New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4403435	45 (0.730)	7 (0.120)	7/252	NT	13.9%	coding (146/468 nt)	PP_3882	terminase small subunit
	?	NC_002947	= 4403466	44 (0.750)					coding (115/468 nt)	PP_3882	terminase small subunit

TGGTGGTTTCGTATGTGCGCCCCTGTTCGCCAATCACGTCACGAAGGGCAAGGATTTCGGAATAGCAGTCGCACAGGCGCTCAAGCGCGAAGCCATCTGCCTCGGTAAGCACACCCATGCGGTCAAGCAGCACCGTGAGC‑‑‑‑‑‑‑‑CGCCCCCACGCCACCTGGCCATCTGAGCTCAAGTGGTCGGGGGCGCTGGGAATGCGCTTAGCTGGCTGAGGCTCGTTCTTGTTGATCGGGCGCTTACCGGGATTCCCTCTGACAAGCTTCAGCTCCGTCGGTGTGGGTCGTCTCCCGGCCATTT  >  NC_002947/4403289‑4403582                                                                                                                                                           |                                                                                                                                                    tggtggTTTCGTATGAGCGCCCCTGTTCGCCAATCACGTCACGAAGGGCAAGGATTTCGGAATAGCAGTCGCACAGGCGCTCAAGCGCGAAGCCATCTGCCTCGGTAAGCACACCCATGCGGTCAAGCAGCACCGTGAGC‑‑‑‑‑‑‑‑CGCCCCCAc                                                                                                                                                   >  3:43758/1‑149 (MQ=255)   gtgttTTCGTATGTGCGCCCCTGTTCGCCAATCACGTCACGAAGGGCAAGGATTTCGGAATAGCAGTCGCACAGGCGCTCAAGCGCGAAGCCATCTGCCTCGGTAAGCACACCCATGCGGTCAAGCAGCACCGTGAGC‑‑‑‑‑‑‑‑CGCCCCCAc                                                                                                                                                   <  5:200771/147‑1 (MQ=255)     ggtTTCGTATGTGCGCCCCTGTTCGCCAATCACGTCACGAAGGGCAAGGATTTCGGAATAGCAGTCGCACAGGCGCTCAAGCGCGAAGCCATCTGCCTCGGTAAGCACACCCATGCGGTCAAGCAGCACCGTGAGC‑‑‑‑‑‑‑‑CGCCCCCACGCCa                                                                                                                                               >  5:69677/1‑149 (MQ=255)         tCGTATGTGCGCCCCTGTTCGCCAATCACGTCACGAAGGGCAAGGATTTCGGAATAGCAGTCGCACAGGCGCTCAAGCGCGAAGCCATCTGCCTCGGTAAGCACACCCATGCGGTCAAGCAGCACCGTGAGC‑‑‑‑‑‑‑‑CGCCCCCgaccactt                                                                                                                                             >  1:169006‑M1/1‑139 (MQ=255)         tCGTATGTGCGCCCCTGTTCGCCAATCACGTCACGAAGGGCAAGGATTTCGGAATAGCAGTCGCACAGGCGCTCAAGCGCGAAGCCATCTGCCTCGGTAAGCACACCCATGCGGTCAAGCAGCACCGTGAGC‑‑‑‑‑‑‑‑CGCCCCCACGCCACCt                                                                                                                                            <  6:368241/148‑1 (MQ=255)           gTATGTGCGCCCCTGTTCGCCAATCACGTCACGAAGGGCAAGGATTTCGGAATAGCAGTCGCACAGGCGCTCAAGCGCGAAGCCATCTGCCTCGGTAAGCACACCCATGCGGTCAAGCAGCACCGTGAGC‑‑‑‑‑‑‑‑CGCCCCCgaccacttgagc                                                                                                                                         >  2:312014‑M1/1‑137 (MQ=255)                tgCGCCCCTGTTCGCCAATCACGTCACGAAGGGCAAGGATTTCGGAATAGCAGTCGCACAGGCGCTCAAGCGCGAAGCCATCTGCCTCGGTAAGCACACCCATGCGGTCAAGCAGCACCGTGAGC‑‑‑‑‑‑‑‑CGCCCCCACg                                                                                                                                                  >  5:216824/1‑135 (MQ=255)                tgCGCCCCTGTTCGCCAATCACGTCACGAAGGGCAAGGATTTCGGAATAGCAGTCGCACAGGCGCTCAAGCGCGAAGCCATCTGCCTCGGTAAGCACACCCATGCGGTCAAGCAGCACCGTGAGC‑‑‑‑‑‑‑‑CGCCCCCACg                                                                                                                                                  <  6:216824/135‑1 (MQ=255)                  cgcCCCTGTTCGCCAATCACGTCACGAAGGGCAAGGATTTCGGAATAGCAGTCGCACAGGCGCTCAAGCGCGAAGCCATCTGCCTCGGTAAGCACACCCATGCGGTCAAGCAGCACCGTGAGC‑‑‑‑‑‑‑‑CGCCCCCACGCCACCTGGCCATCTGa                                                                                                                                  <  1:248082/149‑1 (MQ=255)                    ccccTGTTCGCCAATCACGTCACGAAGGGCAAGGATTTCGGAATAGCAGTCGCACAGGCGCTCAAGCGCGAAGCCATCTGCCTCGGTAAGCACACCCATGCGGTCAAGCAGCACCGTGAGC‑‑‑‑‑‑‑‑CGCCCCCACGCCACCTGGCCATCTGAGc                                                                                                                                >  3:355861/1‑149 (MQ=255)                      ccTGTTCGCCAATCACGTCACGAAGGGCAAGGATTTCGGAATAGCAGTCGCACAGGCGCTCAAGCGCGAAGCCATCTGCCTCGGTAAGCACACCCATGCGGTCAAGCAGCACCGTGAGC‑‑‑‑‑‑‑‑CGCCCCCACGCCACCTGGCCATCTGAGCt                                                                                                                               >  5:171235/1‑148 (MQ=255)                              ccAATCACGTCACGAAGGGCAAGGATTTCGGAATAGCAGTCGCACAGGCGCTCAAGCGCGAAGCCATCTGCCTCGGTAAGCACACCCTTGCGGTCAAGCAGCACCGTGAGC‑‑‑‑‑‑‑‑CGCCCCCACGCCACCTGGCCATCTGAGCTCAAGTGGTc                                                                                                                      <  5:378623/149‑1 (MQ=255)                                aaTCACGTCACGAAGGGCAAGGATTTCGGAATAGCAGTCGCACAGGCGCTCAAGCGCGAAGCCATCTGCCTCGGTAAGCACACCCATGCGGTCAAGCAGCACCGTGAGC‑‑‑‑‑‑‑‑CGCCCCCACGCCACCTGGCCATCTGAGCTCAAGTGGTCgg                                                                                                                    >  6:171235‑M2/1‑147 (MQ=255)                                    acgtcacgAAGGGCAAGGATTTCGGAATAGCAGTCGCACAGGCGCTCAAGCGCGAAGCCATCTGCCTCGGTAAGCACACCCATGCGGTCAAGCAGCACCGTGAGC‑‑‑‑‑‑‑‑CGCCCCCgaccacttgagctcagatggccaggtggcgtggggg                                                                                                                 <  2:169006‑M1/148‑37 (MQ=255)                                    acgtcacgAAGGGCAAGGATTTCGGAATAGCAGTCGCACAGGCGCTCAAGCGCGAAGCCATCTGCCTCGGTAAGCACACCCATGCGGTCAAGCAGCACCGTGAGC‑‑‑‑‑‑‑‑CGCCCCCACGCCACCTGGCCATCTGAGCTCAAGTGGTCggggg                                                                                                                 >  5:62404‑M2/1‑143 (MQ=255)                                     cgtcacgAAGGGCAAGGATTTCGGAATAGCAGTCGCACAGGCGCTCAAGCGCGAAGCCATCTGCCTCGGTAAGCACACCCATGCGGTCAAGCAGCACCGTGAGCCGCCCCCACGCCCCCgaccacttgagctcagatggccaggtggcg                                                                                                                       >  3:182692‑M1/1‑119 (MQ=255)                                     cgtcacgAAGGGCAAGGATTTCGGAATAGCAGTCGCACAGGCGCTCAAGCGCGAAGCCATCTGCCTCGGTAAGCACACCCATGCGGTCAAGCAGCACCGTGAGC‑‑‑‑‑‑‑‑CGCCCCCgaccacttgagctcagatggccaggtggcgtgggggcg                                                                                                               <  1:312014‑M1/149‑39 (MQ=255)                                         acgAAGGGCAAGGATTTCGGAATAGCAGTCGCACAGGCGCTCAAGCGCGAAGCCATCTGCCTCGGTAAGCACACCCATGCGGTCAAGCAGCACCGTGAGCCGCCCCCACGCCCCCgaccacttgagctcagatggccaggtggcgtgg                                                                                                                    <  4:182692‑M1/148‑34 (MQ=255)                                         acgAAGGGCAAGGATTTCGGAATAGCAGTCGCACAGGCGCTCAAGCGCGAAGCCATCTGCCTCGGTAAGCACACCCATGCGGTCAAGCAGCACCGTGAGC‑‑‑‑‑‑‑‑CGCCCCCACGCCACCTGGCCATCTGAGCTCAAGTGGTCGGGGGCGCTg                                                                                                            <  2:130325/148‑1 (MQ=255)                                          cgAAGGGCAAGGATTTCGGAATAGCAGTCGCACAGGCGCTCAAGCGCGAAGCCATCTGCCTCGGTAAGCACACCCATGCGGTCAAGCAGCACCGTGAGC‑‑‑‑‑‑‑‑CGCCCCCgaccacttgagctcagatggccaggtggcgtgggggcggctca                                                                                                          <  7:365582‑M1/149‑44 (MQ=255)                                           gAAGGGCAAGGATTTCGGAATAGCAGTCGCACAGGCGCTCAAGCGCGAAGCCATCTGCCTCGGTAAGCACACCCATGCGGTCAAGCAGCACCGTGAGC‑‑‑‑‑‑‑‑CGCCCCCACGCCACCTGGCCATCTGAGCTCAAGTGGTCGGGGGCGCTggg                                                                                                          >  5:374083/1‑148 (MQ=255)                                                 cAAGGATTTCGGAATAGCAGTCGCACAGGCGCTCAAGCGCGAAGCCATCTGCCTCGGTAAGCACACCCATGCGGTCAAGCAGCACCGTGAGC‑‑‑‑‑‑‑‑CGCCCCCACGCCACCTGGCCATCTGAGCTCAAGTGGTCGGGGGCGCTGGGAATgcgc                                                                                                   >  6:207076/1‑149 (MQ=255)                                                 cAAGGATTTCGGAATAGCAGTCGCACAGGCGCTCAAGCGCGAAGCCATCTGCCTCGGTAAGCACACCCATGCGGTCAAGCAGCACCGTGAGC‑‑‑‑‑‑‑‑CGCCCCCACGCCACCTGGCCATCTGAGCTCAAGTGGTCGGGGGCGCTGGGAATgcgc                                                                                                   >  8:52463/1‑149 (MQ=255)                                                      aTTTCGGAATAGCAGTCGCACAGGCGCTCAAGCGCGAAGCCATCTGCCTCGGTAAGCACACCCATGCGGTCAAGCAGCACCGTGAGC‑‑‑‑‑‑‑‑CGCCCCCACGCCACCTGGCCATCTGAGCTCAAGTGGTCgg                                                                                                                    >  7:132584‑M2/1‑125 (MQ=255)                                                          cGGAATAGCAGTCGCACAGGCGCTCAAGCGCGAAGCCATCTGCCTCGGTAAGCACACCCATGCGGTCAAGCAGCACCGTGAGC‑‑‑‑‑‑‑‑CGCCCCCACGCCACCTGGCCATCTGAGCTCAAGTGGTCGGGGGCGCTGGGAATGCGCTTAgctggc                                                                                          >  3:341825/1‑149 (MQ=255)                                                          cGGAATAGCAGTCGCACAGGCGCTCAAGCGCGAAGCCATCTGCCTCGGTAAGCACACCCATGCGGTCAAGCAGCACCGTGAGC‑‑‑‑‑‑‑‑CGCCCCCACGCCACCTGGCCATCTGAGCTCAAGTGGTCGGGGGCGCTGGGAATGCGCTTAgctggc                                                                                          >  3:260409/1‑149 (MQ=255)                                                          cGGAATAGCAGTCGCACAGGCGCTCAAGCGCGAAGCCATCTGCCTCGGTAAGCACACCCATGCGGTCAAGCAGCACCGTGAGC‑‑‑‑‑‑‑‑CGCCCCCACGCCACCTGGCCATCTGAGCTCAAGTGGTCGGGGGCGCTGGGAATGCGCTTAgctgg                                                                                           <  3:171566/148‑1 (MQ=255)                                                           ggAATAGCAGTCGCACAGGCGCTCAAGCGCGAAGCCATCTGCCTCGGTAAGCACACCCATGCGGTGAAGCAGCACCGTGAGC‑‑‑‑‑‑‑‑CGCCCCCACGCCACCTGGCCATCTGAGCTCAAGTGGTCGGGGGCGCTGGGAATGCGCTTAgctggct                                                                                         >  4:60726/1‑149 (MQ=255)                                                           ggAATAGCAGTCGCACAGGCGCTCAAGCGCGAAGCCATCTGCCTCGGTAAGCACACCCATGCGGTCAAGCAGCACCGTGAGC‑‑‑‑‑‑‑‑CGCCCCCACGCCACCTGGCCATCTGAGCTCAAGTGGTCGGGGGCGCTGGGAATGCGCTTAgctggct                                                                                         >  6:11782/1‑149 (MQ=255)                                                           ggAANAGCAGTCGCACAGGCGCTCAAGCGCGAAGCCATCTGCCTCGGTAAGCACACCCATGCGGTCAAGCAGCACCGTGAGC‑‑‑‑‑‑‑‑CGCCCCCACGCCACCTGGCCATCTGAGCTCAAGTGGTCGGGGGCGCTGGGAATGCGCTTAgctggct                                                                                         >  5:379163/1‑149 (MQ=255)                                                               tAGCAGTCGCACAGGCGCTCAAGCGCGAAGCCATCTGCCTCGGTAAGCACACCCATGCGGTCAAGCAGCACCGTGAGC‑‑‑‑‑‑‑‑CGCCCCCACGCCACCTGGCCATCTGAGCTCAAGTGGTCGGGGGCGCTGGGAATGCGCTTAGCTGGCTGAgg                                                                                     <  4:43758/149‑1 (MQ=255)                                                                  cAGTCGCACAGGCGCTCAAGCGCGAAGCCATCTGCCTCGGTAAGCACACCCATGCGGTCAAGCAGCACCGTGAGC‑‑‑‑‑‑‑‑CGCCCCCACGCCACCTGGCCATCTGAGCTCAAGTGGTCGGGGGCGCTGGGAATGCGCTTAGCTGGCTGAGGCTc                                                                                  >  6:380729/1‑149 (MQ=255)                                                                        cacaGGCGCTCAAGCGCGAAGCCATCTGCCTCGGTAAGCACACCCATGCGGTCAAGCAGCACCGTGAGC‑‑‑‑‑‑‑‑CGCCCCCACGCCACCTGGCCATCTGAGCTCAAGTGGTCGGGGGCGCTGGGAATGCGCTTAg                                                                                               <  5:171598/130‑1 (MQ=255)                                                                        cacaGGCGCTCAAGCGCGAAGCCATCTGCCTCGGTAAGCACACCCATGCGGTCAAGCAGCACCGTGAGC‑‑‑‑‑‑‑‑CGCCCCCACGCCACCTGGCCATCTGAGCTCAAGTGGTCGGGGGCGCTGGGAATGCGCTTAg                                                                                               >  6:171598/1‑130 (MQ=255)                                                                         acaGGCGCTCAAGCGCGAAGCCATCTGCCTCGGTAAGCACACCCATGCGGTCAAGCAGCACCGTGAGC‑‑‑‑‑‑‑‑CGCCCCCACGCCACCTGGCCATCTGAGCTCAAGTGGTCGGGGGCGCTGGGAATGCGCTTAGCTGGCTGAGGCTCGTTCttg                                                                           <  4:260409/149‑1 (MQ=255)                                                                          caGGCGCTCAAGCGCGAAGCCAGCTGCCTCGGTAAGCACACCCATGCGGTCAAGCAGCACCGTGAGC‑‑‑‑‑‑‑‑CGCCCCCACGCCACCTGGCCATCTGAGCTCAAGTGGTCGGGGGCGCTGGGAATGCGCTTAGCTGGCTGAGGCTCGTTCttgt                                                                          <  2:146801/149‑1 (MQ=255)                                                                               gcTCAAGCGCGAAGCCATCTGCCTCGGTAAGCACACCCATGCGGTCAAGCAGCACCGTGAGC‑‑‑‑‑‑‑‑CGCCCCCACGCCACCTGGCCATCTGAGCTCAAGTGGTCGGGGGCGCTGGGAATGCGCTTAGCTGGCTGAGGCTCGTTCTTGTTGATc                                                                     >  5:204791/1‑149 (MQ=255)                                                                                   aaGCGCGAAGCCATCTGCCTCGGTAAGCACACCCATGCGGTCAAGCAGCACCGTGAGC‑‑‑‑‑‑‑‑CGCCCCCACGCCACCTGGCCATCTGAGCTCAAGTGGTCGGGGGCGCTGGGAATGCGCTTAGCTGGCTGAGGCTCGTTCTTGTTGATCgg                                                                   <  6:379163/147‑1 (MQ=255)                                                                                           aGCCATCTGCCTCGGTAAGCACACCCATGCGGTCAAGCAGCACCGTGAGC‑‑‑‑‑‑‑‑CGCCCCCACGCCACCTGGCCATCTGAGCTCAAGTGGTCGGGGGCGCTGGGAATGCGCTTAGCTGGCTGAGGCTCGTTCTTGTTGATCGGGCGCTTACCg                                                         <  4:355861/149‑1 (MQ=255)                                                                                             ccATCTGCCTCGGTAAGCACACCCATGCTGTCAAGCAGCACCGTGAGC‑‑‑‑‑‑‑‑CGCCCCCACGCCACCTGGCCATCTGAGCTCAAGTGGTCGGGGGCGCTGGGAATGCGCTTAGCTGGCTGAGGCTCGTTCTTGTTGATCGGGCGCTTACCggg                                                       <  6:386175/149‑1 (MQ=255)                                                                                                   gCCTCGGTAAGCACACCCATGCGGTCAAGCAGCACCGTGAGC‑‑‑‑‑‑‑‑CGCCCCCACGCCACCTGGCCATCTGAGCTCAAGTGGTCGGGGGCGCTgg                                                                                                           >  3:211658/1‑91 (MQ=255)                                                                                                   gCCTCGGTAAGCACACCCATGCGGTCAAGCAGCACCGTGAGC‑‑‑‑‑‑‑‑CGCCCCCACGCCACCTGGCCATCTGAGCTCAAGTGGTCGGGGGCGCTgg                                                                                                           <  4:211658/91‑1 (MQ=255)                                                                                                   gCCTCGGTAAGCACACCCATGCGGTCAAGCAGCACCGTGAGC‑‑‑‑‑‑‑‑CGCCCCCACGCCACCTGGCCATCTGAGCTCAAGTGGTCGGGGGCGCTGGGAATGCGCTTAGCTGGCTGAGGCTCGTTCTTGTTGATCGGGCGCTTACCGGGa                                                      >  8:81695/1‑144 (MQ=255)                                                                                                   gCCTCGGTAAGCACACCCATGCGGTCAAGCAGCACCGTGAGC‑‑‑‑‑‑‑‑CGCCCCCACGCCACCTGGCCATCTGAGCTCAAGTGGTCGGGGGCGCTGGGAATGCGCTTAGCTGGCTGAGGCTCGTTCTTGTTGATCGGGCGCTTACCGGGa                                                      <  7:81695/144‑1 (MQ=255)                                                                                                    ccTCGGTAAGCACACCCATGCGGTCAAGCAGCACCGTGAGC‑‑‑‑‑‑‑‑CGCCCCCACGCCACCTGGCCATCTGAGCTCAAGTGGTCGGGGGCGCTGGGAATGCGCTTAGCTGGCTGAGGCTCGTTCTTGTTGATCGGGCGCTTACCGGGATTcc                                                  <  1:367694/147‑1 (MQ=255)                                                                                                     cTCGGTAAGCACACCCATGCGGTCAAGCAGCACCGTGAGC‑‑‑‑‑‑‑‑CGCCCCCACGCCACCTGGCCATCTGAGCTCAAGTGGTCGGGGGCGCTGGGAATGCGCGTAGCTGGCTGAGGCTCGTTCTTGTTGATCGGGCGCTTACCGGGATTCCctc                                               <  3:264821/149‑1 (MQ=255)                                                                                                             gCACACCCTTGCGGTCAAGCCGCTCCGTGCGC‑‑‑‑‑‑‑‑CGCCCCCCCGGCACCTGGCCATCTGAGCTCTAGTGGTCGGGGGCGCTGGGAATGCGCTTAGCTGGCTGAGGCTCGTTCTTGTTGATCGGGCGCTTACCGGGATTCCCTCTGACAAGc                                       <  6:374083/149‑1 (MQ=255)                                                                                                                 acCCATGCGGTCAAGCAGCACCGTGAGC‑‑‑‑‑‑‑‑CGCCCCCACGCCACCTGGCCATCTGAGCTCAAGTGGTCGGGGGCGCTGGGAATGCGCTTAGCTGGCTGAGGCTCGTTCTTGTTGATCGGGCGCTTACCGGGATTCCCTCTGACAAGCtt                                     >  2:191361/1‑147 (MQ=255)                                                                                                                     aTGCGGTCAAGCAGCACCGTGAGC‑‑‑‑‑‑‑‑CGCCCCCACGCCACCTGGCCATCTGAGCTCAAGTGGTCGGGGGCGCTGGGAATGCGCTTAGCTGGCTGAGGCTCGTTCTTGTTGATCGGGCGCTTACCGGGATTCCCTCTGACAAGCTTCAGCTc                               >  4:171449/1‑149 (MQ=255)                                                                                                                        cGGTCAAGCAGCACCGTGAGC‑‑‑‑‑‑‑‑CGCCCCCACGCCACCTGGCCATCTGAGCTCAAGTGGTCGGGGGCGCTGGGAATGCGCTTAGCTGGCTGAGGCTCGTTCTTGTTGATCGGGCGCTTACCGGGATTCCCTCTGACAAGCTTCAGCTCCGt                            <  5:207076/149‑1 (MQ=255)                                                                                                                             aaGCAGCACCGTGAGC‑‑‑‑‑‑‑‑CGCCCCCACGCCACCTGGCCATCTGAGCTCAAGTGGTCGGGGGCGCTGGGAATGCGCTTAGCTGGCTGAGGCTCGTTCTTGTTGATCGGGCGCTTACCGGGATTCCCTCTGACAAGCTTCAGCTCCGTCGgtg                       >  6:148562/1‑149 (MQ=255)                                                                                                                              agcagcACCGTGAGC‑‑‑‑‑‑‑‑CGCCCCCACGCCACCTGGCCATCTGAGCTCAAGTGGTCGGGGGCGCTGGGAATGCGCTTAGCTGGCTGAGGCTCGTTCTTGTTGATCGGGCGCTTACCGGGATTCCCTCTGACAAGCTTCAGCTCCGTCGgtgt                      >  8:16313/1‑149 (MQ=255)                                                                                                                              agcagcACCGTGAGC‑‑‑‑‑‑‑‑CGCCCCCACGCCACCTGGCCATCTGAGCTCAAGTGGTCGGGGGCGCTGGGAATGCGCTTAGCTGGCTGAGGCTCGTTCTTGTTGATCGGGCGCTTACCGGGATTCCCTCTGACAAGCTTCAGCTCCGTCGgtgt                      <  3:60726/149‑1 (MQ=255)                                                                                                                              agcagcACCGTGAGC‑‑‑‑‑‑‑‑CGCCCCCACGCCACCTGGCCATCTGAGCTCAAGTGGTCGGGGGCGCTGGGAATGCGCTTAGCTGGCTGAGGCTCGTTCTTGTTGATCGGGCGCTTACCGGGATTCCCTCTGACAAGCTTCAGCTCCGTCGgtgt                      <  7:16313/149‑1 (MQ=255)                                                                                                                                cagcaCCGTGAGC‑‑‑‑‑‑‑‑CGCCCCCACGCCACCTGGCCATCTGAGCTCAAGTGGTCGGGGGCGCTGGGAATGCGCTTAGCTGGCTGAGGCTCGTTCTTGTTGATCGGGCGCTTACCGGGATTCCCTCTGACAAGCTTCAGCTCCGTCGGTGTgg                    <  5:380729/149‑1 (MQ=255)                                                                                                                                cagcaCCGTGAGC‑‑‑‑‑‑‑‑CGCCCCCACGCCACCTGGCCATCTGAGCTCAAGTGGTCGGGGGCGCTGGGAATGCGCTTAGCTGGCTGAGGCTCGTTCTTGTTGATCGGGCGCTTACCGGGATTCCCTCTGACAAGCTTCAGCTCCGGCGGTGTgg                    <  7:52463/149‑1 (MQ=255)                                                                                                                                 aggaCCGGGAGC‑‑‑‑‑‑‑‑CGCCCCCACGCCTCCTGGCCATCTGAGCTCAAGTGGTCGGGGGCGCTGGGAATGCGCTTAGCTGGCTGAGGCTCGTTCTTGTTGATCGGGCGCTTACCGGGATTCCCTCTGACAAGCTTCAGCTCCGTCGGTGTggg                   <  4:324696/146‑1 (MQ=255)                                                                                                                                        tGAGC‑‑‑‑‑‑‑‑CGCCCCCACGCCACCTGGCCATCTGAGCTCAAGTGGTCgggggcggctcacggtgctgcttgaccgcatgggtgtgcttaccgaggcagatggcttcgcgcttgagcgcctgtgcgactgctattccgaaatccttgcccttcg            <  7:365582‑M2/149‑107 (MQ=255)                                                                                                                                            c‑‑‑‑‑‑‑‑cgccCCCACGCCACCTGGCCATCTGAGCTCAAGTGGTCGGGGGCGCTGGGAATGCGCTTAGCTGGCTGAGGCTCGTTCTTGTTGATCGGGCGCTTACCGGGATTCCCTCTGACAAGCTTCAGCTCCGTCGGTGTGGGTCGTCTCCCgg        >  4:133036/1‑149 (MQ=255)                                                                                                                                                     cgccCCCACGCCACCTGGCCATCTGAGCTCAAGTGGTCgggggcggctcacggtgctgcttgaccgcatgggtgtgcttaccgaggcagatggcttcgcgcttgagcgcctgtgcgactgctattccgaaatccttgcccttcgtgacg       <  1:312014‑M2/149‑112 (MQ=255)                                                                                                                                                      gccCCCACGCCACCTGGCCATCTGAGCTCAAGTGGTCGGGGGCGCTGGGAATGCGCTTAGCTGGCTGAGGCTCGTTCTTGTTGATCGGGCGCTTACCGGGATTCCCTCTGACAAGCTTCAGCTCCGTCGGTGTGGGTCGTCTCCCGGcc      <  4:341825/149‑1 (MQ=255)                                                                                                                                                       cccccgaccacttgagctcagatggccaggtggcgtgggggcggctcacggtgctgcttgaccgcatgggtgtgcttaccgaggcagatggcttcgcgcttgagcgcctgtgcgactgctattccgaaatccttgcccttcgtgacgt      >  5:62404‑M1/1‑5 (MQ=255)                                                                                                                                                       cccccACGCCACCTGGCCATCTGAGCTCAAGTGGTCgggggcggctcacggtgctgcttgaccgcatgggtgtgcttaccgaggcagatggcttcgcgcttgagcgcctgtgcgactgctattccgaaatccttgcccttcgtgacgt      <  2:169006‑M2/148‑113 (MQ=255)                                                                                                                                                         cccACGCCACCTGGCCATCTGAGCTCAAGTGGTCGGGGGCGCTGGGAATGCGCTTAGCTGGCTGAGGCTCGTTCTTGTTGATCGGGCGCTTACCGGGATTCCCTCTGACAAGCTTCAGCTCCGTCGGTGTGGGTCGTCTCCCGGCCAtt   >  5:331619/1‑149 (MQ=255)                                                                                                                                                         cccACGCCACCTGGCCATCTGAGCTCAAGTGGTCGGGGGCGCTGGGAATGCGCTTAGCTGGCTGAGGCTCGTTCTTGTTGATCGGGCGCTTACCGGGATTCCCTCTGACAAGCTTCAGCTCCGTCGGTGTGGGTCGTCTCCCGGCCAtt   >  5:332598/1‑149 (MQ=255)                                                                                                                                                          ccgaccacttgagctcagatggccaggtggcgtgggggcggctcacggtgctgcttgaccgcatgggtgtgcttaccgaggcagatggcttcgcgcttgagcgcctgtgcgactgctattccgaaatccttgcccttcgtgacgtgatt  >  6:171235‑M1/1‑2 (MQ=255)                                                                                                                                                          ccgaccacttgagctcagatggccaggtggcgtgggggcggctcacggtgctgcttgaccgcatgggtgtgcttaccgaggcagatggcttcgcgcttgagcgcctgtgcgactgctattccgaaat                        >  7:132584‑M1/1‑2 (MQ=255)                                                                                                                                                          ccACGCCACCTGGCCATCTGAGCTCAAGTGGTCgggggcgtgggggcggctcacggtgctgcttgaccgcatgggtgtgcttaccgaggcagatggcttcgcgcttgagcgcctgtgcgactgctattccgaaatccttgcccttcgt   <  4:182692‑M2/148‑116 (MQ=255)                                                                                                                                                           |                                                                                                                                                    TGGTGGTTTCGTATGTGCGCCCCTGTTCGCCAATCACGTCACGAAGGGCAAGGATTTCGGAATAGCAGTCGCACAGGCGCTCAAGCGCGAAGCCATCTGCCTCGGTAAGCACACCCATGCGGTCAAGCAGCACCGTGAGC‑‑‑‑‑‑‑‑CGCCCCCACGCCACCTGGCCATCTGAGCTCAAGTGGTCGGGGGCGCTGGGAATGCGCTTAGCTGGCTGAGGCTCGTTCTTGTTGATCGGGCGCTTACCGGGATTCCCTCTGACAAGCTTCAGCTCCGTCGGTGTGGGTCGTCTCCCGGCCATTT  >  NC_002947/4403289‑4403582

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.