New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 3554817 = | 49 (0.790) | 3 (0.050) | 3/254 | NT | 6.4% | coding (433/1203 nt) | PP_3139 | group 1 family glycosyl transferase |
? | NC_002947 | 3554849 = | 41 (0.690) | coding (465/1203 nt) | PP_3139 | group 1 family glycosyl transferase |
CTTCAGGGCCGTGCACGGTAAAGCTGTATGCCGGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3554853‑3554817 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcccTGAAGAATTCGACAAACCACAGTTCCTGCACTTGGGTGAGAAAGTACGGCGCGCCGCCTTTGTCGCGGCGGTGAGCTCGTACGGGCGCAGCCAGTTGTACCGTTGGGTGGCGCCCGAGCAGTGGGGCAAGGTGAAGGTGGTGCATTG > NC_002947/3554849‑3554995 CTTCAGGGCCGTGCACGGTAAAGCTGTATGCCGGCCCTGAAGAATTCGACAAACCACAGTTCCTGCACTTGGGTGAGAAAGTACGGCGCGCCGCCTTTGTCGCGGCGGTGAGCTCGTACGGGCGCAGCGAGTTGTACCGTTGGGTGGCG > 7:318910/1‑149 GGGCCGTGCACGGTAAAGCTGTATGCCGGCCCTGAAGAATTCGACAAACCACAGTTCCTGCACTTGGGTGAGAAAGTACGGCGCGCCGCCTTTGTCGCGGCGGTGAGCTC < 3:178377/110‑1 GGGCCGTGCACGGTAAAGCTGTATGCCGGCCCTGAAGAATTCGACAAACCACAGTTCCTGCACTTGGGTGAGAAAGTACGGCGCGCCGCCTTTGTCGCGGCGGTGAGCTC > 4:178377/1‑110 GGCCCTGAAGAATTCGACAAACCACAGTTCCTGCACTTGGGTGAGAAAGTACGGCGAGCCGCCTTTGTCGCGGCGGTGAGCTCGTACGGGCGCAGCCAGTTGTACCGTTGGGTTGCGCGCGAGCAGTGGGGCAAGGTGAAGGTCGAGCA > 3:139098/1‑149 CCCTGAAGAATTCGACAAACCACAGTTCCTGCACTTGGGTGAGAAAGTACGGCGCGCCGCCTTTGTCGCGGCGGTGAGCTCGTACGGGCGCAGCCAGTTGTACCGTTGGGTGGCGCCCGAGCAGTGGGGCAAGGTGAAGGTGGTGCATT < 2:339643/149‑1 CCTGAAGAATTCGACAAACCACAGTTCCTGCACTTGGGTGAGAAAGTACGGCGCGCCGCCTTTGTCGCGGCGGTGAGCTCGTACGGGCGCAGCCAGTTGTACCGTTGGGTGGCGCCCGAGCAGTGGGGCAAGGTGAAGGTGGTGCATTG < 6:15690/149‑1 CTTCAGGGCCGTGCACGGTAAAGCTGTATGCCGGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3554853‑3554817 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcccTGAAGAATTCGACAAACCACAGTTCCTGCACTTGGGTGAGAAAGTACGGCGCGCCGCCTTTGTCGCGGCGGTGAGCTCGTACGGGCGCAGCCAGTTGTACCGTTGGGTGGCGCCCGAGCAGTGGGGCAAGGTGAAGGTGGTGCATTG > NC_002947/3554849‑3554995 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |