New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 3587081 | 44 (0.710) | 4 (0.070) | 4/258 | NT | 7.4% | coding (1275/1329 nt) | benK | benzoate MFS transporter |
? | NC_002947 | = 3587128 | 57 (0.950) | coding (1322/1329 nt) | benK | benzoate MFS transporter |
GCGGTGCGCTGATGGGCATCAACCTGCCACTGCAACTCAATTTCATCGCCTTTGCCATCCCTGGCGCCATCGCTGCGCTGGCCATGGCCGTGCACCTGGCCAGTGGTCGGCGCCACGCCCAGACCCTGGCGGCGCAGGCCTGAACCGAACAGAACAAGACGAGGTAACCCCCATGACCGTGAACATTTCCCATACTGCCGAGGTACAGCAGTTCTTCGAGCAGGCCGCAGGCTTTTGTAATGCGGCCGGCAACCCACGCCTCAAACGCATCGTGCAGCGC > NC_002947/3586993‑3587272 | gCGGTGCGCTGATGGGCATCAACCTGCCACTGCAACTCAATTTCATCGCCTTTGCCATCCCTGGCGCCATCGCTGCGCTGGCCATGGCCGTGCACCTGGCCAGTGGTCGGCGCCACGCCCAGACCCTGGCGGCGCAGGCCTGAACCgaa < 4:293536/149‑1 (MQ=255) gCGGTGCGCTGATGGGCATCAACCTGCCACTGCAACTCAATTTCATCGCCTTTGCCATCCCTGGCGCCATCGCTGCGCTGGCCATGGCCGTGCACCTGGCCAGTGGTCGGCGCCACGCCCAGACCCTGGCGGCGCAGGCCTGAACCgaa > 6:240699/1‑149 (MQ=255) gcgcTGATGGGCATCAACCTGCCACTGCAACTCAATTTCATCGCCTTTGCCATCCCTGGCGCCATCGCTGCGCTGGCCATGGCCGTGCACCTGGCCAGTGGTCGGCGCCACGCCCAGACCCTGGCGGCGCAGGCCTGAACCgaacagaa > 1:283070/1‑149 (MQ=255) cgcTGATGGGCATCAACCTGCCACTGCAACTCAATTTCATCGCCTTTGCCATCCCTGGCGCCATCGCTGCGCTGGCCATGGCCGTGCACCTGGCCAGTGGTCGGCGCCACGCCCAGACCCTGGCGGCGCAGGCCTGAACCgaacagaa > 6:173806/1‑148 (MQ=255) cgcTGATGGGCATCAACCTGCCACTGCAACTCAATTTCATCGCCTTTGCCATCCCTGGCGCCATCGCTGCGCTGGCCATGGCCGTGCACCTGGCCAGTGGTCGGCGCCACGCCCAGACCCTGGCGGCGCAGGCCTGAACCgaacagaa < 3:194202/148‑1 (MQ=255) ggCATCAACCTGCCACTGCAACTCAATTTCATCGCCTTTGCCATCCCTGGCGCCATCGCTGCGCTGGCCATGGCCGTGCACCTGGCCAGTGGTCGGCGCCACGCCCAGACCCTGGCGGCGCAGGCCTGAACCGAACAGAACAAGACGAg > 4:50001/1‑149 (MQ=255) gCATCAACCTGCCACTGCAACTCAATTTCATCGCCTTTGCCATCCCTGGCGCCATCGCTGCGCTGGCCATGGCCGTGCACCTGGCCAGTGGTCGGCGCCACGCCCAGACCCTGGCGGCGCAGGCCTGAACCGAACAGAACAAGACGAgg > 1:384429/1‑149 (MQ=255) cATCAACCTGCCACTGCAACTCAATTTCATCGCCTTTGCCATCCCTGGCGCCATCGCTGCGCTGGCCATGGCCGTGCACCTGGCCAGTGGTCGGCGCCACGCCCAGACCCTGGCGGCGCAGGCCTGAACCGAACAGAACAAGACGAgg > 8:281164/1‑148 (MQ=255) aaCCTGCCACTGCAACTCAATTTCATCGCCTTTGCCATCCCTGGCGCCATCGCTGCGCTGGCCATGGCCGTGCACCTGGCCAGTGGTCGGCGCCACGCCCAGACCCTGGCGGCGCAGGCCTGAACCGAACAGAACAAGACGAGGTAAcc < 1:328194/149‑1 (MQ=255) ccTGCCACTGCAACTCAATTTCATCGCCTTTGCCATCCCTGGCGCCATCGCTGCGCTGGCCATGGCCGTGCACCTGGCCAGTGGTCGGCGCCACGCCCAGACCCTGGCGGCGCAGGCCTGAACCGAACAGAACAAGACGAGGTAAcccc > 3:51463/1‑149 (MQ=255) aCTGCAACTCAATTTCATCGCCTTTGCCATCCCTGGCGCCATCGCTGCGCTGGCCATGGCCGTGCACCTGGCCAGTGGTCGGCGCCACGCCCAGACCCTGGCGGCGCAGGCCTGAACCGAACAGAACAAGACGAGGTAACCCCCAAGAc > 7:229497/1‑149 (MQ=255) tGCAACTCAATTTCATCGCCTTTGCCATCCCTGGCGCCATCGCTGCGCTGGCCATGGCCGTGCACCTGGCCAGTGGTCGGCGCCACGCCCAGACCCTGGCGGCGCAGGCCTGAAcc > 8:31248/1‑116 (MQ=255) tGCAACTCAATTTCATCGCCTTTGCCATCCCTGGCGCCATCGCTGCGCTGGCCATGGCCGTGCACCTGGCCAGTGGTCGGCGCCACGCCCAGACCCTGGCGGCGCAGGCCTGAAcc < 7:31248/116‑1 (MQ=255) cAACTCTATTTCATCGCCTTTGCCATCCCTGGCGCCATCGCTGCGCTGGCCATGGCCGTGCACCTGGCCAGTGGTCGGCGCCACGCCCAGACCCTGGCGGCGCAGGCCTGAACCGAACAGAACAAGACGAGGTAACCCCCATGACCGt < 5:290233/148‑1 (MQ=255) cAACTCAATTTCATCGCCTTTGCCATCCCTGGCGCCATCGCTGCGCTGGCCATGGCCGTGCACCTGGCCAGTGGTCGGCGCCACGCCCAGACCCTGGCGGCGCAGGCCTGAACCGAACAGAACAAGACGAGGTAACCCCCATGACCGt < 7:199222/148‑1 (MQ=255) aaCTCAATTTCATCGCCTTTGCCATCCCTGGCGCCATCGCTGCGCTGGCCATGGCCGTGCACCTGGCCAGTGGTCGGCGCCACGCCCAGACCCTGGCGGCGCAGGCCTGAACCGAACAGAACAAGACGAGGTAACCCCCATGACCGTg > 5:367331/1‑148 (MQ=255) aaTTTCATCGCCTTTGCCATCCCTGGCGCCATCGCTGCGCTGGCCATGGCCGTGCACCTGGCCAGTGGTCGGCGCCACGCCCAGACCCTGGCGGCGCAGGCCTGAACCGAACAGAACAAGACGAGGTAACCCCCATGACCGTGAACagt > 4:116509/1‑147 (MQ=255) aaTTTCATCGCCTTTGCCATCCCTGGCGCCATCGCTGCGCTGGCCATGGCCGTGCACCTGGCCAGTGGTCGGCGCCACGCCCAGACCCTGGCGGCGCAGGCCTGAACCGAACAGAACAAGACGAGGTAACCCCCATGACCGTGAACAtt > 8:210896/1‑149 (MQ=255) tttCATCGCCTTTGCCATCCCTGGCGCCATCGCTGCGCTGGCCATGGCCGTGCACCTGGACAGTGGTCGGCGCCACGCCCAGACCCTGGCGGCGCAGGCCTGAACCGAACAGAACAAGACGAGGTAACCCCCATGACCGTGAACATTTc > 2:54476/1‑149 (MQ=255) tCGCCTTTGCCATCCCTGGCGCCATCGCTGCGCTGGCCATGGCCGTGCACCTGGCCAGTGGTCGGCGCCACGCCCAGACCCTGGCGGCGCAGGCCTGAACCGAACAGAACAAGACGCGGTACCCCCCATGACCGAGAACATTTCCCaaa > 3:210845/1‑147 (MQ=255) tCGCCTTTGCCATCCCTGGCGCCATCGCTGCGCTGGCCATGGCCGTGCACCTGGCCAGTGGTCGGCGCCACGCCCAGACCCTGGCGGCGCAGGCCTGAACCGAACAGAACAAGACGAGGTAACCCCCATGACCGTGAACATTTCCCAt > 1:382834/1‑148 (MQ=255) tCGCCTTTGCCATCCCTGGCGCCATCGCTGCGCTGGCCATGGCCGTGCACCTGGCCAGTGGTCGGCGCCACGCCCAGACCCTGGCGGCGCAGGCCTGAACCGAACAGAACAAGACGAGGTAACCCCCATGACCGTGAACATTTCCCATa < 5:107720/149‑1 (MQ=255) tCGCCTTTGCCATCCCTGGCGCCATCGCTGCGCTGGCCATGGCCGTGCACCTGGCCAGTGGTCGGCGCCACGCCCAGACCCTGGCGGCGCAGGCCTGAACCGAACAGAACAAGACGAGGTAACCCCCATGACCGTGAACATTTCCCATa > 1:98055/1‑149 (MQ=255) gctcccccATCCCTGGCGCCATCGCTGCGCTGGCCATGGCCGTGCACCTGGCCAGTGGTCGGCGCCACGCCCAGACCCTGGCGGCGCAGGCCTGAACCGAACAGAACAAGACGAGGTAACCCCCATGACCGTGAACATTTCCCATAc < 1:135316/141‑1 (MQ=255) ccATCCCTGGCGCCATCGCTGCGCTGGCCATGGCCGTGCACCTGGCCAGTGGTCGGCGCCACGCCCAGACCCTGGCGGCGCAGGCCTGAACCGAACAGAACAAGACGAGGTAACCCCCATGACCGTGAACATTTCCCATACTGCCGAg < 2:382834/148‑1 (MQ=255) cATCCCTGGCGCCATCGCTGCGCTGGCCATGGCCGTGCACCTGGCCAGTGGTCGGCGCCACGCACAGACCCTGGCGGCGCAGGCCTGACCCGAACAGAACACGACGAGGTAACCCCCATGACCGGGACCATTTCCCATACTGCCGCggg > 8:151124/1‑148 (MQ=255) tCCCTGGCGCCATCGCTGCGCTGGCCATGGCCGTGCACCTGGCCAGTGGTCGGCGCCACGCCCAGACCCTGGCGGCGCAGGCCTGAACCGAACAGAACAAGACGAGGTAACCCCCATGACCGTGAACATTTCCCATACTGCCGAGGTAc < 7:281164/149‑1 (MQ=255) ccTGGCGCCATCGCTGCGCTGGCCATGGCCGTGCACCTGGCCAGTGGTCGGCGCCACGCCCAGACCCTGGCGGCGCAGGCCTGAACCGAACAGAACAAGACGAGGTAACCCCCATGACCGTGAACATTTCCCATACTGCCGAGGTAcag > 2:299590/1‑149 (MQ=255) ccTGGCGCCATCGCTGCGCTGGCCATGGCCGTGCACCTGGCCAGTGGTCGGCGCCACGCCCAGACCCTGGCGGCGCAGGCCTGAACCGAACAGAACAAGACGAGGTAACCCCCATGACCGTGAACATTTCCCATACTGCCGAGGTAcag < 5:300784/149‑1 (MQ=255) cTGGCGCCATCGCTGCGCTGGCCATGGCCGTGCACCTGGCCAGTGGTCGGCGCCACGCCCAGACCCTGGCGGCGCAGGCCTGAACCGAACAGAACAAGACGAGGTAACCCCCATGACCGTGAACATTTCCCATACTGCCGAGGTAcagc < 7:151124/149‑1 (MQ=255) gcgcCATCGCTGCGCTGGCCATGGCCGTGCACCTGGCCAGTGGTCGGCGCCACGCCCAGACCCTGGCGGCGCAGGCCTGAACCGAACAGAACAAGACGAGGTAACCCCCATGACCGTGAACATTTCCCATACTGCCGAGGTACAGCAGt < 2:283070/149‑1 (MQ=255) tCGCTGCGCTGGCCATGGCCGTGCACCTGGCCAGTGGTCGGCGCCACGCCCAGACCCTGGCGGCGCAGGCCTGAACCGAACAGAACAAGACGAGGTAACCCCCATGACCGTGAACATTTCCCATACTGCCGAGGTACAGCAGTTCTTCg < 2:384429/149‑1 (MQ=255) tgGCCATGGCCGTGCACCTGGCCAGTGGTCGGCGCCACGCCCAGACCCTGGCGGCGCAggccatggccagcgcagcgatggcgccagggatggcaaaggcgatgaaattgagttgcagtggcaggttgatgcccatcagcgcaccgcc < 3:49488‑M2/148‑91 (MQ=255) gCCATGGCCGTGCACCTGGCCAGTGGTCGGCGCCACGCCCAGACCCTGGCGGCGCAGGCCTGAACCGAACAGAACAAGACGAGGTAACCCCCATGACCGTGAACATTTCCCATACTGCCGAGGTACAGCAGTTCTTCGAGCAGGCCGCa < 5:173806/149‑1 (MQ=255) ccATGGCCGTGCACCTGGCCAGTGGTCGGCGCCACGCCCAGACCCTGGCGGCGCAggccatggccagcgcagcgatggcgccagggatggcaaaggcgatgaaattgagttgcagtggcaggttgatgcccatcagcgcaccgcccag < 4:316839‑M2/148‑94 (MQ=255) gCCGTGCACCTGGCCAGTGGTCGGCGCCACGCCCAGACCCTGGCGGCGCAGGCCTGAACCGAACAGAACAAGACGAGGTACCCCCCATGACCGTGAACATTTCCCATACTGCCGAGGTACAGCAGTTCTTCGAGCAGGCCGCAGGCttt > 1:355928/1‑149 (MQ=255) gCCGTGCACCTGGCCAGTGGTCGGCGCCACGCCCAGACCCTGGCGGCGCAGGCCTGAACCGAACAGAACAAGACGAGGTAACCCCCATGACCGTGAACATTTCCCATACTGCCGAGGTACAGCAGTTCTTCGAGCAGGCCGCAGGCtt < 1:299590/148‑1 (MQ=255) ccGTGCACCTGGCCAGTGGTCGGCGCCACGCCCAGACCCTGGCGGCGCAGGCCTGAACCGAACAGAACAAGACGAGGTAACCCCCATGACCGTGAACATTTCCCATACTGCCGAGGTACAGCAGTTCTTCGAGCAGGCCGCAGGCtttt < 1:184606/149‑1 (MQ=255) ccGTGCACCTGGCCAGTGGTCGGCGCCACGCCCAGACCCTGGCGGCGCAGGCCTGAACCGAACAGAACAAGACGAGGTAACCCCCATGACCGTGAACATTTCCCATACTGCCGAGGTACAGCAGTTCTTCGAGCAGGCCGCAGGCtttt > 1:203414/1‑149 (MQ=255) cGTGCACCTGGCCAGTGGTCGGCGCCACGCCCAGACCCTGGCGGCGCAggccatggccagcgcagcgatggcgccagggatggcaaaggcgatgaaattgagttgcagtggcaggttgatgcccatcagcgcaccgcccagcagcgggc > 3:316839‑M2/1‑48 (MQ=255) cGTGCACCTGGCCAGTGGTCGGCGCCACGCCCAGACCCTGGCGGCGCAGGCCTGAACCGAACAGAACAAGACGAGGTAACCCCCATGACCGTGAACATTTCCCATACTGCCGAGGTACAGCAGTTCTTCGAGCAGGCCGCAGGCTTTTg < 1:54476/149‑1 (MQ=255) aCCTGGCCAGTGGTCGGCGCCACGCCCAGACCCTGGCGGCGCAGGCCTGAACCGAACAGAACAAGACGAGGTAACCCCCATGACCGTGAACATTTCCCATACTGCCGAGGTACAGCAGTTCTTCGAGCAGGCCGCAGGCTTTTGTAATg < 3:50001/149‑1 (MQ=255) aCCTGGCCAGTGGTCGCCGCCACGCCCAGACCCAGGCGGCGCAGGCCTGAACCGAAAAGAACAAGACGAGGTAACCCCCATGACCGTGAACAGTTCCCATACTGCCGAGCTACAGCAGTTCTTCGAGCAGGCCGCAGGCTTTTGTAATg > 6:182249/1‑149 (MQ=255) gCCAGTGGTCGGCGCCACGCCCAGACCCTGGCGGCGCAGGCCTGAACCGAACAGAACAAGACGAGGTAACCCCCATGACCGTGAACATTTCCCATACTGCCGAGGTACAGCAGTTCTTCGAGCAGGCCGCAGGCTTTTGTAATGcggc < 6:367331/148‑1 (MQ=255) tCGGCGCCACGCCCAGACCCTGGCGGCGCAGGCCTGAACCGAACAGAACAAGACGAGGTAACCCCCATGACCGTGAACATTTCCCATACTGCCGAGGTACAGCAGTTCTTCGAGCAGGCCGCAGGCTTTTGTAATGCGGCCGGCAAcc > 6:111479/1‑148 (MQ=255) tCGGCGCCACGCCCAGACCCTGGCGGCGCAGGCCTGAACCGAACAGAACAAGACGAGGTAACCCCCATGACCGTGAACATTTCCCATACTGCCGAGGTACAGCAGTTCTTCGAGCAGGCCGCAGGCTTTTGTAATGCGGCCGGCAAcc > 6:106121/1‑148 (MQ=255) cGGCGCCACGCCCAGACCCTGGCGGCGCAGGCCTGAACCGAACAGAACAAGACGAGGTAACCCCCATGACCGTGAACATTTCCCATACTGCCGAGGTACAGCAGTTCTTCGAGCAGGCCGCAGGCTTTTGTAATGCGGCCGGCAACCCa < 2:355928/149‑1 (MQ=255) ggCGCCACGCCCAGACCCTGGCGGCGCAGGCCTGAACCGAACAGAACAAGACGAGGTAACCCCCATGACCGTGAACATTTCCCATACTGCCGAGGTACAGCAGTTCTTCGAGCAGGCCGCAGGCTTTTGTAATGCGGCCGGCAACCCAc > 8:121501/1‑149 (MQ=255) cgcCACGCCCAGACCCTGGCGGCGCAGGCCTGAACCGAACAGAACAAGACGAGGTAACCCCCATGACCGTGAACATTTCCCATACTGCCGAGGTACAGCAGTTCTTCGAGCAGGCCGCAGGCTTTTGTAATGCGGCCGGCAACCCACGc < 5:240699/149‑1 (MQ=255) cgcCACGCCCAGACCCTGGCGGCGCAGGCCTGAACCGAACAGAACAAGACGAGGTAACCCCCATGACCGTGAACATTTCCCATACTGCCGAGGTACAGCAGTTCTTCGAGCAGGCCGCAGGCTTTTGTAATGCGGCCGGCAACCCACGc < 8:111590/149‑1 (MQ=255) cACGCACAGACCCTGGCGGCGCAGGCCTGAACCGAACAGAACAAGACGAGGTAACCCCCATGACCGTGAACATTTCCCATACTGCCGAGGTACAGCAGTTCTTCGAGCAGGCCGCAGGCTTTAGTAATGCGGCCGGCAACCCACGCCt > 5:11991/1‑148 (MQ=255) aCGCCCAGACCCTGGCGGCGCAGGCCTGAACCGAACAGAACAAGACGAGGTAACCCCCATGACCGTGAACATTTCCCATACTGCCGAGGTACAGCAGTTCTTCGAGCAGGCCGCAGGCTTTTGTAATGCGGCCGGCAACCCACGCCTc > 5:304417/1‑148 (MQ=255) ccAGACCCTGGCGGCGCAGGCCTGAACCGAACAGAACAAGACGAGGTAACCCCCATGACCGTGAACATTTCCCATACTGCCGAGGTACAGCAGttcttc < 7:142834/99‑1 (MQ=255) ccAGACCCTGGCGGCGCAGGCCTGAACCGAACAGAACAAGACGAGGTAACCCCCATGACCGTGAACATTTCCCATACTGCCGAGGTACAGCAGttcttc > 8:142834/1‑99 (MQ=255) cAGACCCTGGCGGCGCAGGCCTGAACCGAACAGAACAAGACGAGGTAACCCCCATGACCGTGAACAGTTCCCATACTGCCGAGGTACAGCAGTTCTTCGAGCAGGCCGCAGGCTTTTGTAATGCGGCCGGCAACCCACGCCTCAAACg > 3:211562/1‑148 (MQ=255) aGACCCTGGCGGCGCAGGCCTGAACCGAACAGAACAAGACGAGGTAACCCCCATGACCGTGAACATTTCCCATACTGCCGAGGTACAGCAGTTCTTCGAGCAGGCCGCAGGCTTTTGTAATGCGGCCGGCAACCCACGCCTCAAACGCa < 6:304417/149‑1 (MQ=255) gACCCTGGCGGCGCAggccatggccagcgcagcgatggcgccagggatggcaaaggcgatgaaattgagttgcagtggcaggttgatgcccatcagcgcaccgcccagcagcgggccgacgatggcgccattacggccgatgcccgagg > 4:49488‑M2/1‑15 (MQ=255) ccTGGCGGCGCAGGCCTGAACCGAACAGAACAAGACGAGGTAACCCCCATGACCGTGAACATTTCCCATACTGCCGAGGTACAGCAGTTCTTCGAGCAGGCCGCAGGCTTTTGTAATGCGGCCGGCAACCCACGCCTCAAACGCATCGt > 6:142505/1‑149 (MQ=255) cTGGCGGCGCAGGCCTGAACCGAACAGAACAAGACGAGGTAACCCCCATGACCGTGAACATTTCCCATACTGCCGAGGTACAGCAGTTCTTCGAGCAGGCCGCAGGCTTTTGTAATGCGGCCGGCAACCCACGCCTCAAACGCATCGTg > 8:17651/1‑149 (MQ=255) cTGGCGGCGCAGGCCTGAACCGAACAGAACAAGACGAGGTAACCCCCATGACCGTGAACATTTCCCATACTGCCGAGGTACAGCAGTTCTTCGAGCAGGCCGCAGGCTTTTGTAATGCGGCCGGCAACCCACGCCTCAAACGCATCGTg > 6:111551/1‑149 (MQ=255) cggcgCAGGCCTGAACCGAACAGAACAAGACGAGGTAACCCCCATGACCGTGAACATTTCCCATACTGCCGAGGTACAGCAGTTCTTCGAGCAGGCCGCAGGCTTTTGTAATGCGGCCGGCAACCCACGCCTCAAACGCATCGTGCGgc < 7:121501/149‑1 (MQ=255) gcgcAGGCCTGAACCGAACAGAACAAGACGAGGTAACCCCCATGACCGTGAACATTTCCCATACTGCCGAGGTACAGCAGTTCTTCGAGCAGGCCGCAGGCTTTTGTAATGCGGCCGGCAACCCACGCCTCAAACGCATCGTGCAgcgc < 4:51463/149‑1 (MQ=255) | GCGGTGCGCTGATGGGCATCAACCTGCCACTGCAACTCAATTTCATCGCCTTTGCCATCCCTGGCGCCATCGCTGCGCTGGCCATGGCCGTGCACCTGGCCAGTGGTCGGCGCCACGCCCAGACCCTGGCGGCGCAGGCCTGAACCGAACAGAACAAGACGAGGTAACCCCCATGACCGTGAACATTTCCCATACTGCCGAGGTACAGCAGTTCTTCGAGCAGGCCGCAGGCTTTTGTAATGCGGCCGGCAACCCACGCCTCAAACGCATCGTGCAGCGC > NC_002947/3586993‑3587272 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |