New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3543866 =	49 (0.790)	3 (0.050)	3/254	NT	5.6%	coding (1569/2607 nt)	PP_3130	hypothetical protein
	?	NC_002947	3543902 =	55 (0.930)					coding (1533/2607 nt)	PP_3130	hypothetical protein

TCCAGTCGATCATGCCGTCGCTGGTCAGCGGGTTCTTCTCCAGTTGGCCTGTGTCGCCGTAGCTGTGGGCGTCGATGACATCGCCAACGCTCAATGCCGGCAGTGCGCTAAGCCCATTACCGCCCCAGGTGCTGGTGGTAGCAATGGGGACTTTCACGCCCACGCTGCGCAAGTGGGCGATCATGTCGGCATTGAAGCGTTGTTCCAGCTCGTTGAGC‑AACAGCTTCGACGGCCCATGCTCCCAGGCACGCCAGGTCAGGTCGGCGGGTAGGTCAAACTGTTTGGCAAAGGC  >  NC_002947/3543754‑3544045                                                                                                                                                     |                                                                                                                                                 tCCAGTCGATCATGCCGTCGCTGGTCAGCGGGTTCTTCTCCAGTTGGCCTGTGTCGCCGTAGCTGTGGGCGTCGATGACATCGCCAACGCTCAATGCCGGCAGTGCGCTAAGCCCATTACCGCCCCAGGTGCTGGTGGTAGCAATgggg                                                                                                                                                  <  5:373716/149‑1 (MQ=255)  ctgtgctggcgtgcctgggagcttgggccgtcgaagctgttgcgcatcgtgctggaacaacgcttgaatgccgacatgatcgcccacttgcgcagcgtgggcgtgaaagtcCCCATTACCGGCCCAGGTGCTGGTGGTAGCAATGGGGa                                                                                                                                                 >  8:75412‑M1/112‑149 (MQ=255)   cAGTCGATCATGCCGTCGCTGGTCAGCGGGTTCTTCTCCAGTTGGCCTGTGTCGCCGTAGCTGTGGGCGTCGATGACATCGCCAACGCTCAATGCCGGCAGTGCGCTAAGCCCATTACCGCCCCAGGTGCTGGTGGTAGCAATGGGGa                                                                                                                                                 <  6:357857/148‑1 (MQ=255)        gATCATGCCGTCGCTGGTCAGCGGGTTCTTCTCCAGTTGGCCTGTGTCGCCGTAGCTGTGGGCGTCGATGACATCGCCAACGCTCAATGCCGGCAGTGCGCTAAGCCCATTACCGCCCCAGGTGCTGGTGGTAGCAATGGGGACTTTc                                                                                                                                            <  8:152414/148‑1 (MQ=255)        gATCATGCCGTCGCTGGTCAGCGGGTTCTTCTCCAGTTGGCCTGTGTCGCCGTAGCTGTGGGCGTCGATGACATCGCCAACGCTCAATGCCGGCAGTGCGCTAAGCCCATTACCGCCCCAGGTGCTGGTGGTAGCAATGGGGACTTTc                                                                                                                                            >  7:152414/1‑148 (MQ=255)               ccGTCGCTGGTCAGCGGGTTCTTCTCCAGTTGGCCTGTGTCGCCGTAGCTGTGGGCGTCGATGACATCGCCAACGCTCAATGCCGGCAGTGCGCTAAGCCCATTACCGCCCCAGGTGCTGGTGGTAGCAATGGGGACTTTCACGCCCa                                                                                                                                     <  3:1512/148‑1 (MQ=255)               ccGTCGCTGGTCAGCGGGTTCTTCTCCAGTTGGCCTGTGTCGCCGTAGCTGTGGGCGTCGATGACATCGCCAACGCTCAATGCCGGCAGTGCGCTAAGCCCATTACCGCCCCAGGTGCTGGTGGTAGCAATGGGGACTTTCACGCCCAc                                                                                                                                    >  6:80834/1‑149 (MQ=255)                    gCTGGTCAGCGGGTTCTTCTCCAGTTGGCCTGTGTCGCCGTAGCTGTGGGCGTCGATGACATCGCCAACGCTCAATGCCGGCAGTGCGCTAAGCCCATTACCGCCCCAGGTGCTGGTGGTAGCAATGGGGACTTTCACGCCCACGCTgc                                                                                                                               >  2:284708/1‑149 (MQ=255)                     cTGGTCAGCGGGTTCTTCTCCAGTTGGCCTGTGTCGCCGTAGATGTGGGCGTCGATGACATCGCCAACGCTCAATGCCGGCAGTGCGCTAAGCCCATTACAGCCCCAGGTGCTGGTGGTAGCAATGGGGACTTTCACGCCCACGCTgc                                                                                                                               >  3:326860/1‑148 (MQ=255)                        gTCAGCGGGTTCTTCTCCAGTTGGCCTGTGTCGCCGTAGCTGTGGGCGTCGATGACATCGCCAACGCTCAATGCCGGCAGTGCGCTAAGCCCATTACCGCCCCAGGTGCTGGTGGTAGCAATGGGGACTTTCACGCCAACGCTgcgc                                                                                                                             >  8:335408/1‑147 (MQ=255)                         tCAGCGGGTTCTTCTCCAGTTGGCCTGTGTCGCCGTAGCTGTGGGCGTCGATGACATCGCCAACGCTCAATGCCGGCAGTGCGCTAAGCCCATTACCGCCCCAGGTGCTGGTGGTAGCAATGGGGACTTTCACGCCCACGCTGCGCAAg                                                                                                                          >  2:136536/1‑149 (MQ=255)                                   cttctCCAGTTGGCCTGTGTCGCCGTAGCTGTGGGCGTCGATGACATCGCCAACGCTCAATGCCGGCAGTGCGCTAAGCCCATTACCGCCCCAGGTGCTGGTGGTAGCAATGGGGACTTTCACGCCCACGCTGCGCAAGTGGGCGATc                                                                                                                 <  7:193969/148‑1 (MQ=255)                                   cttctCCAGTTGGCCTGTGTCGCCGTAGCTGTGGGCGTCGATGACATCGCCAACGCTCAATGCCGGCAGTGCGCTAAGCCCATTACCGCCCCAGGTGCTGGTGGTAGCAATGGGGACTTTCACGCCCACGCTGCGCAAGTGGGCGATc                                                                                                                 <  2:329728/148‑1 (MQ=255)                                       tcCAGTTGGCCTGTGTCGCCGTAGCTGTGGGCGTCGATGACATCGCCAACGCTCAATGCCGGCAGTGCGCTAAGCCCATTACCGCCCCAGGTGCTGGTGGTAGCAATGGGGACTTTCACGCCCACGCTGCGCAAGTGGGCGATCATGTc                                                                                                            >  6:254345/1‑149 (MQ=255)                                        ccAGTTGGCCTGTGTCGCCGTAGCTGTGGGCGTCGATGACATCGCCAACGCTCAATGCCGGCAGTGCGCTAAGCCCATTACCGCCCCAGGTGCTGGTGGTAGCAATGGGGACTTTCACGCCCACGCTGCGCAAGTGGGCGATCATGTCg                                                                                                           >  2:389855/1‑149 (MQ=255)                                         ccgTTGGCCTGTGTCGCCGTAGCTGTGGGCGTCGATGACATCGCCAACGCTCAATGCCGGCAGTGCGCTAAGCCCATTACCGCCCCAGGTGCTGGTGGTAGCAATGGGGACTTTCACGCCCACGCTGCGCAAGTGGGCGATCATGTc                                                                                                            <  4:226682/145‑1 (MQ=255)                                                ccTGTGTCGCCGTAGCTGTGGGCGTCGATGACATCGCCAACGCTCAATGCCGGCAGTGCGCTAAGCCCATTACCGCCCCAGGTGCTGGTGGTAGCAATGGGGACTTTCACGCCCACGCTGCGCAAGTGGGCGATCATGTCGGCATTGaa                                                                                                   <  7:10562/149‑1 (MQ=255)                                                 cTGTGTCGCCGTAGCTGTGGGCGTCGATGACATCGCCAACGCTCAATGCCGGCAGTGCGCTAAGCCCATTACCGCCCCAGGTGCTGGTGGTAGCAATGGGGACTTTCACGCCCACGCTGCGCAAGTGGGCGATCATGTCGGCATTGAAg                                                                                                  >  7:294712/1‑149 (MQ=255)                                                 cTGTGTCGCCGTAGCTGTGGGCGTCGATGACATCGCCAACGCTCAATGCCGGCAGTGCGCTAAGCCCATTACCGCCCCAGGTGCTGGTGGTAGCAATGGGGACTTTCACGCCCACGCTGCGCAAGTGGGCGATCATGTCGGCATTGAAg                                                                                                  >  7:336493/1‑149 (MQ=255)                                                          acaacgcttcaatgccgacatgatcgcccacttgcgcagcgtgggcgtgaaagtcCCCATTACCGCCCCAGGTGCTGGTGGTAGCAATGGGGACttt                                                                                                                                             >  3:269572‑M1/56‑97 (MQ=255)                                                          acaacgcttcaatgccgacatgatcgcccacttgcgcagcgtgggcgtgaaagtcCCCATTACCGCCCCAGGTGCTGGTGGTAGCAATGGGGACttt                                                                                                                                             <  4:269572‑M1/42‑1 (MQ=255)                                                                  tgGGCGTCGATGACATCGCCTACGGTCAATGCCGGCAGTGCTCTAAGCCCATTACCGCCGCAGGTTCTGGTGGTAGCATTGGGTACTTTCACGCCGACGCTGCGCAAGTGGGCGTTCATGTCGGCATTGAAGCGTTGTTCCAGCTCttt                                                                                 <  8:99763/149‑1 (MQ=255)                                                                  tgGGCGTCGATGACATCGCCAACGCTCAATGCCGGCAGTGCGCTAAGCCCATTACCGCCCCAGGTGCTGGTGGTAGCAATGGGGACTTTCACGCCCACGCTGCGCAAGTGGGCGATCATGTCGGCATTGAAGCGTTGTTCCAGCTCGtt                                                                                 >  6:169733/1‑149 (MQ=255)                                                                          gATGACATCGCCAACGCTCAATGCCGGCAGTGCGCTAAGCCCATTACCGCCCCAGGTGCTGGTGGTAGCAATGGGGACTTTCACGCCCACGCTGCGCAAGTGGGCGATCATGTCGGCATTGAAGCGATCTTCCAGCTCGTTGAGC‑AACa                                                                        >  2:111131/1‑149 (MQ=255)                                                                             gACATCGCCAACGCTCAATGCCGGCAGTGCGCTAAGCCCATTACCGCCCCAGGTGCTGGTGGTAGCAATGGGGACTTTCACGCCCACGCTGCGCAAGTGGGCGATCATGTCGGCATTGAAGCGTTGTTCCAGCTCGTTGAGC‑AACAGCt                                                                     >  4:245195/1‑149 (MQ=255)                                                                              aCATCGCCAACGCTCAATGCCGGCAGTGCGCTAAGCCCATTACCGCCCCAGGTGCTGGTGGTAGCAATGGGGACTTTCACGCCCACGCTGCGCAAGTGGGCGATCATGTCGGCATTGAAGCGTTGTTCCAGCTCGTTGAGC‑AACAGCtt                                                                    >  1:247115/1‑149 (MQ=255)                                                                                aTCGCCAACGCTCAATGCCGGCAGTGCGCTAAGCCCATTACCGCCCCAGGTGCTGGTGGTAGCAATGGGGACTTTCACGCCCACGCTGCGCAAGTGGGCGATCATGTCGGCATTGAAGCGTTGTTCCa                                                                                        >  7:180688/1‑128 (MQ=255)                                                                                aTCGCCAACGCTCAATGCCGGCAGTGCGCTAAGCCCATTACCGCCCCAGGTGCTGGTGGTAGCAATGGGGACTTTCACGCCCACGCTGCGCAAGTGGGCGATCATGTCGGCATTGAAGCGTTGTTCCa                                                                                        <  8:180688/128‑1 (MQ=255)                                                                                 tCGCCAACGCTCAATGCCGGCAGTGCGCTAAGCCCATTACCGCCCCAGGTGCTGGTGGTAGCAATGGGGACTTTCACGCCCACGCTGCGCAAGTGGGCGATCATGTCGGCATTGAAGCGTTGTTCCAGCTCGTTGAGC‑AACAGCTTCGa                                                                 <  1:136536/149‑1 (MQ=255)                                                                                   gCCAACGCTCAATGCCGGCAGTGCGCTAAGCCCATTACCGCCCCAGGTGCTGGTGGTAGCAATGGGGACTTTCACGCCCACGCTGCGCAAGTGGGCGATTATGTCGGCATTGAAGCGTTGTTCCAGCTCGTTGAGC‑AACAGCTTCGACg                                                               <  1:284708/149‑1 (MQ=255)                                                                                   gCCAACGCTCAATGCCGGCAGTGCGCTAAGCCCATTACCGCCCCAGGTGCTGGTGGTAGCAATGGGGACTTTCACGCCCACGCTGCGCAAGTGGGCGATCATGTCGGCATTGAAGCGTTGTTCCAGCTCGTTGAGC‑AACAGCTTCGACg                                                               <  8:294712/149‑1 (MQ=255)                                                                                   gCCAACGCTCAATGCCGGCAGTGCGCTAAGCCCATTACCGCCCCAGGTGCTGGTGGTAGCAATGGGGACTTTCACGCCCACGCTGCGCAAGTGGGCGATCATGTCGGCATTGAAGCGTTGTTCCAGCTCGTTGAGC‑AACAGCTTCGACg                                                               >  5:237900/1‑149 (MQ=255)                                                                                      aaCGCTCAATGCCGGCAGTGCGCTAAGCCCATTACCGCCCCAGGTGCTGGTGGTAGCAATGGGGACTTTCACGCCCACGCTGCGCAAGTGGGCGATCATGTCGGCATTGAAGCGTTGTTCCAGCTCGTTGAGC‑AACAGCTTCGACGGcc                                                            <  8:336493/149‑1 (MQ=255)                                                                                      aaCGCTCAATGCCGGCAGTGCGCTAAGCCCATTACCGCCCCAGGTGCTGGTGGTAGCAATGGGGACTTTCACGCCCACGCTGCGCAAGTGGGCGATCATGTCGGCATTGAAGCGTTGTTCCAGCTCGTTGAGC‑AACAGCTTCGACGGcc                                                            >  1:163204/1‑149 (MQ=255)                                                                                      aaCGCTCAATGCCGGCAGTGCGCTAAGCCCATTACCGCCCCAGGTGCTGGTGGTAGAAGTGTGGACTTTCACGCCCACGCTGCGCAAGTGGGCGATCATGTCGGCATTGAAGCGTTGTTCCAGCTCGTTGAGC‑AACATCTTCGACGGcc                                                            <  6:108587/149‑1 (MQ=255)                                                                                          cTCAATGCCGGCAGTGCGCTAAGCCCATTACCGCCCCAGGTGCTGGTGGTAGCAATGGGGACTTTCACGCCCACGCTGCGCAAGTGGGCGATCATGTCGGCATTGAAGCGTTGTTCCAGCTCGTTGAGC‑AACAGCTTCGACGGCCCAt                                                         >  1:249723/1‑148 (MQ=255)                                                                                            cAATGCCGGCAGTGCGCTAAGCCCATTACCGCCCCAGGTGCTGGTGGTAGCAATGGGGACttt                                                                                                                                             >  8:313124/1‑63 (MQ=255)                                                                                            cAATGCCGGCAGTGCGCTAAGCCCATTACCGCCCCAGGTGCTGGTGGTAGCAATGGGGACttt                                                                                                                                             <  7:313124/63‑1 (MQ=255)                                                                                             aaTGCCGGCAGTGCGCTAAGCCCATTACCGCCCCAGGTGCTGGTGGTAGCAATGGGGACTTTCACGCCCACGCTGCGCAAGTGGGCGATCATGTCGGCATTGAAGCGTTGTTCCAGCTCGTTGAGC‑AACAGCTTCGACGGCCCATGCTc                                                     >  1:95213/1‑149 (MQ=255)                                                                                              aTGCCGGCAGTGCGCTAAGCCCATTACCGCCCCAGGTGCTGGTGGTAGCAATGGGGACTTTCACGCCCACGCTGCGCAAGTGGGCGATCATGTCGGCAATGAAGCGTTGTTCCAGCTCGTTAAGC‑AACAGCTTCGACGGCCCATGCTcc                                                    >  1:323499/1‑149 (MQ=255)                                                                                                 ccGGCAGTGCGCTAAGCCCATTACCGCCCCAGGTGCTGGTGGTAGCAATGGGGACTTTCACGCCCACGCTGCGCAAGTGGGCGATCATGTCGGCATTGAAGCGTTGTTCCAGCTCGTTGAGC‑AACAGCTTCGACGGCCCATGCTCCCAg                                                 >  6:285800/1‑149 (MQ=255)                                                                                                 ccGGCAGTGCGATCAGCCCATTACCGCCCCAGGTGCTGGTGGTAGCAATGGGGACTTTCACGCCCACGCTGCGCAAGTGGGCGATCATGTCGGCATTTAAGCGTTGTTCCAGCTCTTTGAGC‑AACTGCTTCGACGGCCCATGCTCCCa                                                  <  8:340276/148‑1 (MQ=255)                                                                                                           gcTAAGCCCATTACCGCCCCAGGTGCTGGTGGTAGCAATGGGGACTTTCACGCCCACGCTGCGCAAGTGGGCGATCATGTCGGCATTGAAGCGTTGTTCCAGCTCGTTGAGC‑AACAGCTTCGACGGCCCATGCTCCCAGGCACGCcagg                                       <  1:389855/149‑1 (MQ=255)                                                                                                           aaagtccccattgctaccaccagcacctggggcggtaatgggGACTTTCACGCCCACGCTGCGCAAGTGGGCGATCATGTCGGCATTGAAGCgttgt                                                                                            <  4:269572‑M2/55‑1 (MQ=255)                                                                                                           aaagtccccattgctaccaccagcacctggggcggtaatgggGACTTTCACGCCCACGCTGCGCAAGTGGGCGATCATGTCGGCATTGAAGCgttgt                                                                                            >  3:269572‑M2/43‑97 (MQ=255)                                                                                                               tccccattgctaccaccagcacctgggccggtaatgggGACTTTCACGCCCACGCTGCGCAAGTGGGCGATCATGTCGGCATTCAAGCGTTGTTCCAGCACGATGCGC‑AACAGCTTCGACGGCCCAAGCTCCCAGGcacgccagcacag                                   >  8:75412‑M2/39‑144 (MQ=255)                                                                                                               aGCCCATTACCGCCCCATGTGCTGGTGGTAGCAATGGGGACTTTCACGCCCACGCTGCGCAAGTGGGCGATCATGTCGGCATTGAAGCGTTGTTCCAGCTCGTTGAGC‑AACAGCTTCGACGGCCCATGCTCCCAGGCACGCcaggtca                                    <  2:249723/148‑1 (MQ=255)                                                                                                               aGCCCATTACCGCCCCAGGTGCTGGTGGTAGCAATGGGGACTTTCACGCCCACGCTGCGCAAGTGGGCGATCATGTCGGCATTGAAGCGTTGTTCCAGCTCGTTGAGC‑AACAGCTTCGACGGCCCATGCTCCCAGGCACGCcaggtc                                     <  3:245195/147‑1 (MQ=255)                                                                                                                gCCCATTACCGCCCCAGGTGCTGGTGGTAGCAATGGGGACTTTCACGCCCACGCTGCGCAAGTGGGCGATCATGTCGGCATTGAAGCGTTGTTCCAGCTCGTTGAGC‑AACAGCTTCGACGGCCCATGCTCCCAGGCACGCcaggtcagg                                  >  7:255809/1‑149 (MQ=255)                                                                                                                gCCCATTACCGCCCCAGGTGCTGGTGGTAGCAATGGGGACTTTCACGCCCACGCTGCGCAAGTGGGCGATCATGTCGGCATTGAAGCGTTGTTCCAGCTCGTTGAGC‑AACAGCTTCGACGGCCCATGCTCCCAGGCACGCcaggtcagg                                  >  4:39455/1‑149 (MQ=255)                                                                                                                   CATTACCGCCCCAGGTGCTGGTGGTAGCAATGGGGACTTTCACGCCCACGCTGCGCAAGTGGGCGATCATGTCGGCATTGAAGCGTTGTTCCAGCTCGTTGAGC‑AACAGCTTCGACGGCCCATGCTCCCAGGCACGCCAGGTCAGGTcg                               <  5:360048‑M1/149‑1 (MQ=255)                                                                                                                       aCCGCCCCAGGTGCTGGTGGTAGCAATGGGGACTTTCACGCCCACGCTGCGCAAGTGGGCGATCATGTCGGCATTGAAGCGTTGTTCCAGCTCGTTGAGC‑AACAGCTTCGACGGCCCATGCTCCCAGGCACGCCAGGTCAGGTcggcg                            <  6:360048/148‑1 (MQ=255)                                                                                                                         cgccgcTGGTGCTTGTTGTAGCAATGGGGACTTTCACGCCCACGCTTCGCAATTGGTCGATCATTTCGGCATTGAAGCGTTGTTCCAGCTCTTTTAGC‑AACAGCTTCGACGGCCCATGCTCCCATGCACTCCAGGTCAGGTCGGCTGGt                         <  4:326860/149‑1 (MQ=255)                                                                                                                          gCCCCAGGTGCTGGTGGTAGCAATGGGGACTTTCACGCCCACGCTGCGCAAGTGGGCGATCATGTCGGCATTGAAGCGTTGTTCCAGCTCGTTGAGC‑AACAGCTTCGACGGCCCATGCTCCCAGGCACGCCAGGTCAGGTCGGCGGGTa                        <  4:239921/149‑1 (MQ=255)                                                                                                                             ccAGGTGCTGGTGGTAGCAATGGGGACTTTCACGCCCACGCTGCGCAAGTGGGCGATCATGTCGGCATTGAAGCGTTGTTCCAGCTCGTTGAGC‑AACAGCTTCGACGGCCCATGCTCCCAGGCACGCCAGGTCAGGTCGGCGGGTAGGt                     <  5:169733/149‑1 (MQ=255)                                                                                                                                ggTGCTGGTGGTAGCAATGGGGACTTTCACGCCCACGCTGCGCAAGTGGGCGATCATGTCGGCATTGAAGCGTTGTTCCAGCTCGTTGAGC‑AACAGCTTCGACGGCCCATGCTCCCAGGCACGCca                                         <  2:166234/126‑1 (MQ=255)                                                                                                                                ggTGCTGGTGGTAGCAATGGGGACTTTCACGCCCACGCTGCGCAAGTGGGCGATCATGTCGGCATTGAAGCGTTGTTCCAGCTCGTTGAGC‑AACAGCTTCGACGGCCCATGCTCCCAGGCACGCca                                         >  1:166234/1‑126 (MQ=255)                                                                                                                                  ttcTGGTGGTTCCAATGGGGTCTTTCACGCCCACGGGGCGCAAGTGGGCGATCATGTCGGGATTGTATGGTTGTTCCATCTGGTTTTGCTAACAGCTTCGACGGCCCATGCTCCCAGGCACGCCAGGTCAGGTCGGCGGGTAGGTCaaa                 <  1:111131/147‑1 (MQ=255)                                                                                                                                   gCTGGTGGTAGCAATGGGGACTTTCACGCCCACGCTGCGCAAGTGGGCGATCATGTCGGCATTGAAGCGTTGTTCCAGCTCGTTGAGC‑AACAGCTTCGACGGCCCATGCTCCCAGGCACGCCAGGTCAGGTcggcgg                           <  8:181558/137‑1 (MQ=255)                                                                                                                                   gCTGGTGGTAGCAATGGGGACTTTCACGCCCACGCTGCGCAAGTGGGCGATCATGTCGGCATTGAAGCGTTGTTCCAGCTCGTTGAGC‑AACAGCTTCGACGGCCCATGCTCCCAGGCACGCCAGGTCAGGTcggcgg                           >  7:181558/1‑137 (MQ=255)                                                                                                                                       gtggtAGCAATGGGGACTTTCACGCCCACGCTGCGCAAGTGGGCGATCATGTCGGCATTGAAGCGTTGTTCCAGCTCGTTGAGC‑AACAGCTTCGACGGCCCATGCTCCCAGGCACGCCAGGTCAGGTCGGCGGGTAGGTCAAACTGttt           <  2:163204/149‑1 (MQ=255)                                                                                                                                       gtggtAGCAATGGGGACTTTCACGCCCACGCTGCGCAAGTGGGCGATCATGTCGGCATTGAAGCGTTGTTCCAGCTCGTTGAGC‑AACAGCTTCGACGGCCCATGCTCCCAGGCACGCCAGGTCAGGTCGGCGGGTAGGTCAAACTGttt           <  5:80834/149‑1 (MQ=255)                                                                                                                                        tggtAGCAATGGGGACTTTCACGCCCACGCTGCGCAAGTGGGCGATCATGTCGGCATTGAAGCGTTGTTCCAGCTCGTTGAGC‑AACAGCTTCGACGGCCCATGCTCCCAGGCACGCCAGGTCAGGTCGGCGGGTAGGTCAAACTGTTTg          <  7:335408/149‑1 (MQ=255)                                                                                                                                         ggtAGCAATGGGGACTTTCACGCCCACGCTGCGCAAGTGGGCGATCATGTCGGCATTGAAGCGTTGTTCCAGCTCGTTGAGC‑AACAGCTTCGACGGCCCATGCTCCCAGGCACGCCAGGTCAGGTCGGCGGGTAGGTCAAACTGTTTgg         >  4:352640/1‑149 (MQ=255)                                                                                                                                                atgggGACTTTCACGCCCACGCTGCGCAAGTGGGCGATCATGTCGGCATTGAAGCGTTGTTCCAGCTCGTTGAGC‑AACAGCTTCGACGGCCCATGCTCCCAGGCACGCCAGGTCAGGTCGGCGGGTAGGTCAAACTGTTTGGCAAAGGc  <  5:254345‑M2/144‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                 TCCAGTCGATCATGCCGTCGCTGGTCAGCGGGTTCTTCTCCAGTTGGCCTGTGTCGCCGTAGCTGTGGGCGTCGATGACATCGCCAACGCTCAATGCCGGCAGTGCGCTAAGCCCATTACCGCCCCAGGTGCTGGTGGTAGCAATGGGGACTTTCACGCCCACGCTGCGCAAGTGGGCGATCATGTCGGCATTGAAGCGTTGTTCCAGCTCGTTGAGC‑AACAGCTTCGACGGCCCATGCTCCCAGGCACGCCAGGTCAGGTCGGCGGGTAGGTCAAACTGTTTGGCAAAGGC  >  NC_002947/3543754‑3544045

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.