCTCAACGAGCTGGAACAACGCTTCAATGCCGACATGATCGCCCACTTGCGCAGCGTGGGCGTGAAAGTCCCCATTGCTACCACCAGCACCTGGGGCGGTAATGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/3544016‑3543866 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aatgggGACTTTCACGCCCACGCTGCGCAAGTGGGCGATCATGTCGGCATTGAAGCGTTGTTCCAGCTCGTTGAGCAACAGCTTCGACGGCCCATGCTCCCAGGCACGCCAGGTCAGGTCGGCGGGTAGGTCAAACTGTTTGGCAAAGGC  >  NC_002947/3543902‑3544045                                                                                                                                                                                                                                                                                                         CGACCTGACCTGGCGTGCCTGGGAGCATGGGCCGTCGAAGCTGTTGCTCAACGAGCTGGAACAACGCTTCAATGCCGACATGATCGCCCACTTGCGCAGCGTGGGCGTGAAAGTCCCCATTGCTACCACCAGCACCTGGGGCGGTAATG                                                                                                                                                    <  5:360048/149‑1                                                                                                              AAAGTCCCCATTGCTACCACCAGCACCTGGGGCGGTAATGGGGACTTTCACGCCCACGCTGCGCAAGTGGGCGATCATGTCGGCATTGAAGCGTTGT                                                                                           >  3:269572/1‑97                                                                                                              AAAGTCCCCATTGCTACCACCAGCACCTGGGGCGGTAATGGGGACTTTCACGCCCACGCTGCGCAAGTGGGCGATCATGTCGGCATTGAAGCGTTGT                                                                                           <  4:269572/97‑1                                                                                                                  TCCCCATTGCTACCACCAGCACCTGGGCCGGTAATGGGGACTTTCACGCCCACGCTGCGCAAGTGGGCGATCATGTCGGCATTCAAGCGTTGTTCCAGCACGATGCGCAACAGCTTCGACGGCCCAAGCTCCCAGGCACGCCAGcacag                                   >  8:75412/1‑144                                                                                                                                                   ATGGGGACTTTCACGCCCACGCTGCGCAAGTGGGCGATCATGTCGGCATTGAAGCGTTGTTCCAGCTCGTTGAGCAACAGCTTCGACGGCCCATGCTCCCAGGCACGCCAGGTCAGGTCGGCGGGTAGGTCAAACTGTTTGGCAAAGGC  <  5:254345/149‑1                                                                                                                                                                                                                                                                                                         CGACCTGACCTGGCGTGCCTGGGAGCATGGGCCGTCGAAGCTGTTGCTCAACGAGCTGGAACAACGCTTCAATGCCGACATGATCGCCCACTTGCGCAGCGTGGGCGTGAAAGTCCCCATTGCTACCACCAGCACCTGGGGCGGTAATGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/3544016‑3543866 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aatgggGACTTTCACGCCCACGCTGCGCAAGTGGGCGATCATGTCGGCATTGAAGCGTTGTTCCAGCTCGTTGAGCAACAGCTTCGACGGCCCATGCTCCCAGGCACGCCAGGTCAGGTCGGCGGGTAGGTCAAACTGTTTGGCAAAGGC  >  NC_002947/3543902‑3544045

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.