New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 358708144 (0.710)4 (0.070) 4/258 NT 7.4% coding (1275/1329 nt) benK benzoate MFS transporter
?NC_002947 = 3587128 57 (0.950)coding (1322/1329 nt) benK benzoate MFS transporter

TACCGGCCTGGGCTGGGCCTCGGGCATCGGCCGTAATGGCGCCATCGTCGGCCCGCTGCTGGGCGGTGCGCTGATGGGCATCAACCTGCCACTGCAACTCAATTTCATCGCCTTTGCCATCCCTGGCGCCATCGCTGCGCTGGCCATGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3586931‑3587081
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccTGCGCCGCCAGGGTCTGGGCGTGGCGCCGACCACTGGCCAGGTGCACGGCCATGGCCA  <  NC_002947/3587128‑3587071
                                                                                                                                                                                                                 
TACCGGCCTGGGCTGGGCCTCGGGCATCGGCCGTAATGGCGCCATCGTCGGCCCGCTGCTGGGCGGTGCGCTGATGGGCATCAACCTGCCACTGCAACTCAATTTCATCGCCTTTGCCATCCCTGGCGCCATCGCTGCGCTGGCCATGG                                                              >  3:293536/1‑149
  CCGGCCTGGGCTGGGCCTCGGGCATCGGCCGTAATGGCGCCATCGTCGGCCCGCTGCTGGGCGGTGCGCTGATGGGCATCAACCTGCCACTGCAACTCAATTTCATCGCCTTTGCCATCCCTGGCGCCATCGCTGCGCTGGCCATGGCC                                                            >  2:135316/1‑149
  CCGGCCTGGGCTGGGCCTCGGGCATCGGCCGTAATGGCGCCATCGTCGGCCCGCTGCTGGGCGGTGCGCTGATGGGCATCAACCTGCCACTGCAACTCAATTTCATCGCCTTTGCCATCCCTGGCGCCATCGCTGCGCTGGCCATGGC                                                             <  2:256906/148‑1
  CCGGCCTGGGCTGGGCCTCGGGCATCGGCCGTAATGGCGCCATCGTCGGCCCGCTGCTGGGCGGTGCGCTGATGGGCATCAACCTGCCACTGCAACTCAATTTCATCGCCTTTGCCATCCCTGGCGCCATCGCTGCGCTGGCCATGG                                                              <  1:294582/147‑1
  CCGGCCTGGGCTGGGCCTCGGGCATCGGCCGTAATGGCGCCATCGTCGGCCCGCTGCTGGGCGGTGCGCTGATGGGCATCAACCTGCCACTGCAACTCAATTTCATCGCCTTTGCCATCCCTGGCGCCATCGCTGCGCTGGCCATGG                                                              <  5:237472/147‑1
                 CCTCGGGCATCGGCCGTAATGGCGCCATCGTCGGCCCGCTGCTGGGCGGTGCGCTGATGGGCATCAACCTGCCACTGCAACTCAATTTCATCGCCTTTGCCATCCCTGGCGCCATCGCTGCGCTGGCCATGGCCTGCGCCGCCAGGGTC                                             >  4:49488/1‑149
                                                  GCCCGCTGCTGGGCGGTGCGCTGATGGGCATCAACCTGCCACTGCAACTCAATTTCATCGCCTTTGCCATCCCTGGCGCCATCGCTGCGCTGGCCATGGCCTGCGCCGCCAGGGTCTGGGCGTGGCGCCGACCACTGGCCAGGTGCACG            >  3:316839/1‑149
                                                          CTGGGCGGTGCGCTGATGGGCATCAACCTGCCACTGCAACTCAATTTCATCGCCTTTGCCATCCCTGGCGCCATCGCTGCGCTGGCCATGGCCTGCGCCGCCAGGGTCTGGGCGTGGCGCCGACCACTGGCCAGGTGCACGGCCATGG     <  4:316839/148‑1
                                                             GGCGGTGCGCTGATGGGCATCAACCTGCCACTGCAACTCAATTTCATCGCCTTTGCCATCCCTGGCGCCATCGCTGCGCTGGCCATGGCCTGCGCCGCCAGGGTCTGGGCGTGGCGCCGACCACTGGCCAGGTGCACGGCCATGGCCA  <  3:49488/148‑1
                                                                                                                                                                                                                 
TACCGGCCTGGGCTGGGCCTCGGGCATCGGCCGTAATGGCGCCATCGTCGGCCCGCTGCTGGGCGGTGCGCTGATGGGCATCAACCTGCCACTGCAACTCAATTTCATCGCCTTTGCCATCCCTGGCGCCATCGCTGCGCTGGCCATGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3586931‑3587081
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccTGCGCCGCCAGGGTCTGGGCGTGGCGCCGACCACTGGCCAGGTGCACGGCCATGGCCA  <  NC_002947/3587128‑3587071

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.