New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4403435	45 (0.730)	7 (0.120)	7/252	NT	13.9%	coding (146/468 nt)	PP_3882	terminase small subunit
	?	NC_002947	= 4403466	44 (0.750)					coding (115/468 nt)	PP_3882	terminase small subunit

CCAATCACGTCACGAAGGGCAAGGATTTCGGAATAGCAGTCGCACAGGCGCTCAAGCGCGAAGCCATCTGCCTCGGTAAGCACACCCATGCGGTCAAGCAGCACCGTGAGCCGCCCCCACGCCACCTGGCCATCTGAGCTCAAGTGGTCGGGGGCGCTGGGAATGCGCTTAGCTGGCTGAGGCTCGTTCTTGTTGATCGGGCGCTTACCGGGATTCCCTCTGACAAGCTTCAGCTCCGTCGGTGTGGGTCGTCTCCCGGCCATTTTTTGCTCTCAAAAAAAATCATTTCATTTCGCG  >  NC_002947/4403318‑4403614                                                                                                                                                     |                                                                                                                                                     ccAATCACGTCACGAAGGGCAAGGATTTCGGAATAGCAGTCGCACAGGCGCTCAAGCGCGAAGCCATCTGCCTCGGTAAGCACACCCTTGCGGTCAAGCAGCACCGTGAGCCGCCCCCACGCCACCTGGCCATCTGAGCTCAAGTGGTc                                                                                                                                                      <  5:378623/149‑1 (MQ=255)   aaTCACGTCACGAAGGGCAAGGATTTCGGAATAGCAGTCGCACAGGCGCTCAAGCGCGAAGCCATCTGCCTCGGTAAGCACACCCATGCGGTCAAGCAGCACCGTGAGCCGCCCCCACGCCACCTGGCCATCTGAGCTCAAGTGGTCgg                                                                                                                                                    >  6:171235‑M2/1‑147 (MQ=255)       acgtcacgAAGGGCAAGGATTTCGGAATAGCAGTCGCACAGGCGCTCAAGCGCGAAGCCATCTGCCTCGGTAAGCACACCCATGCGGTCAAGCAGCACCGTGAGCCGCCCCCACGCCACCTGGCCATCTGAGCTCAAGTGGTCggggg                                                                                                                                                 >  5:62404‑M2/1‑143 (MQ=255)            acgAAGGGCAAGGATTTCGGAATAGCAGTCGCACAGGCGCTCAAGCGCGAAGCCATCTGCCTCGGTAAGCACACCCATGCGGTCAAGCAGCACCGTGAGCCGCCCCCACGCCACCTGGCCATCTGAGCTCAAGTGGTCGGGGGCGCTg                                                                                                                                            <  2:130325/148‑1 (MQ=255)              gAAGGGCAAGGATTTCGGAATAGCAGTCGCACAGGCGCTCAAGCGCGAAGCCATCTGCCTCGGTAAGCACACCCATGCGGTCAAGCAGCACCGTGAGCCGCCCCCACGCCACCTGGCCATCTGAGCTCAAGTGGTCGGGGGCGCTggg                                                                                                                                          >  5:374083/1‑148 (MQ=255)                    cAAGGATTTCGGAATAGCAGTCGCACAGGCGCTCAAGCGCGAAGCCATCTGCCTCGGTAAGCACACCCATGCGGTCAAGCAGCACCGTGAGCCGCCCCCACGCCACCTGGCCATCTGAGCTCAAGTGGTCGGGGGCGCTGGGAATgcgc                                                                                                                                   >  8:52463/1‑149 (MQ=255)                    cAAGGATTTCGGAATAGCAGTCGCACAGGCGCTCAAGCGCGAAGCCATCTGCCTCGGTAAGCACACCCATGCGGTCAAGCAGCACCGTGAGCCGCCCCCACGCCACCTGGCCATCTGAGCTCAAGTGGTCGGGGGCGCTGGGAATgcgc                                                                                                                                   >  6:207076/1‑149 (MQ=255)                         aTTTCGGAATAGCAGTCGCACAGGCGCTCAAGCGCGAAGCCATCTGCCTCGGTAAGCACACCCATGCGGTCAAGCAGCACCGTGAGCCGCCCCCACGCCACCTGGCCATCTGAGCTCAAGTGGTCgg                                                                                                                                                    >  7:132584‑M2/1‑125 (MQ=255)                             cGGAATAGCAGTCGCACAGGCGCTCAAGCGCGAAGCCATCTGCCTCGGTAAGCACACCCATGCGGTCAAGCAGCACCGTGAGCCGCCCCCACGCCACCTGGCCATCTGAGCTCAAGTGGTCGGGGGCGCTGGGAATGCGCTTAgctggc                                                                                                                          >  3:260409/1‑149 (MQ=255)                             cGGAATAGCAGTCGCACAGGCGCTCAAGCGCGAAGCCATCTGCCTCGGTAAGCACACCCATGCGGTCAAGCAGCACCGTGAGCCGCCCCCACGCCACCTGGCCATCTGAGCTCAAGTGGTCGGGGGCGCTGGGAATGCGCTTAgctggc                                                                                                                          >  3:341825/1‑149 (MQ=255)                             cGGAATAGCAGTCGCACAGGCGCTCAAGCGCGAAGCCATCTGCCTCGGTAAGCACACCCATGCGGTCAAGCAGCACCGTGAGCCGCCCCCACGCCACCTGGCCATCTGAGCTCAAGTGGTCGGGGGCGCTGGGAATGCGCTTAgctgg                                                                                                                           <  3:171566/148‑1 (MQ=255)                              ggAATAGCAGTCGCACAGGCGCTCAAGCGCGAAGCCATCTGCCTCGGTAAGCACACCCATGCGGTGAAGCAGCACCGTGAGCCGCCCCCACGCCACCTGGCCATCTGAGCTCAAGTGGTCGGGGGCGCTGGGAATGCGCTTAgctggct                                                                                                                         >  4:60726/1‑149 (MQ=255)                              ggAATAGCAGTCGCACAGGCGCTCAAGCGCGAAGCCATCTGCCTCGGTAAGCACACCCATGCGGTCAAGCAGCACCGTGAGCCGCCCCCACGCCACCTGGCCATCTGAGCTCAAGTGGTCGGGGGCGCTGGGAATGCGCTTAgctggct                                                                                                                         >  6:11782/1‑149 (MQ=255)                              ggAANAGCAGTCGCACAGGCGCTCAAGCGCGAAGCCATCTGCCTCGGTAAGCACACCCATGCGGTCAAGCAGCACCGTGAGCCGCCCCCACGCCACCTGGCCATCTGAGCTCAAGTGGTCGGGGGCGCTGGGAATGCGCTTAgctggct                                                                                                                         >  5:379163/1‑149 (MQ=255)                                  tAGCAGTCGCACAGGCGCTCAAGCGCGAAGCCATCTGCCTCGGTAAGCACACCCATGCGGTCAAGCAGCACCGTGAGCCGCCCCCACGCCACCTGGCCATCTGAGCTCAAGTGGTCGGGGGCGCTGGGAATGCGCTTAGCTGGCTGAgg                                                                                                                     <  4:43758/149‑1 (MQ=255)                                     cAGTCGCACAGGCGCTCAAGCGCGAAGCCATCTGCCTCGGTAAGCACACCCATGCGGTCAAGCAGCACCGTGAGCCGCCCCCACGCCACCTGGCCATCTGAGCTCAAGTGGTCGGGGGCGCTGGGAATGCGCTTAGCTGGCTGAGGCTc                                                                                                                  >  6:380729/1‑149 (MQ=255)                                           cacaGGCGCTCAAGCGCGAAGCCATCTGCCTCGGTAAGCACACCCATGCGGTCAAGCAGCACCGTGAGCCGCCCCCACGCCACCTGGCCATCTGAGCTCAAGTGGTCGGGGGCGCTGGGAATGCGCTTAg                                                                                                                               >  6:171598/1‑130 (MQ=255)                                           cacaGGCGCTCAAGCGCGAAGCCATCTGCCTCGGTAAGCACACCCATGCGGTCAAGCAGCACCGTGAGCCGCCCCCACGCCACCTGGCCATCTGAGCTCAAGTGGTCGGGGGCGCTGGGAATGCGCTTAg                                                                                                                               <  5:171598/130‑1 (MQ=255)                                            acaGGCGCTCAAGCGCGAAGCCATCTGCCTCGGTAAGCACACCCATGCGGTCAAGCAGCACCGTGAGCCGCCCCCACGCCACCTGGCCATCTGAGCTCAAGTGGTCGGGGGCGCTGGGAATGCGCTTAGCTGGCTGAGGCTCGTTCttg                                                                                                           <  4:260409/149‑1 (MQ=255)                                             caGGCGCTCAAGCGCGAAGCCAGCTGCCTCGGTAAGCACACCCATGCGGTCAAGCAGCACCGTGAGCCGCCCCCACGCCACCTGGCCATCTGAGCTCAAGTGGTCGGGGGCGCTGGGAATGCGCTTAGCTGGCTGAGGCTCGTTCttgt                                                                                                          <  2:146801/149‑1 (MQ=255)                                                  gcTCAAGCGCGAAGCCATCTGCCTCGGTAAGCACACCCATGCGGTCAAGCAGCACCGTGAGCCGCCCCCACGCCACCTGGCCATCTGAGCTCAAGTGGTCGGGGGCGCTGGGAATGCGCTTAGCTGGCTGAGGCTCGTTCTTGTTGATc                                                                                                     >  5:204791/1‑149 (MQ=255)                                                      aaGCGCGAAGCCATCTGCCTCGGTAAGCACACCCATGCGGTCAAGCAGCACCGTGAGCCGCCCCCACGCCACCTGGCCATCTGAGCTCAAGTGGTCGGGGGCGCTGGGAATGCGCTTAGCTGGCTGAGGCTCGTTCTTGTTGATCgg                                                                                                   <  6:379163/147‑1 (MQ=255)                                                              aGCCATCTGCCTCGGTAAGCACACCCATGCGGTCAAGCAGCACCGTGAGCCGCCCCCACGCCACCTGGCCATCTGAGCTCAAGTGGTCGGGGGCGCTGGGAATGCGCTTAGCTGGCTGAGGCTCGTTCTTGTTGATCGGGCGCTTACCg                                                                                         <  4:355861/149‑1 (MQ=255)                                                                ccATCTGCCTCGGTAAGCACACCCATGCTGTCAAGCAGCACCGTGAGCCGCCCCCACGCCACCTGGCCATCTGAGCTCAAGTGGTCGGGGGCGCTGGGAATGCGCTTAGCTGGCTGAGGCTCGTTCTTGTTGATCGGGCGCTTACCggg                                                                                       <  6:386175/149‑1 (MQ=255)                                                                      gCCTCGGTAAGCACACCCATGCGGTCAAGCAGCACCGTGAGCCGCCCCCACGCCACCTGGCCATCTGAGCTCAAGTGGTCGGGGGCGCTgg                                                                                                                                           <  4:211658/91‑1 (MQ=255)                                                                      gCCTCGGTAAGCACACCCATGCGGTCAAGCAGCACCGTGAGCCGCCCCCACGCCACCTGGCCATCTGAGCTCAAGTGGTCGGGGGCGCTgg                                                                                                                                           >  3:211658/1‑91 (MQ=255)                                                                      gCCTCGGTAAGCACACCCATGCGGTCAAGCAGCACCGTGAGCCGCCCCCACGCCACCTGGCCATCTGAGCTCAAGTGGTCGGGGGCGCTGGGAATGCGCTTAGCTGGCTGAGGCTCGTTCTTGTTGATCGGGCGCTTACCGGGa                                                                                      <  7:81695/144‑1 (MQ=255)                                                                      gCCTCGGTAAGCACACCCATGCGGTCAAGCAGCACCGTGAGCCGCCCCCACGCCACCTGGCCATCTGAGCTCAAGTGGTCGGGGGCGCTGGGAATGCGCTTAGCTGGCTGAGGCTCGTTCTTGTTGATCGGGCGCTTACCGGGa                                                                                      >  8:81695/1‑144 (MQ=255)                                                                       ccTCGGTAAGCACACCCATGCGGTCAAGCAGCACCGTGAGCCGCCCCCACGCCACCTGGCCATCTGAGCTCAAGTGGTCGGGGGCGCTGGGAATGCGCTTAGCTGGCTGAGGCTCGTTCTTGTTGATCGGGCGCTTACCGGGATTcc                                                                                  <  1:367694/147‑1 (MQ=255)                                                                        cTCGGTAAGCACACCCATGCGGTCAAGCAGCACCGTGAGCCGCCCCCACGCCACCTGGCCATCTGAGCTCAAGTGGTCGGGGGCGCTGGGAATGCGCGTAGCTGGCTGAGGCTCGTTCTTGTTGATCGGGCGCTTACCGGGATTCCctc                                                                               <  3:264821/149‑1 (MQ=255)                                                                                gCACACCCTTGCGGTCAAGCCGCTCCGTGCGCCGCCCCCCCGGCACCTGGCCATCTGAGCTCTAGTGGTCGGGGGCGCTGGGAATGCGCTTAGCTGGCTGAGGCTCGTTCTTGTTGATCGGGCGCTTACCGGGATTCCCTCTGACAAGc                                                                       <  6:374083/149‑1 (MQ=255)                                                                                    acCCATGCGGTCAAGCAGCACCGTGAGCCGCCCCCACGCCACCTGGCCATCTGAGCTCAAGTGGTCGGGGGCGCTGGGAATGCGCTTAGCTGGCTGAGGCTCGTTCTTGTTGATCGGGCGCTTACCGGGATTCCCTCTGACAAGCtt                                                                     >  2:191361/1‑147 (MQ=255)                                                                                        aTGCGGTCAAGCAGCACCGTGAGCCGCCCCCACGCCACCTGGCCATCTGAGCTCAAGTGGTCGGGGGCGCTGGGAATGCGCTTAGCTGGCTGAGGCTCGTTCTTGTTGATCGGGCGCTTACCGGGATTCCCTCTGACAAGCTTCAGCTc                                                               >  4:171449/1‑149 (MQ=255)                                                                                           cGGTCAAGCAGCACCGTGAGCCGCCCCCACGCCACCTGGCCATCTGAGCTCAAGTGGTCGGGGGCGCTGGGAATGCGCTTAGCTGGCTGAGGCTCGTTCTTGTTGATCGGGCGCTTACCGGGATTCCCTCTGACAAGCTTCAGCTCCGt                                                            <  5:207076/149‑1 (MQ=255)                                                                                                aaGCAGCACCGTGAGCCGCCCCCACGCCACCTGGCCATCTGAGCTCAAGTGGTCGGGGGCGCTGGGAATGCGCTTAGCTGGCTGAGGCTCGTTCTTGTTGATCGGGCGCTTACCGGGATTCCCTCTGACAAGCTTCAGCTCCGTCGgtg                                                       >  6:148562/1‑149 (MQ=255)                                                                                                 agcagcACCGTGAGCCGCCCCCACGCCACCTGGCCATCTGAGCTCAAGTGGTCGGGGGCGCTGGGAATGCGCTTAGCTGGCTGAGGCTCGTTCTTGTTGATCGGGCGCTTACCGGGATTCCCTCTGACAAGCTTCAGCTCCGTCGgtgt                                                      <  7:16313/149‑1 (MQ=255)                                                                                                 agcagcACCGTGAGCCGCCCCCACGCCACCTGGCCATCTGAGCTCAAGTGGTCGGGGGCGCTGGGAATGCGCTTAGCTGGCTGAGGCTCGTTCTTGTTGATCGGGCGCTTACCGGGATTCCCTCTGACAAGCTTCAGCTCCGTCGgtgt                                                      >  8:16313/1‑149 (MQ=255)                                                                                                 agcagcACCGTGAGCCGCCCCCACGCCACCTGGCCATCTGAGCTCAAGTGGTCGGGGGCGCTGGGAATGCGCTTAGCTGGCTGAGGCTCGTTCTTGTTGATCGGGCGCTTACCGGGATTCCCTCTGACAAGCTTCAGCTCCGTCGgtgt                                                      <  3:60726/149‑1 (MQ=255)                                                                                                   cagcaCCGTGAGCCGCCCCCACGCCACCTGGCCATCTGAGCTCAAGTGGTCGGGGGCGCTGGGAATGCGCTTAGCTGGCTGAGGCTCGTTCTTGTTGATCGGGCGCTTACCGGGATTCCCTCTGACAAGCTTCAGCTCCGTCGGTGTgg                                                    <  5:380729/149‑1 (MQ=255)                                                                                                   cagcaCCGTGAGCCGCCCCCACGCCACCTGGCCATCTGAGCTCAAGTGGTCGGGGGCGCTGGGAATGCGCTTAGCTGGCTGAGGCTCGTTCTTGTTGATCGGGCGCTTACCGGGATTCCCTCTGACAAGCTTCAGCTCCGGCGGTGTgg                                                    <  7:52463/149‑1 (MQ=255)                                                                                                    aggaCCGGGAGCCGCCCCCACGCCTCCTGGCCATCTGAGCTCAAGTGGTCGGGGGCGCTGGGAATGCGCTTAGCTGGCTGAGGCTCGTTCTTGTTGATCGGGCGCTTACCGGGATTCCCTCTGACAAGCTTCAGCTCCGTCGGTGTggg                                                   <  4:324696/146‑1 (MQ=255)                                                                                                           tGAGCCGCCCCCACGCCACCTGGCCATCTGAGCTCAAGTGGTCgggggcggctcacggtgctgcttgaccgcatgggtgtgcttaccgaggcagatggcttcgcgcttgagcgcctgtgcgactgctattccgaaatccttgcccttcg                                            <  7:365582‑M2/149‑107 (MQ=255)                                                                                                               ccgccCCCACGCCACCTGGCCATCTGAGCTCAAGTGGTCGGGGGCGCTGGGAATGCGCTTAGCTGGCTGAGGCTCGTTCTTGTTGATCGGGCGCTTACCGGGATTCCCTCTGACAAGCTTCAGCTCCGTCGGTGTGGGTCGTCTCCCgg                                        >  4:133036/1‑149 (MQ=255)                                                                                                                cgccCCCACGCCACCTGGCCATCTGAGCTCAAGTGGTCgggggcggctcacggtgctgcttgaccgcatgggtgtgcttaccgaggcagatggcttcgcgcttgagcgcctgtgcgactgctattccgaaatccttgcccttcgtgacg                                       <  1:312014‑M2/149‑112 (MQ=255)                                                                                                                 gccCCCACGCCACCTGGCCATCTGAGCTCAAGTGGTCGGGGGCGCTGGGAATGCGCTTAGCTGGCTGAGGCTCGTTCTTGTTGATCGGGCGCTTACCGGGATTCCCTCTGACAAGCTTCAGCTCCGTCGGTGTGGGTCGTCTCCCGGcc                                      <  4:341825/149‑1 (MQ=255)                                                                                                                  cccccACGCCACCTGGCCATCTGAGCTCAAGTGGTCgggggcggctcacggtgctgcttgaccgcatgggtgtgcttaccgaggcagatggcttcgcgcttgagcgcctgtgcgactgctattccgaaatccttgcccttcgtgacgt                                      <  2:169006‑M2/148‑113 (MQ=255)                                                                                                                    cccACGCCACCTGGCCATCTGAGCTCAAGTGGTCGGGGGCGCTGGGAATGCGCTTAGCTGGCTGAGGCTCGTTCTTGTTGATCGGGCGCTTACCGGGATTCCCTCTGACAAGCTTCAGCTCCGTCGGTGTGGGTCGTCTCCCGGCCAtt                                   >  5:331619/1‑149 (MQ=255)                                                                                                                    cccACGCCACCTGGCCATCTGAGCTCAAGTGGTCGGGGGCGCTGGGAATGCGCTTAGCTGGCTGAGGCTCGTTCTTGTTGATCGGGCGCTTACCGGGATTCCCTCTGACAAGCTTCAGCTCCGTCGGTGTGGGTCGTCTCCCGGCCAtt                                   >  5:332598/1‑149 (MQ=255)                                                                                                                     ccACGCCACCTGGCCATCTGAGCTCAAGTGGTCgggggcgtgggggcggctcacggtgctgcttgaccgcatgggtgtgcttaccgaggcagatggcttcgcgcttgagcgcctgtgcgactgctattccgaaatccttgcccttcgt                                   <  4:182692‑M2/148‑116 (MQ=255)                                                                                                                        cGCCACCTGGCCATCTGAGCTCAAGTGGTCgggggcgtgggggcggctcacggtgctgcttgaccgcatgggtgtgcttaccgaggcagatggcttcgcgcttgagcgcctgtgcgactgctattccgaaatccttgcccttcgtgacg                               >  3:182692‑M2/1‑30 (MQ=255)                                                                                                                        cGCCACCTGGCCATCTGAGCTCAAGTGGTCGGGGGCGCTGGGAATGCGCTTAGCTGGCTGAGGCTCGTTCTTGTTGATCGGGCGCTTACCGGGATTCCCTCTGACAAGCTTCAGCTCCGTCGGTGTGGGTCGTCTCCCGGCCAtttttt                               <  6:69677/149‑1 (MQ=255)                                                                                                                           cACCTGGCCATCTGAGCTCAAGTGGTCGGGGGCGCTGGGAATGCGCTTAGCTGGCTGAGGCTCGTTCTTGTTGATCGGGCGCTTACCGGGATTCCCTCTGACAAGCTTCAGCTCCGTCGGTGTGGGTCGTCTCCCGGCCATTTTTTGct                            <  5:11782/149‑1 (MQ=255)                                                                                                                             ccTGGCCATCTGAGCTCAAGTGGTCGGGGGCGCTGGGAATGCGCTTAGCTGGCTGAGGCTCGTTCTTGTTGATCGGGCGCTTACCGGGATTCCCTCTGACAAGCTTCAGCTCCGTCGGTGTGGGTCGTCTCCCGGCCATTTTTTGctct                          >  3:187985/1‑149 (MQ=255)                                                                                                                               tGGCCATCTGAGCTCAAGTGGTCGGGGGCGCTGGGAATGCGCTTAGCTGGCTGAGGCTCGTTCTTGTTGATCGGGCGCTTACCGGGATTCCCTCTGACAAGCTTCAGCTCCGTCGGTGTGGGTCGTCTCCCGGCCATTTTTTGCtctc                         >  5:27737/1‑148 (MQ=255)                                                                                                                                          gCTCAAGTGGTCgggggcggctcacggtgctgcttgaccgcatgggtgtgcttaccgaggcagatggcttcgcgcttgagcgcctgtgcgactgctattccgaaatccttgcccttcgtgacgtgattggcgaacaggggcgcacatac             >  2:312014‑M2/1‑12 (MQ=255)                                                                                                                                              aaGTGGTCgggggcggctcacggtgctgcttgaccgcatgggtgtgcttaccgaggcagatggcttcgcgcttgagcgcctgtgcgactgctattccgaaatccttgcccttcgtgacgtgattggcgaacaggggcgcacatacga           >  1:169006‑M2/1‑8 (MQ=255)                                                                                                                                              aaGTGGTCGGGGGCGCTGGGAATGCGCTTAGCTGGCTGAGGCTCGTTCTTGTTGATCGGGCGCTTACCGGGATTCCCTCTGACAAGCTTCAGCTCCGTCGGTGTGGGTCGTCTCCCGGCCATTTTTTGCTCTCAAAAAAAAtcatttca         <  5:148562/149‑1 (MQ=255)                                                                                                                                              aaGTGGTCGGGGGCGCTGGGAATGCGCTTAGCTGGCTGAGGCTCGTTCTTGTTGATCGGGCGCTTACCGGGATTCCCTCTGACAAGCTTCAGCTCCGTCGGTGTGGGTCGTCTCCCGGCCATTTTTTGCTCTCAAAAAAAAtcattt           <  1:191361/147‑1 (MQ=255)                                                                                                                                              aaGTGGTCGGGGGCGCTGGGAATGCGCTTAGCTGGCTGAGGCTCGTTCTTGTCGATCGGGCGCTTACCGGGATTCCCTCTGACAAGCTTCAGCTCCGTCGGTGTGGGTCGTCTCCCGGCCATTTTTTGCTCTCAAAAAAAAtcatttca         >  2:125532/1‑149 (MQ=255)                                                                                                                                                    tCGGGGGCGCTGGGAATGCGCTTAGCTGGCTGAGGCTCGTTCTTGTTGATCGGGCGCTTACCGGGATTCCCTCTGACAAGCTTCAGCTCCGTCGGTGTGGGTCGTCTCCCGGCCATTTTTTGCTCTCAAAAAAAATCATTTCATTTcgc   >  3:268555/1‑149 (MQ=255)                                                                                                                                                     cGGGGGCGCTGGGAATGCGCTTAGCTGGCTGAGGCTCGTTCTTGTTGATCGGGCGCTTACCGGGATTCCCTCTGACAAGCTTCAGCTCCGTCGGTGTGGGTCGTCTCCCGGCCATTTTTTGCTCTCAAAAAAAATCATTTCATTTcgcg  >  7:11496/1‑149 (MQ=255)                                                                                                                                                     |                                                                                                                                                     CCAATCACGTCACGAAGGGCAAGGATTTCGGAATAGCAGTCGCACAGGCGCTCAAGCGCGAAGCCATCTGCCTCGGTAAGCACACCCATGCGGTCAAGCAGCACCGTGAGCCGCCCCCACGCCACCTGGCCATCTGAGCTCAAGTGGTCGGGGGCGCTGGGAATGCGCTTAGCTGGCTGAGGCTCGTTCTTGTTGATCGGGCGCTTACCGGGATTCCCTCTGACAAGCTTCAGCTCCGTCGGTGTGGGTCGTCTCCCGGCCATTTTTTGCTCTCAAAAAAAATCATTTCATTTCGCG  >  NC_002947/4403318‑4403614

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.