New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 4087372 | 42 (0.680) | 4 (0.070) | 4/244 | NT | 8.8% | intergenic (+21/‑405) | PP_3597/PP_3598 | amino acid ABC transporter ATP‑binding protein/peptidase C26 |
? | NC_002947 | = 4087442 | 44 (0.770) | intergenic (+91/‑335) | PP_3597/PP_3598 | amino acid ABC transporter ATP‑binding protein/peptidase C26 |
GCAGGTCGCCGAGCGGGTGCTGTTCCTTGAGGGTGGGCAGATCATCGAGGACAGCCCGCCGCAGGTGTTCTTCAACCAGCCGCGCACCGAGCGGGCCAAGGCGTTTTTGGCGCAGATCCTGCACTGATTGAAAGCCTGTCACTGTGGGGGGTTTACCCGCGAAGAAGACACCGCCGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCAAGCCCACTCCCACAGTGACCGAGGTTACTTCAAGTTACCTAATCATTGCGCCGCTGCAATGACCCAACTGCATCGTTAAATATTAT > NC_002947/4087225‑4087520 | gCAGGGCGCCGAGCGGGGGCGGTTCCTTCTGGGTGGCCATATCATCGAGGACAGCCCGCCGCAGGTGTTCTTCAACCAGCCGCGCACCGAGCGGGCCAAGGCGTTTTTGGCGCAGATCCTGCACTGATTGAAAGCCTGTCACTGTgggg < 1:130473/149‑1 (MQ=255) gTCGCCGAGCGGGTGCTGTTCCTTGAGGGTGGGCAGATCATCGAGGACAGCCCGCCGCAGGTGTTCTTCAACCAGCCGCGCACCGAGCGGGCCAAGGCGTTTTTGGCGCAGATCCTGCACTGATTGAAAGCCTGTCACTGTggggg > 6:90052/1‑146 (MQ=255) gTCGCCGAGCGGGTGCTGTTCCTTGAGGGTGGGCAGATCATCGAGGACAGCCCGCCGCAGGTGTTCTTCAACCAGCCGCGCACCGAGCGGGCCAAGGCGTTTTTGGCGCAGATCCTGCACTGATTGAAAGCCTGTCACTGTggggg < 5:90052/146‑1 (MQ=255) aGCGGGTGCTGTTCCTTGAGGGTGGGCAGATCATCGAGGACAGCCCGCCGCAGGTGTTCTTCAACCAGCCGCGCACCGAGCGGGCCAAGGCGTTTTTGGCGCAGATCCTGCACTGATTGAAAGCCTGTCACTGTGGGGGGTTTAccctc < 2:82186/149‑3 (MQ=255) gggTGCTGTTCCTTGAGGGTGGGCAGATCATCGAGGACAGCCCGCCGCAGGTGTTCTTCAACCAGCCGCGCACCGAGCGGGCCAAGGCGTTTTTGGCGCAGATCCTGCACTGATTGAAAGCCTGTCACTGTGGGGGGTTTACCCGCgaa < 7:146868/149‑1 (MQ=255) tGCTGTTCCTTGAGGGTGGGCAGATCATCGAGGACAGCCCGCCGCAGGTGTTCTTCAACCAGCCGCGCACCGAGCGGGCCAAGGCGTTTTTGGCGCAGATCCTGCACTGATTGAAAGCCTGTCACTGTGGGGGGTTTACCCGCgaagaa < 6:52515/149‑1 (MQ=255) tGCTGTTCCTTGAGGGTGGGCAGATCATCGAGGACAGCCCGCCGCAGGTGTTCTTCAACCAGCCGCGCACCGAGCGGGCCAAGGCGTTTTTGGCGCAGATCCTGCACTGATTGAAAGCCTGTCACTGTGGGGGGTTTACCCGCgaagaa < 6:373899/149‑1 (MQ=255) ttCCTTGAGGGTGGGCAGATCATCGAGGACAGCCCGCCGCAGGTGTTCTTCAACCAGCCGCGCACCGAGCGGGCCAAGGCGTTTTTGGCGCAGATCCTGCACTGATTGAAAGCCTGTCACTGTGGGGGGTTTAccc < 6:235382/136‑1 (MQ=255) ttCCTTGAGGGTGGGCAGATCATCGAGGACAGCCCGCCGCAGGTGTTCTTCAACCAGCCGCGCACCGAGCGGGCCAAGGCGTTTTTGGCGCAGATCCTGCACTGATTGAAAGCCTGTCACTGTGGGGGGTTTAccc > 5:235382/1‑136 (MQ=255) ttGAGGGTGGGCAGATCATCGAGGACAGCCCGCCGCAGGTGTTCTTCAACCAGCCGCGCACCGAGCGGGCCAAGGCGTTTTTGGCGCAGATCCTGCACTGATTGAAAGCCTGTCACTGTGGGGGGTTTACCCGCGAAGAAGACAccgcc > 7:221250/1‑149 (MQ=255) gAGGGTGGGCAGATCATCGAGGACAGCCCGCCGCAGGTGTTCTTCAACCAGCCGCGCACCGAGCGGGCCAAGGCGTTTTTGGCGCAGATCCTGCACTGATTGAAAGCCTGTCACTGTGGGGGGTTTACCCGCGAAGAAGACACCGCCGt > 6:113254/1‑149 (MQ=255) ggCAGATCATCGAGGACAGCCCGCCGCAGGTGTTCTTCAACCAGCCGCGCACCGAGCGGGCCAAGGCGTTTTTGGCGCAGATCCTGCACTGATTGAAAGCCTGTCACTGTGGGGGG‑TTACCcgc < 6:168793/124‑1 (MQ=255) gATCATCGAGGACAGCCCGCCGCAGGTGTTCTTCAACCAGCCGCGCACCGAGCGGGCCAAGGCGTTTTTGGCGCAGATCCTGCACTGATTGAAAGCCTGTCACTGTGGGGGGTTTACCCGCGAAGAAGACACCGCCGTGGATGGCACgg > 6:19285/1‑149 (MQ=255) gAGGACAGCCCGCCGCAGGTGTTCTTCAACCAGCCGCGCACCGAGCGGGCCAAGGCGTTTTTGGCGCAGATCCTGCACTGATTGAAAGCCTGGCACTGTGGGGGGTTTACCCGCGAAGAAGACACCGCCGTGGATGGCACGGGCTTCGc < 6:202734/149‑1 (MQ=255) gAGGACAGCCCGCCGCAGGTGTTCTTCAACCACCCGCGCACCGAGCGGGCCAAGGCGTTTTTGGCGCAGATCCTGCACTGATTGAAAGCCTGTCACTGTGGGGGGTTTACCCGCGAAGAAGACACCGCCGTGGATGGCACGGGCTTCGc < 5:113254/149‑1 (MQ=255) ggACAGCCCGCCGCAGGTGTTCTTCAACCAGCCGCGCACCGAGCGGGCCAAGGCGTTTTTGGCGCAGATCCTGCACTGATTGAAAGCCTGTCACTGTGGGGGGTTTACCCGCGAAGAAGACACCGCCGTGGATGGCACGGGCTTCGccc < 5:157252/149‑1 (MQ=255) aCAGCCCGCCGCAGGTGTTCTTCAACCAGCCGCGCACCGAGCGGGCCAAGGCGTTTTTGGCGCAGATCCTGCACTGATTGAAAGCCTGTCACTGTGGGagtgggcttgcccgcgaacacgggcgaagcccgtgccatccacggcggtgt > 1:200700‑M1/1‑98 (MQ=255) gccgcAGGTGTTCTTCTACCAGCCGCGCACCGAGCGGGCCATGGCGTTTTTGGCGCAGATCCTGCACTGATTGAAAGCCTTTCACTGTGGGGTGTTTACCCGCGAAGAAGACACCGCCGTGGATGGCACGGGCTTCGCCCGTGTTcgcg < 5:329252/149‑1 (MQ=255) gccgcAGGTGTTCTTCAACCAGCCGCGCACCGAGCGGGCCAAGGCGTTTTTGGCGCAGATCCTGCACTGATTGAAAGCCTGTCACTGTGGGGGGTTTACCCGCGAAGAAGACACCGCCGTGGATGGCACGGGCTTCGCCCGTGTTcgcg > 6:234897/1‑149 (MQ=255) cAGGTGTTCTTCAACCAGCCGCGCACCGAGCGGGCCAAGGCGTTTTTGGCGCAGATCCTGCACTGATTGAAAGCCTGTCACTGTGGGagtgggcttgcccgcgaacacgggcgaagcccgtgccatccacggcggtgtcttcttcgcgg > 5:58577‑M1/1‑87 (MQ=255) gtgtTCTTCAACCAGCCGCGCACCGAGCGGGCCAAGGCGTTTTTGGCGCAGATCCTGCACTGATTGAAAGCCTGTCACTGTGGGGGGTTTACCCGCGAAGAAGACACCGCCGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCAAGc < 5:19285/149‑1 (MQ=255) ttcAACCAGCCGCGCACCGAGCGGGCCAAGGCGTTTTTGGCGCAGATCCTGCACTGATTGAAAGCCTGTCACTGTGGGGGGTTTACCCGCGAAGAAGCCACCGCCGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCAAGcccccgc > 3:225063/1‑145 (MQ=255) ttCAACCAGCCGCGCACCGAGCGGGCCAAGGCGTTTTTGGCGCAGATCCTGCACTGATTGAAAGCCTGTCACTGTGGGGGGTTTACCCGCGAAGAAGACACCGCCGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCAAGCCCACTc < 6:148314‑M2/149‑2 (MQ=255) ccAGCCGCGCACCGAGCGGGCCAAGGCGTTTTTGGCGCAGATCCTGCACTGATTGAAAGCCTGTCACTGTGGGGGGTTTACCCGCGAAGAAGACACCGCCGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCAAGCCCACTccca < 2:256016‑M2/147‑5 (MQ=255) aGCCGCGCACCGAGCGGGCCAAGGCGTTTTTGGCGCAGATCCTGCACTGATTGAAAGCCTGTCACTGTGGGagtgggcttgcccgcgaacacgggcgaagcccgtgccatccacggcggtgtcttcttcgcgggtaaaccccccacagt < 2:200700‑M1/149‑79 (MQ=255) aGCCGCGCACCGAGCGGGCCAAGGCGTTTTTGGCGCAGATCCTGCACTGATTGAAAGCCTGTCACTGTGGGGGGTTTACCCGCGAAGAAGACACCGCCGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCAAGCCCAc > 4:314011/1‑140 (MQ=255) aGCCGCGCACCGAGCGGGCCAAGGCGTTTTTGGCGCAGATCCTGCACTGATTGAAAGCCTGTCACTGTGGGGGGTTTACCCGCGAAGAAGACACCGCCGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCAAGCCCAc < 3:314011/140‑1 (MQ=255) gCCGCGCACCGAGCGGGCCAAGGCGTTTTTGGCGCAGATCCTGCACTGATTGAAAGCCTGTCACTGTGGGGGGTTTACCCGCGAAGAAGACACCGCCGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCAAGCCCACTcccacagtg > 2:148669‑M2/1‑140 (MQ=255) gAGCGGGCCAAGGCGTTTTTGGCGCAGATCCTGCACTGATTGAAAGCCTGTCACTGTGGGagtgggcttgcccgcgaacacgggcgaagcccgtgccatccacggcggtgtcttcttcgcgggtaaaccccccacagtgacaggctttc < 6:58577‑M1/149‑90 (MQ=255) aGCGGGCCAAGGCGTTTTTGGCGCAGATCCTGCACTGATTGAAAGCCTGTCACTGTGGGGGGTTTACCCGCGAAGAAGACACCGCCGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCAAGCCCACTCCCACAGTGACCGAGGTTa > 4:115295/1‑148 (MQ=255) aGCGGGCCAAGGCGTTTTTGGCGCAGATCCTGCACTGATTGAAAGCCTGTCACTGTGGGGGGTTTACCCGCGAAGAAGACACCGCCGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCAAGCCCACTCCCACAGTGACCGAGGTTa < 3:115295/148‑1 (MQ=255) gggCCAAGGCGTTTTTGGCGCAGATCCTGCACTGATTGAAAGCCTGTCACTGTGGGGGGTTTACCCGCGAAGAAGACACCGCCGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCAAGCCCACTCCCACAGTGACCGAGGTTACTTc < 8:319198/149‑1 (MQ=255) gggCCAAGGCGTTTTTGGCGCAGATCCTGCACTGATTGAAAGCCTGTCACTGTGGGGGGTTTACCCGCGAAGAAGACACCGCCGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCAAGCCCACTCCCACAGTGACCGAGGTTACTTc < 8:221250/149‑1 (MQ=255) cccAAGGCGATTTTGGCGCAGATCCTGCACTGATTGAAAGCCTGTCACTGTGGGGGGTTTACCCGCGAAGAAGACACCGCCGTGGATAGCACCGGCTTCGCCCGTGTTAGCGGGCAAGCCCACACCCACAGATACAGAGGTTACATCaa > 6:233234/2‑149 (MQ=25) ccAAGGCGTTTTTGGCGCAGATCCTGCACTGATTGAAAGCCTGTCACTGTGGGGGGTTTACCCGCGAAGAAGACACCGCCGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCAAGCCCACTCCCACAGTGACCGAGGt < 2:333154/140‑1 (MQ=255) ccAAGGCGTTTTTGGCGCAGATCCTGCACTGATTGAAAGCCTGTCACTGTGGGGGGTTTACCCGCGAAGAAGACACCGCCGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCAAGCCCACTCCCACAGTGACCGAGGTTagatgggg > 1:333154/1‑142 (MQ=255) ccAAGGCGTTTTTGGCGCAGATCCTGCACTGATTGAAAGCCTGTCACTGTGGGGGGTTTACCCGCGAAGAAGACACCGCCGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCAAGCCCACTCCCACAGTGACCGAGGTTACTTCAAg < 2:244453/149‑1 (MQ=255) aGGCGTTTTTGGCGCAGATCCTGCACTGATTGAAAGCCTGTCACTGTGGGGGGTTTACCCGCGAAGAAGACACCGCCGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCAAGCCCACTCCCACAGTGACCGAGGTTACTTCAAGTTa > 4:63036/1‑149 (MQ=255) ggCGTTTTTGGCGCAGATCCTGCACTGATTGAAAGCCTGTCACTGTGGGGGGTTTACCCGCGAAGAAGACACCGCCGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCAAGCCCACTCCCACAGTGACCGAGGTTACTTCAGGTTAc < 5:234897/149‑1 (MQ=255) gCGTTTTTGGCGCAGATCCTGCACTGATTGAAAGCCTGTCACTGTGGGGGGTTTACCCGCGAAGAAGACACCGCCGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCAAGCCCACTCCCACAGTGACCGAGGTTACTTCAAGTTAcc > 2:239301/1‑149 (MQ=255) gTTTTTGGCGCAGATCCTGCACTGATTGAAAGCCTGTCACTGT‑GGGGGTTTACCCGCGAAGAAGACACCGCCGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCAAGCCCACTCCCACAGTGACCGAGGTTACTTCAAGTTACCTaa > 4:355386/1‑149 (MQ=255) gcgcAGATCCTGCACTGATTGAAAGCCTGTCACTGTGGGGGGTTTACCCGCGAAGAAGACACCGCCGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCAAGCCCACTCCCACAGTGACCGAGGTTACTTCAAGTTACCTAATCAtt < 4:21887/148‑1 (MQ=255) gcgcAGATCCTGCACTGATTGAAAGCCTGTCACTGTGGGGGGTTTACCCGCGAAGAAGACACCGCCGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCAAGCCCACTCCCACAGTGACCGAGGTTACTTCAAGTTACCTAATCAtt < 1:239301/148‑1 (MQ=255) cgcAGATCCTGCACTGATTGAAAGCCTGTCACTGTGGGGGGTTTACCCGCGAAGAAGACACCGCCGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCAAGCCCACTCCCACAGTGACCGAGGTTACTTCAAGTTACCTAATCATTgc < 5:148314/149‑1 (MQ=255) gcAGATCCTGCACTGATTGAAAGCCTGTCACTGTGGGGGGTTTACCCGCGAAGAAGACACCGCCGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCAAGCCCACTCCCACAGTGACCGAGGTTACTTCAAGTTACCTAATCATTgcg > 3:313686/1‑149 (MQ=255) cTGATGGAAAGCCTGTCCCTGTGGGTGGTTTACCCGCGAAGAAGCCACCGCCGTGGATGGCACGGGCGTCGCCCGTGTTCGCGGGCAAGCCCACTCCCACAGTGACCGAGGTTACTTCAAGTTACCTAATCATTGCGCCGCTGCAATGa < 4:225063/149‑1 (MQ=37) aTTGAAAGCCTGTCACTGTGGGGGGTTTACCCGCGAAGAAGACACCGCCGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCAAGCCCACTCCCACAGTGACCGAGGTTACTTCAAGTTACCTAATCATTGCGCCGCTGCAATGAcc > 6:19807/1‑148 (MQ=255) ttGAAAGCCTGTCACTGTGGGGGGTTTACCCGCGAAGAAGACACCGCCGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCAAGCCCACTCCCACAGTGACCGAGGTTACTTCAAGTTACCTAATCATTGCGCCGCTGCAATGAccc > 6:330644/1‑148 (MQ=255) gAAAGCCTGTCACTGTGGGGGGTTTACCCGCGAAGAAGACACCGCCGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCAAGCCCACTcccacagtgacaggctttcaatcagtgcaggatctgcgccaaaaacgccttggcccgctc < 6:58577‑M2/149‑61 (MQ=255) aaaGCCTGTCACTGTGGGGGGTTTACCCGCGAAGAAGACACCGCCGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCAAGCCCACTCCCACAGTGACCGAGGTTACTTCAAGTTACCTAATCATTGCGCCGCTGCAATGAcc > 7:204773/1‑144 (MQ=255) aaaGCCTGTCACTGTGGGGGGTTTACCCGCGAAGAAGACACCGCCGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCAAGCCCACTCCCACAGTGACCGAGGTTACTTCAAGTTACCTAATCATTGCGCCGCTGCAATGAcc < 8:204773/144‑1 (MQ=255) aaaGCCTGTCACTGT‑GGGGGTTTACCCGCGAAGAAGACACCGCCGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCAAGCCCACTCCCACAGTGACCGAGGTTACTTCAAGTTACCTAATCATTGCGCCGCTGCAATGACCCAACt < 3:355386/148‑1 (MQ=255) tGTCACTGTGGGGGGTTTACCCGCGAAGAAGACACCGCCGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCAAGCCCACTCCCACAGTGACCGAGGTTACTTCAAGTTACCTAATCATTGCGCCGCTGCAATGACCCAACTGCATCg > 7:83390/1‑149 (MQ=255) cACTGTGGGagtgggcttgcccgcgaacacgggcgaagcccgtgccatccacggcggtgtcttcttcgcgggtaaaccccccacagtgacaggctttcaatcagtgcaggatctgcgccaaaaacgccttggcccgctcggtgcgcggc > 2:148669‑M1/1‑9 (MQ=255) aCTGTGGGGGGTTTACCCGCGAAGAAGACACCGCCGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCAAGCCCACTcccacagtgacaggctttcaatcagtgcaggatctgcgccaaaaacgccttggcccgctcggtgcgcggct < 2:200700‑M2/149‑72 (MQ=255) tgGGagtgggcttgcccgcgaacacgggcgaagcccgtgccatccacggcggtgtcttcttcgcgggtaaaccccccacagtgacaggctttcaatcagtgcaggatctgcgccaaaaacgccttggcccgctcggtgcgcggctgg < 2:256016‑M1/147‑144 (MQ=255) tgGGGGGTTTACCCGCGAAGAAGACTCGTCCGTGGATGGCACGGGCTTCGTCCTTGTTCGCGTGCAAGCCCACTCCCACAGTGACCTAGGTTACTTCAAGTTACCTAATCATTGCGCCGCTACAATGACCCAACTGCATCGTTAAat < 5:233234/147‑1 (MQ=37) ggggTTTACCCGCGAAGAAGACACCGCCGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCAAGCCCACTCCCACAGTGACCGAGGTTACTTCAAGTTACCTAATCATTGCGCCGCTGCAATGACCCAACTGCATCGTTAAAtattat < 3:63036/149‑1 (MQ=255) gagtgggcttgcccgcgaacacgggcgaagcccgtgccatccacggcggtgtcttcttcgcgggtaaaccccccacagtgacaggctttcaatcagtgcaggatctgcgccaaaaacgccttggcccgctcggtgcgcggctggttgaa < 6:148314‑M1/149‑149 (MQ=255) | GCAGGTCGCCGAGCGGGTGCTGTTCCTTGAGGGTGGGCAGATCATCGAGGACAGCCCGCCGCAGGTGTTCTTCAACCAGCCGCGCACCGAGCGGGCCAAGGCGTTTTTGGCGCAGATCCTGCACTGATTGAAAGCCTGTCACTGTGGGGGGTTTACCCGCGAAGAAGACACCGCCGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCAAGCCCACTCCCACAGTGACCGAGGTTACTTCAAGTTACCTAATCATTGCGCCGCTGCAATGACCCAACTGCATCGTTAAATATTAT > NC_002947/4087225‑4087520 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |