| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 4403435 | 45 (0.730) | 7 (0.120) | 7/252 | NT | 13.9% | coding (146/468 nt) | PP_3882 | terminase small subunit |
| ? | NC_002947 | = 4403466 | 44 (0.750) | coding (115/468 nt) | PP_3882 | terminase small subunit | |||||
GGGTGCTGGTGGTTTCGTATGTGCGCCCCTGTTCGCCAATCACGTCACGAAGGGCAAGGATTTCGGAATAGCAGTCGCACAGGCGCTCAAGCGCGAAGCCATCTGCCTCGGTAAGCACACCCATGCGGTCAAGCAGCACCGTGAGC‑‑‑‑‑‑‑‑CGCCCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4403283‑4403435‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcccccGACCACTTGAGCTCAGATGGCCAGGTGGCGTGGGGGCGGCTCACGGTGCTGCTTGACCGCATGGGTGTGCTTACCGAGGCAGATGGCTTCGCGCTTGAGCGCCTGTGCGACTGCTATTCCGAAATCCTTGCCCTTCGTGACGTGATT < NC_002947/4403466‑4403320 GGGTGCTGGTGGTTTCGTATGTGCGCCCCTGTTCGCCAATCACGTCACGAAGGGCAAGGATTTCGGAATAGCAGTCGCACAGGCGCTCAAGCGCGAAGCCATCTGCCTCGGTAAGCACACCCATGCGGTCAAGCAGCACCGTGAGC‑‑‑‑‑‑‑‑CGC < 4:304655/149‑1 TCGTATGTGCGCCCCTGTTCGCCAATCACGTCACGAAGGGCAAGGATTTCGGAATAGCAGTCGCACAGGCGCTCAAGCGCGAAGCCATCTGCCTCGGTAAGCACACCCATGCGGTCAAGCAGCACCGTGAGC‑‑‑‑‑‑‑‑CGCCCCCGACCACTT > 1:169006/1‑147 GTATGTGCGCCCCTGTTCGCCAATCACGTCACGAAGGGCAAGGATTTCGGAATAGCAGTCGCACAGGCGCTCAAGCGCGAAGCCATCTGCCTCGGTAAGCACACCCATGCGGTCAAGCAGCACCGTGAGC‑‑‑‑‑‑‑‑CGCCCCCGACCACTTGAGC > 2:312014/1‑149 ACGTCACGAAGGGCAAGGATTTCGGAATAGCAGTCGCACAGGCGCTCAAGCGCGAAGCCATCTGCCTCGGTAAGCACACCCATGCGGTCAAGCAGCACCGTGAGC‑‑‑‑‑‑‑‑CGCCCCCGACCACTTGAGCTCAGATGGCCAGGTGGCGTGGGGG < 2:169006/148‑1 CGTCACGAAGGGCAAGGATTTCGGAATAGCAGTCGCACAGGCGCTCAAGCGCGAAGCCATCTGCCTCGGTAAGCACACCCATGCGGTCAAGCAGCACCGTGAGCCGCCCCCACGCCCCCGACCACTTGAGCTCAGATGGCCAGGTGGCG > 3:182692/1‑149 CGTCACGAAGGGCAAGGATTTCGGAATAGCAGTCGCACAGGCGCTCAAGCGCGAAGCCATCTGCCTCGGTAAGCACACCCATGCGGTCAAGCAGCACCGTGAGC‑‑‑‑‑‑‑‑CGCCCCCGACCACTTGAGCTCAGATGGCCAGGTGGCGTGGGGGCG < 1:312014/149‑1 ACGAAGGGCAAGGATTTCGGAATAGCAGTCGCACAGGCGCTCAAGCGCGAAGCCATCTGCCTCGGTAAGCACACCCATGCGGTCAAGCAGCACCGTGAGCCGCCCCCACGCCCCCGACCACTTGAGCTCAGATGGCCAGGTGGCGTGG < 4:182692/148‑1 CGAAGGGCAAGGATTTCGGAATAGCAGTCGCACAGGCGCTCAAGCGCGAAGCCATCTGCCTCGGTAAGCACACCCATGCGGTCAAGCAGCACCGTGAGC‑‑‑‑‑‑‑‑CGCCCCCGACCACTTGAGCTCAGATGGCCAGGTGGCGTGGGGGCGGCTCA < 7:365582/149‑1 CCCCCGACCACTTGAGCTCAGATGGCCAGGTGGCGTGGGGGCGGCTCACGGTGCTGCTTGACCGCATGGGTGTGCTTACCGAGGCAGATGGCTTCGCGCTTGAGCGCCTGTGCGACTGCTATTCCGAAATCCTTGCCCTTCGTGACGT > 5:62404/1‑148 CCGACCACTTGAGCTCAGATGGCCAGGTGGCGTGGGGGCGGCTCACGGTGCTGCTTGACCGCATGGGTGTGCTTACCGAGGCAGATGGCTTCGCGCTTGAGCGCCTGTGCGACTGCTATTCCGAAATCCTTGCCCTTCGTGACGTGATT > 6:171235/1‑149 CCGACCACTTGAGCTCAGATGGCCAGGTGGCGTGGGGGCGGCTCACGGTGCTGCTTGACCGCATGGGTGTGCTTACCGAGGCAGATGGCTTCGCGCTTGAGCGCCTGTGCGACTGCTATTCCGAAAT > 7:132584/1‑127 GGGTGCTGGTGGTTTCGTATGTGCGCCCCTGTTCGCCAATCACGTCACGAAGGGCAAGGATTTCGGAATAGCAGTCGCACAGGCGCTCAAGCGCGAAGCCATCTGCCTCGGTAAGCACACCCATGCGGTCAAGCAGCACCGTGAGC‑‑‑‑‑‑‑‑CGCCCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4403283‑4403435‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcccccGACCACTTGAGCTCAGATGGCCAGGTGGCGTGGGGGCGGCTCACGGTGCTGCTTGACCGCATGGGTGTGCTTACCGAGGCAGATGGCTTCGCGCTTGAGCGCCTGTGCGACTGCTATTCCGAAATCCTTGCCCTTCGTGACGTGATT < NC_002947/4403466‑4403320 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |