New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 408737242 (0.680)4 (0.070) 4/244 NT 8.8% intergenic (+21/‑405) PP_3597/PP_3598 amino acid ABC transporter ATP‑binding protein/peptidase C26
?NC_002947 = 4087442 44 (0.770)intergenic (+91/‑335) PP_3597/PP_3598 amino acid ABC transporter ATP‑binding protein/peptidase C26

GGCTTTGCCCGGCAGGTCGCCGAGCGGGTGCTGTTCCTTGAGGGTGGGCAGATCATCGAGGACAGCCCGCCGCAGGTGTTCTTCAACCAGCCGCGCACCGAGCGGGCCAAGGCGTTTTTGGCGCAGATCCTGCACTGATTGAAAGCCTGTCACTGTGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4087214‑4087372
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtcactgtgggAGTGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACGGCGGTGTCTTCTTCGCGGGTAAACCCCCCACAGTGACAGGCTTTCAATCAGTGCAGGATCTGCGCCAAAAACGCCTTGGCCCGCTCGGTGCGCGGCTGGTTGAA  <  NC_002947/4087442‑4087295
                                                                                                                                                                                                                                                                                                                   
GGCTTTGCCCGGCAGGTCGCCGAGCGGGTGCTGTTCCTTGAGGGTGGGCAGATCATCGAGGACAGCCCGCCGCAGGTGTTCTTCAACCAGCCGCGCACCGAGCGGGCCAAGGCGTTTTTGGCGCAGATCCTGCACTGATTGAAAGCCTG                                                                                                                                                                <  5:238856/149‑1
      GCCCGGCAGGTCGCCGAGCGGGTGCTGTTCCTTGAGGGTGGGCAGATCATCGAGGACAGCCCGCCGCAGGTGTTCTTCAACCAGCCGCGCACCGAGCGGGCCAAGGCGTTTTTGGCGCAGATCCTGCACTGATTGAAAGCCTGTCACTG                                                                                                                                                          >  1:82186/1‑149
        CCGGCAGGTCGCCGAGCGGGTGCTGTTCCTTGAGGGTGGGCAGATCATCGAGGACAGCCCGCCGCAGGTGTTCTTCAACCAGCCGCGCACCGAGCGGGCCAAGGCGTTTTTGGCGCAGATCCTGCACTGATTGAAAGCCTGTCACTGTG                                                                                                                                                        >  7:319198/1‑149
                                                             ACAGCCCGCCGCAGGTGTTCTTCAACCAGCCGCGCACCGAGCGGGCCAAGGCGTTTTTGGCGCAGATCCTGCACTGATTGAAAGCCTGTCACTGTGGGAGTGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACGGCGGTGT                                                                                                   >  1:200700/1‑149
                                                                        CAGGTGTTCTTCAACCAGCCGCGCACCGAGCGGGCCAAGGCGTTTTTGGCGCAGATCCTGCACTGATTGAAAGCCTGTCACTGTGGGAGTGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACGGCGGTGTCTTCTTCGCGG                                                                                        >  5:58577/1‑149
                                                                                        AGCCGCGCACCGAGCGGGCCAAGGCGTTTTTGGCGCAGATCCTGCACTGATTGAAAGCCTGTCACTGTGGGAGTGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACGGCGGTGTCTTCTTCGCGGGTAAACCCCCCACAGT                                                                        <  2:200700/149‑1
                                                                                                   GAGCGGGCCAAGGCGTTTTTGGCGCAGATCCTGCACTGATTGAAAGCCTGTCACTGTGGGAGTGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACGGCGGTGTCTTCTTCGCGGGTAAACCCCCCACAGTGACAGGCTTTC                                                             <  6:58577/149‑1
                                                                                                                                                      CACTGTGGGAGTGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACGGCGGTGTCTTCTTCGCGGGTAAACCCCCCACAGTGACAGGCTTTCAATCAGTGCAGGATCTGCGCCAAAAACGCCTTGGCCCGCTCGGTGCGCGGC          >  2:148669/1‑149
                                                                                                                                                           TGGGAGTGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACGGCGGTGTCTTCTTCGCGGGTAAACCCCCCACAGTGACAGGCTTTCAATCAGTGCAGGATCTGCGCCAAAAACGCCTTGGCCCGCTCGGTGCGCGGCTGG       <  2:256016/147‑1
                                                                                                                                                              GAGTGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACGGCGGTGTCTTCTTCGCGGGTAAACCCCCCACAGTGACAGGCTTTCAATCAGTGCAGGATCTGCGCCAAAAACGCCTTGGCCCGCTCGGTGCGCGGCTGGTTGAA  <  6:148314/149‑1
                                                                                                                                                                                                                                                                                                                   
GGCTTTGCCCGGCAGGTCGCCGAGCGGGTGCTGTTCCTTGAGGGTGGGCAGATCATCGAGGACAGCCCGCCGCAGGTGTTCTTCAACCAGCCGCGCACCGAGCGGGCCAAGGCGTTTTTGGCGCAGATCCTGCACTGATTGAAAGCCTGTCACTGTGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4087214‑4087372
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtcactgtgggAGTGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACGGCGGTGTCTTCTTCGCGGGTAAACCCCCCACAGTGACAGGCTTTCAATCAGTGCAGGATCTGCGCCAAAAACGCCTTGGCCCGCTCGGTGCGCGGCTGGTTGAA  <  NC_002947/4087442‑4087295

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.